Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0967650 | sp|Q9FJD4|IMB1_ARATH | 79.517 | 869 | 177 | 1 | 1 | 869 | 3 | 870 | 0.0 | 1437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0967650 | A0A072V0X7 | 99.770 | 869 | 2 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1792 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012240 | Msa0967650 | -0.805889 | 1.073475e-49 | -8.615850e-47 |
| Msa0033160 | Msa0967650 | 0.816173 | 6.337173e-52 | -8.615850e-47 |
| Msa0049650 | Msa0967650 | 0.834536 | 2.831541e-56 | -8.615850e-47 |
| Msa0054730 | Msa0967650 | 0.824914 | 6.234221e-54 | -8.615850e-47 |
| Msa0054780 | Msa0967650 | -0.802818 | 4.683294e-49 | -8.615850e-47 |
| Msa0058210 | Msa0967650 | 0.878325 | 3.076662e-69 | -8.615850e-47 |
| Msa0058390 | Msa0967650 | 0.844174 | 8.902940e-59 | -8.615850e-47 |
| Msa0074900 | Msa0967650 | 0.821253 | 4.454933e-53 | -8.615850e-47 |
| Msa0090770 | Msa0967650 | 0.832546 | 8.885894e-56 | -8.615850e-47 |
| Msa0605170 | Msa0967650 | -0.800555 | 1.364272e-48 | -8.615850e-47 |
| Msa0607340 | Msa0967650 | 0.865087 | 7.614306e-65 | -8.615850e-47 |
| Msa0647450 | Msa0967650 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0654760 | Msa0967650 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa0661190 | Msa0967650 | 0.812018 | 5.234309e-51 | -8.615850e-47 |
| Msa0717920 | Msa0967650 | 0.832444 | 9.418625e-56 | -8.615850e-47 |
| Msa0738630 | Msa0967650 | 0.825108 | 5.610275e-54 | -8.615850e-47 |
| Msa0783760 | Msa0967650 | 0.833806 | 4.316300e-56 | -8.615850e-47 |
| Msa0813320 | Msa0967650 | 0.804821 | 1.797334e-49 | -8.615850e-47 |
| Msa0813720 | Msa0967650 | -0.805606 | 1.230953e-49 | -8.615850e-47 |
| Msa0818980 | Msa0967650 | 0.823475 | 1.358135e-53 | -8.615850e-47 |
| Msa0819030 | Msa0967650 | 0.815321 | 9.816432e-52 | -8.615850e-47 |
| Msa0138390 | Msa0967650 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa0138560 | Msa0967650 | 0.867171 | 1.665333e-65 | -8.615850e-47 |
| Msa0167210 | Msa0967650 | 0.834956 | 2.220754e-56 | -8.615850e-47 |
| Msa0173830 | Msa0967650 | -0.806619 | 7.532970e-50 | -8.615850e-47 |
| Msa0183640 | Msa0967650 | 0.860295 | 2.282309e-63 | -8.615850e-47 |
| Msa0196360 | Msa0967650 | 0.804207 | 2.412862e-49 | -8.615850e-47 |
| Msa0200010 | Msa0967650 | -0.811434 | 7.014564e-51 | -8.615850e-47 |
| Msa0226940 | Msa0967650 | 0.802722 | 4.901309e-49 | -8.615850e-47 |
| Msa0238070 | Msa0967650 | 0.820260 | 7.533405e-53 | -8.615850e-47 |
| Msa0376450 | Msa0967650 | 0.999438 | 1.084688e-311 | -8.615850e-47 |
| Msa0377970 | Msa0967650 | 0.813940 | 1.984097e-51 | -8.615850e-47 |
| Msa0378490 | Msa0967650 | -0.818233 | 2.181508e-52 | -8.615850e-47 |
| Msa0419310 | Msa0967650 | -0.890805 | 7.065839e-74 | -8.615850e-47 |
| Msa0425120 | Msa0967650 | 0.972223 | 2.043122e-134 | -8.615850e-47 |
| Msa0427620 | Msa0967650 | 0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0430620 | Msa0967650 | -0.821529 | 3.847537e-53 | -8.615850e-47 |
| Msa0465790 | Msa0967650 | -0.806033 | 1.001113e-49 | -8.615850e-47 |
| Msa0471720 | Msa0967650 | 0.999767 | 0.000000e+00 | -8.615850e-47 |
| Msa0472740 | Msa0967650 | -0.802068 | 6.686920e-49 | -8.615850e-47 |
| Msa0259860 | Msa0967650 | 0.807943 | 3.948523e-50 | -8.615850e-47 |
| Msa0260950 | Msa0967650 | 0.814966 | 1.177148e-51 | -8.615850e-47 |
| Msa0267310 | Msa0967650 | -0.816615 | 5.046842e-52 | -8.615850e-47 |
| Msa0267970 | Msa0967650 | -0.815673 | 8.193458e-52 | -8.615850e-47 |
| Msa0270030 | Msa0967650 | 0.825802 | 3.842890e-54 | -8.615850e-47 |
| Msa0280730 | Msa0967650 | -0.807433 | 5.067428e-50 | -8.615850e-47 |
| Msa0288420 | Msa0967650 | 0.812326 | 4.485039e-51 | -8.615850e-47 |
| Msa0315930 | Msa0967650 | 0.853336 | 2.555764e-61 | -8.615850e-47 |
| Msa0318250 | Msa0967650 | -0.809012 | 2.335012e-50 | -8.615850e-47 |
| Msa0352330 | Msa0967650 | -0.824230 | 9.032655e-54 | -8.615850e-47 |
| Msa0510350 | Msa0967650 | -0.803445 | 3.473741e-49 | -8.615850e-47 |
| Msa0516510 | Msa0967650 | 0.996353 | 1.883192e-226 | -8.615850e-47 |
| Msa0518130 | Msa0967650 | 0.813692 | 2.250218e-51 | -8.615850e-47 |
| Msa0553220 | Msa0967650 | 0.804864 | 1.760687e-49 | -8.615850e-47 |
| Msa0849510 | Msa0967650 | -0.821128 | 4.760299e-53 | -8.615850e-47 |
| Msa0867050 | Msa0967650 | 0.832433 | 9.479732e-56 | -8.615850e-47 |
| Msa0967650 | Msa1040110 | 0.833575 | 4.928272e-56 | -8.615850e-47 |
| Msa0967650 | Msa1072460 | 0.820132 | 8.061586e-53 | -8.615850e-47 |
| Msa0967650 | Msa1098180 | 0.812899 | 3.361118e-51 | -8.615850e-47 |
| Msa0967650 | Msa1119250 | 0.826572 | 2.521064e-54 | -8.615850e-47 |
| Msa0967650 | Msa1119300 | 0.842089 | 3.198579e-58 | -8.615850e-47 |
| Msa0967650 | Msa1138240 | 0.811316 | 7.442242e-51 | -8.615850e-47 |
| Msa0967650 | Msa1200880 | 0.813274 | 2.780738e-51 | -8.615850e-47 |
| Msa0967650 | Msa1215570 | 0.817248 | 3.639288e-52 | -8.615850e-47 |
| Msa0967650 | Msa1260130 | -0.820141 | 8.024198e-53 | -8.615850e-47 |
| Msa0967650 | Msa1279490 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0967650 | Msa1307010 | 0.822776 | 1.977130e-53 | -8.615850e-47 |
| Msa0967650 | Msa1307660 | 0.840119 | 1.053133e-57 | -8.615850e-47 |
| Msa0967650 | Msa1336950 | -0.821513 | 3.879779e-53 | -8.615850e-47 |
| Msa0967650 | Msa1351640 | 0.821819 | 3.296119e-53 | -8.615850e-47 |
| Msa0967650 | Msa1358610 | 0.837653 | 4.576944e-57 | -8.615850e-47 |
| Msa0967650 | Msa1361100 | -0.801292 | 9.643701e-49 | -8.615850e-47 |
| Msa0967650 | Msa1365700 | 0.837762 | 4.293130e-57 | -8.615850e-47 |
| Msa0967650 | Msa1375060 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
| Msa0967650 | Msa1384820 | 0.874947 | 4.532568e-68 | -8.615850e-47 |
| Msa0967650 | Msa1385770 | -0.811757 | 5.969097e-51 | -8.615850e-47 |
| Msa0967650 | Msa1392330 | 0.818939 | 1.508461e-52 | -8.615850e-47 |
| Msa0967650 | Msa1396750 | 0.838227 | 3.260266e-57 | -8.615850e-47 |
| Msa0967650 | Msa1403680 | -0.829120 | 6.147128e-55 | -8.615850e-47 |
| Msa0967650 | Msa1409240 | -0.810438 | 1.152723e-50 | -8.615850e-47 |
| Msa0967650 | Msa1410430 | 0.836723 | 7.918362e-57 | -8.615850e-47 |
| Msa0967650 | Msa1423580 | 0.804722 | 1.884278e-49 | -8.615850e-47 |
| Msa0967650 | Msa1434140 | -0.801528 | 8.627634e-49 | -8.615850e-47 |
| Msa0967650 | Msa1442160 | 0.837229 | 5.879255e-57 | -8.615850e-47 |
| Msa0967650 | Msa1449250 | 0.814922 | 1.203951e-51 | -8.615850e-47 |
| Msa0967650 | Msa1452090 | 0.847684 | 9.897499e-60 | -8.615850e-47 |
| Msa0967650 | Msa1453780 | 0.866359 | 3.020610e-65 | -8.615850e-47 |
| Msa0967650 | Msa1460630 | -0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa0967650 | Msa1460820 | 0.818007 | 2.453444e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0967650 | MtrunA17_Chr3g0127121 | 99.770 | 869 | 2 | 0 | 1 | 869 | 1 | 869 | 0.0 | 1792 |
| Msa0967650 | MtrunA17_Chr3g0127101 | 90.679 | 869 | 80 | 1 | 1 | 869 | 1 | 868 | 0.0 | 1591 |
| Msa0967650 | MtrunA17_Chr8g0388661 | 77.995 | 868 | 188 | 2 | 1 | 867 | 3 | 868 | 0.0 | 1427 |
| Msa0967650 | MtrunA17_Chr1g0178291 | 32.517 | 449 | 240 | 15 | 127 | 536 | 3 | 427 | 7.28e-40 | 156 |
| Msa0967650 | MtrunA17_Chr1g0211341 | 23.726 | 628 | 342 | 26 | 29 | 590 | 45 | 601 | 7.13e-21 | 98.6 |
| Msa0967650 | MtrunA17_Chr2g0277681 | 22.260 | 584 | 367 | 20 | 14 | 578 | 16 | 531 | 1.03e-12 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0967650 | AT5G53480.1 | 79.517 | 869 | 177 | 1 | 1 | 869 | 3 | 870 | 0.0 | 1437 |
| Msa0967650 | AT3G08947.1 | 57.099 | 655 | 276 | 5 | 213 | 865 | 1 | 652 | 0.0 | 747 |
| Msa0967650 | AT3G08947.2 | 59.386 | 586 | 233 | 5 | 213 | 796 | 1 | 583 | 0.0 | 700 |
| Msa0967650 | AT2G16950.2 | 24.503 | 604 | 331 | 23 | 46 | 590 | 61 | 598 | 1.27e-26 | 117 |
| Msa0967650 | AT2G16950.1 | 24.507 | 608 | 330 | 24 | 46 | 590 | 61 | 602 | 8.00e-26 | 115 |
Find 255 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTCTTGGTCTCTCTTTC+TGG | -0.012550 | 6_3:+97731894 | Msa0967650:CDS |
| CAGATCTCTTCTCCGATTTC+AGG | 0.165331 | 6_3:+97730406 | Msa0967650:five_prime_UTR |
| CTTGAACGTACTGGACTTAA+TGG | 0.190615 | 6_3:-97734686 | None:intergenic |
| CTCTCCAAGCCATTGAATTC+TGG | 0.197925 | 6_3:+97732615 | Msa0967650:CDS |
| AGAAAGTCTTCGGCAATTTC+AGG | 0.216352 | 6_3:+97731857 | Msa0967650:CDS |
| CTTGAAAGTACTGGACTTAA+TGG | 0.254879 | 6_3:-97734736 | None:intergenic |
| TGACAAAGACTGTTGAATTA+AGG | 0.267917 | 6_3:-97734370 | None:intergenic |
| GGGATATTAGAGGCATATTC+TGG | 0.268252 | 6_3:+97734078 | Msa0967650:CDS |
| GCATTTCCCTCATTAATAAT+AGG | 0.268484 | 6_3:-97733130 | None:intergenic |
| GACACCACTGCTTGGACTTT+GGG | 0.272684 | 6_3:+97733067 | Msa0967650:CDS |
| GCAAAACCTTCCTGGTTTCT+TGG | 0.279761 | 6_3:+97731881 | Msa0967650:CDS |
| CAGCCTTTCTCAGCAACATT+AGG | 0.287721 | 6_3:-97733196 | None:intergenic |
| TCCCCACATTCTCCAGTTCT+TGG | 0.294606 | 6_3:+97734155 | Msa0967650:CDS |
| ACTAGAGCACTGAGCATAAA+TGG | 0.300642 | 6_3:-97733019 | None:intergenic |
| CAAGTTGTTGCTAAAATTGC+TGG | 0.301501 | 6_3:+97732125 | Msa0967650:CDS |
| GTTTCTTGGTCTCTCTTTCT+GGG | 0.305155 | 6_3:+97731895 | Msa0967650:CDS |
| TACATTAACTCTTTGAGAAA+TGG | 0.314718 | 6_3:+97734057 | Msa0967650:CDS |
| GGCAGGTATTTAGCAAAATC+AGG | 0.324114 | 6_3:-97733703 | None:intergenic |
| ATACTGCAAGAGAACATATT+TGG | 0.329593 | 6_3:-97733575 | None:intergenic |
| TCAAGAAACTTGTAAAATTC+AGG | 0.332719 | 6_3:-97733724 | None:intergenic |
| AGACACCACTGCTTGGACTT+TGG | 0.341617 | 6_3:+97733066 | Msa0967650:CDS |
| AACTTATAGGCCTTCTTTGT+GGG | 0.345240 | 6_3:+97733509 | Msa0967650:CDS |
| GCTTCCCTCTGTCTCCAATC+TGG | 0.354117 | 6_3:-97732920 | None:intergenic |
| GCAGTATGCTGATCAGATAA+TGG | 0.356944 | 6_3:+97733591 | Msa0967650:CDS |
| TTTCAGGAGCAAAACCTTCC+TGG | 0.362971 | 6_3:+97731873 | Msa0967650:CDS |
| ATAAACTACTTGCATGCATT+TGG | 0.372420 | 6_3:+97734524 | Msa0967650:three_prime_UTR |
| ATTCTTACTGCTGTAGTTCA+AGG | 0.372529 | 6_3:+97732308 | Msa0967650:CDS |
| TTTGAGAAATGGGATATTAG+AGG | 0.373265 | 6_3:+97734068 | Msa0967650:CDS |
| AACAGATATAGCACGATTGA+TGG | 0.383244 | 6_3:-97734469 | None:intergenic |
| GGGTGTGTCGAGGTGGGTCG+TGG | 0.383683 | 6_3:+97734545 | Msa0967650:three_prime_UTR |
| GAAGAAGAGCGAAGGAAGGA+AGG | 0.384641 | 6_3:-97730347 | None:intergenic |
| AACAGATGAAACAGCTCCTT+TGG | 0.387973 | 6_3:+97733396 | Msa0967650:CDS |
| AGCCTTTCTCAGCAACATTA+GGG | 0.389846 | 6_3:-97733195 | None:intergenic |
| TAAACTACTTGCATGCATTT+GGG | 0.392888 | 6_3:+97734525 | Msa0967650:three_prime_UTR |
| GGTTTAGTTGCTCGTACTAC+TGG | 0.395020 | 6_3:+97732845 | Msa0967650:CDS |
| GAACTTATAGGCCTTCTTTG+TGG | 0.395988 | 6_3:+97733508 | Msa0967650:CDS |
| GGAGAACTGTAATAATTTGT+TGG | 0.397331 | 6_3:-97733153 | None:intergenic |
| ACATCACAGCAAAGGCTGTT+AGG | 0.397636 | 6_3:+97732573 | Msa0967650:CDS |
| GTATGCATTTGGCTCTATCT+TGG | 0.398069 | 6_3:+97732949 | Msa0967650:CDS |
| GTATCAAACCTGCCAACTTT+CGG | 0.403548 | 6_3:-97731950 | None:intergenic |
| GCCAACTTTCGGCTATCAAC+TGG | 0.406087 | 6_3:-97731939 | None:intergenic |
| TACTCCAGAATTCAATGGCT+TGG | 0.406106 | 6_3:-97732619 | None:intergenic |
| CCTCTGTCTCCAATCTGGTT+TGG | 0.406779 | 6_3:-97732915 | None:intergenic |
| TGAAAACAGAAAGCGGGAAT+TGG | 0.407494 | 6_3:+97731998 | Msa0967650:CDS |
| TTTCTTCACAGTTCAATTGT+TGG | 0.411323 | 6_3:+97733103 | Msa0967650:CDS |
| TGCAGCGAAGGCCCAGGTTA+AGG | 0.412867 | 6_3:+97732046 | Msa0967650:CDS |
| GCAAGCAACTTTGGAGACTC+TGG | 0.414579 | 6_3:+97732229 | Msa0967650:CDS |
| GAGCATAAGGAATCAAGATC+TGG | 0.417948 | 6_3:-97734134 | None:intergenic |
| GTGTAGTCGGCGACATATGC+AGG | 0.418380 | 6_3:+97733797 | Msa0967650:CDS |
| GAGGAGGCCATGCTAGCTAT+TGG | 0.419964 | 6_3:+97733658 | Msa0967650:CDS |
| ACAAGAGGTACTAATTTGTC+TGG | 0.420575 | 6_3:-97732983 | None:intergenic |
| CTTACGTACAGTTCCGTCAA+TGG | 0.421548 | 6_3:-97731826 | None:intergenic |
| ACATTAACTCTTTGAGAAAT+GGG | 0.422715 | 6_3:+97734058 | Msa0967650:CDS |
| AATAGTGATCCTATCAGTTC+AGG | 0.424523 | 6_3:-97732173 | None:intergenic |
| AGCACGATTGATGGCCAACT+TGG | 0.424564 | 6_3:-97734460 | None:intergenic |
| GAGAACTGTAATAATTTGTT+GGG | 0.427273 | 6_3:-97733152 | None:intergenic |
| TGCACTCGTCCCTCTGCTGT+TGG | 0.428521 | 6_3:+97732742 | Msa0967650:CDS |
| ATGCAAGAGTTAGTGACAAC+TGG | 0.431951 | 6_3:-97734629 | None:intergenic |
| TGTATATGCTATCCAAGAAC+TGG | 0.432522 | 6_3:-97734167 | None:intergenic |
| TGATGAAGAGACTGATATCT+TGG | 0.432783 | 6_3:+97732649 | Msa0967650:CDS |
| CTTCTTCCTCTTGAAAGTAC+TGG | 0.433674 | 6_3:-97734745 | None:intergenic |
| TCAATGGCTTGGAGAGCAAC+AGG | 0.436583 | 6_3:-97732608 | None:intergenic |
| ATGTCAGACTTGCTGCTGCC+AGG | 0.436780 | 6_3:+97732357 | Msa0967650:CDS |
| CAGTATGCTGATCAGATAAT+GGG | 0.437742 | 6_3:+97733592 | Msa0967650:CDS |
| TGGAGAATGTGGGGAGCATA+AGG | 0.441829 | 6_3:-97734147 | None:intergenic |
| AACAGCAGAGGGACGAGTGC+AGG | 0.444736 | 6_3:-97732740 | None:intergenic |
| AATCGTGCTATATCTGTTTG+AGG | 0.448881 | 6_3:+97734474 | Msa0967650:CDS |
| GAAGCAGCGACGTATGCATT+TGG | 0.449296 | 6_3:+97732938 | Msa0967650:CDS |
| TCATGTCAAGCAAGCAACTT+TGG | 0.450868 | 6_3:+97732220 | Msa0967650:CDS |
| GAAGCAAACATGCCTTAACC+TGG | 0.450881 | 6_3:-97732058 | None:intergenic |
| ACAGTCATTATTCAGAAGCT+AGG | 0.451708 | 6_3:+97733538 | Msa0967650:CDS |
| TTGAATGCTCAATCCATTGA+CGG | 0.452532 | 6_3:+97731813 | Msa0967650:CDS |
| GTCTTGATCAACAACCTCAT+GGG | 0.455712 | 6_3:-97732273 | None:intergenic |
| TGCATTTGGCTCTATCTTGG+AGG | 0.457960 | 6_3:+97732952 | Msa0967650:CDS |
| GCTTGACATGAGCAGGAACT+TGG | 0.460430 | 6_3:-97732208 | None:intergenic |
| GATGGCCAACTTGGCCCATT+CGG | 0.460803 | 6_3:-97734451 | None:intergenic |
| TTGATGAATTCTTAAACCCT+TGG | 0.462813 | 6_3:-97734107 | None:intergenic |
| AATTGTACTCCAGAATTCAA+TGG | 0.464626 | 6_3:-97732624 | None:intergenic |
| AACCCTGGGCGAGAAAATAC+AGG | 0.464646 | 6_3:-97733225 | None:intergenic |
| CGCCCAGGGTTATGAGGATG+TGG | 0.470202 | 6_3:+97733237 | Msa0967650:CDS |
| TCCTGAATTGAAAATACGTC+TGG | 0.474094 | 6_3:+97732475 | Msa0967650:CDS |
| TTATATATGTCCTGGATGTA+AGG | 0.474321 | 6_3:-97732551 | None:intergenic |
| AACTGAAAGTATCTGTTTGA+AGG | 0.474424 | 6_3:+97734602 | Msa0967650:three_prime_UTR |
| GAGATGTACGCCCACACATC+AGG | 0.474951 | 6_3:+97734012 | Msa0967650:CDS |
| ACAAGAAGAGGATCAAGATC+TGG | 0.475193 | 6_3:+97732778 | Msa0967650:CDS |
| GATACACTTGGAAGCAATGC+TGG | 0.475465 | 6_3:+97734345 | Msa0967650:CDS |
| CTCTGTGGGTGACAGTGAGA+AGG | 0.475830 | 6_3:-97733306 | None:intergenic |
| AAACAGTGGCCTGAACTGAT+AGG | 0.477544 | 6_3:+97732164 | Msa0967650:CDS |
| AGATAATGGGACTATTCATC+CGG | 0.478120 | 6_3:+97733605 | Msa0967650:CDS |
| AAAATATTCCCTTACTGTGA+TGG | 0.478884 | 6_3:+97733832 | Msa0967650:CDS |
| AAATATTCCCTTACTGTGAT+GGG | 0.479316 | 6_3:+97733833 | Msa0967650:CDS |
| GTCATAATCCCATCACAGTA+AGG | 0.480569 | 6_3:-97733841 | None:intergenic |
| CGACATATGCAGGGCATTGG+AGG | 0.480820 | 6_3:+97733807 | Msa0967650:CDS |
| CATGGCCTCCTCATGGGCAG+TGG | 0.481836 | 6_3:-97733647 | None:intergenic |
| GATTAAAGAATCTGCCGAAT+GGG | 0.485471 | 6_3:+97734437 | Msa0967650:CDS |
| GCATTTGGCTCTATCTTGGA+GGG | 0.486868 | 6_3:+97732953 | Msa0967650:CDS |
| CAGAGGGACGAGTGCAGGAA+GGG | 0.487738 | 6_3:-97732735 | None:intergenic |
| GAATATGTGGGTGATACCAC+TGG | 0.488697 | 6_3:+97732674 | Msa0967650:CDS |
| TGCAAAGGTCAGTGATGCAT+TGG | 0.488912 | 6_3:-97734657 | None:intergenic |
| CAACAGTTACGGCACAAACT+TGG | 0.489107 | 6_3:-97733774 | None:intergenic |
| GTCCCTAATGTTGCTGAGAA+AGG | 0.491608 | 6_3:+97733193 | Msa0967650:CDS |
| CGGCGACATATGCAGGGCAT+TGG | 0.493884 | 6_3:+97733804 | Msa0967650:CDS |
| GAGAGAAGAAGAGCGAAGGA+AGG | 0.498995 | 6_3:-97730351 | None:intergenic |
| AGAATATTACCAAACCAGAT+TGG | 0.501979 | 6_3:+97732906 | Msa0967650:CDS |
| GTTGATAGCCGAAAGTTGGC+AGG | 0.503864 | 6_3:+97731942 | Msa0967650:CDS |
| CTGTGATGTTATATATGTCC+TGG | 0.504029 | 6_3:-97732559 | None:intergenic |
| GGTCTTGATCAACAACCTCA+TGG | 0.504483 | 6_3:-97732274 | None:intergenic |
| TGGCACACCTATTATTAATG+AGG | 0.506178 | 6_3:+97733123 | Msa0967650:CDS |
| GCGATGAAGATACCTGAAAT+CGG | 0.506359 | 6_3:-97730418 | None:intergenic |
| GAGCACTGAGCATAAATGGT+AGG | 0.506623 | 6_3:-97733015 | None:intergenic |
| CCTCTCTTGTACTTGACGCT+CGG | 0.507603 | 6_3:+97732090 | Msa0967650:CDS |
| GGTGATATAGCACTAGCTAT+AGG | 0.507802 | 6_3:+97733934 | Msa0967650:CDS |
| GCCGACTACACCAACAGTTA+CGG | 0.508961 | 6_3:-97733785 | None:intergenic |
| GTTGCTTGCTTGACATGAGC+AGG | 0.509107 | 6_3:-97732215 | None:intergenic |
| GCATATTCTGGGATCTTCCA+AGG | 0.514404 | 6_3:+97734090 | Msa0967650:CDS |
| ATCTGCCGAATGGGCCAAGT+TGG | 0.515537 | 6_3:+97734446 | Msa0967650:CDS |
| AGCTAGCATGGCCTCCTCAT+GGG | 0.516971 | 6_3:-97733653 | None:intergenic |
| TGATGCATTCTTGAACGTAC+TGG | 0.518086 | 6_3:-97734695 | None:intergenic |
| ACTTGTAATGCCTTTCATTG+AGG | 0.519790 | 6_3:+97732883 | Msa0967650:CDS |
| CCACACATCAGGCTTTGACT+TGG | 0.521208 | 6_3:+97734023 | Msa0967650:CDS |
| TGTCAGACTTGCTGCTGCCA+GGG | 0.521590 | 6_3:+97732358 | Msa0967650:CDS |
| ATGGCAGGTGGTACATGCCT+TGG | 0.523405 | 6_3:+97732824 | Msa0967650:CDS |
| AGCATGCTGAAGAAAGTCTT+CGG | 0.523420 | 6_3:+97731847 | Msa0967650:CDS |
| GGATATTAGAGGCATATTCT+GGG | 0.524280 | 6_3:+97734079 | Msa0967650:CDS |
| GTGTCTTTAACATGGTTGCT+TGG | 0.524596 | 6_3:-97733049 | None:intergenic |
| GGTGTGTCGAGGTGGGTCGT+GGG | 0.526216 | 6_3:+97734546 | Msa0967650:three_prime_UTR |
| ACCAGTTGATAGCCGAAAGT+TGG | 0.526677 | 6_3:+97731938 | Msa0967650:CDS |
| GTAATATTCTCCTCAATGAA+AGG | 0.527093 | 6_3:-97732893 | None:intergenic |
| TCTGTGGGTGACAGTGAGAA+GGG | 0.528574 | 6_3:-97733305 | None:intergenic |
| TAGCTAGCATGGCCTCCTCA+TGG | 0.530327 | 6_3:-97733654 | None:intergenic |
| AAGAGCGAAGGAAGGAAGGA+AGG | 0.530445 | 6_3:-97730343 | None:intergenic |
| ATCACCAATGCATGAAAACA+AGG | 0.531126 | 6_3:-97733917 | None:intergenic |
| TGATATCTTGGAAGAATATG+TGG | 0.534358 | 6_3:+97732661 | Msa0967650:CDS |
| GAAAGAGAGACCAAGAAACC+AGG | 0.534523 | 6_3:-97731891 | None:intergenic |
| CAAGCAACTTTGGAGACTCT+GGG | 0.535824 | 6_3:+97732230 | Msa0967650:CDS |
| AAAACAGCCATTGGTGTCGT+TGG | 0.535827 | 6_3:+97734312 | Msa0967650:CDS |
| AGTAATGTTTCCAACAGCAG+AGG | 0.542094 | 6_3:-97732752 | None:intergenic |
| TACTTTCAGTTGTCTGACCA+TGG | 0.542225 | 6_3:-97734590 | None:intergenic |
| CAGTCATTATTCAGAAGCTA+GGG | 0.543317 | 6_3:+97733539 | Msa0967650:CDS |
| GAGATCTGAAAGAGTAGCGA+GGG | 0.545164 | 6_3:-97730391 | None:intergenic |
| AACATTACTCAAACAAGAAG+AGG | 0.546231 | 6_3:+97732766 | Msa0967650:CDS |
| GTCATTAGACACTGCAGCGA+AGG | 0.546662 | 6_3:+97732034 | Msa0967650:CDS |
| GGACATCCTTCATGCTCTGA+AGG | 0.549506 | 6_3:-97733174 | None:intergenic |
| GGCACACCTATTATTAATGA+GGG | 0.549827 | 6_3:+97733124 | Msa0967650:CDS |
| ACACCACTGCTTGGACTTTG+GGG | 0.550181 | 6_3:+97733068 | Msa0967650:CDS |
| TTCCCACATCCTCATAACCC+TGG | 0.550647 | 6_3:-97733240 | None:intergenic |
| ATGTTAAAGACACCACTGCT+TGG | 0.550791 | 6_3:+97733059 | Msa0967650:CDS |
| CACATAATACATGGCCGCAA+TGG | 0.551428 | 6_3:-97732519 | None:intergenic |
| AGACACTGCAGCGAAGGCCC+AGG | 0.552156 | 6_3:+97732040 | Msa0967650:CDS |
| GCCGTAACTGTTGGTGTAGT+CGG | 0.552927 | 6_3:+97733784 | Msa0967650:CDS |
| TGCATTTGGGTGTGTCGAGG+TGG | 0.554275 | 6_3:+97734538 | Msa0967650:three_prime_UTR |
| ACTAGTTTCTGTCATCATGA+TGG | 0.555623 | 6_3:+97733426 | Msa0967650:CDS |
| CTGTCAAGCACCCACAAAGA+AGG | 0.556847 | 6_3:-97733519 | None:intergenic |
| CTCCGTAGCATCCTCTCTGT+GGG | 0.557611 | 6_3:-97733320 | None:intergenic |
| CATTTGGCTCTATCTTGGAG+GGG | 0.558186 | 6_3:+97732954 | Msa0967650:CDS |
| GAGGATCAAGATCTGGATGA+AGG | 0.560543 | 6_3:+97732785 | Msa0967650:CDS |
| TATCCAAGAACTGGAGAATG+TGG | 0.561174 | 6_3:-97734158 | None:intergenic |
| AAGGGCTCCAATAGCTAGCA+TGG | 0.562861 | 6_3:-97733665 | None:intergenic |
| GAAGTTGGCTCCTTACATCC+AGG | 0.563506 | 6_3:+97732541 | Msa0967650:CDS |
| TCCCACATCCTCATAACCCT+GGG | 0.563687 | 6_3:-97733239 | None:intergenic |
| AGCATAAGGAATCAAGATCT+GGG | 0.564981 | 6_3:-97734133 | None:intergenic |
| AGCGGGAATTGGTTCAGAGA+TGG | 0.567281 | 6_3:+97732009 | Msa0967650:CDS |
| TTTCTTGGTCTCTCTTTCTG+GGG | 0.568371 | 6_3:+97731896 | Msa0967650:CDS |
| CATAGCGATGGAAGTTACTC+AGG | 0.569430 | 6_3:+97731785 | Msa0967650:exon |
| ATGAGAGAGAAGAAGAGCGA+AGG | 0.571053 | 6_3:-97730355 | None:intergenic |
| AATGTTGCTGAGAAAGGCTG+TGG | 0.571738 | 6_3:+97733199 | Msa0967650:CDS |
| AGTTCTCCTTCAGAGCATGA+AGG | 0.572114 | 6_3:+97733168 | Msa0967650:CDS |
| AGTTCAGGCCACTGTTTCTG+AGG | 0.572502 | 6_3:-97732158 | None:intergenic |
| GCAGAGGGACGAGTGCAGGA+AGG | 0.572612 | 6_3:-97732736 | None:intergenic |
| GAAACTTGTAAAATTCAGGC+AGG | 0.572839 | 6_3:-97733720 | None:intergenic |
| CAAGGATGAAAACAGAAAGC+GGG | 0.572936 | 6_3:+97731992 | Msa0967650:CDS |
| GTTCTTGGATAGCATATACA+TGG | 0.572950 | 6_3:+97734170 | Msa0967650:CDS |
| TGATTAAAGAATCTGCCGAA+TGG | 0.574297 | 6_3:+97734436 | Msa0967650:CDS |
| CCAAACCAGATTGGAGACAG+AGG | 0.578424 | 6_3:+97732915 | Msa0967650:CDS |
| CATATTCTGGGATCTTCCAA+GGG | 0.579806 | 6_3:+97734091 | Msa0967650:CDS |
| TAATGCTCTCGAATTTGCGC+AGG | 0.579901 | 6_3:+97732388 | Msa0967650:CDS |
| ACTCCGTAGCATCCTCTCTG+TGG | 0.580534 | 6_3:-97733321 | None:intergenic |
| CAAGTCAAAGCCTGATGTGT+GGG | 0.580869 | 6_3:-97734022 | None:intergenic |
| GCATTTGGGTGTGTCGAGGT+GGG | 0.581701 | 6_3:+97734539 | Msa0967650:three_prime_UTR |
| ATCCAAGAACTGGAGAATGT+GGG | 0.582057 | 6_3:-97734157 | None:intergenic |
| GGTACTAATTTGTCTGGAGA+AGG | 0.583117 | 6_3:-97732977 | None:intergenic |
| CAGGGCCTATCGCATAGGCA+AGG | 0.584847 | 6_3:-97733684 | None:intergenic |
| GGTACTCCTCAAAATTCTGA+AGG | 0.586729 | 6_3:-97733753 | None:intergenic |
| CAATCGCAAGTAGAGATGCC+AGG | 0.587827 | 6_3:-97730309 | None:intergenic |
| GGAGCCCTTGCCTATGCGAT+AGG | 0.588549 | 6_3:+97733679 | Msa0967650:CDS |
| TGAATGTTTGGTCTCCATTG+CGG | 0.588682 | 6_3:+97732505 | Msa0967650:CDS |
| AGCCAACTTCACATAATACA+TGG | 0.590438 | 6_3:-97732528 | None:intergenic |
| TCATAATCCCATCACAGTAA+GGG | 0.590523 | 6_3:-97733840 | None:intergenic |
| AGCACTGAGCATAAATGGTA+GGG | 0.592192 | 6_3:-97733014 | None:intergenic |
| AAGATCTGGATGAAGGTGCA+TGG | 0.593145 | 6_3:+97732792 | Msa0967650:CDS |
| AAAATCAGGGCCTATCGCAT+AGG | 0.593832 | 6_3:-97733689 | None:intergenic |
| AGGGCCTATCGCATAGGCAA+GGG | 0.594941 | 6_3:-97733683 | None:intergenic |
| TCTGAAAGAGTAGCGAGGGA+AGG | 0.596629 | 6_3:-97730387 | None:intergenic |
| TTTAATCATATGATCATCTG+AGG | 0.597486 | 6_3:-97734421 | None:intergenic |
| GGCCATGTATTATGTGAAGT+TGG | 0.601747 | 6_3:+97732526 | Msa0967650:CDS |
| ATTGTTATGAAAACAGCCAT+TGG | 0.603401 | 6_3:+97734303 | Msa0967650:CDS |
| TTAAGTCCAGTACTTTCAAG+AGG | 0.603890 | 6_3:+97734739 | Msa0967650:three_prime_UTR |
| GAGAGCATTATACAATGCCC+TGG | 0.604361 | 6_3:-97732375 | None:intergenic |
| CCACTGCTTGGACTTTGGGG+CGG | 0.604774 | 6_3:+97733071 | Msa0967650:CDS |
| CATTTCTACAAGCAAAGACC+CGG | 0.606986 | 6_3:-97733624 | None:intergenic |
| GCATGGAATATTGCAATGGC+AGG | 0.607121 | 6_3:+97732809 | Msa0967650:CDS |
| CCGAGCGTCAAGTACAAGAG+AGG | 0.607157 | 6_3:-97732090 | None:intergenic |
| AAGCAGTGGTGTCTTTAACA+TGG | 0.611461 | 6_3:-97733057 | None:intergenic |
| GATAATGGGACTATTCATCC+GGG | 0.613080 | 6_3:+97733606 | Msa0967650:CDS |
| CACCAATGCATGAAAACAAG+GGG | 0.613111 | 6_3:-97733915 | None:intergenic |
| CAAGTTTGTGCCGTAACTGT+TGG | 0.613695 | 6_3:+97733775 | Msa0967650:CDS |
| TCACCAATGCATGAAAACAA+GGG | 0.614256 | 6_3:-97733916 | None:intergenic |
| GCAGGTATTTAGCAAAATCA+GGG | 0.614526 | 6_3:-97733702 | None:intergenic |
| CCAAGGATGAAAACAGAAAG+CGG | 0.615724 | 6_3:+97731991 | Msa0967650:CDS |
| ATGCAAGTAGTTTATGACAA+AGG | 0.616263 | 6_3:-97734516 | None:intergenic |
| TATGCTCAGTGCTCTAGTGA+AGG | 0.618237 | 6_3:+97733024 | Msa0967650:CDS |
| AAGCAAACATGCCTTAACCT+GGG | 0.618785 | 6_3:-97732057 | None:intergenic |
| AATATGTGGGTGATACCACT+GGG | 0.618894 | 6_3:+97732675 | Msa0967650:CDS |
| ACTTAATGGTGCTCATGCAA+AGG | 0.619089 | 6_3:-97734672 | None:intergenic |
| CACCCACAGAGAGGATGCTA+CGG | 0.620015 | 6_3:+97733318 | Msa0967650:CDS |
| TGCAAGAGAACATATTTGGT+AGG | 0.622823 | 6_3:-97733571 | None:intergenic |
| TAGAAATGCCACTGCCCATG+AGG | 0.623921 | 6_3:+97733639 | Msa0967650:CDS |
| TCCAAGAACTGGAGAATGTG+GGG | 0.625954 | 6_3:-97734156 | None:intergenic |
| CCAAGTCAAAGCCTGATGTG+TGG | 0.626187 | 6_3:-97734023 | None:intergenic |
| CATATATAACATCACAGCAA+AGG | 0.628146 | 6_3:+97732565 | Msa0967650:CDS |
| TAGATCTCCAACGACACCAA+TGG | 0.633027 | 6_3:-97734319 | None:intergenic |
| GAGAGGATGCTACGGAGTCA+CGG | 0.633129 | 6_3:+97733326 | Msa0967650:CDS |
| GTAATGTTTCCAACAGCAGA+GGG | 0.633616 | 6_3:-97732751 | None:intergenic |
| GAGAGACCAAGAAACCAGGA+AGG | 0.634178 | 6_3:-97731887 | None:intergenic |
| CATGTGTCAAATTGTCTCCA+TGG | 0.634249 | 6_3:+97734573 | Msa0967650:three_prime_UTR |
| GAAACTAGTTGCAACACCAA+AGG | 0.635429 | 6_3:-97733412 | None:intergenic |
| AAAGGCTGTTAGGAGTGATG+AGG | 0.635593 | 6_3:+97732583 | Msa0967650:CDS |
| GCATGCATTTGGGTGTGTCG+AGG | 0.637611 | 6_3:+97734535 | Msa0967650:three_prime_UTR |
| AAATGCCACTGCCCATGAGG+AGG | 0.637700 | 6_3:+97733642 | Msa0967650:CDS |
| TCTTGATCAACAACCTCATG+GGG | 0.640057 | 6_3:-97732272 | None:intergenic |
| TGGAATATTGCAATGGCAGG+TGG | 0.641007 | 6_3:+97732812 | Msa0967650:CDS |
| GGAGATCTAGCTGATACACT+TGG | 0.641148 | 6_3:+97734333 | Msa0967650:CDS |
| TTGAGCTTCCTCAGAAACAG+TGG | 0.646805 | 6_3:+97732150 | Msa0967650:CDS |
| TGTAGTCGGCGACATATGCA+GGG | 0.652462 | 6_3:+97733798 | Msa0967650:CDS |
| GACTCTGGGGTATTTGTGTG+AGG | 0.657648 | 6_3:+97732244 | Msa0967650:CDS |
| CAAACCAGATTGGAGACAGA+GGG | 0.659105 | 6_3:+97732916 | Msa0967650:CDS |
| GCCCAGGGTTATGAGGATGT+GGG | 0.661982 | 6_3:+97733238 | Msa0967650:CDS |
| AGAGATCTGAAAGAGTAGCG+AGG | 0.664338 | 6_3:-97730392 | None:intergenic |
| TCAATGAAAGGCATTACAAG+TGG | 0.666073 | 6_3:-97732881 | None:intergenic |
| GATATCTTGGAAGAATATGT+GGG | 0.670018 | 6_3:+97732662 | Msa0967650:CDS |
| CATCAGGTATAGCATAGCGA+TGG | 0.670697 | 6_3:+97731773 | Msa0967650:intron |
| ACCCTGGGCGAGAAAATACA+GGG | 0.671132 | 6_3:-97733224 | None:intergenic |
| CCGCCCCAAAGTCCAAGCAG+TGG | 0.671300 | 6_3:-97733071 | None:intergenic |
| GAAACAAAACGAGTATGACC+TGG | 0.672463 | 6_3:+97730291 | None:intergenic |
| GGTAGGGCGTGATTAACAAG+AGG | 0.685210 | 6_3:-97732998 | None:intergenic |
| ACCAATGCATGAAAACAAGG+GGG | 0.694702 | 6_3:-97733914 | None:intergenic |
| CCAATGCATGAAAACAAGGG+GGG | 0.695534 | 6_3:-97733913 | None:intergenic |
| AAGCAACTTTGGAGACTCTG+GGG | 0.702950 | 6_3:+97732231 | Msa0967650:CDS |
| AGGTGCATGGAATATTGCAA+TGG | 0.707284 | 6_3:+97732805 | Msa0967650:CDS |
| TAGTACGAGCAACTAAACCA+AGG | 0.708913 | 6_3:-97732841 | None:intergenic |
| TCTCACTGTCACCCACAGAG+AGG | 0.716309 | 6_3:+97733309 | Msa0967650:CDS |
| CTTGATCAACAACCTCATGG+GGG | 0.733599 | 6_3:-97732271 | None:intergenic |
| AGGAAGGAAGGAAGGAACAG+CGG | 0.735032 | 6_3:-97730335 | None:intergenic |
| AGGTATATCAGAGTCCCCAG+TGG | 0.773955 | 6_3:-97732690 | None:intergenic |
| ATATGTGGGTGATACCACTG+GGG | 0.840024 | 6_3:+97732676 | Msa0967650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTAAATCCTAAAATTT+CGG | + | chr6_3:97730858-97730877 | Msa0967650:intron | 10.0% |
| !!! | ATACAAAATATGTTATTTAA+TGG | - | chr6_3:97731212-97731231 | None:intergenic | 10.0% |
| !! | ATTTATTAACTGTAAAATAA+TGG | + | chr6_3:97731644-97731663 | Msa0967650:intron | 10.0% |
| !! | TAAAAATTAAGAAAAACAAA+AGG | - | chr6_3:97731705-97731724 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTACTTTAAAG+TGG | + | chr6_3:97731724-97731743 | Msa0967650:intron | 10.0% |
| !! | ATAGTATTTATGAAATTACA+TGG | + | chr6_3:97730690-97730709 | Msa0967650:intron | 15.0% |
| !! | TTATTAAATCCTAAAATTTC+GGG | + | chr6_3:97730859-97730878 | Msa0967650:intron | 15.0% |
| !!! | TCATTTTTTCAAATTTTTAC+CGG | + | chr6_3:97730987-97731006 | Msa0967650:intron | 15.0% |
| !! | TATTGCTATGAAAATTAAAT+TGG | - | chr6_3:97734231-97734250 | None:intergenic | 15.0% |
| !!! | AATTTTTGTTTATGCGATTT+AGG | + | chr6_3:97730514-97730533 | Msa0967650:intron | 20.0% |
| !! | ATTTATGAAATTACATGGAA+TGG | + | chr6_3:97730695-97730714 | Msa0967650:intron | 20.0% |
| !!! | GAATAGTTATTTATTTTCTG+TGG | + | chr6_3:97730758-97730777 | Msa0967650:intron | 20.0% |
| !! | GAAACATATTTGATGTTAAT+AGG | + | chr6_3:97731135-97731154 | Msa0967650:intron | 20.0% |
| !!! | AAATGTTTTTAATGATTCGA+CGG | + | chr6_3:97731460-97731479 | Msa0967650:intron | 20.0% |
| !! | AACAAAGCAATATATAAAGA+TGG | - | chr6_3:97731587-97731606 | None:intergenic | 20.0% |
| !! | TTTGATACTTAAAAATGCAT+TGG | + | chr6_3:97731965-97731984 | Msa0967650:CDS | 20.0% |
| !!! | CAGTAAGAATTTTATTTACT+TGG | - | chr6_3:97732298-97732317 | None:intergenic | 20.0% |
| !! | TGCTTAATGAAATAAAAACA+AGG | - | chr6_3:97732713-97732732 | None:intergenic | 20.0% |
| ! | TAACACCAGAAAAGTAAAAT+CGG | - | chr6_3:97730483-97730502 | None:intergenic | 25.0% |
| !!! | TTGGACAGTTTTAATTTATC+AGG | + | chr6_3:97730736-97730755 | Msa0967650:intron | 25.0% |
| !! | TGATTAGATGAAGTGAATTT+TGG | + | chr6_3:97730828-97730847 | Msa0967650:intron | 25.0% |
| ! | CTTCAAGGTTAATATCATAT+TGG | + | chr6_3:97731078-97731097 | Msa0967650:intron | 25.0% |
| !! | GTAAAAAGTTTTTACACTGT+CGG | + | chr6_3:97731386-97731405 | Msa0967650:intron | 25.0% |
| !!! | AATGTTTTTAATGATTCGAC+GGG | + | chr6_3:97731461-97731480 | Msa0967650:intron | 25.0% |
| ! | GTAAAATTTCATTACACTGA+CGG | + | chr6_3:97731501-97731520 | Msa0967650:intron | 25.0% |
| ! | ATTCTTATAAAATTCTCCGA+CGG | + | chr6_3:97731538-97731557 | Msa0967650:intron | 25.0% |
| !! | AGTATATTGTTGTTATAGTG+TGG | + | chr6_3:97731561-97731580 | Msa0967650:intron | 25.0% |
| !!! | GAGAACTGTAATAATTTGTT+GGG | - | chr6_3:97733155-97733174 | None:intergenic | 25.0% |
| ! | TGAACAATTTCCTGAAAAAA+GGG | - | chr6_3:97733283-97733302 | None:intergenic | 25.0% |
| ! | TTGAACAATTTCCTGAAAAA+AGG | - | chr6_3:97733284-97733303 | None:intergenic | 25.0% |
| ! | TCAAGAAACTTGTAAAATTC+AGG | - | chr6_3:97733727-97733746 | None:intergenic | 25.0% |
| !! | TACATTAACTCTTTGAGAAA+TGG | + | chr6_3:97734057-97734076 | Msa0967650:CDS | 25.0% |
| !! | ACATTAACTCTTTGAGAAAT+GGG | + | chr6_3:97734058-97734077 | Msa0967650:CDS | 25.0% |
| ! | TTTAATCATATGATCATCTG+AGG | - | chr6_3:97734424-97734443 | None:intergenic | 25.0% |
| ! | TAGATTGCTTTGATTCGATA+CGG | + | chr6_3:97730546-97730565 | Msa0967650:intron | 30.0% |
| ACTAGTATTCGATCTATCAT+CGG | + | chr6_3:97730605-97730624 | Msa0967650:intron | 30.0% | |
| CGCACAAATTCAATATCAAA+GGG | - | chr6_3:97730651-97730670 | None:intergenic | 30.0% | |
| TCGCACAAATTCAATATCAA+AGG | - | chr6_3:97730652-97730671 | None:intergenic | 30.0% | |
| GTTCCATTCATACAAGTATT+TGG | + | chr6_3:97730717-97730736 | Msa0967650:intron | 30.0% | |
| TGTCCAAATACTTGTATGAA+TGG | - | chr6_3:97730723-97730742 | None:intergenic | 30.0% | |
| ! | GATGAAGTGAATTTTGGATT+TGG | + | chr6_3:97730834-97730853 | Msa0967650:intron | 30.0% |
| AAATCCTAAAATTTCGGGAT+CGG | + | chr6_3:97730864-97730883 | Msa0967650:intron | 30.0% | |
| TTACATGTAATCACATGTGT+AGG | - | chr6_3:97730962-97730981 | None:intergenic | 30.0% | |
| AACCTTGAAGTTATAAAGCA+CGG | - | chr6_3:97731068-97731087 | None:intergenic | 30.0% | |
| GTTAATAGGTGTTCTCAATA+TGG | + | chr6_3:97731149-97731168 | Msa0967650:intron | 30.0% | |
| AATATAGTCATATGACAGTG+TGG | - | chr6_3:97731310-97731329 | None:intergenic | 30.0% | |
| ! | TACTTCTAAAGACGCATATA+TGG | - | chr6_3:97731426-97731445 | None:intergenic | 30.0% |
| !!! | ATGCGTCTTTAGAAGTATTT+TGG | + | chr6_3:97731429-97731448 | Msa0967650:intron | 30.0% |
| ATAACAACAATATACTCCGT+CGG | - | chr6_3:97731557-97731576 | None:intergenic | 30.0% | |
| AGGAGTCTATAATATTGAAG+AGG | - | chr6_3:97731670-97731689 | None:intergenic | 30.0% | |
| AGAAAAACAAAAGGCAAAAC+AGG | - | chr6_3:97731696-97731715 | None:intergenic | 30.0% | |
| !! | GGCTAATTTTAGCAATGATA+TGG | + | chr6_3:97732409-97732428 | Msa0967650:CDS | 30.0% |
| TTATATATGTCCTGGATGTA+AGG | - | chr6_3:97732554-97732573 | None:intergenic | 30.0% | |
| CATATATAACATCACAGCAA+AGG | + | chr6_3:97732565-97732584 | Msa0967650:CDS | 30.0% | |
| AATTGTACTCCAGAATTCAA+TGG | - | chr6_3:97732627-97732646 | None:intergenic | 30.0% | |
| TGATATCTTGGAAGAATATG+TGG | + | chr6_3:97732661-97732680 | Msa0967650:CDS | 30.0% | |
| GATATCTTGGAAGAATATGT+GGG | + | chr6_3:97732662-97732681 | Msa0967650:CDS | 30.0% | |
| AACATTACTCAAACAAGAAG+AGG | + | chr6_3:97732766-97732785 | Msa0967650:CDS | 30.0% | |
| GTAATATTCTCCTCAATGAA+AGG | - | chr6_3:97732896-97732915 | None:intergenic | 30.0% | |
| AGAATATTACCAAACCAGAT+TGG | + | chr6_3:97732906-97732925 | Msa0967650:CDS | 30.0% | |
| TTTCTTCACAGTTCAATTGT+TGG | + | chr6_3:97733103-97733122 | Msa0967650:CDS | 30.0% | |
| GCATTTCCCTCATTAATAAT+AGG | - | chr6_3:97733133-97733152 | None:intergenic | 30.0% | |
| ! | GGAGAACTGTAATAATTTGT+TGG | - | chr6_3:97733156-97733175 | None:intergenic | 30.0% |
| GAAAAACAGAGTGAACTTAT+AGG | + | chr6_3:97733496-97733515 | Msa0967650:CDS | 30.0% | |
| ATACTGCAAGAGAACATATT+TGG | - | chr6_3:97733578-97733597 | None:intergenic | 30.0% | |
| AAAATATTCCCTTACTGTGA+TGG | + | chr6_3:97733832-97733851 | Msa0967650:CDS | 30.0% | |
| AAATATTCCCTTACTGTGAT+GGG | + | chr6_3:97733833-97733852 | Msa0967650:CDS | 30.0% | |
| TTTGAGAAATGGGATATTAG+AGG | + | chr6_3:97734068-97734087 | Msa0967650:CDS | 30.0% | |
| TTGATGAATTCTTAAACCCT+TGG | - | chr6_3:97734110-97734129 | None:intergenic | 30.0% | |
| ATTGTTATGAAAACAGCCAT+TGG | + | chr6_3:97734303-97734322 | Msa0967650:CDS | 30.0% | |
| TGACAAAGACTGTTGAATTA+AGG | - | chr6_3:97734373-97734392 | None:intergenic | 30.0% | |
| ATGCAAGTAGTTTATGACAA+AGG | - | chr6_3:97734519-97734538 | None:intergenic | 30.0% | |
| ATAAACTACTTGCATGCATT+TGG | + | chr6_3:97734524-97734543 | Msa0967650:three_prime_UTR | 30.0% | |
| TAAACTACTTGCATGCATTT+GGG | + | chr6_3:97734525-97734544 | Msa0967650:three_prime_UTR | 30.0% | |
| !! | AACTGAAAGTATCTGTTTGA+AGG | + | chr6_3:97734602-97734621 | Msa0967650:three_prime_UTR | 30.0% |
| GAAAAAGGAAGAACGTAGAT+CGG | - | chr6_3:97730448-97730467 | None:intergenic | 35.0% | |
| CCAGAAAAGTAAAATCGGAA+GGG | - | chr6_3:97730478-97730497 | None:intergenic | 35.0% | |
| ACCAGAAAAGTAAAATCGGA+AGG | - | chr6_3:97730479-97730498 | None:intergenic | 35.0% | |
| !! | ACGGTTAGTTTATGATCGAT+TGG | + | chr6_3:97730565-97730584 | Msa0967650:intron | 35.0% |
| ! | AACGTAGTAGGACTAAGTTT+TGG | + | chr6_3:97730893-97730912 | Msa0967650:intron | 35.0% |
| !!! | TTGTCGTTTGTCTTTTTTCC+TGG | + | chr6_3:97731273-97731292 | Msa0967650:intron | 35.0% |
| !! | TTGCTTTGTTTCTCTCCAAT+TGG | + | chr6_3:97731597-97731616 | Msa0967650:intron | 35.0% |
| ACAAAAGGCAAAACAGGATA+AGG | - | chr6_3:97731690-97731709 | None:intergenic | 35.0% | |
| TTGAATGCTCAATCCATTGA+CGG | + | chr6_3:97731813-97731832 | Msa0967650:CDS | 35.0% | |
| TAAAAATGCATTGGATGCCA+AGG | + | chr6_3:97731974-97731993 | Msa0967650:CDS | 35.0% | |
| CAAGTTGTTGCTAAAATTGC+TGG | + | chr6_3:97732125-97732144 | Msa0967650:CDS | 35.0% | |
| AATAGTGATCCTATCAGTTC+AGG | - | chr6_3:97732176-97732195 | None:intergenic | 35.0% | |
| ATTCTTACTGCTGTAGTTCA+AGG | + | chr6_3:97732308-97732327 | Msa0967650:CDS | 35.0% | |
| TCCTGAATTGAAAATACGTC+TGG | + | chr6_3:97732475-97732494 | Msa0967650:CDS | 35.0% | |
| AGCCAACTTCACATAATACA+TGG | - | chr6_3:97732531-97732550 | None:intergenic | 35.0% | |
| CTGTGATGTTATATATGTCC+TGG | - | chr6_3:97732562-97732581 | None:intergenic | 35.0% | |
| TGATGAAGAGACTGATATCT+TGG | + | chr6_3:97732649-97732668 | Msa0967650:CDS | 35.0% | |
| !! | TCAATGAAAGGCATTACAAG+TGG | - | chr6_3:97732884-97732903 | None:intergenic | 35.0% |
| ACTTGTAATGCCTTTCATTG+AGG | + | chr6_3:97732883-97732902 | Msa0967650:CDS | 35.0% | |
| !! | ACAAGAGGTACTAATTTGTC+TGG | - | chr6_3:97732986-97733005 | None:intergenic | 35.0% |
| TGGCACACCTATTATTAATG+AGG | + | chr6_3:97733123-97733142 | Msa0967650:CDS | 35.0% | |
| GGCACACCTATTATTAATGA+GGG | + | chr6_3:97733124-97733143 | Msa0967650:CDS | 35.0% | |
| CTGAAAAAAGGGAGTTATAG+GGG | - | chr6_3:97733272-97733291 | None:intergenic | 35.0% | |
| CCTGAAAAAAGGGAGTTATA+GGG | - | chr6_3:97733273-97733292 | None:intergenic | 35.0% | |
| TCCTGAAAAAAGGGAGTTAT+AGG | - | chr6_3:97733274-97733293 | None:intergenic | 35.0% | |
| ! | ACTAGTTTCTGTCATCATGA+TGG | + | chr6_3:97733426-97733445 | Msa0967650:CDS | 35.0% |
| AACTTATAGGCCTTCTTTGT+GGG | + | chr6_3:97733509-97733528 | Msa0967650:CDS | 35.0% | |
| ACAGTCATTATTCAGAAGCT+AGG | + | chr6_3:97733538-97733557 | Msa0967650:CDS | 35.0% | |
| CAGTCATTATTCAGAAGCTA+GGG | + | chr6_3:97733539-97733558 | Msa0967650:CDS | 35.0% | |
| TGCAAGAGAACATATTTGGT+AGG | - | chr6_3:97733574-97733593 | None:intergenic | 35.0% | |
| CAGTATGCTGATCAGATAAT+GGG | + | chr6_3:97733592-97733611 | Msa0967650:CDS | 35.0% | |
| !! | AGATAATGGGACTATTCATC+CGG | + | chr6_3:97733605-97733624 | Msa0967650:CDS | 35.0% |
| GCAGGTATTTAGCAAAATCA+GGG | - | chr6_3:97733705-97733724 | None:intergenic | 35.0% | |
| GAAACTTGTAAAATTCAGGC+AGG | - | chr6_3:97733723-97733742 | None:intergenic | 35.0% | |
| ! | GATTGACCTTCAGAATTTTG+AGG | + | chr6_3:97733747-97733766 | Msa0967650:CDS | 35.0% |
| TCATAATCCCATCACAGTAA+GGG | - | chr6_3:97733843-97733862 | None:intergenic | 35.0% | |
| TCACCAATGCATGAAAACAA+GGG | - | chr6_3:97733919-97733938 | None:intergenic | 35.0% | |
| ATCACCAATGCATGAAAACA+AGG | - | chr6_3:97733920-97733939 | None:intergenic | 35.0% | |
| ! | GGATATTAGAGGCATATTCT+GGG | + | chr6_3:97734079-97734098 | Msa0967650:CDS | 35.0% |
| AGCATAAGGAATCAAGATCT+GGG | - | chr6_3:97734136-97734155 | None:intergenic | 35.0% | |
| TGTATATGCTATCCAAGAAC+TGG | - | chr6_3:97734170-97734189 | None:intergenic | 35.0% | |
| GTTCTTGGATAGCATATACA+TGG | + | chr6_3:97734170-97734189 | Msa0967650:CDS | 35.0% | |
| !!! | TCATTGACTTTTCTTACTGC+AGG | + | chr6_3:97734274-97734293 | Msa0967650:intron | 35.0% |
| !!! | CATTGACTTTTCTTACTGCA+GGG | + | chr6_3:97734275-97734294 | Msa0967650:intron | 35.0% |
| TGATTAAAGAATCTGCCGAA+TGG | + | chr6_3:97734436-97734455 | Msa0967650:CDS | 35.0% | |
| GATTAAAGAATCTGCCGAAT+GGG | + | chr6_3:97734437-97734456 | Msa0967650:CDS | 35.0% | |
| AACAGATATAGCACGATTGA+TGG | - | chr6_3:97734472-97734491 | None:intergenic | 35.0% | |
| AATCGTGCTATATCTGTTTG+AGG | + | chr6_3:97734474-97734493 | Msa0967650:CDS | 35.0% | |
| !! | CTTGAAAGTACTGGACTTAA+TGG | - | chr6_3:97734739-97734758 | None:intergenic | 35.0% |
| GCGATGAAGATACCTGAAAT+CGG | - | chr6_3:97730421-97730440 | None:intergenic | 40.0% | |
| CGGAAGGGAAATAACGAAAA+AGG | - | chr6_3:97730463-97730482 | None:intergenic | 40.0% | |
| !! | CCCTTCCGATTTTACTTTTC+TGG | + | chr6_3:97730475-97730494 | Msa0967650:intron | 40.0% |
| TCTGTGGTAGACAGAGATAT+CGG | + | chr6_3:97730774-97730793 | Msa0967650:intron | 40.0% | |
| CTAAAATTTCGGGATCGGTA+GGG | + | chr6_3:97730869-97730888 | Msa0967650:intron | 40.0% | |
| GTATCGTGTCTGTGTAGTAT+CGG | - | chr6_3:97730940-97730959 | None:intergenic | 40.0% | |
| ATAAAGCACGGACACAAATG+CGG | - | chr6_3:97731056-97731075 | None:intergenic | 40.0% | |
| GTCCGTGCTTTATAACTTCA+AGG | + | chr6_3:97731063-97731082 | Msa0967650:intron | 40.0% | |
| ! | TTGGCTTTCATCAAGTCTGT+TGG | + | chr6_3:97731097-97731116 | Msa0967650:intron | 40.0% |
| AGATCCAGAGACTAACCAAT+TGG | - | chr6_3:97731615-97731634 | None:intergenic | 40.0% | |
| ACCTGATGGCACAGAATAAT+TGG | - | chr6_3:97731761-97731780 | None:intergenic | 40.0% | |
| AGCATGCTGAAGAAAGTCTT+CGG | + | chr6_3:97731847-97731866 | Msa0967650:CDS | 40.0% | |
| AGAAAGTCTTCGGCAATTTC+AGG | + | chr6_3:97731857-97731876 | Msa0967650:CDS | 40.0% | |
| GTTTCTTGGTCTCTCTTTCT+GGG | + | chr6_3:97731895-97731914 | Msa0967650:CDS | 40.0% | |
| TTTCTTGGTCTCTCTTTCTG+GGG | + | chr6_3:97731896-97731915 | Msa0967650:CDS | 40.0% | |
| GTATCAAACCTGCCAACTTT+CGG | - | chr6_3:97731953-97731972 | None:intergenic | 40.0% | |
| CCAAGGATGAAAACAGAAAG+CGG | + | chr6_3:97731991-97732010 | Msa0967650:CDS | 40.0% | |
| CAAGGATGAAAACAGAAAGC+GGG | + | chr6_3:97731992-97732011 | Msa0967650:CDS | 40.0% | |
| TGAAAACAGAAAGCGGGAAT+TGG | + | chr6_3:97731998-97732017 | Msa0967650:CDS | 40.0% | |
| AAGCAAACATGCCTTAACCT+GGG | - | chr6_3:97732060-97732079 | None:intergenic | 40.0% | |
| TCATGTCAAGCAAGCAACTT+TGG | + | chr6_3:97732220-97732239 | Msa0967650:CDS | 40.0% | |
| TCTTGATCAACAACCTCATG+GGG | - | chr6_3:97732275-97732294 | None:intergenic | 40.0% | |
| GTCTTGATCAACAACCTCAT+GGG | - | chr6_3:97732276-97732295 | None:intergenic | 40.0% | |
| ! | GCCAGACGTATTTTCAATTC+AGG | - | chr6_3:97732479-97732498 | None:intergenic | 40.0% |
| ! | TCTGGCAGCTTTTGAATGTT+TGG | + | chr6_3:97732493-97732512 | Msa0967650:CDS | 40.0% |
| TGAATGTTTGGTCTCCATTG+CGG | + | chr6_3:97732505-97732524 | Msa0967650:CDS | 40.0% | |
| GGCCATGTATTATGTGAAGT+TGG | + | chr6_3:97732526-97732545 | Msa0967650:CDS | 40.0% | |
| TACTCCAGAATTCAATGGCT+TGG | - | chr6_3:97732622-97732641 | None:intergenic | 40.0% | |
| AATATGTGGGTGATACCACT+GGG | + | chr6_3:97732675-97732694 | Msa0967650:CDS | 40.0% | |
| GTAATGTTTCCAACAGCAGA+GGG | - | chr6_3:97732754-97732773 | None:intergenic | 40.0% | |
| AGTAATGTTTCCAACAGCAG+AGG | - | chr6_3:97732755-97732774 | None:intergenic | 40.0% | |
| ACAAGAAGAGGATCAAGATC+TGG | + | chr6_3:97732778-97732797 | Msa0967650:CDS | 40.0% | |
| AGGTGCATGGAATATTGCAA+TGG | + | chr6_3:97732805-97732824 | Msa0967650:CDS | 40.0% | |
| TAGTACGAGCAACTAAACCA+AGG | - | chr6_3:97732844-97732863 | None:intergenic | 40.0% | |
| !! | GTATGCATTTGGCTCTATCT+TGG | + | chr6_3:97732949-97732968 | Msa0967650:CDS | 40.0% |
| ! | GGTACTAATTTGTCTGGAGA+AGG | - | chr6_3:97732980-97732999 | None:intergenic | 40.0% |
| ! | AGCACTGAGCATAAATGGTA+GGG | - | chr6_3:97733017-97733036 | None:intergenic | 40.0% |
| !! | ACTAGAGCACTGAGCATAAA+TGG | - | chr6_3:97733022-97733041 | None:intergenic | 40.0% |
| GTGTCTTTAACATGGTTGCT+TGG | - | chr6_3:97733052-97733071 | None:intergenic | 40.0% | |
| AAGCAGTGGTGTCTTTAACA+TGG | - | chr6_3:97733060-97733079 | None:intergenic | 40.0% | |
| ATGTTAAAGACACCACTGCT+TGG | + | chr6_3:97733059-97733078 | Msa0967650:CDS | 40.0% | |
| AGCCTTTCTCAGCAACATTA+GGG | - | chr6_3:97733198-97733217 | None:intergenic | 40.0% | |
| !!! | CCCTATAACTCCCTTTTTTC+AGG | + | chr6_3:97733270-97733289 | Msa0967650:CDS | 40.0% |
| AACAGATGAAACAGCTCCTT+TGG | + | chr6_3:97733396-97733415 | Msa0967650:CDS | 40.0% | |
| GAAACTAGTTGCAACACCAA+AGG | - | chr6_3:97733415-97733434 | None:intergenic | 40.0% | |
| GAACTTATAGGCCTTCTTTG+TGG | + | chr6_3:97733508-97733527 | Msa0967650:CDS | 40.0% | |
| GCAGTATGCTGATCAGATAA+TGG | + | chr6_3:97733591-97733610 | Msa0967650:CDS | 40.0% | |
| !! | GATAATGGGACTATTCATCC+GGG | + | chr6_3:97733606-97733625 | Msa0967650:CDS | 40.0% |
| CATTTCTACAAGCAAAGACC+CGG | - | chr6_3:97733627-97733646 | None:intergenic | 40.0% | |
| GGCAGGTATTTAGCAAAATC+AGG | - | chr6_3:97733706-97733725 | None:intergenic | 40.0% | |
| GGTACTCCTCAAAATTCTGA+AGG | - | chr6_3:97733756-97733775 | None:intergenic | 40.0% | |
| GTCATAATCCCATCACAGTA+AGG | - | chr6_3:97733844-97733863 | None:intergenic | 40.0% | |
| ACCAATGCATGAAAACAAGG+GGG | - | chr6_3:97733917-97733936 | None:intergenic | 40.0% | |
| CACCAATGCATGAAAACAAG+GGG | - | chr6_3:97733918-97733937 | None:intergenic | 40.0% | |
| GGTGATATAGCACTAGCTAT+AGG | + | chr6_3:97733934-97733953 | Msa0967650:CDS | 40.0% | |
| ! | GGGATATTAGAGGCATATTC+TGG | + | chr6_3:97734078-97734097 | Msa0967650:CDS | 40.0% |
| !! | CATATTCTGGGATCTTCCAA+GGG | + | chr6_3:97734091-97734110 | Msa0967650:CDS | 40.0% |
| GAGCATAAGGAATCAAGATC+TGG | - | chr6_3:97734137-97734156 | None:intergenic | 40.0% | |
| ATCCAAGAACTGGAGAATGT+GGG | - | chr6_3:97734160-97734179 | None:intergenic | 40.0% | |
| TATCCAAGAACTGGAGAATG+TGG | - | chr6_3:97734161-97734180 | None:intergenic | 40.0% | |
| CATGTGTCAAATTGTCTCCA+TGG | + | chr6_3:97734573-97734592 | Msa0967650:three_prime_UTR | 40.0% | |
| TACTTTCAGTTGTCTGACCA+TGG | - | chr6_3:97734593-97734612 | None:intergenic | 40.0% | |
| ATGCAAGAGTTAGTGACAAC+TGG | - | chr6_3:97734632-97734651 | None:intergenic | 40.0% | |
| ACTTAATGGTGCTCATGCAA+AGG | - | chr6_3:97734675-97734694 | None:intergenic | 40.0% | |
| CTTGAACGTACTGGACTTAA+TGG | - | chr6_3:97734689-97734708 | None:intergenic | 40.0% | |
| TGATGCATTCTTGAACGTAC+TGG | - | chr6_3:97734698-97734717 | None:intergenic | 40.0% | |
| ATGAGAGAGAAGAAGAGCGA+AGG | - | chr6_3:97730358-97730377 | None:intergenic | 45.0% | |
| GAGATCTGAAAGAGTAGCGA+GGG | - | chr6_3:97730394-97730413 | None:intergenic | 45.0% | |
| AGAGATCTGAAAGAGTAGCG+AGG | - | chr6_3:97730395-97730414 | None:intergenic | 45.0% | |
| CAGATCTCTTCTCCGATTTC+AGG | + | chr6_3:97730406-97730425 | Msa0967650:five_prime_UTR | 45.0% | |
| ATCGGCGGGTGTGAATAAAT+AGG | + | chr6_3:97730792-97730811 | Msa0967650:intron | 45.0% | |
| ! | CCTACCGATCCCGAAATTTT+AGG | - | chr6_3:97730871-97730890 | None:intergenic | 45.0% |
| CCTAAAATTTCGGGATCGGT+AGG | + | chr6_3:97730868-97730887 | Msa0967650:intron | 45.0% | |
| !!! | ACTAAGTTTTGGAGCCTTCG+AGG | + | chr6_3:97730904-97730923 | Msa0967650:intron | 45.0% |
| AGTGTGGTACGAAACAAACC+AGG | - | chr6_3:97731294-97731313 | None:intergenic | 45.0% | |
| !! | CTCTCCAATTGGTTAGTCTC+TGG | + | chr6_3:97731608-97731627 | Msa0967650:intron | 45.0% |
| GCCAATTATTCTGTGCCATC+AGG | + | chr6_3:97731757-97731776 | Msa0967650:intron | 45.0% | |
| CATCGCTATGCTATACCTGA+TGG | - | chr6_3:97731775-97731794 | None:intergenic | 45.0% | |
| CATCAGGTATAGCATAGCGA+TGG | + | chr6_3:97731773-97731792 | Msa0967650:intron | 45.0% | |
| CATAGCGATGGAAGTTACTC+AGG | + | chr6_3:97731785-97731804 | Msa0967650:exon | 45.0% | |
| CTTACGTACAGTTCCGTCAA+TGG | - | chr6_3:97731829-97731848 | None:intergenic | 45.0% | |
| TTTCAGGAGCAAAACCTTCC+TGG | + | chr6_3:97731873-97731892 | Msa0967650:CDS | 45.0% | |
| GCAAAACCTTCCTGGTTTCT+TGG | + | chr6_3:97731881-97731900 | Msa0967650:CDS | 45.0% | |
| GAAAGAGAGACCAAGAAACC+AGG | - | chr6_3:97731894-97731913 | None:intergenic | 45.0% | |
| GGTTTCTTGGTCTCTCTTTC+TGG | + | chr6_3:97731894-97731913 | Msa0967650:CDS | 45.0% | |
| !! | ACCAGTTGATAGCCGAAAGT+TGG | + | chr6_3:97731938-97731957 | Msa0967650:CDS | 45.0% |
| ! | CCGCTTTCTGTTTTCATCCT+TGG | - | chr6_3:97731994-97732013 | None:intergenic | 45.0% |
| GAAGCAAACATGCCTTAACC+TGG | - | chr6_3:97732061-97732080 | None:intergenic | 45.0% | |
| TTGAGCTTCCTCAGAAACAG+TGG | + | chr6_3:97732150-97732169 | Msa0967650:CDS | 45.0% | |
| AAACAGTGGCCTGAACTGAT+AGG | + | chr6_3:97732164-97732183 | Msa0967650:CDS | 45.0% | |
| ! | CAAGCAACTTTGGAGACTCT+GGG | + | chr6_3:97732230-97732249 | Msa0967650:CDS | 45.0% |
| ! | AAGCAACTTTGGAGACTCTG+GGG | + | chr6_3:97732231-97732250 | Msa0967650:CDS | 45.0% |
| CTTGATCAACAACCTCATGG+GGG | - | chr6_3:97732274-97732293 | None:intergenic | 45.0% | |
| GGTCTTGATCAACAACCTCA+TGG | - | chr6_3:97732277-97732296 | None:intergenic | 45.0% | |
| !! | GAGAGCATTATACAATGCCC+TGG | - | chr6_3:97732378-97732397 | None:intergenic | 45.0% |
| TAATGCTCTCGAATTTGCGC+AGG | + | chr6_3:97732388-97732407 | Msa0967650:CDS | 45.0% | |
| CACATAATACATGGCCGCAA+TGG | - | chr6_3:97732522-97732541 | None:intergenic | 45.0% | |
| ACATCACAGCAAAGGCTGTT+AGG | + | chr6_3:97732573-97732592 | Msa0967650:CDS | 45.0% | |
| AAAGGCTGTTAGGAGTGATG+AGG | + | chr6_3:97732583-97732602 | Msa0967650:CDS | 45.0% | |
| CTCTCCAAGCCATTGAATTC+TGG | + | chr6_3:97732615-97732634 | Msa0967650:CDS | 45.0% | |
| GAATATGTGGGTGATACCAC+TGG | + | chr6_3:97732674-97732693 | Msa0967650:CDS | 45.0% | |
| ATATGTGGGTGATACCACTG+GGG | + | chr6_3:97732676-97732695 | Msa0967650:CDS | 45.0% | |
| GAGGATCAAGATCTGGATGA+AGG | + | chr6_3:97732785-97732804 | Msa0967650:CDS | 45.0% | |
| ! | AAGATCTGGATGAAGGTGCA+TGG | + | chr6_3:97732792-97732811 | Msa0967650:CDS | 45.0% |
| GCATGGAATATTGCAATGGC+AGG | + | chr6_3:97732809-97732828 | Msa0967650:CDS | 45.0% | |
| TGGAATATTGCAATGGCAGG+TGG | + | chr6_3:97732812-97732831 | Msa0967650:CDS | 45.0% | |
| GGTTTAGTTGCTCGTACTAC+TGG | + | chr6_3:97732845-97732864 | Msa0967650:CDS | 45.0% | |
| CAAACCAGATTGGAGACAGA+GGG | + | chr6_3:97732916-97732935 | Msa0967650:CDS | 45.0% | |
| !! | TGCATTTGGCTCTATCTTGG+AGG | + | chr6_3:97732952-97732971 | Msa0967650:CDS | 45.0% |
| !! | GCATTTGGCTCTATCTTGGA+GGG | + | chr6_3:97732953-97732972 | Msa0967650:CDS | 45.0% |
| !! | CATTTGGCTCTATCTTGGAG+GGG | + | chr6_3:97732954-97732973 | Msa0967650:CDS | 45.0% |
| !! | GAGCACTGAGCATAAATGGT+AGG | - | chr6_3:97733018-97733037 | None:intergenic | 45.0% |
| TATGCTCAGTGCTCTAGTGA+AGG | + | chr6_3:97733024-97733043 | Msa0967650:CDS | 45.0% | |
| AGTTCTCCTTCAGAGCATGA+AGG | + | chr6_3:97733168-97733187 | Msa0967650:CDS | 45.0% | |
| GTCCCTAATGTTGCTGAGAA+AGG | + | chr6_3:97733193-97733212 | Msa0967650:CDS | 45.0% | |
| CAGCCTTTCTCAGCAACATT+AGG | - | chr6_3:97733199-97733218 | None:intergenic | 45.0% | |
| AATGTTGCTGAGAAAGGCTG+TGG | + | chr6_3:97733199-97733218 | Msa0967650:CDS | 45.0% | |
| AAAATCAGGGCCTATCGCAT+AGG | - | chr6_3:97733692-97733711 | None:intergenic | 45.0% | |
| CAACAGTTACGGCACAAACT+TGG | - | chr6_3:97733777-97733796 | None:intergenic | 45.0% | |
| CAAGTTTGTGCCGTAACTGT+TGG | + | chr6_3:97733775-97733794 | Msa0967650:CDS | 45.0% | |
| CCAATGCATGAAAACAAGGG+GGG | - | chr6_3:97733916-97733935 | None:intergenic | 45.0% | |
| CAAGTCAAAGCCTGATGTGT+GGG | - | chr6_3:97734025-97734044 | None:intergenic | 45.0% | |
| !! | GCATATTCTGGGATCTTCCA+AGG | + | chr6_3:97734090-97734109 | Msa0967650:CDS | 45.0% |
| TCCAAGAACTGGAGAATGTG+GGG | - | chr6_3:97734159-97734178 | None:intergenic | 45.0% | |
| !! | AAAACAGCCATTGGTGTCGT+TGG | + | chr6_3:97734312-97734331 | Msa0967650:CDS | 45.0% |
| TAGATCTCCAACGACACCAA+TGG | - | chr6_3:97734322-97734341 | None:intergenic | 45.0% | |
| GGAGATCTAGCTGATACACT+TGG | + | chr6_3:97734333-97734352 | Msa0967650:CDS | 45.0% | |
| GATACACTTGGAAGCAATGC+TGG | + | chr6_3:97734345-97734364 | Msa0967650:CDS | 45.0% | |
| TGCAAAGGTCAGTGATGCAT+TGG | - | chr6_3:97734660-97734679 | None:intergenic | 45.0% | |
| CAATCGCAAGTAGAGATGCC+AGG | - | chr6_3:97730312-97730331 | None:intergenic | 50.0% | |
| AGGAAGGAAGGAAGGAACAG+CGG | - | chr6_3:97730338-97730357 | None:intergenic | 50.0% | |
| AAGAGCGAAGGAAGGAAGGA+AGG | - | chr6_3:97730346-97730365 | None:intergenic | 50.0% | |
| GAAGAAGAGCGAAGGAAGGA+AGG | - | chr6_3:97730350-97730369 | None:intergenic | 50.0% | |
| GAGAGAAGAAGAGCGAAGGA+AGG | - | chr6_3:97730354-97730373 | None:intergenic | 50.0% | |
| TCTGAAAGAGTAGCGAGGGA+AGG | - | chr6_3:97730390-97730409 | None:intergenic | 50.0% | |
| GTGGTAGACAGAGATATCGG+CGG | + | chr6_3:97730777-97730796 | Msa0967650:intron | 50.0% | |
| TGGTAGACAGAGATATCGGC+GGG | + | chr6_3:97730778-97730797 | Msa0967650:intron | 50.0% | |
| GGCGGGTGTGAATAAATAGG+TGG | + | chr6_3:97730795-97730814 | Msa0967650:intron | 50.0% | |
| GATCGGTAGGGTAACGTAGT+AGG | + | chr6_3:97730881-97730900 | Msa0967650:intron | 50.0% | |
| CTGACACACGTACGTTGAAC+CGG | - | chr6_3:97731009-97731028 | None:intergenic | 50.0% | |
| GAGAGACCAAGAAACCAGGA+AGG | - | chr6_3:97731890-97731909 | None:intergenic | 50.0% | |
| GCCAACTTTCGGCTATCAAC+TGG | - | chr6_3:97731942-97731961 | None:intergenic | 50.0% | |
| !! | GTTGATAGCCGAAAGTTGGC+AGG | + | chr6_3:97731942-97731961 | Msa0967650:CDS | 50.0% |
| ! | AGCGGGAATTGGTTCAGAGA+TGG | + | chr6_3:97732009-97732028 | Msa0967650:CDS | 50.0% |
| GTCATTAGACACTGCAGCGA+AGG | + | chr6_3:97732034-97732053 | Msa0967650:CDS | 50.0% | |
| CCTCTCTTGTACTTGACGCT+CGG | + | chr6_3:97732090-97732109 | Msa0967650:CDS | 50.0% | |
| !! | AGTTCAGGCCACTGTTTCTG+AGG | - | chr6_3:97732161-97732180 | None:intergenic | 50.0% |
| GCTTGACATGAGCAGGAACT+TGG | - | chr6_3:97732211-97732230 | None:intergenic | 50.0% | |
| GTTGCTTGCTTGACATGAGC+AGG | - | chr6_3:97732218-97732237 | None:intergenic | 50.0% | |
| ! | GCAAGCAACTTTGGAGACTC+TGG | + | chr6_3:97732229-97732248 | Msa0967650:CDS | 50.0% |
| !! | GACTCTGGGGTATTTGTGTG+AGG | + | chr6_3:97732244-97732263 | Msa0967650:CDS | 50.0% |
| ! | GAAGTTGGCTCCTTACATCC+AGG | + | chr6_3:97732541-97732560 | Msa0967650:CDS | 50.0% |
| ! | TCAATGGCTTGGAGAGCAAC+AGG | - | chr6_3:97732611-97732630 | None:intergenic | 50.0% |
| AGGTATATCAGAGTCCCCAG+TGG | - | chr6_3:97732693-97732712 | None:intergenic | 50.0% | |
| CCTCTGTCTCCAATCTGGTT+TGG | - | chr6_3:97732918-97732937 | None:intergenic | 50.0% | |
| CCAAACCAGATTGGAGACAG+AGG | + | chr6_3:97732915-97732934 | Msa0967650:CDS | 50.0% | |
| GAAGCAGCGACGTATGCATT+TGG | + | chr6_3:97732938-97732957 | Msa0967650:CDS | 50.0% | |
| GGTAGGGCGTGATTAACAAG+AGG | - | chr6_3:97733001-97733020 | None:intergenic | 50.0% | |
| AGACACCACTGCTTGGACTT+TGG | + | chr6_3:97733066-97733085 | Msa0967650:CDS | 50.0% | |
| GACACCACTGCTTGGACTTT+GGG | + | chr6_3:97733067-97733086 | Msa0967650:CDS | 50.0% | |
| ACACCACTGCTTGGACTTTG+GGG | + | chr6_3:97733068-97733087 | Msa0967650:CDS | 50.0% | |
| GGACATCCTTCATGCTCTGA+AGG | - | chr6_3:97733177-97733196 | None:intergenic | 50.0% | |
| ACCCTGGGCGAGAAAATACA+GGG | - | chr6_3:97733227-97733246 | None:intergenic | 50.0% | |
| AACCCTGGGCGAGAAAATAC+AGG | - | chr6_3:97733228-97733247 | None:intergenic | 50.0% | |
| ! | TTTTCTCGCCCAGGGTTATG+AGG | + | chr6_3:97733231-97733250 | Msa0967650:CDS | 50.0% |
| TCCCACATCCTCATAACCCT+GGG | - | chr6_3:97733242-97733261 | None:intergenic | 50.0% | |
| TTCCCACATCCTCATAACCC+TGG | - | chr6_3:97733243-97733262 | None:intergenic | 50.0% | |
| TCTGTGGGTGACAGTGAGAA+GGG | - | chr6_3:97733308-97733327 | None:intergenic | 50.0% | |
| CTGTCAAGCACCCACAAAGA+AGG | - | chr6_3:97733522-97733541 | None:intergenic | 50.0% | |
| TAGAAATGCCACTGCCCATG+AGG | + | chr6_3:97733639-97733658 | Msa0967650:CDS | 50.0% | |
| AAGGGCTCCAATAGCTAGCA+TGG | - | chr6_3:97733668-97733687 | None:intergenic | 50.0% | |
| GCCGTAACTGTTGGTGTAGT+CGG | + | chr6_3:97733784-97733803 | Msa0967650:CDS | 50.0% | |
| GCCGACTACACCAACAGTTA+CGG | - | chr6_3:97733788-97733807 | None:intergenic | 50.0% | |
| TGTAGTCGGCGACATATGCA+GGG | + | chr6_3:97733798-97733817 | Msa0967650:CDS | 50.0% | |
| !!! | CCCCCCTTGTTTTCATGCAT+TGG | + | chr6_3:97733913-97733932 | Msa0967650:CDS | 50.0% |
| CCAAGTCAAAGCCTGATGTG+TGG | - | chr6_3:97734026-97734045 | None:intergenic | 50.0% | |
| ! | CCACACATCAGGCTTTGACT+TGG | + | chr6_3:97734023-97734042 | Msa0967650:CDS | 50.0% |
| ! | TGGAGAATGTGGGGAGCATA+AGG | - | chr6_3:97734150-97734169 | None:intergenic | 50.0% |
| TCCCCACATTCTCCAGTTCT+TGG | + | chr6_3:97734155-97734174 | Msa0967650:CDS | 50.0% | |
| ! | AGCACGATTGATGGCCAACT+TGG | - | chr6_3:97734463-97734482 | None:intergenic | 50.0% |
| !! | TCGGTGCTACATAGCCTCGA+AGG | - | chr6_3:97730921-97730940 | None:intergenic | 55.0% |
| AGTGTCGTGTCCAGTGTCCA+TGG | + | chr6_3:97731027-97731046 | Msa0967650:intron | 55.0% | |
| AATGCGGACACCATGGACAC+TGG | - | chr6_3:97731040-97731059 | None:intergenic | 55.0% | |
| GGACACAAATGCGGACACCA+TGG | - | chr6_3:97731047-97731066 | None:intergenic | 55.0% | |
| CCGAGCGTCAAGTACAAGAG+AGG | - | chr6_3:97732093-97732112 | None:intergenic | 55.0% | |
| !! | ATGTCAGACTTGCTGCTGCC+AGG | + | chr6_3:97732357-97732376 | Msa0967650:CDS | 55.0% |
| !! | TGTCAGACTTGCTGCTGCCA+GGG | + | chr6_3:97732358-97732377 | Msa0967650:CDS | 55.0% |
| ATGGCAGGTGGTACATGCCT+TGG | + | chr6_3:97732824-97732843 | Msa0967650:CDS | 55.0% | |
| GCTTCCCTCTGTCTCCAATC+TGG | - | chr6_3:97732923-97732942 | None:intergenic | 55.0% | |
| ! | AGCCCTGTATTTTCTCGCCC+AGG | + | chr6_3:97733222-97733241 | Msa0967650:CDS | 55.0% |
| ! | GCCCTGTATTTTCTCGCCCA+GGG | + | chr6_3:97733223-97733242 | Msa0967650:CDS | 55.0% |
| GCCCAGGGTTATGAGGATGT+GGG | + | chr6_3:97733238-97733257 | Msa0967650:CDS | 55.0% | |
| CTCTGTGGGTGACAGTGAGA+AGG | - | chr6_3:97733309-97733328 | None:intergenic | 55.0% | |
| TCTCACTGTCACCCACAGAG+AGG | + | chr6_3:97733309-97733328 | Msa0967650:CDS | 55.0% | |
| CACCCACAGAGAGGATGCTA+CGG | + | chr6_3:97733318-97733337 | Msa0967650:CDS | 55.0% | |
| CTCCGTAGCATCCTCTCTGT+GGG | - | chr6_3:97733323-97733342 | None:intergenic | 55.0% | |
| ACTCCGTAGCATCCTCTCTG+TGG | - | chr6_3:97733324-97733343 | None:intergenic | 55.0% | |
| GAGAGGATGCTACGGAGTCA+CGG | + | chr6_3:97733326-97733345 | Msa0967650:CDS | 55.0% | |
| AAATGCCACTGCCCATGAGG+AGG | + | chr6_3:97733642-97733661 | Msa0967650:CDS | 55.0% | |
| AGCTAGCATGGCCTCCTCAT+GGG | - | chr6_3:97733656-97733675 | None:intergenic | 55.0% | |
| TAGCTAGCATGGCCTCCTCA+TGG | - | chr6_3:97733657-97733676 | None:intergenic | 55.0% | |
| GAGGAGGCCATGCTAGCTAT+TGG | + | chr6_3:97733658-97733677 | Msa0967650:CDS | 55.0% | |
| AGGGCCTATCGCATAGGCAA+GGG | - | chr6_3:97733686-97733705 | None:intergenic | 55.0% | |
| GTGTAGTCGGCGACATATGC+AGG | + | chr6_3:97733797-97733816 | Msa0967650:CDS | 55.0% | |
| !! | CGACATATGCAGGGCATTGG+AGG | + | chr6_3:97733807-97733826 | Msa0967650:CDS | 55.0% |
| ACAAGGGGGGCTTCACAGAA+CGG | - | chr6_3:97733903-97733922 | None:intergenic | 55.0% | |
| GAGATGTACGCCCACACATC+AGG | + | chr6_3:97734012-97734031 | Msa0967650:CDS | 55.0% | |
| ATCTGCCGAATGGGCCAAGT+TGG | + | chr6_3:97734446-97734465 | Msa0967650:CDS | 55.0% | |
| GATGGCCAACTTGGCCCATT+CGG | - | chr6_3:97734454-97734473 | None:intergenic | 55.0% | |
| GCATGCATTTGGGTGTGTCG+AGG | + | chr6_3:97734535-97734554 | Msa0967650:three_prime_UTR | 55.0% | |
| TGCATTTGGGTGTGTCGAGG+TGG | + | chr6_3:97734538-97734557 | Msa0967650:three_prime_UTR | 55.0% | |
| GCATTTGGGTGTGTCGAGGT+GGG | + | chr6_3:97734539-97734558 | Msa0967650:three_prime_UTR | 55.0% | |
| TGCAGCGAAGGCCCAGGTTA+AGG | + | chr6_3:97732046-97732065 | Msa0967650:CDS | 60.0% | |
| GTGTGAGGAAGTCCCCCATG+AGG | + | chr6_3:97732259-97732278 | Msa0967650:CDS | 60.0% | |
| CAGAGGGACGAGTGCAGGAA+GGG | - | chr6_3:97732738-97732757 | None:intergenic | 60.0% | |
| AACAGCAGAGGGACGAGTGC+AGG | - | chr6_3:97732743-97732762 | None:intergenic | 60.0% | |
| TGCACTCGTCCCTCTGCTGT+TGG | + | chr6_3:97732742-97732761 | Msa0967650:CDS | 60.0% | |
| ! | CCACTGCTTGGACTTTGGGG+CGG | + | chr6_3:97733071-97733090 | Msa0967650:CDS | 60.0% |
| CGCCCAGGGTTATGAGGATG+TGG | + | chr6_3:97733237-97733256 | Msa0967650:CDS | 60.0% | |
| GGAGCCCTTGCCTATGCGAT+AGG | + | chr6_3:97733679-97733698 | Msa0967650:CDS | 60.0% | |
| CAGGGCCTATCGCATAGGCA+AGG | - | chr6_3:97733687-97733706 | None:intergenic | 60.0% | |
| CGGCGACATATGCAGGGCAT+TGG | + | chr6_3:97733804-97733823 | Msa0967650:CDS | 60.0% | |
| AGACACTGCAGCGAAGGCCC+AGG | + | chr6_3:97732040-97732059 | Msa0967650:CDS | 65.0% | |
| GCAGAGGGACGAGTGCAGGA+AGG | - | chr6_3:97732739-97732758 | None:intergenic | 65.0% | |
| CCGCCCCAAAGTCCAAGCAG+TGG | - | chr6_3:97733074-97733093 | None:intergenic | 65.0% | |
| CATGGCCTCCTCATGGGCAG+TGG | - | chr6_3:97733650-97733669 | None:intergenic | 65.0% | |
| GGTGTGTCGAGGTGGGTCGT+GGG | + | chr6_3:97734546-97734565 | Msa0967650:three_prime_UTR | 65.0% | |
| GGGTGTGTCGAGGTGGGTCG+TGG | + | chr6_3:97734545-97734564 | Msa0967650:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 97730297 | 97734759 | 97730297 | ID=Msa0967650;Name=Msa0967650 |
| chr6_3 | mRNA | 97730297 | 97734759 | 97730297 | ID=Msa0967650-mRNA-1;Parent=Msa0967650;Name=Msa0967650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=144|1|1|1|0.5|0.33|3|265|869 |
| chr6_3 | exon | 97730297 | 97730427 | 97730297 | ID=Msa0967650-mRNA-1:exon:18176;Parent=Msa0967650-mRNA-1 |
| chr6_3 | exon | 97731779 | 97734202 | 97731779 | ID=Msa0967650-mRNA-1:exon:18177;Parent=Msa0967650-mRNA-1 |
| chr6_3 | exon | 97734296 | 97734759 | 97734296 | ID=Msa0967650-mRNA-1:exon:18178;Parent=Msa0967650-mRNA-1 |
| chr6_3 | five_prime_UTR | 97730297 | 97730427 | 97730297 | ID=Msa0967650-mRNA-1:five_prime_utr;Parent=Msa0967650-mRNA-1 |
| chr6_3 | five_prime_UTR | 97731779 | 97731791 | 97731779 | ID=Msa0967650-mRNA-1:five_prime_utr;Parent=Msa0967650-mRNA-1 |
| chr6_3 | CDS | 97731792 | 97734202 | 97731792 | ID=Msa0967650-mRNA-1:cds;Parent=Msa0967650-mRNA-1 |
| chr6_3 | CDS | 97734296 | 97734494 | 97734296 | ID=Msa0967650-mRNA-1:cds;Parent=Msa0967650-mRNA-1 |
| chr6_3 | three_prime_UTR | 97734495 | 97734759 | 97734495 | ID=Msa0967650-mRNA-1:three_prime_utr;Parent=Msa0967650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
