AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1218330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218330 MtrunA17_Chr4g0067981 98.532 681 8 2 1 680 1 680 0.0 1373
Msa1218330 MtrunA17_Chr2g0294911 62.445 679 170 13 6 680 4 601 0.0 766
Msa1218330 MtrunA17_Chr1g0161431 57.012 328 131 5 24 345 4 327 2.05e-117 365
Msa1218330 MtrunA17_Chr3g0137101 59.542 262 98 2 26 280 3 263 3.60e-101 323
Msa1218330 MtrunA17_Chr3g0123131 60.784 255 98 1 31 283 13 267 1.28e-97 311
Msa1218330 MtrunA17_Chr8g0376881 59.216 255 104 0 29 283 23 277 4.63e-95 303
Msa1218330 MtrunA17_Chr1g0149841 57.414 263 98 3 28 282 2 258 1.71e-94 301
Msa1218330 MtrunA17_Chr2g0304841 45.767 378 173 9 29 387 16 380 6.01e-89 292
Msa1218330 MtrunA17_Chr7g0275891 50.000 294 116 6 28 300 2 285 1.45e-83 267
Msa1218330 MtrunA17_Chr4g0074411 47.522 343 150 9 31 356 18 347 4.99e-83 274
Msa1218330 MtrunA17_Chr1g0149851 53.091 275 98 4 28 278 2 269 8.26e-82 269
Msa1218330 MtrunA17_Chr4g0074401 45.251 358 158 10 29 364 15 356 1.36e-80 267
Msa1218330 MtrunA17_Chr7g0275401 48.097 289 137 4 28 308 2 285 1.26e-78 252
Msa1218330 MtrunA17_Chr3g0134461 49.583 240 70 2 26 264 3 192 9.15e-61 201
Msa1218330 MtrunA17_Chr1g0149831 53.659 205 70 4 90 282 1 192 8.06e-59 197
Msa1218330 MtrunA17_Chr4g0074421 56.477 193 73 4 81 269 2 187 2.51e-58 195
Msa1218330 MtrunA17_Chr4g0009851 42.324 241 113 4 31 271 11 225 2.72e-56 194
Msa1218330 MtrunA17_Chr4g0009901 42.562 242 113 2 31 272 10 225 9.00e-56 191
Msa1218330 MtrunA17_Chr3g0134481 61.069 131 51 0 28 158 5 135 1.11e-48 169
Msa1218330 MtrunA17_Chr3g0134481 62.264 53 20 0 214 266 131 183 3.30e-16 77.4
Msa1218330 MtrunA17_Chr4g0009981 41.327 196 90 1 76 271 2 172 8.54e-45 160
Msa1218330 MtrunA17_Chr6g0471041 38.934 244 119 6 30 271 13 228 8.56e-45 165
Msa1218330 MtrunA17_Chr8g0391911 37.109 256 137 8 31 274 9 252 1.80e-36 137
Msa1218330 MtrunA17_Chr8g0350761 31.481 270 162 6 33 281 19 286 4.97e-31 127
Msa1218330 MtrunA17_Chr6g0473731 36.313 179 89 2 111 283 10 169 2.54e-29 121
Msa1218330 MtrunA17_Chr8g0383961 43.750 128 72 0 30 157 13 140 2.08e-28 114
Msa1218330 MtrunA17_Chr4g0011071 32.919 161 83 1 81 241 39 174 1.14e-25 104
Msa1218330 MtrunA17_Chr4g0031961 54.082 98 37 2 188 277 96 193 3.17e-24 103
Msa1218330 MtrunA17_Chr3g0127941 34.239 184 113 4 35 212 56 237 2.54e-23 105
Msa1218330 MtrunA17_Chr7g0255711 63.768 69 25 0 208 276 84 152 3.79e-23 100
Msa1218330 MtrunA17_Chr6g0456631 36.220 127 78 2 29 153 7 132 9.51e-23 95.9
Msa1218330 MtrunA17_Chr4g0009991 40.141 142 59 2 123 264 1 116 2.09e-22 93.2
Msa1218330 MtrunA17_Chr7g0276361 38.686 137 73 3 25 153 2 135 2.33e-21 98.6
Msa1218330 MtrunA17_Chr7g0223971 33.333 195 83 4 113 274 1 181 2.55e-21 98.2
Msa1218330 MtrunA17_Chr4g0030271 38.211 123 71 2 35 153 89 210 3.21e-21 99.0
Msa1218330 MtrunA17_Chr1g0181811 38.525 122 72 1 35 153 85 206 8.69e-21 97.4
Msa1218330 MtrunA17_Chr8g0345901 39.344 122 67 3 37 153 38 157 2.09e-19 92.8
Msa1218330 MtrunA17_Chr3g0091641 34.677 124 78 1 35 155 24 147 4.74e-19 91.3
Msa1218330 MtrunA17_Chr5g0400241 57.971 69 29 0 205 273 301 369 7.81e-19 90.5
Msa1218330 MtrunA17_Chr5g0400241 36.364 132 80 2 26 156 9 137 1.24e-14 77.4
Msa1218330 MtrunA17_Chr4g0061021 35.036 137 83 3 23 155 22 156 1.13e-18 90.1
Msa1218330 MtrunA17_Chr4g0054981 50.000 78 37 1 214 291 309 384 1.14e-17 87.0
Msa1218330 MtrunA17_Chr4g0054981 36.220 127 77 2 31 156 14 137 1.24e-13 73.9
Msa1218330 MtrunA17_Chr5g0423031 45.679 81 43 1 31 111 10 89 2.27e-17 80.5
Msa1218330 MtrunA17_Chr4g0010001 44.444 81 44 1 31 111 10 89 3.18e-17 77.4
Msa1218330 MtrunA17_Chr4g0040481 58.333 60 25 0 214 273 157 216 3.64e-16 81.3
Msa1218330 MtrunA17_Chr2g0324891 45.977 87 45 1 214 300 160 244 6.87e-16 80.5
Msa1218330 MtrunA17_Chr1g0198601 50.000 82 40 1 203 283 199 280 7.07e-16 80.1
Msa1218330 MtrunA17_Chr6g0469321 67.308 52 17 0 231 282 70 121 1.81e-14 72.0
Msa1218330 MtrunA17_Chr5g0417521 57.627 59 24 1 211 268 11 69 1.98e-14 75.5
Msa1218330 MtrunA17_Chr5g0422621 40.541 111 53 4 202 300 186 295 3.52e-14 74.7
Msa1218330 MtrunA17_Chr7g0274471 46.739 92 40 2 215 305 218 301 3.69e-14 75.5
Msa1218330 MtrunA17_Chr6g0461641 55.932 59 25 1 211 268 38 96 1.06e-13 73.6
Msa1218330 MtrunA17_Chr2g0321461 55.932 59 25 1 211 268 41 99 2.11e-13 72.4
Msa1218330 MtrunA17_Chr4g0042451 54.237 59 26 1 211 268 13 71 5.00e-13 70.9
Msa1218330 MtrunA17_Chr2g0310011 57.627 59 24 1 211 268 31 89 1.26e-12 69.7
Msa1218330 MtrunA17_Chr4g0045361 53.731 67 30 1 212 277 271 337 1.35e-12 70.1
Msa1218330 MtrunA17_Chr8g0356501 50.649 77 37 1 193 268 15 91 1.44e-12 69.7
Msa1218330 MtrunA17_Chr7g0261911 44.792 96 44 3 211 305 258 345 1.64e-12 70.5
Msa1218330 MtrunA17_Chr5g0402631 55.738 61 26 1 214 273 213 273 1.96e-12 69.3
Msa1218330 MtrunA17_Chr4g0062921 52.941 68 31 1 212 278 232 299 2.13e-12 69.7
Msa1218330 MtrunA17_Chr1g0190301 41.237 97 48 2 210 305 170 258 2.26e-12 69.3
Msa1218330 MtrunA17_Chr1g0197171 60.000 55 21 1 215 268 44 98 3.60e-12 67.8
Msa1218330 MtrunA17_Chr7g0254981 56.364 55 23 1 215 268 50 104 1.39e-11 65.9
Msa1218330 MtrunA17_Chr5g0409731 56.364 55 23 1 215 268 25 79 1.42e-11 65.9
Msa1218330 MtrunA17_Chr2g0290991 58.182 55 22 1 215 268 39 93 3.93e-11 64.7
Msa1218330 MtrunA17_Chr2g0291021 58.182 55 22 1 215 268 49 103 7.53e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218330 AT3G16857.2 53.868 698 238 28 29 680 31 690 0.0 617
Msa1218330 AT3G16857.1 53.481 675 232 26 29 658 31 668 0.0 592
Msa1218330 AT3G16857.3 51.750 657 233 28 70 680 2 620 0.0 534
Msa1218330 AT2G25180.1 47.255 419 179 12 20 414 2 402 3.63e-99 317
Msa1218330 AT2G01760.1 52.492 301 123 3 29 320 5 294 1.67e-93 295
Msa1218330 AT4G31920.1 55.556 279 96 4 29 301 11 267 2.19e-89 290
Msa1218330 AT1G67710.1 63.052 249 81 5 32 273 8 252 3.75e-89 288
Msa1218330 AT2G01760.2 48.024 329 123 4 29 320 5 322 1.24e-87 280
Msa1218330 AT5G58080.1 51.034 290 135 4 29 317 12 295 5.47e-82 272
Msa1218330 AT2G01760.3 49.583 240 101 3 90 320 1 229 5.62e-61 207
Msa1218330 AT1G67710.2 60.209 191 65 5 90 273 1 187 5.94e-58 203
Msa1218330 AT5G49240.1 41.825 263 132 4 28 279 35 287 1.56e-55 191
Msa1218330 AT1G49190.1 35.048 311 161 9 11 302 15 303 3.45e-47 172
Msa1218330 AT3G62670.1 36.859 312 164 10 36 337 42 330 6.41e-46 169
Msa1218330 AT1G67710.3 55.556 171 65 5 110 273 12 178 1.92e-42 160
Msa1218330 AT5G07210.2 34.701 268 145 6 35 274 16 281 2.36e-39 154
Msa1218330 AT5G07210.1 33.696 276 145 7 35 274 16 289 9.26e-37 146
Msa1218330 AT2G27070.1 33.333 270 147 7 35 273 16 283 5.54e-34 137
Msa1218330 AT1G49190.2 42.361 144 78 1 11 154 15 153 6.31e-30 125
Msa1218330 AT3G46640.2 60.759 79 28 1 202 277 128 206 4.11e-24 104
Msa1218330 AT3G46640.1 60.759 79 28 1 202 277 128 206 4.11e-24 104
Msa1218330 AT3G46640.3 60.759 79 28 1 202 277 128 206 6.76e-24 103
Msa1218330 AT5G59570.2 59.036 83 31 2 202 281 125 207 1.80e-23 101
Msa1218330 AT5G59570.1 59.036 83 31 2 202 281 125 207 1.80e-23 101
Msa1218330 AT2G46790.1 39.837 123 69 2 35 153 37 158 2.90e-23 103
Msa1218330 AT2G46790.3 39.837 123 69 2 35 153 37 158 3.15e-23 103
Msa1218330 AT2G40970.1 66.667 66 22 0 208 273 98 163 7.23e-23 99.0
Msa1218330 AT5G05090.1 62.667 75 26 1 201 273 65 139 8.44e-23 99.0
Msa1218330 AT3G10760.1 69.355 62 19 0 212 273 102 163 3.62e-22 99.0
Msa1218330 AT1G68210.1 26.937 271 165 5 35 274 13 281 1.75e-21 100
Msa1218330 AT5G60100.7 39.024 123 70 2 35 153 64 185 3.02e-21 97.4
Msa1218330 AT5G60100.6 39.024 123 70 2 35 153 64 185 3.02e-21 97.4
Msa1218330 AT5G60100.4 39.024 123 70 2 35 153 64 185 3.02e-21 97.4
Msa1218330 AT5G60100.5 39.024 123 70 2 35 153 64 185 4.03e-21 97.8
Msa1218330 AT5G60100.3 39.024 123 70 2 35 153 64 185 4.03e-21 97.8
Msa1218330 AT5G60100.1 39.024 123 70 2 35 153 64 185 4.03e-21 97.8
Msa1218330 AT5G60100.2 39.024 123 70 2 35 153 64 185 7.53e-21 97.1
Msa1218330 AT5G02810.1 39.344 122 71 1 35 153 78 199 1.66e-20 97.1
Msa1218330 AT5G24470.1 37.600 125 73 2 34 154 49 172 2.07e-20 95.9
Msa1218330 AT5G61380.1 35.556 135 82 2 26 155 8 142 1.81e-19 93.2
Msa1218330 AT5G44190.2 62.121 66 25 0 208 273 140 205 2.32e-19 90.9
Msa1218330 AT5G44190.1 62.121 66 25 0 208 273 140 205 2.39e-19 91.3
Msa1218330 AT2G20570.1 42.727 110 62 1 165 273 102 211 3.96e-17 84.7
Msa1218330 AT2G20570.2 48.936 94 46 1 182 273 134 227 2.64e-16 82.4
Msa1218330 AT4G18020.8 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218330 AT4G18020.8 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218330 AT4G18020.11 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218330 AT4G18020.11 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218330 AT4G18020.4 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218330 AT4G18020.4 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218330 AT4G18020.5 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218330 AT4G18020.5 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218330 AT4G18020.10 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218330 AT4G18020.10 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218330 AT4G18020.7 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218330 AT4G18020.7 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218330 AT4G18020.3 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218330 AT4G18020.3 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218330 AT4G18020.2 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218330 AT4G18020.2 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218330 AT4G18020.1 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218330 AT4G18020.1 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218330 AT4G18020.6 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218330 AT4G18020.6 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218330 AT4G18020.9 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218330 AT4G18020.9 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218330 AT3G04030.1 52.000 75 31 3 211 284 41 111 5.71e-14 74.7
Msa1218330 AT3G04030.3 52.000 75 31 3 211 284 41 111 6.10e-14 74.7
Msa1218330 AT5G29000.1 34.682 173 84 6 154 305 110 274 6.24e-14 74.3
Msa1218330 AT5G29000.3 34.682 173 84 6 154 305 110 274 6.24e-14 74.3
Msa1218330 AT5G29000.2 34.682 173 84 6 154 305 153 317 6.47e-14 74.7
Msa1218330 AT5G18240.2 57.627 59 24 1 211 268 41 99 2.45e-13 72.8
Msa1218330 AT5G18240.3 57.627 59 24 1 211 268 41 99 2.45e-13 72.8
Msa1218330 AT5G18240.5 57.627 59 24 1 211 268 41 99 2.65e-13 72.8
Msa1218330 AT5G18240.1 57.627 59 24 1 211 268 41 99 2.65e-13 72.8
Msa1218330 AT5G18240.4 57.627 59 24 1 211 268 41 99 2.65e-13 72.8
Msa1218330 AT5G29000.4 37.594 133 63 4 154 267 153 284 5.17e-13 70.9
Msa1218330 AT3G04030.2 48.649 74 34 2 211 284 41 110 9.12e-13 71.2
Msa1218330 AT1G79430.2 57.627 59 24 1 211 268 30 88 1.70e-12 70.1
Msa1218330 AT3G04450.4 42.424 99 47 3 210 305 193 284 1.99e-12 70.1
Msa1218330 AT3G04450.2 42.424 99 47 3 210 305 193 284 1.99e-12 70.1
Msa1218330 AT3G04450.1 42.424 99 47 3 210 305 233 324 2.04e-12 70.5
Msa1218330 AT1G69580.1 52.542 59 27 1 211 268 30 88 3.09e-12 68.9
Msa1218330 AT1G69580.2 52.542 59 27 1 211 268 30 88 3.14e-12 68.9
Msa1218330 AT1G25550.1 48.611 72 36 1 202 272 196 267 4.20e-12 68.6
Msa1218330 AT3G24120.2 58.182 55 22 1 215 268 41 95 4.51e-12 67.8
Msa1218330 AT3G24120.1 58.182 55 22 1 215 268 41 95 4.57e-12 67.8
Msa1218330 AT3G12730.1 52.174 69 26 2 207 268 9 77 4.90e-12 66.6
Msa1218330 AT5G45580.1 56.364 55 23 1 215 268 7 61 5.53e-12 67.0
Msa1218330 AT5G45580.2 56.364 55 23 1 215 268 23 77 6.98e-12 67.0
Msa1218330 AT2G03500.1 54.839 62 27 1 214 274 232 293 6.99e-12 68.6
Msa1218330 AT4G13640.2 58.182 55 22 1 215 268 37 91 1.08e-11 66.6
Msa1218330 AT4G13640.1 58.182 55 22 1 215 268 37 91 1.09e-11 66.6
Msa1218330 AT3G04450.3 54.237 59 26 1 210 267 233 291 1.31e-11 66.6
Msa1218330 AT2G01060.1 55.738 61 26 1 209 268 9 69 2.54e-11 65.5
Msa1218330 AT1G68670.1 46.914 81 40 2 200 277 198 278 4.31e-11 65.5

Find 204 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATATTCTTCAAACTTC+TGG 0.147805 8_1:+80969632 Msa1218330:three_prime_UTR
TGGAATTTCTGACGGTCTTA+TGG 0.190497 8_1:+80968699 Msa1218330:CDS
TCATCCTGCCCGAAATTATC+AGG 0.256695 8_1:-80969279 None:intergenic
TGAAGGTTCCGATCAGTTTC+CGG 0.268090 8_1:+80966077 Msa1218330:CDS
AACCTCTTCCCTGATAATTT+CGG 0.273856 8_1:+80969270 Msa1218330:CDS
TATCAGGGAAGAGGTTAGTA+TGG 0.283763 8_1:-80969263 None:intergenic
ACCTCTTCCCTGATAATTTC+GGG 0.288070 8_1:+80969271 Msa1218330:CDS
TCAGTACTTAACCTCTTTGT+AGG 0.293342 8_1:+80970184 Msa1218330:three_prime_UTR
TTTAAACTCTTAGAACATAT+TGG 0.300849 8_1:+80966796 Msa1218330:CDS
TTCTTTCTGATTGCAGTTAC+CGG 0.308965 8_1:+80969514 Msa1218330:three_prime_UTR
TTGTGCCATCTGCATCAATA+AGG 0.312582 8_1:-80968587 None:intergenic
CCAAAGTACTTACTAATAAC+TGG 0.319130 8_1:-80966835 None:intergenic
CATTTCAGTGCTTTGATTCA+TGG 0.319626 8_1:-80968800 None:intergenic
AGTGATCATGAGCATACTTT+AGG 0.319751 8_1:+80970155 Msa1218330:three_prime_UTR
TCAGCATCATCAGATGCTTT+TGG 0.321169 8_1:-80967132 None:intergenic
ATTTCAAGCCGAAGTTAATT+CGG 0.322921 8_1:+80968885 Msa1218330:CDS
CTTCTGCTAATGAAGGAAAT+TGG 0.323941 8_1:+80967163 Msa1218330:CDS
GGAAAATCTCCTTTCTCTCT+TGG 0.333648 8_1:+80969129 Msa1218330:CDS
TTCCGGATGTTTATGTTCTT+CGG 0.335747 8_1:+80970021 Msa1218330:three_prime_UTR
CTTCTCCAAATCTCAACCTT+GGG 0.339068 8_1:-80968399 None:intergenic
TGAAGAGGTATGCTTGGGTT+AGG 0.342605 8_1:+80969812 Msa1218330:three_prime_UTR
TGCAAATTGGCGAGTTGCTT+TGG 0.342865 8_1:-80968496 None:intergenic
CTGGAATTGATGAATGTTCC+TGG 0.347527 8_1:+80967968 Msa1218330:CDS
GGAATTTCTGACGGTCTTAT+GGG 0.349221 8_1:+80968700 Msa1218330:CDS
GAACAAGGTAATCTCCAAAA+TGG 0.349947 8_1:+80969162 Msa1218330:CDS
CTAGACTTTGCGCTGGGAGC+TGG 0.350433 8_1:-80968282 None:intergenic
GAAAACCCAAGGTTGAGATT+TGG 0.350909 8_1:+80968394 Msa1218330:CDS
AGCAGAGATGCTTCTTTGCT+TGG 0.351628 8_1:+80969108 Msa1218330:CDS
AAATGTTGCCAGCCACTTGC+AGG 0.358647 8_1:+80968003 Msa1218330:CDS
GAAGTTAATTCGGGAATTAA+AGG 0.362242 8_1:+80968895 Msa1218330:CDS
AGAACATATTGGATTGGAAA+TGG 0.369734 8_1:+80966807 Msa1218330:CDS
TAAAGAAGCCTCGGGTTGTT+TGG 0.371579 8_1:+80967250 Msa1218330:CDS
CCAGCAGAAATCCCGGGATT+GGG 0.372360 8_1:+80968960 Msa1218330:CDS
CAAATATTCTTCAAACTTCT+GGG 0.373124 8_1:+80969633 Msa1218330:three_prime_UTR
CTTTGTACATGAACATGGTT+TGG 0.376891 8_1:+80970081 Msa1218330:three_prime_UTR
TGAAAATTCAACAAGGGTTA+AGG 0.379057 8_1:+80969215 Msa1218330:CDS
CTGGGAGTAGTGTACTATAA+TGG 0.381832 8_1:+80969651 Msa1218330:three_prime_UTR
CCAAGATTACCGAACCTCTT+GGG 0.383663 8_1:+80968658 Msa1218330:CDS
AATGTTGACTGCCACCATTT+TGG 0.384208 8_1:-80969176 None:intergenic
CATGAGTGCACTTCTGAAAC+AGG 0.384874 8_1:+80969305 Msa1218330:CDS
TTTCAAGCCGAAGTTAATTC+GGG 0.385444 8_1:+80968886 Msa1218330:CDS
TGCTGCAGACTGGTGCAAAT+TGG 0.390973 8_1:-80968509 None:intergenic
AACGAAGAGCTCTGTGGAAC+AGG 0.393856 8_1:-80968766 None:intergenic
TTTCTCTCTTGGAGAAGGCT+TGG 0.399650 8_1:+80969140 Msa1218330:CDS
CAGCAGCCACAAACTGTTGA+TGG 0.399900 8_1:-80967284 None:intergenic
TCTGTTAGTAATTTCCCTCT+TGG 0.407707 8_1:+80968823 Msa1218330:CDS
CGAGCTCCATCAACAGTTTG+TGG 0.408027 8_1:+80967278 Msa1218330:CDS
CCTTCTCCAAATCTCAACCT+TGG 0.410833 8_1:-80968400 None:intergenic
CCCAAGAGGTTCGGTAATCT+TGG 0.413044 8_1:-80968658 None:intergenic
TTCGGCTTGAAATGAGCCTT+TGG 0.414980 8_1:-80968875 None:intergenic
GTGATCATGAGCATACTTTA+GGG 0.418715 8_1:+80970156 Msa1218330:three_prime_UTR
TTCAAAGCCTCAATACGAAC+AGG 0.419602 8_1:-80967021 None:intergenic
TAGGAATCTAGACTAATAGA+AGG 0.419625 8_1:+80970203 Msa1218330:three_prime_UTR
GGCTGAGAAATGAATTATTC+TGG 0.423210 8_1:-80968189 None:intergenic
CCCAATCCCGGGATTTCTGC+TGG 0.423497 8_1:-80968960 None:intergenic
TTCCCTCTTGGAAGCACTCC+AGG 0.424109 8_1:+80968835 Msa1218330:CDS
AGCCCACAAGAGGCATCATT+TGG 0.424795 8_1:+80968208 Msa1218330:CDS
TGCTTTGGCTCCATGTTAGT+AGG 0.429194 8_1:-80968481 None:intergenic
ACCAGCAGAAATCCCGGGAT+TGG 0.435479 8_1:+80968959 Msa1218330:CDS
AGTCCCCGCTTCTGCTACAC+AGG 0.436130 8_1:+80968558 Msa1218330:CDS
TTGAGGCTTTGAAGAACATA+TGG 0.437862 8_1:+80967031 Msa1218330:CDS
GTTCTTGAAGAGGTATGCTT+GGG 0.439729 8_1:+80969807 Msa1218330:three_prime_UTR
CAAGGGACTGTGCTGCAGAC+TGG 0.442581 8_1:-80968519 None:intergenic
GAAGAGGTATGCTTGGGTTA+GGG 0.445920 8_1:+80969813 Msa1218330:three_prime_UTR
ACTCTTCAAGCAGCAGGACT+TGG 0.447810 8_1:+80968307 Msa1218330:CDS
ACTCTTAGAACATATTGGAT+TGG 0.448527 8_1:+80966801 Msa1218330:CDS
GATTAAACCTGTTCGTATTG+AGG 0.449126 8_1:+80967014 Msa1218330:CDS
ATTTCAGTGCTTTGATTCAT+GGG 0.452203 8_1:-80968799 None:intergenic
TTAGTATGGGAGCTCGCGTC+AGG 0.455250 8_1:-80969249 None:intergenic
CTTTGATCCATGAGAGGCAT+TGG 0.455626 8_1:-80968355 None:intergenic
TGTACTATAATGGTTTAGTC+TGG 0.456530 8_1:+80969661 Msa1218330:three_prime_UTR
TGACTTTGACGGGTATTCTC+TGG 0.456582 8_1:+80969458 Msa1218330:CDS
AGAATGAGTTTGACTTTGAC+GGG 0.456863 8_1:+80969448 Msa1218330:CDS
ATCACTGTCTTCATCTCATA+AGG 0.457292 8_1:-80970138 Msa1218340:intron
TCCAAGATTACCGAACCTCT+TGG 0.457743 8_1:+80968657 Msa1218330:CDS
TGTTCTTGAAGAGGTATGCT+TGG 0.458201 8_1:+80969806 Msa1218330:three_prime_UTR
CTTCAAACTCTTGCAGCAGC+TGG 0.460273 8_1:+80968259 Msa1218330:CDS
GAAGAACATAAAATTAAAAG+AGG 0.460919 8_1:-80969930 Msa1218340:intron
TCGGGAATTAAAGGATCAGC+TGG 0.463527 8_1:+80968904 Msa1218330:CDS
AGGCTTACCAATGCCTCTCA+TGG 0.463932 8_1:+80968348 Msa1218330:CDS
TATTCGTCTTCTGCTAATGA+AGG 0.466948 8_1:+80967156 Msa1218330:CDS
AACTGAACCAGCAGAAATCC+CGG 0.470254 8_1:+80968953 Msa1218330:CDS
TAGCATTGGACCTCTAGGTT+GGG 0.471457 8_1:-80968611 None:intergenic
GGTAGGTCAACTGTGAAATC+AGG 0.471735 8_1:+80968328 Msa1218330:CDS
AAACTGATCGGAACCTTCAC+CGG 0.472593 8_1:-80966073 None:intergenic
TTCAAAGAGAACGCAAGAAT+CGG 0.475865 8_1:-80965882 None:intergenic
AATCTAAGCAACAACGGAAA+AGG 0.481027 8_1:+80966009 Msa1218330:CDS
TCACTTAGCATTGGACCTCT+AGG 0.481945 8_1:-80968616 None:intergenic
TGCCAAATGATGCCTCTTGT+GGG 0.486957 8_1:-80968210 None:intergenic
TTTCCCTGTGTAGCAGAAGC+GGG 0.487937 8_1:-80968562 None:intergenic
AAACCAACAAATCTTCTTCA+CGG 0.488919 8_1:+80968454 Msa1218330:CDS
ACTCCGTGAAGAAGATTTGT+TGG 0.489018 8_1:-80968457 None:intergenic
CAGCAGAAATCCCGGGATTG+GGG 0.489487 8_1:+80968961 Msa1218330:CDS
TCTCCTTTCTCTCTTGGAGA+AGG 0.491761 8_1:+80969135 Msa1218330:CDS
AGTTTAAATCCATCCATGTC+TGG 0.492706 8_1:-80966781 None:intergenic
TTTAATTCCCGAATTAACTT+CGG 0.493406 8_1:-80968893 None:intergenic
GGGCAGTCTACTGTGTCAAA+TGG 0.502999 8_1:+80968679 Msa1218330:CDS
AAGCCTTCTCCAAGAGAGAA+AGG 0.504157 8_1:-80969138 None:intergenic
TGTGCCATCTGCATCAATAA+GGG 0.506429 8_1:-80968586 None:intergenic
TGGAAAGATACGGAGCAGTC+GGG 0.506488 8_1:+80967084 Msa1218330:CDS
GACCGAAGAACATAAACATC+CGG 0.506870 8_1:-80970023 Msa1218340:intron
CTACTCAGAGAGAACAAGAA+TGG 0.509140 8_1:+80966727 Msa1218330:CDS
TTCTTGCAGCAGGAAGGCAT+TGG 0.511048 8_1:+80969420 Msa1218330:intron
CCAATGCTAAGTGAAAATAC+TGG 0.512986 8_1:+80968625 Msa1218330:CDS
GTATGATACCTGCAAGTGGC+TGG 0.513699 8_1:-80968011 None:intergenic
ACATATGGCAGCATGTGGTT+CGG 0.513719 8_1:+80967046 Msa1218330:CDS
TTGCGCACATGTCTTTATGA+AGG 0.513753 8_1:+80966162 Msa1218330:CDS
GTAGACTGCCCCAAGAGGTT+CGG 0.516395 8_1:-80968667 None:intergenic
AGAAGGGATGATGAAGAGGA+AGG 0.517568 8_1:+80967201 Msa1218330:CDS
ACATCGATGTTGCCATGTAA+AGG 0.519974 8_1:-80969030 None:intergenic
AGAAGCATCTCTGCTATGTC+CGG 0.523262 8_1:-80969100 None:intergenic
AGGAATCATATGTTAGACCT+TGG 0.524315 8_1:-80968993 None:intergenic
GAGAATGAGTTTGACTTTGA+CGG 0.527613 8_1:+80969447 Msa1218330:CDS
AAAGAGAAGGGATGATGAAG+AGG 0.527771 8_1:+80967197 Msa1218330:CDS
GTGCCAAATGATGCCTCTTG+TGG 0.529194 8_1:-80968211 None:intergenic
CTTCCCTGATAATTTCGGGC+AGG 0.529625 8_1:+80969275 Msa1218330:CDS
CGTCAACACTAAAGAAGCCT+CGG 0.531313 8_1:+80967241 Msa1218330:CDS
TGGTAAAAGTGTTGTTATGA+AGG 0.536755 8_1:+80966963 Msa1218330:CDS
TGGAATTGATGAATGTTCCT+GGG 0.540747 8_1:+80967969 Msa1218330:CDS
CTAGCCACTCTTCAAGCAGC+AGG 0.540998 8_1:+80968301 Msa1218330:CDS
TCAACAGTTTGTGGCTGCTG+TGG 0.541281 8_1:+80967287 Msa1218330:CDS
CAGTCTGCAGCACAGTCCCT+TGG 0.541662 8_1:+80968520 Msa1218330:CDS
TTAGCATTGGACCTCTAGGT+TGG 0.542224 8_1:-80968612 None:intergenic
TTGTGTTTCTTGCAGCAGGA+AGG 0.544167 8_1:+80969414 Msa1218330:intron
CAAGGTTGAGATTTGGAGAA+GGG 0.545110 8_1:+80968401 Msa1218330:CDS
CAAGATTACCGAACCTCTTG+GGG 0.546140 8_1:+80968659 Msa1218330:CDS
GGCACGATTTCGTCAATGAA+CGG 0.547334 8_1:+80968229 Msa1218330:CDS
CTCGCATATTCATGTTGCCA+AGG 0.547462 8_1:-80968537 None:intergenic
TAGTCTAGATTCCTACAAAG+AGG 0.550180 8_1:-80970195 Msa1218340:intron
ACTGCTACTACTATGAAATC+CGG 0.552368 8_1:+80966054 Msa1218330:CDS
GTGGAAAGATACGGAGCAGT+CGG 0.552841 8_1:+80967083 Msa1218330:CDS
TTCATTTCTCAGCCCACAAG+AGG 0.554489 8_1:+80968198 Msa1218330:CDS
GAGCAGAAGAAAAGCCCTGA+TGG 0.559461 8_1:-80969071 None:intergenic
GCCCGAAATTATCAGGGAAG+AGG 0.559846 8_1:-80969272 None:intergenic
CAATGCCTCTCATGGATCAA+AGG 0.561353 8_1:+80968356 Msa1218330:CDS
CTTGGAGAAGGCTTGGAACA+AGG 0.563016 8_1:+80969147 Msa1218330:CDS
TCGCATGCAAATCCTTTACA+TGG 0.566200 8_1:+80969018 Msa1218330:CDS
CAGCTGCTGCAAGAGTTTGA+AGG 0.567437 8_1:-80968258 None:intergenic
GGAGAAACTCGAGAAAGAGA+AGG 0.568448 8_1:+80967184 Msa1218330:CDS
AGGGCAGAATTGCAGAAGCA+AGG 0.569014 8_1:+80969832 Msa1218330:three_prime_UTR
AAAGAACGAGTGGAAAGATA+CGG 0.569117 8_1:+80967074 Msa1218330:CDS
CTCAAGAATCATAAGACACG+TGG 0.569208 8_1:-80966133 None:intergenic
GAATTCTTTGTACATGAACA+TGG 0.574074 8_1:+80970076 Msa1218330:three_prime_UTR
TAACTGCAATCAGAAAGAAC+TGG 0.577103 8_1:-80969510 None:intergenic
AAATCCCTTATTGATGCAGA+TGG 0.581980 8_1:+80968582 Msa1218330:CDS
TCACGGAGTTCCTACTAACA+TGG 0.585473 8_1:+80968471 Msa1218330:CDS
AATATCGATTGTATCTTCGA+AGG 0.588508 8_1:+80968146 Msa1218330:CDS
GTGGCTGCTGTGGATCAACT+AGG 0.590323 8_1:+80967297 Msa1218330:CDS
GAGAAACTCGAGAAAGAGAA+GGG 0.591527 8_1:+80967185 Msa1218330:CDS
TAAACCCGCCGGAAACTGAT+CGG 0.593099 8_1:-80966085 None:intergenic
GTAGTGATGTCTGCCGATGA+TGG 0.594746 8_1:+80966943 Msa1218330:intron
ATTTCCCTGTGTAGCAGAAG+CGG 0.596362 8_1:-80968563 None:intergenic
ATCAGGGAAGAGGTTAGTAT+GGG 0.598648 8_1:-80969262 None:intergenic
GGTTCCGATCAGTTTCCGGC+GGG 0.599863 8_1:+80966081 Msa1218330:CDS
ACTACTATGAAATCCGGTGA+AGG 0.600055 8_1:+80966060 Msa1218330:CDS
CCAAGGTTGAGATTTGGAGA+AGG 0.603069 8_1:+80968400 Msa1218330:CDS
AGAGTGGCTAGACTTTGCGC+TGG 0.604456 8_1:-80968289 None:intergenic
GTGCATATGCCAGACATGGA+TGG 0.605390 8_1:+80966772 Msa1218330:CDS
TTATGTTGAAAATTCAACAA+GGG 0.606022 8_1:+80969209 Msa1218330:CDS
GAATTTCTGACGGTCTTATG+GGG 0.610921 8_1:+80968701 Msa1218330:CDS
GAGTGGCTAGACTTTGCGCT+GGG 0.613125 8_1:-80968288 None:intergenic
CAACATCGATGTCTCTCCGT+CGG 0.614346 8_1:+80969041 Msa1218330:CDS
ATATCTAGTATCACAACCAA+AGG 0.615031 8_1:+80968859 Msa1218330:CDS
AGTACTTACTAATAACTGGA+AGG 0.615916 8_1:-80966831 None:intergenic
GGTAAAAGTGTTGTTATGAA+GGG 0.618959 8_1:+80966964 Msa1218330:CDS
GTCAACACTAAAGAAGCCTC+GGG 0.618987 8_1:+80967242 Msa1218330:CDS
AAGTCCTGCTGCTTGAAGAG+TGG 0.619281 8_1:-80968305 None:intergenic
GCAGTCGGGTAGTGCTGACG+AGG 0.619983 8_1:+80967098 Msa1218330:CDS
AACAGTATGATACCTGCAAG+TGG 0.620491 8_1:-80968015 None:intergenic
GTGTCAAATGGAATTTCTGA+CGG 0.620630 8_1:+80968691 Msa1218330:CDS
AGCAGAAATCCCGGGATTGG+GGG 0.622120 8_1:+80968962 Msa1218330:CDS
TTGTATCTTCGAAGGCTGAG+TGG 0.625218 8_1:+80968154 Msa1218330:CDS
GAAGAACATATGGCAGCATG+TGG 0.630309 8_1:+80967041 Msa1218330:CDS
CATCCTGCCCGAAATTATCA+GGG 0.630656 8_1:-80969278 None:intergenic
AGGTTCCTTTGATCCATGAG+AGG 0.631553 8_1:-80968361 None:intergenic
CCCTGATGGACTAAAACCGA+CGG 0.643382 8_1:-80969057 None:intergenic
ATAAATCTGCAAACTCGCGT+AGG 0.643837 8_1:+80969860 Msa1218330:three_prime_UTR
CAAGGTAATCTCCAAAATGG+TGG 0.644703 8_1:+80969165 Msa1218330:CDS
TCGCATATTCATGTTGCCAA+GGG 0.645505 8_1:-80968536 None:intergenic
ACTGAACCAGCAGAAATCCC+GGG 0.645616 8_1:+80968954 Msa1218330:CDS
GTTGTCGAATAATTTAGACT+CGG 0.649630 8_1:-80969594 None:intergenic
AGGTTCCGATCAGTTTCCGG+CGG 0.652193 8_1:+80966080 Msa1218330:CDS
TACCTGGAGTGCTTCCAAGA+GGG 0.655640 8_1:-80968837 None:intergenic
GTTGTGATACTAGATATACC+TGG 0.656765 8_1:-80968853 None:intergenic
TTCCCTGTGTAGCAGAAGCG+GGG 0.660017 8_1:-80968561 None:intergenic
TTCAAGCAGCAGGACTTGGT+AGG 0.662359 8_1:+80968311 Msa1218330:CDS
ACACAGTAGACTGCCCCAAG+AGG 0.664618 8_1:-80968672 None:intergenic
TTTATGTTGAAAATTCAACA+AGG 0.669918 8_1:+80969208 Msa1218330:CDS
TAAAGGATTTGCATGCGATG+AGG 0.672320 8_1:-80969013 None:intergenic
TGATGTGCATATGCCAGACA+TGG 0.676897 8_1:+80966768 Msa1218330:CDS
ACGAGAACTCGTAAACCCGC+CGG 0.676939 8_1:-80966096 None:intergenic
TCTTATGGGGAGAAATAACA+TGG 0.679947 8_1:+80968714 Msa1218330:CDS
CAGTCGGGTAGTGCTGACGA+GGG 0.681841 8_1:+80967099 Msa1218330:CDS
ATACCTGGAGTGCTTCCAAG+AGG 0.686422 8_1:-80968838 None:intergenic
GTGACAGCAACTATTTACAC+CGG 0.687900 8_1:-80969533 None:intergenic
TCGACAGACCAAACAACCCG+AGG 0.690366 8_1:-80967258 None:intergenic
TCAAGAATCATAAGACACGT+GGG 0.691685 8_1:-80966132 None:intergenic
GGGTTTACGAGTTCTCGTTG+TGG 0.701370 8_1:+80966101 Msa1218330:CDS
ATGATGAATCTAAGCAACAA+CGG 0.705147 8_1:+80966003 Msa1218330:CDS
GTCCCCGCTTCTGCTACACA+GGG 0.706393 8_1:+80968559 Msa1218330:CDS
ATGGCACAATCCCAACCTAG+AGG 0.710994 8_1:+80968601 Msa1218330:CDS
TTGACCGCATAAAATGCACA+AGG 0.724437 8_1:+80969721 Msa1218330:three_prime_UTR
TGTGGAACAGGATTAAACGA+AGG 0.733577 8_1:-80968754 None:intergenic
GTTATGAAGGGTGTAACACA+TGG 0.742807 8_1:+80966976 Msa1218330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGGTTTTAAAGAAAATT+TGG - chr8_1:80967564-80967583 None:intergenic 15.0%
!!! TATAATTCTTTTAAAAACAC+TGG - chr8_1:80967822-80967841 None:intergenic 15.0%
!!! AAAAAATGATTTGTTTGTAA+TGG - chr8_1:80969396-80969415 None:intergenic 15.0%
!!! CATGTGTAAATATTTTTATT+TGG + chr8_1:80969968-80969987 Msa1218330:three_prime_UTR 15.0%
!!! TTATTTGTGATTTTATGTTA+TGG + chr8_1:80970107-80970126 Msa1218330:three_prime_UTR 15.0%
!!! TCATGTTTTGTTTATTGTTT+TGG + chr8_1:80965965-80965984 Msa1218330:five_prime_UTR 20.0%
!!! TTTTTGAATAGTTTGCATAT+GGG - chr8_1:80966317-80966336 None:intergenic 20.0%
!!! TTTTTTGAATAGTTTGCATA+TGG - chr8_1:80966318-80966337 None:intergenic 20.0%
!! TCAAAATGAAAATCAAAATC+TGG - chr8_1:80966523-80966542 None:intergenic 20.0%
!!! TTTAAAATACCATTGAAACA+TGG + chr8_1:80966552-80966571 Msa1218330:intron 20.0%
!! TTTAAACTCTTAGAACATAT+TGG + chr8_1:80966796-80966815 Msa1218330:CDS 20.0%
!!! ACTATTGATTCATTTCTTAT+TGG + chr8_1:80967651-80967670 Msa1218330:intron 20.0%
!! ATCTATTATAGAACTAATAG+AGG - chr8_1:80967679-80967698 None:intergenic 20.0%
!!! ATCAATTCCAGAATTTTTTT+GGG - chr8_1:80967959-80967978 None:intergenic 20.0%
!!! AGGGATATAAAATTTAACTT+GGG - chr8_1:80968062-80968081 None:intergenic 20.0%
!! TAGGGATATAAAATTTAACT+TGG - chr8_1:80968063-80968082 None:intergenic 20.0%
!! TCGTTAAAAATATCATAACT+TGG - chr8_1:80968934-80968953 None:intergenic 20.0%
!! TTTATGTTGAAAATTCAACA+AGG + chr8_1:80969208-80969227 Msa1218330:CDS 20.0%
!! TTATGTTGAAAATTCAACAA+GGG + chr8_1:80969209-80969228 Msa1218330:CDS 20.0%
!! GAAGAACATAAAATTAAAAG+AGG - chr8_1:80969933-80969952 Msa1218340:intron 20.0%
! GAATAATTAAGATTCAGTTG+TGG + chr8_1:80967489-80967508 Msa1218330:intron 25.0%
! AATCAATAGTAGAACTTCTA+GGG - chr8_1:80967641-80967660 None:intergenic 25.0%
! CATACAAGAAAAATGTATGA+CGG - chr8_1:80967759-80967778 None:intergenic 25.0%
!!! ATTCTTTTAAAAACACTGGA+TGG - chr8_1:80967818-80967837 None:intergenic 25.0%
! AGGTACTCAAACAAATATTA+GGG - chr8_1:80967865-80967884 None:intergenic 25.0%
!! AAGGTACTCAAACAAATATT+AGG - chr8_1:80967866-80967885 None:intergenic 25.0%
! AGAAATATCAAACTTGAATC+AGG - chr8_1:80967922-80967941 None:intergenic 25.0%
!!! CATCAATTCCAGAATTTTTT+TGG - chr8_1:80967960-80967979 None:intergenic 25.0%
! TTTAATTCCCGAATTAACTT+CGG - chr8_1:80968896-80968915 None:intergenic 25.0%
!! GTTGAATTTTCAACATAAAG+AGG - chr8_1:80969207-80969226 None:intergenic 25.0%
! CTCATAATTCATTCTTTCTA+TGG + chr8_1:80969336-80969355 Msa1218330:intron 25.0%
! TCAAATATTCTTCAAACTTC+TGG + chr8_1:80969632-80969651 Msa1218330:three_prime_UTR 25.0%
! CAAATATTCTTCAAACTTCT+GGG + chr8_1:80969633-80969652 Msa1218330:three_prime_UTR 25.0%
!! TCTAGCAATGTTCTAATTTT+AGG + chr8_1:80969782-80969801 Msa1218330:three_prime_UTR 25.0%
!! CTAGCAATGTTCTAATTTTA+GGG + chr8_1:80969783-80969802 Msa1218330:three_prime_UTR 25.0%
ATGATGAATCTAAGCAACAA+CGG + chr8_1:80966003-80966022 Msa1218330:CDS 30.0%
CGCTTAATTACTTGATTAGT+TGG + chr8_1:80966254-80966273 Msa1218330:intron 30.0%
!!! GACCTTTTTTTCTTCTTCTT+TGG + chr8_1:80966426-80966445 Msa1218330:intron 30.0%
AGCCAAAGAAGAAGAAAAAA+AGG - chr8_1:80966431-80966450 None:intergenic 30.0%
!!! TTTTTTTCTTCTTCTTTGGC+TGG + chr8_1:80966430-80966449 Msa1218330:intron 30.0%
ACTCTTAGAACATATTGGAT+TGG + chr8_1:80966801-80966820 Msa1218330:CDS 30.0%
! AGAACATATTGGATTGGAAA+TGG + chr8_1:80966807-80966826 Msa1218330:CDS 30.0%
AGTACTTACTAATAACTGGA+AGG - chr8_1:80966834-80966853 None:intergenic 30.0%
! CCAAAGTACTTACTAATAAC+TGG - chr8_1:80966838-80966857 None:intergenic 30.0%
CCAGTTATTAGTAAGTACTT+TGG + chr8_1:80966835-80966854 Msa1218330:intron 30.0%
! AACAACACTTTTACCATCAT+CGG - chr8_1:80966959-80966978 None:intergenic 30.0%
!! TGGTAAAAGTGTTGTTATGA+AGG + chr8_1:80966963-80966982 Msa1218330:CDS 30.0%
!! GGTAAAAGTGTTGTTATGAA+GGG + chr8_1:80966964-80966983 Msa1218330:CDS 30.0%
!! AAAAACTTTTGAAGAGTCCT+GGG - chr8_1:80967344-80967363 None:intergenic 30.0%
!! AAAAAACTTTTGAAGAGTCC+TGG - chr8_1:80967345-80967364 None:intergenic 30.0%
ATAGAGAACTAAGAAACTGT+AGG - chr8_1:80967615-80967634 None:intergenic 30.0%
GAATCAATAGTAGAACTTCT+AGG - chr8_1:80967642-80967661 None:intergenic 30.0%
TAATAGATTGAACTGCTTCA+AGG + chr8_1:80967691-80967710 Msa1218330:intron 30.0%
AATAGATTGAACTGCTTCAA+GGG + chr8_1:80967692-80967711 Msa1218330:intron 30.0%
! TATATCCCTATGTTTTCTTG+TGG + chr8_1:80968073-80968092 Msa1218330:intron 30.0%
! AATATCGATTGTATCTTCGA+AGG + chr8_1:80968146-80968165 Msa1218330:CDS 30.0%
! TTGGGTTTTCAAAACTGAAA+AGG - chr8_1:80968384-80968403 None:intergenic 30.0%
!!! TTTTCAGTTTTGAAAACCCA+AGG + chr8_1:80968383-80968402 Msa1218330:CDS 30.0%
AAACCAACAAATCTTCTTCA+CGG + chr8_1:80968454-80968473 Msa1218330:CDS 30.0%
ATTTCAGTGCTTTGATTCAT+GGG - chr8_1:80968802-80968821 None:intergenic 30.0%
ATATCTAGTATCACAACCAA+AGG + chr8_1:80968859-80968878 Msa1218330:CDS 30.0%
ATTTCAAGCCGAAGTTAATT+CGG + chr8_1:80968885-80968904 Msa1218330:CDS 30.0%
GAAGTTAATTCGGGAATTAA+AGG + chr8_1:80968895-80968914 Msa1218330:CDS 30.0%
TGAAAATTCAACAAGGGTTA+AGG + chr8_1:80969215-80969234 Msa1218330:CDS 30.0%
GTTGTCGAATAATTTAGACT+CGG - chr8_1:80969597-80969616 None:intergenic 30.0%
TGTACTATAATGGTTTAGTC+TGG + chr8_1:80969661-80969680 Msa1218330:three_prime_UTR 30.0%
! TTGTTCTGACTATTCTTTTC+CGG + chr8_1:80970004-80970023 Msa1218330:three_prime_UTR 30.0%
GAATTCTTTGTACATGAACA+TGG + chr8_1:80970076-80970095 Msa1218330:three_prime_UTR 30.0%
TTCAAAGAGAACGCAAGAAT+CGG - chr8_1:80965885-80965904 None:intergenic 35.0%
AATCTAAGCAACAACGGAAA+AGG + chr8_1:80966009-80966028 Msa1218330:CDS 35.0%
ACTGCTACTACTATGAAATC+CGG + chr8_1:80966054-80966073 Msa1218330:CDS 35.0%
TCAAGAATCATAAGACACGT+GGG - chr8_1:80966135-80966154 None:intergenic 35.0%
AGCTCAAAACCATGTTTCAA+TGG - chr8_1:80966564-80966583 None:intergenic 35.0%
AGTTTAAATCCATCCATGTC+TGG - chr8_1:80966784-80966803 None:intergenic 35.0%
GATTAAACCTGTTCGTATTG+AGG + chr8_1:80967014-80967033 Msa1218330:CDS 35.0%
!! TTGAGGCTTTGAAGAACATA+TGG + chr8_1:80967031-80967050 Msa1218330:CDS 35.0%
AAAGAACGAGTGGAAAGATA+CGG + chr8_1:80967074-80967093 Msa1218330:CDS 35.0%
TATTCGTCTTCTGCTAATGA+AGG + chr8_1:80967156-80967175 Msa1218330:CDS 35.0%
CTTCTGCTAATGAAGGAAAT+TGG + chr8_1:80967163-80967182 Msa1218330:CDS 35.0%
! GTCTTTTAGATAGATCTGCA+CGG - chr8_1:80967390-80967409 None:intergenic 35.0%
GCAATCAAGTTTCATCCTAT+TGG + chr8_1:80967525-80967544 Msa1218330:intron 35.0%
TCAAGTTTCATCCTATTGGT+TGG + chr8_1:80967529-80967548 Msa1218330:intron 35.0%
GAGAAAGACAATACGCTAAA+TGG - chr8_1:80967581-80967600 None:intergenic 35.0%
GACGGAAAATGAATACATTC+AGG - chr8_1:80967741-80967760 None:intergenic 35.0%
AAACCTTAGCAATCTCATCT+TGG + chr8_1:80967788-80967807 Msa1218330:intron 35.0%
!! ACCTTAGCTATGAAGTATTG+TGG + chr8_1:80967881-80967900 Msa1218330:intron 35.0%
ACCACAATACTTCATAGCTA+AGG - chr8_1:80967885-80967904 None:intergenic 35.0%
TGGAATTGATGAATGTTCCT+GGG + chr8_1:80967969-80967988 Msa1218330:CDS 35.0%
GATGACCACAAGAAAACATA+GGG - chr8_1:80968081-80968100 None:intergenic 35.0%
AGATGACCACAAGAAAACAT+AGG - chr8_1:80968082-80968101 None:intergenic 35.0%
! GTTTTCTTGTGGTCATCTAA+CGG + chr8_1:80968084-80968103 Msa1218330:intron 35.0%
GGCTGAGAAATGAATTATTC+TGG - chr8_1:80968192-80968211 None:intergenic 35.0%
AAATCCCTTATTGATGCAGA+TGG + chr8_1:80968582-80968601 Msa1218330:CDS 35.0%
! CCAGTATTTTCACTTAGCAT+TGG - chr8_1:80968628-80968647 None:intergenic 35.0%
CCAATGCTAAGTGAAAATAC+TGG + chr8_1:80968625-80968644 Msa1218330:CDS 35.0%
GTGTCAAATGGAATTTCTGA+CGG + chr8_1:80968691-80968710 Msa1218330:CDS 35.0%
TCTTATGGGGAGAAATAACA+TGG + chr8_1:80968714-80968733 Msa1218330:CDS 35.0%
CATTTCAGTGCTTTGATTCA+TGG - chr8_1:80968803-80968822 None:intergenic 35.0%
TCTGTTAGTAATTTCCCTCT+TGG + chr8_1:80968823-80968842 Msa1218330:CDS 35.0%
GTTGTGATACTAGATATACC+TGG - chr8_1:80968856-80968875 None:intergenic 35.0%
TTTCAAGCCGAAGTTAATTC+GGG + chr8_1:80968886-80968905 Msa1218330:CDS 35.0%
AGGAATCATATGTTAGACCT+TGG - chr8_1:80968996-80969015 None:intergenic 35.0%
! TTTTCTTCTGCTCAACAAAC+CGG + chr8_1:80969081-80969100 Msa1218330:CDS 35.0%
GAACAAGGTAATCTCCAAAA+TGG + chr8_1:80969162-80969181 Msa1218330:CDS 35.0%
AACCTCTTCCCTGATAATTT+CGG + chr8_1:80969270-80969289 Msa1218330:CDS 35.0%
!!! TTTTTTGTGTTTCTTGCAGC+AGG + chr8_1:80969410-80969429 Msa1218330:intron 35.0%
! GAGAATGAGTTTGACTTTGA+CGG + chr8_1:80969447-80969466 Msa1218330:CDS 35.0%
! AGAATGAGTTTGACTTTGAC+GGG + chr8_1:80969448-80969467 Msa1218330:CDS 35.0%
TAACTGCAATCAGAAAGAAC+TGG - chr8_1:80969513-80969532 None:intergenic 35.0%
TTCTTTCTGATTGCAGTTAC+CGG + chr8_1:80969514-80969533 Msa1218330:three_prime_UTR 35.0%
!!! ATTTTAGGGTGTTCTTGAAG+AGG + chr8_1:80969797-80969816 Msa1218330:three_prime_UTR 35.0%
TTCCGGATGTTTATGTTCTT+CGG + chr8_1:80970021-80970040 Msa1218330:three_prime_UTR 35.0%
CTTTGTACATGAACATGGTT+TGG + chr8_1:80970081-80970100 Msa1218330:three_prime_UTR 35.0%
ATCACTGTCTTCATCTCATA+AGG - chr8_1:80970141-80970160 Msa1218340:intron 35.0%
AGTGATCATGAGCATACTTT+AGG + chr8_1:80970155-80970174 Msa1218330:three_prime_UTR 35.0%
GTGATCATGAGCATACTTTA+GGG + chr8_1:80970156-80970175 Msa1218330:three_prime_UTR 35.0%
TCAGTACTTAACCTCTTTGT+AGG + chr8_1:80970184-80970203 Msa1218330:three_prime_UTR 35.0%
TAGTCTAGATTCCTACAAAG+AGG - chr8_1:80970198-80970217 Msa1218340:intron 35.0%
ACTACTATGAAATCCGGTGA+AGG + chr8_1:80966060-80966079 Msa1218330:CDS 40.0%
CTCAAGAATCATAAGACACG+TGG - chr8_1:80966136-80966155 None:intergenic 40.0%
TTGCGCACATGTCTTTATGA+AGG + chr8_1:80966162-80966181 Msa1218330:CDS 40.0%
!!! GAAACATGGTTTTGAGCTAC+TGG + chr8_1:80966566-80966585 Msa1218330:intron 40.0%
CTACTCAGAGAGAACAAGAA+TGG + chr8_1:80966727-80966746 Msa1218330:CDS 40.0%
! GTTATGAAGGGTGTAACACA+TGG + chr8_1:80966976-80966995 Msa1218330:CDS 40.0%
TTCAAAGCCTCAATACGAAC+AGG - chr8_1:80967024-80967043 None:intergenic 40.0%
TTCGGAAGAAAAAGAACGAG+TGG + chr8_1:80967064-80967083 Msa1218330:CDS 40.0%
! TCAGCATCATCAGATGCTTT+TGG - chr8_1:80967135-80967154 None:intergenic 40.0%
GAGAAACTCGAGAAAGAGAA+GGG + chr8_1:80967185-80967204 Msa1218330:CDS 40.0%
AAAGAGAAGGGATGATGAAG+AGG + chr8_1:80967197-80967216 Msa1218330:CDS 40.0%
TAGATCTGCACGGAAAACAA+AGG - chr8_1:80967380-80967399 None:intergenic 40.0%
GGTTTCTGATACCAACCAAT+AGG - chr8_1:80967543-80967562 None:intergenic 40.0%
GAGATTGCTAAGGTTTGTGA+TGG - chr8_1:80967784-80967803 None:intergenic 40.0%
GAACCAAGATGAGATTGCTA+AGG - chr8_1:80967794-80967813 None:intergenic 40.0%
! AGTTTGATATTTCTGCGCAG+AGG + chr8_1:80967928-80967947 Msa1218330:intron 40.0%
GGCTGTTCCCAAAAAAATTC+TGG + chr8_1:80967949-80967968 Msa1218330:CDS 40.0%
CTGGAATTGATGAATGTTCC+TGG + chr8_1:80967968-80967987 Msa1218330:CDS 40.0%
AACAGTATGATACCTGCAAG+TGG - chr8_1:80968018-80968037 None:intergenic 40.0%
GTTATTCGCCTACTTCAGAA+AGG + chr8_1:80968035-80968054 Msa1218330:intron 40.0%
GAAAACCCAAGGTTGAGATT+TGG + chr8_1:80968394-80968413 Msa1218330:CDS 40.0%
CTTCTCCAAATCTCAACCTT+GGG - chr8_1:80968402-80968421 None:intergenic 40.0%
CAAGGTTGAGATTTGGAGAA+GGG + chr8_1:80968401-80968420 Msa1218330:CDS 40.0%
! GGGCAACAACAACTTTTGAA+TGG + chr8_1:80968421-80968440 Msa1218330:CDS 40.0%
ACTCCGTGAAGAAGATTTGT+TGG - chr8_1:80968460-80968479 None:intergenic 40.0%
TCGCATATTCATGTTGCCAA+GGG - chr8_1:80968539-80968558 None:intergenic 40.0%
TGTGCCATCTGCATCAATAA+GGG - chr8_1:80968589-80968608 None:intergenic 40.0%
TTGTGCCATCTGCATCAATA+AGG - chr8_1:80968590-80968609 None:intergenic 40.0%
TGGAATTTCTGACGGTCTTA+TGG + chr8_1:80968699-80968718 Msa1218330:CDS 40.0%
! GGAATTTCTGACGGTCTTAT+GGG + chr8_1:80968700-80968719 Msa1218330:CDS 40.0%
! GAATTTCTGACGGTCTTATG+GGG + chr8_1:80968701-80968720 Msa1218330:CDS 40.0%
TGTGGAACAGGATTAAACGA+AGG - chr8_1:80968757-80968776 None:intergenic 40.0%
TTCAAAAACGAAGAGCTCTG+TGG - chr8_1:80968775-80968794 None:intergenic 40.0%
TAAAGGATTTGCATGCGATG+AGG - chr8_1:80969016-80969035 None:intergenic 40.0%
TCGCATGCAAATCCTTTACA+TGG + chr8_1:80969018-80969037 Msa1218330:CDS 40.0%
ACATCGATGTTGCCATGTAA+AGG - chr8_1:80969033-80969052 None:intergenic 40.0%
GGAAAATCTCCTTTCTCTCT+TGG + chr8_1:80969129-80969148 Msa1218330:CDS 40.0%
CAAGGTAATCTCCAAAATGG+TGG + chr8_1:80969165-80969184 Msa1218330:CDS 40.0%
!! AATGTTGACTGCCACCATTT+TGG - chr8_1:80969179-80969198 None:intergenic 40.0%
ATCAGGGAAGAGGTTAGTAT+GGG - chr8_1:80969265-80969284 None:intergenic 40.0%
TATCAGGGAAGAGGTTAGTA+TGG - chr8_1:80969266-80969285 None:intergenic 40.0%
ACCTCTTCCCTGATAATTTC+GGG + chr8_1:80969271-80969290 Msa1218330:CDS 40.0%
GTGACAGCAACTATTTACAC+CGG - chr8_1:80969536-80969555 None:intergenic 40.0%
CTGGGAGTAGTGTACTATAA+TGG + chr8_1:80969651-80969670 Msa1218330:three_prime_UTR 40.0%
TTGACCGCATAAAATGCACA+AGG + chr8_1:80969721-80969740 Msa1218330:three_prime_UTR 40.0%
! CATGCCTTGTGCATTTTATG+CGG - chr8_1:80969728-80969747 None:intergenic 40.0%
! TGTTCTTGAAGAGGTATGCT+TGG + chr8_1:80969806-80969825 Msa1218330:three_prime_UTR 40.0%
! GTTCTTGAAGAGGTATGCTT+GGG + chr8_1:80969807-80969826 Msa1218330:three_prime_UTR 40.0%
ATAAATCTGCAAACTCGCGT+AGG + chr8_1:80969860-80969879 Msa1218330:three_prime_UTR 40.0%
GACCGAAGAACATAAACATC+CGG - chr8_1:80970026-80970045 Msa1218340:intron 40.0%
AAACTGATCGGAACCTTCAC+CGG - chr8_1:80966076-80966095 None:intergenic 45.0%
TGAAGGTTCCGATCAGTTTC+CGG + chr8_1:80966077-80966096 Msa1218330:CDS 45.0%
TGATGTGCATATGCCAGACA+TGG + chr8_1:80966768-80966787 Msa1218330:CDS 45.0%
GAAGAACATATGGCAGCATG+TGG + chr8_1:80967041-80967060 Msa1218330:CDS 45.0%
ACATATGGCAGCATGTGGTT+CGG + chr8_1:80967046-80967065 Msa1218330:CDS 45.0%
GGAGAAACTCGAGAAAGAGA+AGG + chr8_1:80967184-80967203 Msa1218330:CDS 45.0%
AGAAGGGATGATGAAGAGGA+AGG + chr8_1:80967201-80967220 Msa1218330:CDS 45.0%
CGTCAACACTAAAGAAGCCT+CGG + chr8_1:80967241-80967260 Msa1218330:CDS 45.0%
GTCAACACTAAAGAAGCCTC+GGG + chr8_1:80967242-80967261 Msa1218330:CDS 45.0%
! TAAAGAAGCCTCGGGTTGTT+TGG + chr8_1:80967250-80967269 Msa1218330:CDS 45.0%
! ACATTTTCTCTAGTGAGCCC+AGG - chr8_1:80967989-80968008 None:intergenic 45.0%
!! ACTTGGGTCCTTTCTGAAGT+AGG - chr8_1:80968046-80968065 None:intergenic 45.0%
TTCTTGTGGTCATCTAACGG+AGG + chr8_1:80968087-80968106 Msa1218330:intron 45.0%
TTGTATCTTCGAAGGCTGAG+TGG + chr8_1:80968154-80968173 Msa1218330:CDS 45.0%
TTCATTTCTCAGCCCACAAG+AGG + chr8_1:80968198-80968217 Msa1218330:CDS 45.0%
TGCCAAATGATGCCTCTTGT+GGG - chr8_1:80968213-80968232 None:intergenic 45.0%
GGCACGATTTCGTCAATGAA+CGG + chr8_1:80968229-80968248 Msa1218330:CDS 45.0%
GGTAGGTCAACTGTGAAATC+AGG + chr8_1:80968328-80968347 Msa1218330:CDS 45.0%
! CTTTGATCCATGAGAGGCAT+TGG - chr8_1:80968358-80968377 None:intergenic 45.0%
CAATGCCTCTCATGGATCAA+AGG + chr8_1:80968356-80968375 Msa1218330:CDS 45.0%
AGGTTCCTTTGATCCATGAG+AGG - chr8_1:80968364-80968383 None:intergenic 45.0%
CCTTCTCCAAATCTCAACCT+TGG - chr8_1:80968403-80968422 None:intergenic 45.0%
CCAAGGTTGAGATTTGGAGA+AGG + chr8_1:80968400-80968419 Msa1218330:CDS 45.0%
TCACGGAGTTCCTACTAACA+TGG + chr8_1:80968471-80968490 Msa1218330:CDS 45.0%
! TGCTTTGGCTCCATGTTAGT+AGG - chr8_1:80968484-80968503 None:intergenic 45.0%
TGCAAATTGGCGAGTTGCTT+TGG - chr8_1:80968499-80968518 None:intergenic 45.0%
CTCGCATATTCATGTTGCCA+AGG - chr8_1:80968540-80968559 None:intergenic 45.0%
ATTTCCCTGTGTAGCAGAAG+CGG - chr8_1:80968566-80968585 None:intergenic 45.0%
! TAGCATTGGACCTCTAGGTT+GGG - chr8_1:80968614-80968633 None:intergenic 45.0%
! TTAGCATTGGACCTCTAGGT+TGG - chr8_1:80968615-80968634 None:intergenic 45.0%
! TCACTTAGCATTGGACCTCT+AGG - chr8_1:80968619-80968638 None:intergenic 45.0%
TCCAAGATTACCGAACCTCT+TGG + chr8_1:80968657-80968676 Msa1218330:CDS 45.0%
CCAAGATTACCGAACCTCTT+GGG + chr8_1:80968658-80968677 Msa1218330:CDS 45.0%
CAAGATTACCGAACCTCTTG+GGG + chr8_1:80968659-80968678 Msa1218330:CDS 45.0%
! TTCGGCTTGAAATGAGCCTT+TGG - chr8_1:80968878-80968897 None:intergenic 45.0%
TCGGGAATTAAAGGATCAGC+TGG + chr8_1:80968904-80968923 Msa1218330:CDS 45.0%
AACTGAACCAGCAGAAATCC+CGG + chr8_1:80968953-80968972 Msa1218330:CDS 45.0%
!! AGAAGCATCTCTGCTATGTC+CGG - chr8_1:80969103-80969122 None:intergenic 45.0%
AGCAGAGATGCTTCTTTGCT+TGG + chr8_1:80969108-80969127 Msa1218330:CDS 45.0%
TCTCCTTTCTCTCTTGGAGA+AGG + chr8_1:80969135-80969154 Msa1218330:CDS 45.0%
AAGCCTTCTCCAAGAGAGAA+AGG - chr8_1:80969141-80969160 None:intergenic 45.0%
TTTCTCTCTTGGAGAAGGCT+TGG + chr8_1:80969140-80969159 Msa1218330:CDS 45.0%
CATCCTGCCCGAAATTATCA+GGG - chr8_1:80969281-80969300 None:intergenic 45.0%
TCATCCTGCCCGAAATTATC+AGG - chr8_1:80969282-80969301 None:intergenic 45.0%
!! CATGAGTGCACTTCTGAAAC+AGG + chr8_1:80969305-80969324 Msa1218330:CDS 45.0%
TTGTGTTTCTTGCAGCAGGA+AGG + chr8_1:80969414-80969433 Msa1218330:intron 45.0%
! TGACTTTGACGGGTATTCTC+TGG + chr8_1:80969458-80969477 Msa1218330:CDS 45.0%
! TGAAGAGGTATGCTTGGGTT+AGG + chr8_1:80969812-80969831 Msa1218330:three_prime_UTR 45.0%
! GAAGAGGTATGCTTGGGTTA+GGG + chr8_1:80969813-80969832 Msa1218330:three_prime_UTR 45.0%
TAAACCCGCCGGAAACTGAT+CGG - chr8_1:80966088-80966107 None:intergenic 50.0%
GGGTTTACGAGTTCTCGTTG+TGG + chr8_1:80966101-80966120 Msa1218330:CDS 50.0%
GTGCATATGCCAGACATGGA+TGG + chr8_1:80966772-80966791 Msa1218330:CDS 50.0%
GTAGTGATGTCTGCCGATGA+TGG + chr8_1:80966943-80966962 Msa1218330:intron 50.0%
GTGGAAAGATACGGAGCAGT+CGG + chr8_1:80967083-80967102 Msa1218330:CDS 50.0%
TGGAAAGATACGGAGCAGTC+GGG + chr8_1:80967084-80967103 Msa1218330:CDS 50.0%
CGAGCTCCATCAACAGTTTG+TGG + chr8_1:80967278-80967297 Msa1218330:CDS 50.0%
CAGCAGCCACAAACTGTTGA+TGG - chr8_1:80967287-80967306 None:intergenic 50.0%
TCAACAGTTTGTGGCTGCTG+TGG + chr8_1:80967287-80967306 Msa1218330:CDS 50.0%
GACAGTATGTATCCTCACCC+AGG + chr8_1:80967324-80967343 Msa1218330:intron 50.0%
!! CTTTTGAAGAGTCCTGGGTG+AGG - chr8_1:80967339-80967358 None:intergenic 50.0%
AAATGTTGCCAGCCACTTGC+AGG + chr8_1:80968003-80968022 Msa1218330:CDS 50.0%
GTATGATACCTGCAAGTGGC+TGG - chr8_1:80968014-80968033 None:intergenic 50.0%
!! AGCCCACAAGAGGCATCATT+TGG + chr8_1:80968208-80968227 Msa1218330:CDS 50.0%
GTGCCAAATGATGCCTCTTG+TGG - chr8_1:80968214-80968233 None:intergenic 50.0%
CAGCTGCTGCAAGAGTTTGA+AGG - chr8_1:80968261-80968280 None:intergenic 50.0%
CTTCAAACTCTTGCAGCAGC+TGG + chr8_1:80968259-80968278 Msa1218330:CDS 50.0%
! AAGTCCTGCTGCTTGAAGAG+TGG - chr8_1:80968308-80968327 None:intergenic 50.0%
ACTCTTCAAGCAGCAGGACT+TGG + chr8_1:80968307-80968326 Msa1218330:CDS 50.0%
! TTCAAGCAGCAGGACTTGGT+AGG + chr8_1:80968311-80968330 Msa1218330:CDS 50.0%
AGGCTTACCAATGCCTCTCA+TGG + chr8_1:80968348-80968367 Msa1218330:CDS 50.0%
TGCTGCAGACTGGTGCAAAT+TGG - chr8_1:80968512-80968531 None:intergenic 50.0%
TTTCCCTGTGTAGCAGAAGC+GGG - chr8_1:80968565-80968584 None:intergenic 50.0%
ATGGCACAATCCCAACCTAG+AGG + chr8_1:80968601-80968620 Msa1218330:CDS 50.0%
! CCCAAGAGGTTCGGTAATCT+TGG - chr8_1:80968661-80968680 None:intergenic 50.0%
GGGCAGTCTACTGTGTCAAA+TGG + chr8_1:80968679-80968698 Msa1218330:CDS 50.0%
AACGAAGAGCTCTGTGGAAC+AGG - chr8_1:80968769-80968788 None:intergenic 50.0%
! TACCTGGAGTGCTTCCAAGA+GGG - chr8_1:80968840-80968859 None:intergenic 50.0%
! ATACCTGGAGTGCTTCCAAG+AGG - chr8_1:80968841-80968860 None:intergenic 50.0%
ACTGAACCAGCAGAAATCCC+GGG + chr8_1:80968954-80968973 Msa1218330:CDS 50.0%
GATTGGGGGATGACAAACCA+AGG + chr8_1:80968976-80968995 Msa1218330:CDS 50.0%
CAACATCGATGTCTCTCCGT+CGG + chr8_1:80969041-80969060 Msa1218330:CDS 50.0%
!!! TCCGTCGGTTTTAGTCCATC+AGG + chr8_1:80969056-80969075 Msa1218330:CDS 50.0%
!! CCCTGATGGACTAAAACCGA+CGG - chr8_1:80969060-80969079 None:intergenic 50.0%
!!! CCGTCGGTTTTAGTCCATCA+GGG + chr8_1:80969057-80969076 Msa1218330:CDS 50.0%
GAGCAGAAGAAAAGCCCTGA+TGG - chr8_1:80969074-80969093 None:intergenic 50.0%
CTTGGAGAAGGCTTGGAACA+AGG + chr8_1:80969147-80969166 Msa1218330:CDS 50.0%
GCCCGAAATTATCAGGGAAG+AGG - chr8_1:80969275-80969294 None:intergenic 50.0%
CTTCCCTGATAATTTCGGGC+AGG + chr8_1:80969275-80969294 Msa1218330:CDS 50.0%
! TTCTTGCAGCAGGAAGGCAT+TGG + chr8_1:80969420-80969439 Msa1218330:intron 50.0%
AGGGCAGAATTGCAGAAGCA+AGG + chr8_1:80969832-80969851 Msa1218330:three_prime_UTR 50.0%
AGGTTCCGATCAGTTTCCGG+CGG + chr8_1:80966080-80966099 Msa1218330:CDS 55.0%
ACGAGAACTCGTAAACCCGC+CGG - chr8_1:80966099-80966118 None:intergenic 55.0%
TCGACAGACCAAACAACCCG+AGG - chr8_1:80967261-80967280 None:intergenic 55.0%
GTGGCTGCTGTGGATCAACT+AGG + chr8_1:80967297-80967316 Msa1218330:CDS 55.0%
GAGTGGCTAGACTTTGCGCT+GGG - chr8_1:80968291-80968310 None:intergenic 55.0%
AGAGTGGCTAGACTTTGCGC+TGG - chr8_1:80968292-80968311 None:intergenic 55.0%
CTAGCCACTCTTCAAGCAGC+AGG + chr8_1:80968301-80968320 Msa1218330:CDS 55.0%
TTCCCTGTGTAGCAGAAGCG+GGG - chr8_1:80968564-80968583 None:intergenic 55.0%
GTAGACTGCCCCAAGAGGTT+CGG - chr8_1:80968670-80968689 None:intergenic 55.0%
ACACAGTAGACTGCCCCAAG+AGG - chr8_1:80968675-80968694 None:intergenic 55.0%
!! TTCCCTCTTGGAAGCACTCC+AGG + chr8_1:80968835-80968854 Msa1218330:CDS 55.0%
ACCAGCAGAAATCCCGGGAT+TGG + chr8_1:80968959-80968978 Msa1218330:CDS 55.0%
CCAGCAGAAATCCCGGGATT+GGG + chr8_1:80968960-80968979 Msa1218330:CDS 55.0%
CAGCAGAAATCCCGGGATTG+GGG + chr8_1:80968961-80968980 Msa1218330:CDS 55.0%
AGCAGAAATCCCGGGATTGG+GGG + chr8_1:80968962-80968981 Msa1218330:CDS 55.0%
GTTTGTCATCCCCCAATCCC+GGG - chr8_1:80968974-80968993 None:intergenic 55.0%
GGTTTGTCATCCCCCAATCC+CGG - chr8_1:80968975-80968994 None:intergenic 55.0%
TTAGTATGGGAGCTCGCGTC+AGG - chr8_1:80969252-80969271 None:intergenic 55.0%
GGCGAGAGTCTCTTCTAGAC+AGG - chr8_1:80969492-80969511 None:intergenic 55.0%
GGTTCCGATCAGTTTCCGGC+GGG + chr8_1:80966081-80966100 Msa1218330:CDS 60.0%
!! CAGTCGGGTAGTGCTGACGA+GGG + chr8_1:80967099-80967118 Msa1218330:CDS 60.0%
CTAGACTTTGCGCTGGGAGC+TGG - chr8_1:80968285-80968304 None:intergenic 60.0%
CAAGGGACTGTGCTGCAGAC+TGG - chr8_1:80968522-80968541 None:intergenic 60.0%
CAGTCTGCAGCACAGTCCCT+TGG + chr8_1:80968520-80968539 Msa1218330:CDS 60.0%
AGTCCCCGCTTCTGCTACAC+AGG + chr8_1:80968558-80968577 Msa1218330:CDS 60.0%
GTCCCCGCTTCTGCTACACA+GGG + chr8_1:80968559-80968578 Msa1218330:CDS 60.0%
CCCAATCCCGGGATTTCTGC+TGG - chr8_1:80968963-80968982 None:intergenic 60.0%
!! GCAGTCGGGTAGTGCTGACG+AGG + chr8_1:80967098-80967117 Msa1218330:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 80965825 80970225 80965825 ID=Msa1218330;Name=Msa1218330
chr8_1 mRNA 80965825 80970225 80965825 ID=Msa1218330-mRNA-1;Parent=Msa1218330;Name=Msa1218330-mRNA-1;_AED=0.06;_eAED=0.06;_QI=178|1|1|1|1|1|6|728|680
chr8_1 exon 80965825 80966183 80965825 ID=Msa1218330-mRNA-1:exon:28553;Parent=Msa1218330-mRNA-1
chr8_1 exon 80966692 80966844 80966692 ID=Msa1218330-mRNA-1:exon:28554;Parent=Msa1218330-mRNA-1
chr8_1 exon 80966947 80967327 80966947 ID=Msa1218330-mRNA-1:exon:28555;Parent=Msa1218330-mRNA-1
chr8_1 exon 80967948 80968024 80967948 ID=Msa1218330-mRNA-1:exon:28556;Parent=Msa1218330-mRNA-1
chr8_1 exon 80968145 80969326 80968145 ID=Msa1218330-mRNA-1:exon:28557;Parent=Msa1218330-mRNA-1
chr8_1 exon 80969429 80970225 80969429 ID=Msa1218330-mRNA-1:exon:28558;Parent=Msa1218330-mRNA-1
chr8_1 five_prime_UTR 80965825 80966002 80965825 ID=Msa1218330-mRNA-1:five_prime_utr;Parent=Msa1218330-mRNA-1
chr8_1 CDS 80966003 80966183 80966003 ID=Msa1218330-mRNA-1:cds;Parent=Msa1218330-mRNA-1
chr8_1 CDS 80966692 80966844 80966692 ID=Msa1218330-mRNA-1:cds;Parent=Msa1218330-mRNA-1
chr8_1 CDS 80966947 80967327 80966947 ID=Msa1218330-mRNA-1:cds;Parent=Msa1218330-mRNA-1
chr8_1 CDS 80967948 80968024 80967948 ID=Msa1218330-mRNA-1:cds;Parent=Msa1218330-mRNA-1
chr8_1 CDS 80968145 80969326 80968145 ID=Msa1218330-mRNA-1:cds;Parent=Msa1218330-mRNA-1
chr8_1 CDS 80969429 80969497 80969429 ID=Msa1218330-mRNA-1:cds;Parent=Msa1218330-mRNA-1
chr8_1 three_prime_UTR 80969498 80970225 80969498 ID=Msa1218330-mRNA-1:three_prime_utr;Parent=Msa1218330-mRNA-1
Gene Sequence

>Msa1218330

ATGATGAATCTAAGCAACAACGGAAAAGGATCAATATCAACTGTTACTTCAACTGCTACTACTATGAAATCCGGTGAAGGTTCCGATCAGTTTCCGGCGGGTTTACGAGTTCTCGTTGTGGATGATGATCCCACGTGTCTTATGATTCTTGAGAAGATGTTGCGCACATGTCTTTATGAAGTTACGAAATGCAATCGAGCTGAGACTGCGCTTTCGCTACTCAGAGAGAACAAGAATGGATTTGATATTGTTATTAGTGATGTGCATATGCCAGACATGGATGGATTTAAACTCTTAGAACATATTGGATTGGAAATGGACCTTCCAGTTATTATGATGTCTGCCGATGATGGTAAAAGTGTTGTTATGAAGGGTGTAACACATGGTGCTTGTGATTACTTGATTAAACCTGTTCGTATTGAGGCTTTGAAGAACATATGGCAGCATGTGGTTCGGAAGAAAAAGAACGAGTGGAAAGATACGGAGCAGTCGGGTAGTGCTGACGAGGGAGATCGACATCCAAAAGCATCTGATGATGCTGATTATTCGTCTTCTGCTAATGAAGGAAATTGGAGAAACTCGAGAAAGAGAAGGGATGATGAAGAGGAAGGTGACGATAGAGATGACTCGTCAACACTAAAGAAGCCTCGGGTTGTTTGGTCTGTCGAGCTCCATCAACAGTTTGTGGCTGCTGTGGATCAACTAGGAATTGACAAGGCTGTTCCCAAAAAAATTCTGGAATTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCACTTGCAGAAATATCGATTGTATCTTCGAAGGCTGAGTGGAGTTTCTCAGCACCAGAATAATTCATTTCTCAGCCCACAAGAGGCATCATTTGGCACGATTTCGTCAATGAACGGACTTGACCTTCAAACTCTTGCAGCAGCTGGCCAGCTCCCAGCGCAAAGTCTAGCCACTCTTCAAGCAGCAGGACTTGGTAGGTCAACTGTGAAATCAGGCTTACCAATGCCTCTCATGGATCAAAGGAACCTTTTCAGTTTTGAAAACCCAAGGTTGAGATTTGGAGAAGGGCAACAACAACTTTTGAATGGTAGTAATAATAAACCAACAAATCTTCTTCACGGAGTTCCTACTAACATGGAGCCAAAGCAACTCGCCAATTTGCACCAGTCTGCAGCACAGTCCCTTGGCAACATGAATATGCGAGTCCCCGCTTCTGCTACACAGGGAAATCCCTTATTGATGCAGATGGCACAATCCCAACCTAGAGGTCCAATGCTAAGTGAAAATACTGGTTCTCATGTTCCAAGATTACCGAACCTCTTGGGGCAGTCTACTGTGTCAAATGGAATTTCTGACGGTCTTATGGGGAGAAATAACATGGCTAGTAGCAGTAGAGTGCCTTCGTTTAATCCTGTTCCACAGAGCTCTTCGTTTTTGAATTTTCCCATGAATCAAAGCACTGAAATGTCTGTTAGTAATTTCCCTCTTGGAAGCACTCCAGGTATATCTAGTATCACAACCAAAGGCTCATTTCAAGCCGAAGTTAATTCGGGAATTAAAGGATCAGCTGGATTTCCAAGTTATGATATTTTTAACGAACTGAACCAGCAGAAATCCCGGGATTGGGGGATGACAAACCAAGGTCTAACATATGATTCCTCATCGCATGCAAATCCTTTACATGGCAACATCGATGTCTCTCCGTCGGTTTTAGTCCATCAGGGCTTTTCTTCTGCTCAACAAACCGGACATAGCAGAGATGCTTCTTTGCTTGGAAAATCTCCTTTCTCTCTTGGAGAAGGCTTGGAACAAGGTAATCTCCAAAATGGTGGCAGTCAACATTTCAATCCTCTTTATGTTGAAAATTCAACAAGGGTTAAGGCTGAAAGAGTTCCTGACGCGAGCTCCCATACTAACCTCTTCCCTGATAATTTCGGGCAGGATGATCTCATGAGTGCACTTCTGAAACAGCAGGAAGGCATTGGACGCGAGAATGAGTTTGACTTTGACGGGTATTCTCTGGACAACATTCCTGTCTAG
Protein sequence

>Msa1218330

MMNLSNNGKGSISTVTSTATTMKSGEGSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEWKDTEQSGSADEGDRHPKASDDADYSSSANEGNWRNSRKRRDDEEEGDDRDDSSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNSFLSPQEASFGTISSMNGLDLQTLAAAGQLPAQSLATLQAAGLGRSTVKSGLPMPLMDQRNLFSFENPRLRFGEGQQQLLNGSNNKPTNLLHGVPTNMEPKQLANLHQSAAQSLGNMNMRVPASATQGNPLLMQMAQSQPRGPMLSENTGSHVPRLPNLLGQSTVSNGISDGLMGRNNMASSSRVPSFNPVPQSSSFLNFPMNQSTEMSVSNFPLGSTPGISSITTKGSFQAEVNSGIKGSAGFPSYDIFNELNQQKSRDWGMTNQGLTYDSSSHANPLHGNIDVSPSVLVHQGFSSAQQTGHSRDASLLGKSPFSLGEGLEQGNLQNGGSQHFNPLYVENSTRVKAERVPDASSHTNLFPDNFGQDDLMSALLKQQEGIGRENEFDFDGYSLDNIPV*