AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1218290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218290 MtrunA17_Chr4g0067981 98.532 681 8 2 1 680 1 680 0.0 1373
Msa1218290 MtrunA17_Chr2g0294911 62.445 679 170 13 6 680 4 601 0.0 766
Msa1218290 MtrunA17_Chr1g0161431 57.012 328 131 5 24 345 4 327 2.05e-117 365
Msa1218290 MtrunA17_Chr3g0137101 59.542 262 98 2 26 280 3 263 3.60e-101 323
Msa1218290 MtrunA17_Chr3g0123131 60.784 255 98 1 31 283 13 267 1.28e-97 311
Msa1218290 MtrunA17_Chr8g0376881 59.216 255 104 0 29 283 23 277 4.63e-95 303
Msa1218290 MtrunA17_Chr1g0149841 57.414 263 98 3 28 282 2 258 1.71e-94 301
Msa1218290 MtrunA17_Chr2g0304841 45.767 378 173 9 29 387 16 380 6.01e-89 292
Msa1218290 MtrunA17_Chr7g0275891 50.000 294 116 6 28 300 2 285 1.45e-83 267
Msa1218290 MtrunA17_Chr4g0074411 47.522 343 150 9 31 356 18 347 4.99e-83 274
Msa1218290 MtrunA17_Chr1g0149851 53.091 275 98 4 28 278 2 269 8.26e-82 269
Msa1218290 MtrunA17_Chr4g0074401 45.251 358 158 10 29 364 15 356 1.36e-80 267
Msa1218290 MtrunA17_Chr7g0275401 48.097 289 137 4 28 308 2 285 1.26e-78 252
Msa1218290 MtrunA17_Chr3g0134461 49.583 240 70 2 26 264 3 192 9.15e-61 201
Msa1218290 MtrunA17_Chr1g0149831 53.659 205 70 4 90 282 1 192 8.06e-59 197
Msa1218290 MtrunA17_Chr4g0074421 56.477 193 73 4 81 269 2 187 2.51e-58 195
Msa1218290 MtrunA17_Chr4g0009851 42.324 241 113 4 31 271 11 225 2.72e-56 194
Msa1218290 MtrunA17_Chr4g0009901 42.562 242 113 2 31 272 10 225 9.00e-56 191
Msa1218290 MtrunA17_Chr3g0134481 61.069 131 51 0 28 158 5 135 1.11e-48 169
Msa1218290 MtrunA17_Chr3g0134481 62.264 53 20 0 214 266 131 183 3.30e-16 77.4
Msa1218290 MtrunA17_Chr4g0009981 41.327 196 90 1 76 271 2 172 8.54e-45 160
Msa1218290 MtrunA17_Chr6g0471041 38.934 244 119 6 30 271 13 228 8.56e-45 165
Msa1218290 MtrunA17_Chr8g0391911 37.109 256 137 8 31 274 9 252 1.80e-36 137
Msa1218290 MtrunA17_Chr8g0350761 31.481 270 162 6 33 281 19 286 4.97e-31 127
Msa1218290 MtrunA17_Chr6g0473731 36.313 179 89 2 111 283 10 169 2.54e-29 121
Msa1218290 MtrunA17_Chr8g0383961 43.750 128 72 0 30 157 13 140 2.08e-28 114
Msa1218290 MtrunA17_Chr4g0011071 32.919 161 83 1 81 241 39 174 1.14e-25 104
Msa1218290 MtrunA17_Chr4g0031961 54.082 98 37 2 188 277 96 193 3.17e-24 103
Msa1218290 MtrunA17_Chr3g0127941 34.239 184 113 4 35 212 56 237 2.54e-23 105
Msa1218290 MtrunA17_Chr7g0255711 63.768 69 25 0 208 276 84 152 3.79e-23 100
Msa1218290 MtrunA17_Chr6g0456631 36.220 127 78 2 29 153 7 132 9.51e-23 95.9
Msa1218290 MtrunA17_Chr4g0009991 40.141 142 59 2 123 264 1 116 2.09e-22 93.2
Msa1218290 MtrunA17_Chr7g0276361 38.686 137 73 3 25 153 2 135 2.33e-21 98.6
Msa1218290 MtrunA17_Chr7g0223971 33.333 195 83 4 113 274 1 181 2.55e-21 98.2
Msa1218290 MtrunA17_Chr4g0030271 38.211 123 71 2 35 153 89 210 3.21e-21 99.0
Msa1218290 MtrunA17_Chr1g0181811 38.525 122 72 1 35 153 85 206 8.69e-21 97.4
Msa1218290 MtrunA17_Chr8g0345901 39.344 122 67 3 37 153 38 157 2.09e-19 92.8
Msa1218290 MtrunA17_Chr3g0091641 34.677 124 78 1 35 155 24 147 4.74e-19 91.3
Msa1218290 MtrunA17_Chr5g0400241 57.971 69 29 0 205 273 301 369 7.81e-19 90.5
Msa1218290 MtrunA17_Chr5g0400241 36.364 132 80 2 26 156 9 137 1.24e-14 77.4
Msa1218290 MtrunA17_Chr4g0061021 35.036 137 83 3 23 155 22 156 1.13e-18 90.1
Msa1218290 MtrunA17_Chr4g0054981 50.000 78 37 1 214 291 309 384 1.14e-17 87.0
Msa1218290 MtrunA17_Chr4g0054981 36.220 127 77 2 31 156 14 137 1.24e-13 73.9
Msa1218290 MtrunA17_Chr5g0423031 45.679 81 43 1 31 111 10 89 2.27e-17 80.5
Msa1218290 MtrunA17_Chr4g0010001 44.444 81 44 1 31 111 10 89 3.18e-17 77.4
Msa1218290 MtrunA17_Chr4g0040481 58.333 60 25 0 214 273 157 216 3.64e-16 81.3
Msa1218290 MtrunA17_Chr2g0324891 45.977 87 45 1 214 300 160 244 6.87e-16 80.5
Msa1218290 MtrunA17_Chr1g0198601 50.000 82 40 1 203 283 199 280 7.07e-16 80.1
Msa1218290 MtrunA17_Chr6g0469321 67.308 52 17 0 231 282 70 121 1.81e-14 72.0
Msa1218290 MtrunA17_Chr5g0417521 57.627 59 24 1 211 268 11 69 1.98e-14 75.5
Msa1218290 MtrunA17_Chr5g0422621 40.541 111 53 4 202 300 186 295 3.52e-14 74.7
Msa1218290 MtrunA17_Chr7g0274471 46.739 92 40 2 215 305 218 301 3.69e-14 75.5
Msa1218290 MtrunA17_Chr6g0461641 55.932 59 25 1 211 268 38 96 1.06e-13 73.6
Msa1218290 MtrunA17_Chr2g0321461 55.932 59 25 1 211 268 41 99 2.11e-13 72.4
Msa1218290 MtrunA17_Chr4g0042451 54.237 59 26 1 211 268 13 71 5.00e-13 70.9
Msa1218290 MtrunA17_Chr2g0310011 57.627 59 24 1 211 268 31 89 1.26e-12 69.7
Msa1218290 MtrunA17_Chr4g0045361 53.731 67 30 1 212 277 271 337 1.35e-12 70.1
Msa1218290 MtrunA17_Chr8g0356501 50.649 77 37 1 193 268 15 91 1.44e-12 69.7
Msa1218290 MtrunA17_Chr7g0261911 44.792 96 44 3 211 305 258 345 1.64e-12 70.5
Msa1218290 MtrunA17_Chr5g0402631 55.738 61 26 1 214 273 213 273 1.96e-12 69.3
Msa1218290 MtrunA17_Chr4g0062921 52.941 68 31 1 212 278 232 299 2.13e-12 69.7
Msa1218290 MtrunA17_Chr1g0190301 41.237 97 48 2 210 305 170 258 2.26e-12 69.3
Msa1218290 MtrunA17_Chr1g0197171 60.000 55 21 1 215 268 44 98 3.60e-12 67.8
Msa1218290 MtrunA17_Chr7g0254981 56.364 55 23 1 215 268 50 104 1.39e-11 65.9
Msa1218290 MtrunA17_Chr5g0409731 56.364 55 23 1 215 268 25 79 1.42e-11 65.9
Msa1218290 MtrunA17_Chr2g0290991 58.182 55 22 1 215 268 39 93 3.93e-11 64.7
Msa1218290 MtrunA17_Chr2g0291021 58.182 55 22 1 215 268 49 103 7.53e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218290 AT3G16857.2 53.868 698 238 28 29 680 31 690 0.0 617
Msa1218290 AT3G16857.1 53.481 675 232 26 29 658 31 668 0.0 592
Msa1218290 AT3G16857.3 51.750 657 233 28 70 680 2 620 0.0 534
Msa1218290 AT2G25180.1 47.255 419 179 12 20 414 2 402 3.63e-99 317
Msa1218290 AT2G01760.1 52.492 301 123 3 29 320 5 294 1.67e-93 295
Msa1218290 AT4G31920.1 55.556 279 96 4 29 301 11 267 2.19e-89 290
Msa1218290 AT1G67710.1 63.052 249 81 5 32 273 8 252 3.75e-89 288
Msa1218290 AT2G01760.2 48.024 329 123 4 29 320 5 322 1.24e-87 280
Msa1218290 AT5G58080.1 51.034 290 135 4 29 317 12 295 5.47e-82 272
Msa1218290 AT2G01760.3 49.583 240 101 3 90 320 1 229 5.62e-61 207
Msa1218290 AT1G67710.2 60.209 191 65 5 90 273 1 187 5.94e-58 203
Msa1218290 AT5G49240.1 41.825 263 132 4 28 279 35 287 1.56e-55 191
Msa1218290 AT1G49190.1 35.048 311 161 9 11 302 15 303 3.45e-47 172
Msa1218290 AT3G62670.1 36.859 312 164 10 36 337 42 330 6.41e-46 169
Msa1218290 AT1G67710.3 55.556 171 65 5 110 273 12 178 1.92e-42 160
Msa1218290 AT5G07210.2 34.701 268 145 6 35 274 16 281 2.36e-39 154
Msa1218290 AT5G07210.1 33.696 276 145 7 35 274 16 289 9.26e-37 146
Msa1218290 AT2G27070.1 33.333 270 147 7 35 273 16 283 5.54e-34 137
Msa1218290 AT1G49190.2 42.361 144 78 1 11 154 15 153 6.31e-30 125
Msa1218290 AT3G46640.2 60.759 79 28 1 202 277 128 206 4.11e-24 104
Msa1218290 AT3G46640.1 60.759 79 28 1 202 277 128 206 4.11e-24 104
Msa1218290 AT3G46640.3 60.759 79 28 1 202 277 128 206 6.76e-24 103
Msa1218290 AT5G59570.2 59.036 83 31 2 202 281 125 207 1.80e-23 101
Msa1218290 AT5G59570.1 59.036 83 31 2 202 281 125 207 1.80e-23 101
Msa1218290 AT2G46790.1 39.837 123 69 2 35 153 37 158 2.90e-23 103
Msa1218290 AT2G46790.3 39.837 123 69 2 35 153 37 158 3.15e-23 103
Msa1218290 AT2G40970.1 66.667 66 22 0 208 273 98 163 7.23e-23 99.0
Msa1218290 AT5G05090.1 62.667 75 26 1 201 273 65 139 8.44e-23 99.0
Msa1218290 AT3G10760.1 69.355 62 19 0 212 273 102 163 3.62e-22 99.0
Msa1218290 AT1G68210.1 26.937 271 165 5 35 274 13 281 1.75e-21 100
Msa1218290 AT5G60100.7 39.024 123 70 2 35 153 64 185 3.02e-21 97.4
Msa1218290 AT5G60100.6 39.024 123 70 2 35 153 64 185 3.02e-21 97.4
Msa1218290 AT5G60100.4 39.024 123 70 2 35 153 64 185 3.02e-21 97.4
Msa1218290 AT5G60100.5 39.024 123 70 2 35 153 64 185 4.03e-21 97.8
Msa1218290 AT5G60100.3 39.024 123 70 2 35 153 64 185 4.03e-21 97.8
Msa1218290 AT5G60100.1 39.024 123 70 2 35 153 64 185 4.03e-21 97.8
Msa1218290 AT5G60100.2 39.024 123 70 2 35 153 64 185 7.53e-21 97.1
Msa1218290 AT5G02810.1 39.344 122 71 1 35 153 78 199 1.66e-20 97.1
Msa1218290 AT5G24470.1 37.600 125 73 2 34 154 49 172 2.07e-20 95.9
Msa1218290 AT5G61380.1 35.556 135 82 2 26 155 8 142 1.81e-19 93.2
Msa1218290 AT5G44190.2 62.121 66 25 0 208 273 140 205 2.32e-19 90.9
Msa1218290 AT5G44190.1 62.121 66 25 0 208 273 140 205 2.39e-19 91.3
Msa1218290 AT2G20570.1 42.727 110 62 1 165 273 102 211 3.96e-17 84.7
Msa1218290 AT2G20570.2 48.936 94 46 1 182 273 134 227 2.64e-16 82.4
Msa1218290 AT4G18020.8 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218290 AT4G18020.8 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218290 AT4G18020.11 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218290 AT4G18020.11 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218290 AT4G18020.4 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218290 AT4G18020.4 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218290 AT4G18020.5 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218290 AT4G18020.5 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218290 AT4G18020.10 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218290 AT4G18020.10 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218290 AT4G18020.7 34.074 135 81 2 155 289 243 369 6.74e-15 78.2
Msa1218290 AT4G18020.7 36.765 136 77 3 29 157 12 145 3.99e-14 75.9
Msa1218290 AT4G18020.3 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218290 AT4G18020.3 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218290 AT4G18020.2 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218290 AT4G18020.2 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218290 AT4G18020.1 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218290 AT4G18020.1 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218290 AT4G18020.6 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218290 AT4G18020.6 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218290 AT4G18020.9 34.074 135 81 2 155 289 243 369 8.04e-15 78.2
Msa1218290 AT4G18020.9 36.765 136 77 3 29 157 12 145 5.36e-14 75.5
Msa1218290 AT3G04030.1 52.000 75 31 3 211 284 41 111 5.71e-14 74.7
Msa1218290 AT3G04030.3 52.000 75 31 3 211 284 41 111 6.10e-14 74.7
Msa1218290 AT5G29000.1 34.682 173 84 6 154 305 110 274 6.24e-14 74.3
Msa1218290 AT5G29000.3 34.682 173 84 6 154 305 110 274 6.24e-14 74.3
Msa1218290 AT5G29000.2 34.682 173 84 6 154 305 153 317 6.47e-14 74.7
Msa1218290 AT5G18240.2 57.627 59 24 1 211 268 41 99 2.45e-13 72.8
Msa1218290 AT5G18240.3 57.627 59 24 1 211 268 41 99 2.45e-13 72.8
Msa1218290 AT5G18240.5 57.627 59 24 1 211 268 41 99 2.65e-13 72.8
Msa1218290 AT5G18240.1 57.627 59 24 1 211 268 41 99 2.65e-13 72.8
Msa1218290 AT5G18240.4 57.627 59 24 1 211 268 41 99 2.65e-13 72.8
Msa1218290 AT5G29000.4 37.594 133 63 4 154 267 153 284 5.17e-13 70.9
Msa1218290 AT3G04030.2 48.649 74 34 2 211 284 41 110 9.12e-13 71.2
Msa1218290 AT1G79430.2 57.627 59 24 1 211 268 30 88 1.70e-12 70.1
Msa1218290 AT3G04450.4 42.424 99 47 3 210 305 193 284 1.99e-12 70.1
Msa1218290 AT3G04450.2 42.424 99 47 3 210 305 193 284 1.99e-12 70.1
Msa1218290 AT3G04450.1 42.424 99 47 3 210 305 233 324 2.04e-12 70.5
Msa1218290 AT1G69580.1 52.542 59 27 1 211 268 30 88 3.09e-12 68.9
Msa1218290 AT1G69580.2 52.542 59 27 1 211 268 30 88 3.14e-12 68.9
Msa1218290 AT1G25550.1 48.611 72 36 1 202 272 196 267 4.20e-12 68.6
Msa1218290 AT3G24120.2 58.182 55 22 1 215 268 41 95 4.51e-12 67.8
Msa1218290 AT3G24120.1 58.182 55 22 1 215 268 41 95 4.57e-12 67.8
Msa1218290 AT3G12730.1 52.174 69 26 2 207 268 9 77 4.90e-12 66.6
Msa1218290 AT5G45580.1 56.364 55 23 1 215 268 7 61 5.53e-12 67.0
Msa1218290 AT5G45580.2 56.364 55 23 1 215 268 23 77 6.98e-12 67.0
Msa1218290 AT2G03500.1 54.839 62 27 1 214 274 232 293 6.99e-12 68.6
Msa1218290 AT4G13640.2 58.182 55 22 1 215 268 37 91 1.08e-11 66.6
Msa1218290 AT4G13640.1 58.182 55 22 1 215 268 37 91 1.09e-11 66.6
Msa1218290 AT3G04450.3 54.237 59 26 1 210 267 233 291 1.31e-11 66.6
Msa1218290 AT2G01060.1 55.738 61 26 1 209 268 9 69 2.54e-11 65.5
Msa1218290 AT1G68670.1 46.914 81 40 2 200 277 198 278 4.31e-11 65.5

Find 204 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATATTCTTCAAACTTC+TGG 0.147805 8_1:+80922515 Msa1218290:three_prime_UTR
TGGAATTTCTGACGGTCTTA+TGG 0.190497 8_1:+80921582 Msa1218290:CDS
TCATCCTGCCCGAAATTATC+AGG 0.256695 8_1:-80922162 None:intergenic
TGAAGGTTCCGATCAGTTTC+CGG 0.268090 8_1:+80918960 Msa1218290:CDS
AACCTCTTCCCTGATAATTT+CGG 0.273856 8_1:+80922153 Msa1218290:CDS
TATCAGGGAAGAGGTTAGTA+TGG 0.283763 8_1:-80922146 None:intergenic
ACCTCTTCCCTGATAATTTC+GGG 0.288070 8_1:+80922154 Msa1218290:CDS
TCAGTACTTAACCTCTTTGT+AGG 0.293342 8_1:+80923067 Msa1218290:three_prime_UTR
TTTAAACTCTTAGAACATAT+TGG 0.300849 8_1:+80919679 Msa1218290:CDS
TTCTTTCTGATTGCAGTTAC+CGG 0.308965 8_1:+80922397 Msa1218290:three_prime_UTR
TTGTGCCATCTGCATCAATA+AGG 0.312582 8_1:-80921470 None:intergenic
CCAAAGTACTTACTAATAAC+TGG 0.319130 8_1:-80919718 None:intergenic
CATTTCAGTGCTTTGATTCA+TGG 0.319626 8_1:-80921683 None:intergenic
AGTGATCATGAGCATACTTT+AGG 0.319751 8_1:+80923038 Msa1218290:three_prime_UTR
TCAGCATCATCAGATGCTTT+TGG 0.321169 8_1:-80920015 None:intergenic
ATTTCAAGCCGAAGTTAATT+CGG 0.322921 8_1:+80921768 Msa1218290:CDS
CTTCTGCTAATGAAGGAAAT+TGG 0.323941 8_1:+80920046 Msa1218290:CDS
GGAAAATCTCCTTTCTCTCT+TGG 0.333648 8_1:+80922012 Msa1218290:CDS
TTCCGGATGTTTATGTTCTT+CGG 0.335747 8_1:+80922904 Msa1218290:three_prime_UTR
CTTCTCCAAATCTCAACCTT+GGG 0.339068 8_1:-80921282 None:intergenic
TGAAGAGGTATGCTTGGGTT+AGG 0.342605 8_1:+80922695 Msa1218290:three_prime_UTR
TGCAAATTGGCGAGTTGCTT+TGG 0.342865 8_1:-80921379 None:intergenic
CTGGAATTGATGAATGTTCC+TGG 0.347527 8_1:+80920851 Msa1218290:CDS
GGAATTTCTGACGGTCTTAT+GGG 0.349221 8_1:+80921583 Msa1218290:CDS
GAACAAGGTAATCTCCAAAA+TGG 0.349947 8_1:+80922045 Msa1218290:CDS
CTAGACTTTGCGCTGGGAGC+TGG 0.350433 8_1:-80921165 None:intergenic
GAAAACCCAAGGTTGAGATT+TGG 0.350909 8_1:+80921277 Msa1218290:CDS
AGCAGAGATGCTTCTTTGCT+TGG 0.351628 8_1:+80921991 Msa1218290:CDS
AAATGTTGCCAGCCACTTGC+AGG 0.358647 8_1:+80920886 Msa1218290:CDS
GAAGTTAATTCGGGAATTAA+AGG 0.362242 8_1:+80921778 Msa1218290:CDS
AGAACATATTGGATTGGAAA+TGG 0.369734 8_1:+80919690 Msa1218290:CDS
TAAAGAAGCCTCGGGTTGTT+TGG 0.371579 8_1:+80920133 Msa1218290:CDS
CCAGCAGAAATCCCGGGATT+GGG 0.372360 8_1:+80921843 Msa1218290:CDS
CAAATATTCTTCAAACTTCT+GGG 0.373124 8_1:+80922516 Msa1218290:three_prime_UTR
CTTTGTACATGAACATGGTT+TGG 0.376891 8_1:+80922964 Msa1218290:three_prime_UTR
TGAAAATTCAACAAGGGTTA+AGG 0.379057 8_1:+80922098 Msa1218290:CDS
CTGGGAGTAGTGTACTATAA+TGG 0.381832 8_1:+80922534 Msa1218290:three_prime_UTR
CCAAGATTACCGAACCTCTT+GGG 0.383663 8_1:+80921541 Msa1218290:CDS
AATGTTGACTGCCACCATTT+TGG 0.384208 8_1:-80922059 None:intergenic
CATGAGTGCACTTCTGAAAC+AGG 0.384874 8_1:+80922188 Msa1218290:CDS
TTTCAAGCCGAAGTTAATTC+GGG 0.385444 8_1:+80921769 Msa1218290:CDS
TGCTGCAGACTGGTGCAAAT+TGG 0.390973 8_1:-80921392 None:intergenic
AACGAAGAGCTCTGTGGAAC+AGG 0.393856 8_1:-80921649 None:intergenic
TTTCTCTCTTGGAGAAGGCT+TGG 0.399650 8_1:+80922023 Msa1218290:CDS
CAGCAGCCACAAACTGTTGA+TGG 0.399900 8_1:-80920167 None:intergenic
TCTGTTAGTAATTTCCCTCT+TGG 0.407707 8_1:+80921706 Msa1218290:CDS
CGAGCTCCATCAACAGTTTG+TGG 0.408027 8_1:+80920161 Msa1218290:CDS
CCTTCTCCAAATCTCAACCT+TGG 0.410833 8_1:-80921283 None:intergenic
CCCAAGAGGTTCGGTAATCT+TGG 0.413044 8_1:-80921541 None:intergenic
TTCGGCTTGAAATGAGCCTT+TGG 0.414980 8_1:-80921758 None:intergenic
GTGATCATGAGCATACTTTA+GGG 0.418715 8_1:+80923039 Msa1218290:three_prime_UTR
TTCAAAGCCTCAATACGAAC+AGG 0.419602 8_1:-80919904 None:intergenic
TAGGAATCTAGACTAATAGA+AGG 0.419625 8_1:+80923086 Msa1218290:three_prime_UTR
GGCTGAGAAATGAATTATTC+TGG 0.423210 8_1:-80921072 None:intergenic
CCCAATCCCGGGATTTCTGC+TGG 0.423497 8_1:-80921843 None:intergenic
TTCCCTCTTGGAAGCACTCC+AGG 0.424109 8_1:+80921718 Msa1218290:CDS
AGCCCACAAGAGGCATCATT+TGG 0.424795 8_1:+80921091 Msa1218290:CDS
TGCTTTGGCTCCATGTTAGT+AGG 0.429194 8_1:-80921364 None:intergenic
ACCAGCAGAAATCCCGGGAT+TGG 0.435479 8_1:+80921842 Msa1218290:CDS
AGTCCCCGCTTCTGCTACAC+AGG 0.436130 8_1:+80921441 Msa1218290:CDS
TTGAGGCTTTGAAGAACATA+TGG 0.437862 8_1:+80919914 Msa1218290:CDS
GTTCTTGAAGAGGTATGCTT+GGG 0.439729 8_1:+80922690 Msa1218290:three_prime_UTR
CAAGGGACTGTGCTGCAGAC+TGG 0.442581 8_1:-80921402 None:intergenic
GAAGAGGTATGCTTGGGTTA+GGG 0.445920 8_1:+80922696 Msa1218290:three_prime_UTR
ACTCTTCAAGCAGCAGGACT+TGG 0.447810 8_1:+80921190 Msa1218290:CDS
ACTCTTAGAACATATTGGAT+TGG 0.448527 8_1:+80919684 Msa1218290:CDS
GATTAAACCTGTTCGTATTG+AGG 0.449126 8_1:+80919897 Msa1218290:CDS
ATTTCAGTGCTTTGATTCAT+GGG 0.452203 8_1:-80921682 None:intergenic
TTAGTATGGGAGCTCGCGTC+AGG 0.455250 8_1:-80922132 None:intergenic
CTTTGATCCATGAGAGGCAT+TGG 0.455626 8_1:-80921238 None:intergenic
TGTACTATAATGGTTTAGTC+TGG 0.456530 8_1:+80922544 Msa1218290:three_prime_UTR
TGACTTTGACGGGTATTCTC+TGG 0.456582 8_1:+80922341 Msa1218290:CDS
AGAATGAGTTTGACTTTGAC+GGG 0.456863 8_1:+80922331 Msa1218290:CDS
ATCACTGTCTTCATCTCATA+AGG 0.457292 8_1:-80923021 Msa1218300:intron
TCCAAGATTACCGAACCTCT+TGG 0.457743 8_1:+80921540 Msa1218290:CDS
TGTTCTTGAAGAGGTATGCT+TGG 0.458201 8_1:+80922689 Msa1218290:three_prime_UTR
CTTCAAACTCTTGCAGCAGC+TGG 0.460273 8_1:+80921142 Msa1218290:CDS
GAAGAACATAAAATTAAAAG+AGG 0.460919 8_1:-80922813 Msa1218300:intron
TCGGGAATTAAAGGATCAGC+TGG 0.463527 8_1:+80921787 Msa1218290:CDS
AGGCTTACCAATGCCTCTCA+TGG 0.463932 8_1:+80921231 Msa1218290:CDS
TATTCGTCTTCTGCTAATGA+AGG 0.466948 8_1:+80920039 Msa1218290:CDS
AACTGAACCAGCAGAAATCC+CGG 0.470254 8_1:+80921836 Msa1218290:CDS
TAGCATTGGACCTCTAGGTT+GGG 0.471457 8_1:-80921494 None:intergenic
GGTAGGTCAACTGTGAAATC+AGG 0.471735 8_1:+80921211 Msa1218290:CDS
AAACTGATCGGAACCTTCAC+CGG 0.472593 8_1:-80918956 None:intergenic
TTCAAAGAGAACGCAAGAAT+CGG 0.475865 8_1:-80918765 None:intergenic
AATCTAAGCAACAACGGAAA+AGG 0.481027 8_1:+80918892 Msa1218290:CDS
TCACTTAGCATTGGACCTCT+AGG 0.481945 8_1:-80921499 None:intergenic
TGCCAAATGATGCCTCTTGT+GGG 0.486957 8_1:-80921093 None:intergenic
TTTCCCTGTGTAGCAGAAGC+GGG 0.487937 8_1:-80921445 None:intergenic
AAACCAACAAATCTTCTTCA+CGG 0.488919 8_1:+80921337 Msa1218290:CDS
ACTCCGTGAAGAAGATTTGT+TGG 0.489018 8_1:-80921340 None:intergenic
CAGCAGAAATCCCGGGATTG+GGG 0.489487 8_1:+80921844 Msa1218290:CDS
TCTCCTTTCTCTCTTGGAGA+AGG 0.491761 8_1:+80922018 Msa1218290:CDS
AGTTTAAATCCATCCATGTC+TGG 0.492706 8_1:-80919664 None:intergenic
TTTAATTCCCGAATTAACTT+CGG 0.493406 8_1:-80921776 None:intergenic
GGGCAGTCTACTGTGTCAAA+TGG 0.502999 8_1:+80921562 Msa1218290:CDS
AAGCCTTCTCCAAGAGAGAA+AGG 0.504157 8_1:-80922021 None:intergenic
TGTGCCATCTGCATCAATAA+GGG 0.506429 8_1:-80921469 None:intergenic
TGGAAAGATACGGAGCAGTC+GGG 0.506488 8_1:+80919967 Msa1218290:CDS
GACCGAAGAACATAAACATC+CGG 0.506870 8_1:-80922906 Msa1218300:intron
CTACTCAGAGAGAACAAGAA+TGG 0.509140 8_1:+80919610 Msa1218290:CDS
TTCTTGCAGCAGGAAGGCAT+TGG 0.511048 8_1:+80922303 Msa1218290:intron
CCAATGCTAAGTGAAAATAC+TGG 0.512986 8_1:+80921508 Msa1218290:CDS
GTATGATACCTGCAAGTGGC+TGG 0.513699 8_1:-80920894 None:intergenic
ACATATGGCAGCATGTGGTT+CGG 0.513719 8_1:+80919929 Msa1218290:CDS
TTGCGCACATGTCTTTATGA+AGG 0.513753 8_1:+80919045 Msa1218290:CDS
GTAGACTGCCCCAAGAGGTT+CGG 0.516395 8_1:-80921550 None:intergenic
AGAAGGGATGATGAAGAGGA+AGG 0.517568 8_1:+80920084 Msa1218290:CDS
ACATCGATGTTGCCATGTAA+AGG 0.519974 8_1:-80921913 None:intergenic
AGAAGCATCTCTGCTATGTC+CGG 0.523262 8_1:-80921983 None:intergenic
AGGAATCATATGTTAGACCT+TGG 0.524315 8_1:-80921876 None:intergenic
GAGAATGAGTTTGACTTTGA+CGG 0.527613 8_1:+80922330 Msa1218290:CDS
AAAGAGAAGGGATGATGAAG+AGG 0.527771 8_1:+80920080 Msa1218290:CDS
GTGCCAAATGATGCCTCTTG+TGG 0.529194 8_1:-80921094 None:intergenic
CTTCCCTGATAATTTCGGGC+AGG 0.529625 8_1:+80922158 Msa1218290:CDS
CGTCAACACTAAAGAAGCCT+CGG 0.531313 8_1:+80920124 Msa1218290:CDS
TGGTAAAAGTGTTGTTATGA+AGG 0.536755 8_1:+80919846 Msa1218290:CDS
TGGAATTGATGAATGTTCCT+GGG 0.540747 8_1:+80920852 Msa1218290:CDS
CTAGCCACTCTTCAAGCAGC+AGG 0.540998 8_1:+80921184 Msa1218290:CDS
TCAACAGTTTGTGGCTGCTG+TGG 0.541281 8_1:+80920170 Msa1218290:CDS
CAGTCTGCAGCACAGTCCCT+TGG 0.541662 8_1:+80921403 Msa1218290:CDS
TTAGCATTGGACCTCTAGGT+TGG 0.542224 8_1:-80921495 None:intergenic
TTGTGTTTCTTGCAGCAGGA+AGG 0.544167 8_1:+80922297 Msa1218290:intron
CAAGGTTGAGATTTGGAGAA+GGG 0.545110 8_1:+80921284 Msa1218290:CDS
CAAGATTACCGAACCTCTTG+GGG 0.546140 8_1:+80921542 Msa1218290:CDS
GGCACGATTTCGTCAATGAA+CGG 0.547334 8_1:+80921112 Msa1218290:CDS
CTCGCATATTCATGTTGCCA+AGG 0.547462 8_1:-80921420 None:intergenic
TAGTCTAGATTCCTACAAAG+AGG 0.550180 8_1:-80923078 Msa1218300:intron
ACTGCTACTACTATGAAATC+CGG 0.552368 8_1:+80918937 Msa1218290:CDS
GTGGAAAGATACGGAGCAGT+CGG 0.552841 8_1:+80919966 Msa1218290:CDS
TTCATTTCTCAGCCCACAAG+AGG 0.554489 8_1:+80921081 Msa1218290:CDS
GAGCAGAAGAAAAGCCCTGA+TGG 0.559461 8_1:-80921954 None:intergenic
GCCCGAAATTATCAGGGAAG+AGG 0.559846 8_1:-80922155 None:intergenic
CAATGCCTCTCATGGATCAA+AGG 0.561353 8_1:+80921239 Msa1218290:CDS
CTTGGAGAAGGCTTGGAACA+AGG 0.563016 8_1:+80922030 Msa1218290:CDS
TCGCATGCAAATCCTTTACA+TGG 0.566200 8_1:+80921901 Msa1218290:CDS
CAGCTGCTGCAAGAGTTTGA+AGG 0.567437 8_1:-80921141 None:intergenic
GGAGAAACTCGAGAAAGAGA+AGG 0.568448 8_1:+80920067 Msa1218290:CDS
AGGGCAGAATTGCAGAAGCA+AGG 0.569014 8_1:+80922715 Msa1218290:three_prime_UTR
AAAGAACGAGTGGAAAGATA+CGG 0.569117 8_1:+80919957 Msa1218290:CDS
CTCAAGAATCATAAGACACG+TGG 0.569208 8_1:-80919016 None:intergenic
GAATTCTTTGTACATGAACA+TGG 0.574074 8_1:+80922959 Msa1218290:three_prime_UTR
TAACTGCAATCAGAAAGAAC+TGG 0.577103 8_1:-80922393 None:intergenic
AAATCCCTTATTGATGCAGA+TGG 0.581980 8_1:+80921465 Msa1218290:CDS
TCACGGAGTTCCTACTAACA+TGG 0.585473 8_1:+80921354 Msa1218290:CDS
AATATCGATTGTATCTTCGA+AGG 0.588508 8_1:+80921029 Msa1218290:CDS
GTGGCTGCTGTGGATCAACT+AGG 0.590323 8_1:+80920180 Msa1218290:CDS
GAGAAACTCGAGAAAGAGAA+GGG 0.591527 8_1:+80920068 Msa1218290:CDS
TAAACCCGCCGGAAACTGAT+CGG 0.593099 8_1:-80918968 None:intergenic
GTAGTGATGTCTGCCGATGA+TGG 0.594746 8_1:+80919826 Msa1218290:intron
ATTTCCCTGTGTAGCAGAAG+CGG 0.596362 8_1:-80921446 None:intergenic
ATCAGGGAAGAGGTTAGTAT+GGG 0.598648 8_1:-80922145 None:intergenic
GGTTCCGATCAGTTTCCGGC+GGG 0.599863 8_1:+80918964 Msa1218290:CDS
ACTACTATGAAATCCGGTGA+AGG 0.600055 8_1:+80918943 Msa1218290:CDS
CCAAGGTTGAGATTTGGAGA+AGG 0.603069 8_1:+80921283 Msa1218290:CDS
AGAGTGGCTAGACTTTGCGC+TGG 0.604456 8_1:-80921172 None:intergenic
GTGCATATGCCAGACATGGA+TGG 0.605390 8_1:+80919655 Msa1218290:CDS
TTATGTTGAAAATTCAACAA+GGG 0.606022 8_1:+80922092 Msa1218290:CDS
GAATTTCTGACGGTCTTATG+GGG 0.610921 8_1:+80921584 Msa1218290:CDS
GAGTGGCTAGACTTTGCGCT+GGG 0.613125 8_1:-80921171 None:intergenic
CAACATCGATGTCTCTCCGT+CGG 0.614346 8_1:+80921924 Msa1218290:CDS
ATATCTAGTATCACAACCAA+AGG 0.615031 8_1:+80921742 Msa1218290:CDS
AGTACTTACTAATAACTGGA+AGG 0.615916 8_1:-80919714 None:intergenic
GGTAAAAGTGTTGTTATGAA+GGG 0.618959 8_1:+80919847 Msa1218290:CDS
GTCAACACTAAAGAAGCCTC+GGG 0.618987 8_1:+80920125 Msa1218290:CDS
AAGTCCTGCTGCTTGAAGAG+TGG 0.619281 8_1:-80921188 None:intergenic
GCAGTCGGGTAGTGCTGACG+AGG 0.619983 8_1:+80919981 Msa1218290:CDS
AACAGTATGATACCTGCAAG+TGG 0.620491 8_1:-80920898 None:intergenic
GTGTCAAATGGAATTTCTGA+CGG 0.620630 8_1:+80921574 Msa1218290:CDS
AGCAGAAATCCCGGGATTGG+GGG 0.622120 8_1:+80921845 Msa1218290:CDS
TTGTATCTTCGAAGGCTGAG+TGG 0.625218 8_1:+80921037 Msa1218290:CDS
GAAGAACATATGGCAGCATG+TGG 0.630309 8_1:+80919924 Msa1218290:CDS
CATCCTGCCCGAAATTATCA+GGG 0.630656 8_1:-80922161 None:intergenic
AGGTTCCTTTGATCCATGAG+AGG 0.631553 8_1:-80921244 None:intergenic
CCCTGATGGACTAAAACCGA+CGG 0.643382 8_1:-80921940 None:intergenic
ATAAATCTGCAAACTCGCGT+AGG 0.643837 8_1:+80922743 Msa1218290:three_prime_UTR
CAAGGTAATCTCCAAAATGG+TGG 0.644703 8_1:+80922048 Msa1218290:CDS
TCGCATATTCATGTTGCCAA+GGG 0.645505 8_1:-80921419 None:intergenic
ACTGAACCAGCAGAAATCCC+GGG 0.645616 8_1:+80921837 Msa1218290:CDS
GTTGTCGAATAATTTAGACT+CGG 0.649630 8_1:-80922477 None:intergenic
AGGTTCCGATCAGTTTCCGG+CGG 0.652193 8_1:+80918963 Msa1218290:CDS
TACCTGGAGTGCTTCCAAGA+GGG 0.655640 8_1:-80921720 None:intergenic
GTTGTGATACTAGATATACC+TGG 0.656765 8_1:-80921736 None:intergenic
TTCCCTGTGTAGCAGAAGCG+GGG 0.660017 8_1:-80921444 None:intergenic
TTCAAGCAGCAGGACTTGGT+AGG 0.662359 8_1:+80921194 Msa1218290:CDS
ACACAGTAGACTGCCCCAAG+AGG 0.664618 8_1:-80921555 None:intergenic
TTTATGTTGAAAATTCAACA+AGG 0.669918 8_1:+80922091 Msa1218290:CDS
TAAAGGATTTGCATGCGATG+AGG 0.672320 8_1:-80921896 None:intergenic
TGATGTGCATATGCCAGACA+TGG 0.676897 8_1:+80919651 Msa1218290:CDS
ACGAGAACTCGTAAACCCGC+CGG 0.676939 8_1:-80918979 None:intergenic
TCTTATGGGGAGAAATAACA+TGG 0.679947 8_1:+80921597 Msa1218290:CDS
CAGTCGGGTAGTGCTGACGA+GGG 0.681841 8_1:+80919982 Msa1218290:CDS
ATACCTGGAGTGCTTCCAAG+AGG 0.686422 8_1:-80921721 None:intergenic
GTGACAGCAACTATTTACAC+CGG 0.687900 8_1:-80922416 None:intergenic
TCGACAGACCAAACAACCCG+AGG 0.690366 8_1:-80920141 None:intergenic
TCAAGAATCATAAGACACGT+GGG 0.691685 8_1:-80919015 None:intergenic
GGGTTTACGAGTTCTCGTTG+TGG 0.701370 8_1:+80918984 Msa1218290:CDS
ATGATGAATCTAAGCAACAA+CGG 0.705147 8_1:+80918886 Msa1218290:CDS
GTCCCCGCTTCTGCTACACA+GGG 0.706393 8_1:+80921442 Msa1218290:CDS
ATGGCACAATCCCAACCTAG+AGG 0.710994 8_1:+80921484 Msa1218290:CDS
TTGACCGCATAAAATGCACA+AGG 0.724437 8_1:+80922604 Msa1218290:three_prime_UTR
TGTGGAACAGGATTAAACGA+AGG 0.733577 8_1:-80921637 None:intergenic
GTTATGAAGGGTGTAACACA+TGG 0.742807 8_1:+80919859 Msa1218290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGGTTTTAAAGAAAATT+TGG - chr8_1:80920447-80920466 None:intergenic 15.0%
!!! TATAATTCTTTTAAAAACAC+TGG - chr8_1:80920705-80920724 None:intergenic 15.0%
!!! AAAAAATGATTTGTTTGTAA+TGG - chr8_1:80922279-80922298 None:intergenic 15.0%
!!! CATGTGTAAATATTTTTATT+TGG + chr8_1:80922851-80922870 Msa1218290:three_prime_UTR 15.0%
!!! TTATTTGTGATTTTATGTTA+TGG + chr8_1:80922990-80923009 Msa1218290:three_prime_UTR 15.0%
!!! TCATGTTTTGTTTATTGTTT+TGG + chr8_1:80918848-80918867 Msa1218290:five_prime_UTR 20.0%
!!! TTTTTGAATAGTTTGCATAT+GGG - chr8_1:80919200-80919219 None:intergenic 20.0%
!!! TTTTTTGAATAGTTTGCATA+TGG - chr8_1:80919201-80919220 None:intergenic 20.0%
!! TCAAAATGAAAATCAAAATC+TGG - chr8_1:80919406-80919425 None:intergenic 20.0%
!!! TTTAAAATACCATTGAAACA+TGG + chr8_1:80919435-80919454 Msa1218290:intron 20.0%
!! TTTAAACTCTTAGAACATAT+TGG + chr8_1:80919679-80919698 Msa1218290:CDS 20.0%
!!! ACTATTGATTCATTTCTTAT+TGG + chr8_1:80920534-80920553 Msa1218290:intron 20.0%
!! ATCTATTATAGAACTAATAG+AGG - chr8_1:80920562-80920581 None:intergenic 20.0%
!!! ATCAATTCCAGAATTTTTTT+GGG - chr8_1:80920842-80920861 None:intergenic 20.0%
!!! AGGGATATAAAATTTAACTT+GGG - chr8_1:80920945-80920964 None:intergenic 20.0%
!! TAGGGATATAAAATTTAACT+TGG - chr8_1:80920946-80920965 None:intergenic 20.0%
!! TCGTTAAAAATATCATAACT+TGG - chr8_1:80921817-80921836 None:intergenic 20.0%
!! TTTATGTTGAAAATTCAACA+AGG + chr8_1:80922091-80922110 Msa1218290:CDS 20.0%
!! TTATGTTGAAAATTCAACAA+GGG + chr8_1:80922092-80922111 Msa1218290:CDS 20.0%
!! GAAGAACATAAAATTAAAAG+AGG - chr8_1:80922816-80922835 Msa1218300:intron 20.0%
! GAATAATTAAGATTCAGTTG+TGG + chr8_1:80920372-80920391 Msa1218290:intron 25.0%
! AATCAATAGTAGAACTTCTA+GGG - chr8_1:80920524-80920543 None:intergenic 25.0%
! CATACAAGAAAAATGTATGA+CGG - chr8_1:80920642-80920661 None:intergenic 25.0%
!!! ATTCTTTTAAAAACACTGGA+TGG - chr8_1:80920701-80920720 None:intergenic 25.0%
! AGGTACTCAAACAAATATTA+GGG - chr8_1:80920748-80920767 None:intergenic 25.0%
!! AAGGTACTCAAACAAATATT+AGG - chr8_1:80920749-80920768 None:intergenic 25.0%
! AGAAATATCAAACTTGAATC+AGG - chr8_1:80920805-80920824 None:intergenic 25.0%
!!! CATCAATTCCAGAATTTTTT+TGG - chr8_1:80920843-80920862 None:intergenic 25.0%
! TTTAATTCCCGAATTAACTT+CGG - chr8_1:80921779-80921798 None:intergenic 25.0%
!! GTTGAATTTTCAACATAAAG+AGG - chr8_1:80922090-80922109 None:intergenic 25.0%
! CTCATAATTCATTCTTTCTA+TGG + chr8_1:80922219-80922238 Msa1218290:intron 25.0%
! TCAAATATTCTTCAAACTTC+TGG + chr8_1:80922515-80922534 Msa1218290:three_prime_UTR 25.0%
! CAAATATTCTTCAAACTTCT+GGG + chr8_1:80922516-80922535 Msa1218290:three_prime_UTR 25.0%
!! TCTAGCAATGTTCTAATTTT+AGG + chr8_1:80922665-80922684 Msa1218290:three_prime_UTR 25.0%
!! CTAGCAATGTTCTAATTTTA+GGG + chr8_1:80922666-80922685 Msa1218290:three_prime_UTR 25.0%
ATGATGAATCTAAGCAACAA+CGG + chr8_1:80918886-80918905 Msa1218290:CDS 30.0%
CGCTTAATTACTTGATTAGT+TGG + chr8_1:80919137-80919156 Msa1218290:intron 30.0%
!!! GACCTTTTTTTCTTCTTCTT+TGG + chr8_1:80919309-80919328 Msa1218290:intron 30.0%
AGCCAAAGAAGAAGAAAAAA+AGG - chr8_1:80919314-80919333 None:intergenic 30.0%
!!! TTTTTTTCTTCTTCTTTGGC+TGG + chr8_1:80919313-80919332 Msa1218290:intron 30.0%
ACTCTTAGAACATATTGGAT+TGG + chr8_1:80919684-80919703 Msa1218290:CDS 30.0%
! AGAACATATTGGATTGGAAA+TGG + chr8_1:80919690-80919709 Msa1218290:CDS 30.0%
AGTACTTACTAATAACTGGA+AGG - chr8_1:80919717-80919736 None:intergenic 30.0%
! CCAAAGTACTTACTAATAAC+TGG - chr8_1:80919721-80919740 None:intergenic 30.0%
CCAGTTATTAGTAAGTACTT+TGG + chr8_1:80919718-80919737 Msa1218290:intron 30.0%
! AACAACACTTTTACCATCAT+CGG - chr8_1:80919842-80919861 None:intergenic 30.0%
!! TGGTAAAAGTGTTGTTATGA+AGG + chr8_1:80919846-80919865 Msa1218290:CDS 30.0%
!! GGTAAAAGTGTTGTTATGAA+GGG + chr8_1:80919847-80919866 Msa1218290:CDS 30.0%
!! AAAAACTTTTGAAGAGTCCT+GGG - chr8_1:80920227-80920246 None:intergenic 30.0%
!! AAAAAACTTTTGAAGAGTCC+TGG - chr8_1:80920228-80920247 None:intergenic 30.0%
ATAGAGAACTAAGAAACTGT+AGG - chr8_1:80920498-80920517 None:intergenic 30.0%
GAATCAATAGTAGAACTTCT+AGG - chr8_1:80920525-80920544 None:intergenic 30.0%
TAATAGATTGAACTGCTTCA+AGG + chr8_1:80920574-80920593 Msa1218290:intron 30.0%
AATAGATTGAACTGCTTCAA+GGG + chr8_1:80920575-80920594 Msa1218290:intron 30.0%
! TATATCCCTATGTTTTCTTG+TGG + chr8_1:80920956-80920975 Msa1218290:intron 30.0%
! AATATCGATTGTATCTTCGA+AGG + chr8_1:80921029-80921048 Msa1218290:CDS 30.0%
! TTGGGTTTTCAAAACTGAAA+AGG - chr8_1:80921267-80921286 None:intergenic 30.0%
!!! TTTTCAGTTTTGAAAACCCA+AGG + chr8_1:80921266-80921285 Msa1218290:CDS 30.0%
AAACCAACAAATCTTCTTCA+CGG + chr8_1:80921337-80921356 Msa1218290:CDS 30.0%
ATTTCAGTGCTTTGATTCAT+GGG - chr8_1:80921685-80921704 None:intergenic 30.0%
ATATCTAGTATCACAACCAA+AGG + chr8_1:80921742-80921761 Msa1218290:CDS 30.0%
ATTTCAAGCCGAAGTTAATT+CGG + chr8_1:80921768-80921787 Msa1218290:CDS 30.0%
GAAGTTAATTCGGGAATTAA+AGG + chr8_1:80921778-80921797 Msa1218290:CDS 30.0%
TGAAAATTCAACAAGGGTTA+AGG + chr8_1:80922098-80922117 Msa1218290:CDS 30.0%
GTTGTCGAATAATTTAGACT+CGG - chr8_1:80922480-80922499 None:intergenic 30.0%
TGTACTATAATGGTTTAGTC+TGG + chr8_1:80922544-80922563 Msa1218290:three_prime_UTR 30.0%
! TTGTTCTGACTATTCTTTTC+CGG + chr8_1:80922887-80922906 Msa1218290:three_prime_UTR 30.0%
GAATTCTTTGTACATGAACA+TGG + chr8_1:80922959-80922978 Msa1218290:three_prime_UTR 30.0%
TTCAAAGAGAACGCAAGAAT+CGG - chr8_1:80918768-80918787 None:intergenic 35.0%
AATCTAAGCAACAACGGAAA+AGG + chr8_1:80918892-80918911 Msa1218290:CDS 35.0%
ACTGCTACTACTATGAAATC+CGG + chr8_1:80918937-80918956 Msa1218290:CDS 35.0%
TCAAGAATCATAAGACACGT+GGG - chr8_1:80919018-80919037 None:intergenic 35.0%
AGCTCAAAACCATGTTTCAA+TGG - chr8_1:80919447-80919466 None:intergenic 35.0%
AGTTTAAATCCATCCATGTC+TGG - chr8_1:80919667-80919686 None:intergenic 35.0%
GATTAAACCTGTTCGTATTG+AGG + chr8_1:80919897-80919916 Msa1218290:CDS 35.0%
!! TTGAGGCTTTGAAGAACATA+TGG + chr8_1:80919914-80919933 Msa1218290:CDS 35.0%
AAAGAACGAGTGGAAAGATA+CGG + chr8_1:80919957-80919976 Msa1218290:CDS 35.0%
TATTCGTCTTCTGCTAATGA+AGG + chr8_1:80920039-80920058 Msa1218290:CDS 35.0%
CTTCTGCTAATGAAGGAAAT+TGG + chr8_1:80920046-80920065 Msa1218290:CDS 35.0%
! GTCTTTTAGATAGATCTGCA+CGG - chr8_1:80920273-80920292 None:intergenic 35.0%
GCAATCAAGTTTCATCCTAT+TGG + chr8_1:80920408-80920427 Msa1218290:intron 35.0%
TCAAGTTTCATCCTATTGGT+TGG + chr8_1:80920412-80920431 Msa1218290:intron 35.0%
GAGAAAGACAATACGCTAAA+TGG - chr8_1:80920464-80920483 None:intergenic 35.0%
GACGGAAAATGAATACATTC+AGG - chr8_1:80920624-80920643 None:intergenic 35.0%
AAACCTTAGCAATCTCATCT+TGG + chr8_1:80920671-80920690 Msa1218290:intron 35.0%
!! ACCTTAGCTATGAAGTATTG+TGG + chr8_1:80920764-80920783 Msa1218290:intron 35.0%
ACCACAATACTTCATAGCTA+AGG - chr8_1:80920768-80920787 None:intergenic 35.0%
TGGAATTGATGAATGTTCCT+GGG + chr8_1:80920852-80920871 Msa1218290:CDS 35.0%
GATGACCACAAGAAAACATA+GGG - chr8_1:80920964-80920983 None:intergenic 35.0%
AGATGACCACAAGAAAACAT+AGG - chr8_1:80920965-80920984 None:intergenic 35.0%
! GTTTTCTTGTGGTCATCTAA+CGG + chr8_1:80920967-80920986 Msa1218290:intron 35.0%
GGCTGAGAAATGAATTATTC+TGG - chr8_1:80921075-80921094 None:intergenic 35.0%
AAATCCCTTATTGATGCAGA+TGG + chr8_1:80921465-80921484 Msa1218290:CDS 35.0%
! CCAGTATTTTCACTTAGCAT+TGG - chr8_1:80921511-80921530 None:intergenic 35.0%
CCAATGCTAAGTGAAAATAC+TGG + chr8_1:80921508-80921527 Msa1218290:CDS 35.0%
GTGTCAAATGGAATTTCTGA+CGG + chr8_1:80921574-80921593 Msa1218290:CDS 35.0%
TCTTATGGGGAGAAATAACA+TGG + chr8_1:80921597-80921616 Msa1218290:CDS 35.0%
CATTTCAGTGCTTTGATTCA+TGG - chr8_1:80921686-80921705 None:intergenic 35.0%
TCTGTTAGTAATTTCCCTCT+TGG + chr8_1:80921706-80921725 Msa1218290:CDS 35.0%
GTTGTGATACTAGATATACC+TGG - chr8_1:80921739-80921758 None:intergenic 35.0%
TTTCAAGCCGAAGTTAATTC+GGG + chr8_1:80921769-80921788 Msa1218290:CDS 35.0%
AGGAATCATATGTTAGACCT+TGG - chr8_1:80921879-80921898 None:intergenic 35.0%
! TTTTCTTCTGCTCAACAAAC+CGG + chr8_1:80921964-80921983 Msa1218290:CDS 35.0%
GAACAAGGTAATCTCCAAAA+TGG + chr8_1:80922045-80922064 Msa1218290:CDS 35.0%
AACCTCTTCCCTGATAATTT+CGG + chr8_1:80922153-80922172 Msa1218290:CDS 35.0%
!!! TTTTTTGTGTTTCTTGCAGC+AGG + chr8_1:80922293-80922312 Msa1218290:intron 35.0%
! GAGAATGAGTTTGACTTTGA+CGG + chr8_1:80922330-80922349 Msa1218290:CDS 35.0%
! AGAATGAGTTTGACTTTGAC+GGG + chr8_1:80922331-80922350 Msa1218290:CDS 35.0%
TAACTGCAATCAGAAAGAAC+TGG - chr8_1:80922396-80922415 None:intergenic 35.0%
TTCTTTCTGATTGCAGTTAC+CGG + chr8_1:80922397-80922416 Msa1218290:three_prime_UTR 35.0%
!!! ATTTTAGGGTGTTCTTGAAG+AGG + chr8_1:80922680-80922699 Msa1218290:three_prime_UTR 35.0%
TTCCGGATGTTTATGTTCTT+CGG + chr8_1:80922904-80922923 Msa1218290:three_prime_UTR 35.0%
CTTTGTACATGAACATGGTT+TGG + chr8_1:80922964-80922983 Msa1218290:three_prime_UTR 35.0%
ATCACTGTCTTCATCTCATA+AGG - chr8_1:80923024-80923043 Msa1218300:intron 35.0%
AGTGATCATGAGCATACTTT+AGG + chr8_1:80923038-80923057 Msa1218290:three_prime_UTR 35.0%
GTGATCATGAGCATACTTTA+GGG + chr8_1:80923039-80923058 Msa1218290:three_prime_UTR 35.0%
TCAGTACTTAACCTCTTTGT+AGG + chr8_1:80923067-80923086 Msa1218290:three_prime_UTR 35.0%
TAGTCTAGATTCCTACAAAG+AGG - chr8_1:80923081-80923100 Msa1218300:intron 35.0%
ACTACTATGAAATCCGGTGA+AGG + chr8_1:80918943-80918962 Msa1218290:CDS 40.0%
CTCAAGAATCATAAGACACG+TGG - chr8_1:80919019-80919038 None:intergenic 40.0%
TTGCGCACATGTCTTTATGA+AGG + chr8_1:80919045-80919064 Msa1218290:CDS 40.0%
!!! GAAACATGGTTTTGAGCTAC+TGG + chr8_1:80919449-80919468 Msa1218290:intron 40.0%
CTACTCAGAGAGAACAAGAA+TGG + chr8_1:80919610-80919629 Msa1218290:CDS 40.0%
! GTTATGAAGGGTGTAACACA+TGG + chr8_1:80919859-80919878 Msa1218290:CDS 40.0%
TTCAAAGCCTCAATACGAAC+AGG - chr8_1:80919907-80919926 None:intergenic 40.0%
TTCGGAAGAAAAAGAACGAG+TGG + chr8_1:80919947-80919966 Msa1218290:CDS 40.0%
! TCAGCATCATCAGATGCTTT+TGG - chr8_1:80920018-80920037 None:intergenic 40.0%
GAGAAACTCGAGAAAGAGAA+GGG + chr8_1:80920068-80920087 Msa1218290:CDS 40.0%
AAAGAGAAGGGATGATGAAG+AGG + chr8_1:80920080-80920099 Msa1218290:CDS 40.0%
TAGATCTGCACGGAAAACAA+AGG - chr8_1:80920263-80920282 None:intergenic 40.0%
GGTTTCTGATACCAACCAAT+AGG - chr8_1:80920426-80920445 None:intergenic 40.0%
GAGATTGCTAAGGTTTGTGA+TGG - chr8_1:80920667-80920686 None:intergenic 40.0%
GAACCAAGATGAGATTGCTA+AGG - chr8_1:80920677-80920696 None:intergenic 40.0%
! AGTTTGATATTTCTGCGCAG+AGG + chr8_1:80920811-80920830 Msa1218290:intron 40.0%
GGCTGTTCCCAAAAAAATTC+TGG + chr8_1:80920832-80920851 Msa1218290:CDS 40.0%
CTGGAATTGATGAATGTTCC+TGG + chr8_1:80920851-80920870 Msa1218290:CDS 40.0%
AACAGTATGATACCTGCAAG+TGG - chr8_1:80920901-80920920 None:intergenic 40.0%
GTTATTCGCCTACTTCAGAA+AGG + chr8_1:80920918-80920937 Msa1218290:intron 40.0%
GAAAACCCAAGGTTGAGATT+TGG + chr8_1:80921277-80921296 Msa1218290:CDS 40.0%
CTTCTCCAAATCTCAACCTT+GGG - chr8_1:80921285-80921304 None:intergenic 40.0%
CAAGGTTGAGATTTGGAGAA+GGG + chr8_1:80921284-80921303 Msa1218290:CDS 40.0%
! GGGCAACAACAACTTTTGAA+TGG + chr8_1:80921304-80921323 Msa1218290:CDS 40.0%
ACTCCGTGAAGAAGATTTGT+TGG - chr8_1:80921343-80921362 None:intergenic 40.0%
TCGCATATTCATGTTGCCAA+GGG - chr8_1:80921422-80921441 None:intergenic 40.0%
TGTGCCATCTGCATCAATAA+GGG - chr8_1:80921472-80921491 None:intergenic 40.0%
TTGTGCCATCTGCATCAATA+AGG - chr8_1:80921473-80921492 None:intergenic 40.0%
TGGAATTTCTGACGGTCTTA+TGG + chr8_1:80921582-80921601 Msa1218290:CDS 40.0%
! GGAATTTCTGACGGTCTTAT+GGG + chr8_1:80921583-80921602 Msa1218290:CDS 40.0%
! GAATTTCTGACGGTCTTATG+GGG + chr8_1:80921584-80921603 Msa1218290:CDS 40.0%
TGTGGAACAGGATTAAACGA+AGG - chr8_1:80921640-80921659 None:intergenic 40.0%
TTCAAAAACGAAGAGCTCTG+TGG - chr8_1:80921658-80921677 None:intergenic 40.0%
TAAAGGATTTGCATGCGATG+AGG - chr8_1:80921899-80921918 None:intergenic 40.0%
TCGCATGCAAATCCTTTACA+TGG + chr8_1:80921901-80921920 Msa1218290:CDS 40.0%
ACATCGATGTTGCCATGTAA+AGG - chr8_1:80921916-80921935 None:intergenic 40.0%
GGAAAATCTCCTTTCTCTCT+TGG + chr8_1:80922012-80922031 Msa1218290:CDS 40.0%
CAAGGTAATCTCCAAAATGG+TGG + chr8_1:80922048-80922067 Msa1218290:CDS 40.0%
!! AATGTTGACTGCCACCATTT+TGG - chr8_1:80922062-80922081 None:intergenic 40.0%
ATCAGGGAAGAGGTTAGTAT+GGG - chr8_1:80922148-80922167 None:intergenic 40.0%
TATCAGGGAAGAGGTTAGTA+TGG - chr8_1:80922149-80922168 None:intergenic 40.0%
ACCTCTTCCCTGATAATTTC+GGG + chr8_1:80922154-80922173 Msa1218290:CDS 40.0%
GTGACAGCAACTATTTACAC+CGG - chr8_1:80922419-80922438 None:intergenic 40.0%
CTGGGAGTAGTGTACTATAA+TGG + chr8_1:80922534-80922553 Msa1218290:three_prime_UTR 40.0%
TTGACCGCATAAAATGCACA+AGG + chr8_1:80922604-80922623 Msa1218290:three_prime_UTR 40.0%
! CATGCCTTGTGCATTTTATG+CGG - chr8_1:80922611-80922630 None:intergenic 40.0%
! TGTTCTTGAAGAGGTATGCT+TGG + chr8_1:80922689-80922708 Msa1218290:three_prime_UTR 40.0%
! GTTCTTGAAGAGGTATGCTT+GGG + chr8_1:80922690-80922709 Msa1218290:three_prime_UTR 40.0%
ATAAATCTGCAAACTCGCGT+AGG + chr8_1:80922743-80922762 Msa1218290:three_prime_UTR 40.0%
GACCGAAGAACATAAACATC+CGG - chr8_1:80922909-80922928 Msa1218300:intron 40.0%
AAACTGATCGGAACCTTCAC+CGG - chr8_1:80918959-80918978 None:intergenic 45.0%
TGAAGGTTCCGATCAGTTTC+CGG + chr8_1:80918960-80918979 Msa1218290:CDS 45.0%
TGATGTGCATATGCCAGACA+TGG + chr8_1:80919651-80919670 Msa1218290:CDS 45.0%
GAAGAACATATGGCAGCATG+TGG + chr8_1:80919924-80919943 Msa1218290:CDS 45.0%
ACATATGGCAGCATGTGGTT+CGG + chr8_1:80919929-80919948 Msa1218290:CDS 45.0%
GGAGAAACTCGAGAAAGAGA+AGG + chr8_1:80920067-80920086 Msa1218290:CDS 45.0%
AGAAGGGATGATGAAGAGGA+AGG + chr8_1:80920084-80920103 Msa1218290:CDS 45.0%
CGTCAACACTAAAGAAGCCT+CGG + chr8_1:80920124-80920143 Msa1218290:CDS 45.0%
GTCAACACTAAAGAAGCCTC+GGG + chr8_1:80920125-80920144 Msa1218290:CDS 45.0%
! TAAAGAAGCCTCGGGTTGTT+TGG + chr8_1:80920133-80920152 Msa1218290:CDS 45.0%
! ACATTTTCTCTAGTGAGCCC+AGG - chr8_1:80920872-80920891 None:intergenic 45.0%
!! ACTTGGGTCCTTTCTGAAGT+AGG - chr8_1:80920929-80920948 None:intergenic 45.0%
TTCTTGTGGTCATCTAACGG+AGG + chr8_1:80920970-80920989 Msa1218290:intron 45.0%
TTGTATCTTCGAAGGCTGAG+TGG + chr8_1:80921037-80921056 Msa1218290:CDS 45.0%
TTCATTTCTCAGCCCACAAG+AGG + chr8_1:80921081-80921100 Msa1218290:CDS 45.0%
TGCCAAATGATGCCTCTTGT+GGG - chr8_1:80921096-80921115 None:intergenic 45.0%
GGCACGATTTCGTCAATGAA+CGG + chr8_1:80921112-80921131 Msa1218290:CDS 45.0%
GGTAGGTCAACTGTGAAATC+AGG + chr8_1:80921211-80921230 Msa1218290:CDS 45.0%
! CTTTGATCCATGAGAGGCAT+TGG - chr8_1:80921241-80921260 None:intergenic 45.0%
CAATGCCTCTCATGGATCAA+AGG + chr8_1:80921239-80921258 Msa1218290:CDS 45.0%
AGGTTCCTTTGATCCATGAG+AGG - chr8_1:80921247-80921266 None:intergenic 45.0%
CCTTCTCCAAATCTCAACCT+TGG - chr8_1:80921286-80921305 None:intergenic 45.0%
CCAAGGTTGAGATTTGGAGA+AGG + chr8_1:80921283-80921302 Msa1218290:CDS 45.0%
TCACGGAGTTCCTACTAACA+TGG + chr8_1:80921354-80921373 Msa1218290:CDS 45.0%
! TGCTTTGGCTCCATGTTAGT+AGG - chr8_1:80921367-80921386 None:intergenic 45.0%
TGCAAATTGGCGAGTTGCTT+TGG - chr8_1:80921382-80921401 None:intergenic 45.0%
CTCGCATATTCATGTTGCCA+AGG - chr8_1:80921423-80921442 None:intergenic 45.0%
ATTTCCCTGTGTAGCAGAAG+CGG - chr8_1:80921449-80921468 None:intergenic 45.0%
! TAGCATTGGACCTCTAGGTT+GGG - chr8_1:80921497-80921516 None:intergenic 45.0%
! TTAGCATTGGACCTCTAGGT+TGG - chr8_1:80921498-80921517 None:intergenic 45.0%
! TCACTTAGCATTGGACCTCT+AGG - chr8_1:80921502-80921521 None:intergenic 45.0%
TCCAAGATTACCGAACCTCT+TGG + chr8_1:80921540-80921559 Msa1218290:CDS 45.0%
CCAAGATTACCGAACCTCTT+GGG + chr8_1:80921541-80921560 Msa1218290:CDS 45.0%
CAAGATTACCGAACCTCTTG+GGG + chr8_1:80921542-80921561 Msa1218290:CDS 45.0%
! TTCGGCTTGAAATGAGCCTT+TGG - chr8_1:80921761-80921780 None:intergenic 45.0%
TCGGGAATTAAAGGATCAGC+TGG + chr8_1:80921787-80921806 Msa1218290:CDS 45.0%
AACTGAACCAGCAGAAATCC+CGG + chr8_1:80921836-80921855 Msa1218290:CDS 45.0%
!! AGAAGCATCTCTGCTATGTC+CGG - chr8_1:80921986-80922005 None:intergenic 45.0%
AGCAGAGATGCTTCTTTGCT+TGG + chr8_1:80921991-80922010 Msa1218290:CDS 45.0%
TCTCCTTTCTCTCTTGGAGA+AGG + chr8_1:80922018-80922037 Msa1218290:CDS 45.0%
AAGCCTTCTCCAAGAGAGAA+AGG - chr8_1:80922024-80922043 None:intergenic 45.0%
TTTCTCTCTTGGAGAAGGCT+TGG + chr8_1:80922023-80922042 Msa1218290:CDS 45.0%
CATCCTGCCCGAAATTATCA+GGG - chr8_1:80922164-80922183 None:intergenic 45.0%
TCATCCTGCCCGAAATTATC+AGG - chr8_1:80922165-80922184 None:intergenic 45.0%
!! CATGAGTGCACTTCTGAAAC+AGG + chr8_1:80922188-80922207 Msa1218290:CDS 45.0%
TTGTGTTTCTTGCAGCAGGA+AGG + chr8_1:80922297-80922316 Msa1218290:intron 45.0%
! TGACTTTGACGGGTATTCTC+TGG + chr8_1:80922341-80922360 Msa1218290:CDS 45.0%
! TGAAGAGGTATGCTTGGGTT+AGG + chr8_1:80922695-80922714 Msa1218290:three_prime_UTR 45.0%
! GAAGAGGTATGCTTGGGTTA+GGG + chr8_1:80922696-80922715 Msa1218290:three_prime_UTR 45.0%
TAAACCCGCCGGAAACTGAT+CGG - chr8_1:80918971-80918990 None:intergenic 50.0%
GGGTTTACGAGTTCTCGTTG+TGG + chr8_1:80918984-80919003 Msa1218290:CDS 50.0%
GTGCATATGCCAGACATGGA+TGG + chr8_1:80919655-80919674 Msa1218290:CDS 50.0%
GTAGTGATGTCTGCCGATGA+TGG + chr8_1:80919826-80919845 Msa1218290:intron 50.0%
GTGGAAAGATACGGAGCAGT+CGG + chr8_1:80919966-80919985 Msa1218290:CDS 50.0%
TGGAAAGATACGGAGCAGTC+GGG + chr8_1:80919967-80919986 Msa1218290:CDS 50.0%
CGAGCTCCATCAACAGTTTG+TGG + chr8_1:80920161-80920180 Msa1218290:CDS 50.0%
CAGCAGCCACAAACTGTTGA+TGG - chr8_1:80920170-80920189 None:intergenic 50.0%
TCAACAGTTTGTGGCTGCTG+TGG + chr8_1:80920170-80920189 Msa1218290:CDS 50.0%
GACAGTATGTATCCTCACCC+AGG + chr8_1:80920207-80920226 Msa1218290:intron 50.0%
!! CTTTTGAAGAGTCCTGGGTG+AGG - chr8_1:80920222-80920241 None:intergenic 50.0%
AAATGTTGCCAGCCACTTGC+AGG + chr8_1:80920886-80920905 Msa1218290:CDS 50.0%
GTATGATACCTGCAAGTGGC+TGG - chr8_1:80920897-80920916 None:intergenic 50.0%
!! AGCCCACAAGAGGCATCATT+TGG + chr8_1:80921091-80921110 Msa1218290:CDS 50.0%
GTGCCAAATGATGCCTCTTG+TGG - chr8_1:80921097-80921116 None:intergenic 50.0%
CAGCTGCTGCAAGAGTTTGA+AGG - chr8_1:80921144-80921163 None:intergenic 50.0%
CTTCAAACTCTTGCAGCAGC+TGG + chr8_1:80921142-80921161 Msa1218290:CDS 50.0%
! AAGTCCTGCTGCTTGAAGAG+TGG - chr8_1:80921191-80921210 None:intergenic 50.0%
ACTCTTCAAGCAGCAGGACT+TGG + chr8_1:80921190-80921209 Msa1218290:CDS 50.0%
! TTCAAGCAGCAGGACTTGGT+AGG + chr8_1:80921194-80921213 Msa1218290:CDS 50.0%
AGGCTTACCAATGCCTCTCA+TGG + chr8_1:80921231-80921250 Msa1218290:CDS 50.0%
TGCTGCAGACTGGTGCAAAT+TGG - chr8_1:80921395-80921414 None:intergenic 50.0%
TTTCCCTGTGTAGCAGAAGC+GGG - chr8_1:80921448-80921467 None:intergenic 50.0%
ATGGCACAATCCCAACCTAG+AGG + chr8_1:80921484-80921503 Msa1218290:CDS 50.0%
! CCCAAGAGGTTCGGTAATCT+TGG - chr8_1:80921544-80921563 None:intergenic 50.0%
GGGCAGTCTACTGTGTCAAA+TGG + chr8_1:80921562-80921581 Msa1218290:CDS 50.0%
AACGAAGAGCTCTGTGGAAC+AGG - chr8_1:80921652-80921671 None:intergenic 50.0%
! TACCTGGAGTGCTTCCAAGA+GGG - chr8_1:80921723-80921742 None:intergenic 50.0%
! ATACCTGGAGTGCTTCCAAG+AGG - chr8_1:80921724-80921743 None:intergenic 50.0%
ACTGAACCAGCAGAAATCCC+GGG + chr8_1:80921837-80921856 Msa1218290:CDS 50.0%
GATTGGGGGATGACAAACCA+AGG + chr8_1:80921859-80921878 Msa1218290:CDS 50.0%
CAACATCGATGTCTCTCCGT+CGG + chr8_1:80921924-80921943 Msa1218290:CDS 50.0%
!!! TCCGTCGGTTTTAGTCCATC+AGG + chr8_1:80921939-80921958 Msa1218290:CDS 50.0%
!! CCCTGATGGACTAAAACCGA+CGG - chr8_1:80921943-80921962 None:intergenic 50.0%
!!! CCGTCGGTTTTAGTCCATCA+GGG + chr8_1:80921940-80921959 Msa1218290:CDS 50.0%
GAGCAGAAGAAAAGCCCTGA+TGG - chr8_1:80921957-80921976 None:intergenic 50.0%
CTTGGAGAAGGCTTGGAACA+AGG + chr8_1:80922030-80922049 Msa1218290:CDS 50.0%
GCCCGAAATTATCAGGGAAG+AGG - chr8_1:80922158-80922177 None:intergenic 50.0%
CTTCCCTGATAATTTCGGGC+AGG + chr8_1:80922158-80922177 Msa1218290:CDS 50.0%
! TTCTTGCAGCAGGAAGGCAT+TGG + chr8_1:80922303-80922322 Msa1218290:intron 50.0%
AGGGCAGAATTGCAGAAGCA+AGG + chr8_1:80922715-80922734 Msa1218290:three_prime_UTR 50.0%
AGGTTCCGATCAGTTTCCGG+CGG + chr8_1:80918963-80918982 Msa1218290:CDS 55.0%
ACGAGAACTCGTAAACCCGC+CGG - chr8_1:80918982-80919001 None:intergenic 55.0%
TCGACAGACCAAACAACCCG+AGG - chr8_1:80920144-80920163 None:intergenic 55.0%
GTGGCTGCTGTGGATCAACT+AGG + chr8_1:80920180-80920199 Msa1218290:CDS 55.0%
GAGTGGCTAGACTTTGCGCT+GGG - chr8_1:80921174-80921193 None:intergenic 55.0%
AGAGTGGCTAGACTTTGCGC+TGG - chr8_1:80921175-80921194 None:intergenic 55.0%
CTAGCCACTCTTCAAGCAGC+AGG + chr8_1:80921184-80921203 Msa1218290:CDS 55.0%
TTCCCTGTGTAGCAGAAGCG+GGG - chr8_1:80921447-80921466 None:intergenic 55.0%
GTAGACTGCCCCAAGAGGTT+CGG - chr8_1:80921553-80921572 None:intergenic 55.0%
ACACAGTAGACTGCCCCAAG+AGG - chr8_1:80921558-80921577 None:intergenic 55.0%
!! TTCCCTCTTGGAAGCACTCC+AGG + chr8_1:80921718-80921737 Msa1218290:CDS 55.0%
ACCAGCAGAAATCCCGGGAT+TGG + chr8_1:80921842-80921861 Msa1218290:CDS 55.0%
CCAGCAGAAATCCCGGGATT+GGG + chr8_1:80921843-80921862 Msa1218290:CDS 55.0%
CAGCAGAAATCCCGGGATTG+GGG + chr8_1:80921844-80921863 Msa1218290:CDS 55.0%
AGCAGAAATCCCGGGATTGG+GGG + chr8_1:80921845-80921864 Msa1218290:CDS 55.0%
GTTTGTCATCCCCCAATCCC+GGG - chr8_1:80921857-80921876 None:intergenic 55.0%
GGTTTGTCATCCCCCAATCC+CGG - chr8_1:80921858-80921877 None:intergenic 55.0%
TTAGTATGGGAGCTCGCGTC+AGG - chr8_1:80922135-80922154 None:intergenic 55.0%
GGCGAGAGTCTCTTCTAGAC+AGG - chr8_1:80922375-80922394 None:intergenic 55.0%
GGTTCCGATCAGTTTCCGGC+GGG + chr8_1:80918964-80918983 Msa1218290:CDS 60.0%
!! CAGTCGGGTAGTGCTGACGA+GGG + chr8_1:80919982-80920001 Msa1218290:CDS 60.0%
CTAGACTTTGCGCTGGGAGC+TGG - chr8_1:80921168-80921187 None:intergenic 60.0%
CAAGGGACTGTGCTGCAGAC+TGG - chr8_1:80921405-80921424 None:intergenic 60.0%
CAGTCTGCAGCACAGTCCCT+TGG + chr8_1:80921403-80921422 Msa1218290:CDS 60.0%
AGTCCCCGCTTCTGCTACAC+AGG + chr8_1:80921441-80921460 Msa1218290:CDS 60.0%
GTCCCCGCTTCTGCTACACA+GGG + chr8_1:80921442-80921461 Msa1218290:CDS 60.0%
CCCAATCCCGGGATTTCTGC+TGG - chr8_1:80921846-80921865 None:intergenic 60.0%
!! GCAGTCGGGTAGTGCTGACG+AGG + chr8_1:80919981-80920000 Msa1218290:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 80918708 80923108 80918708 ID=Msa1218290;Name=Msa1218290
chr8_1 mRNA 80918708 80923108 80918708 ID=Msa1218290-mRNA-1;Parent=Msa1218290;Name=Msa1218290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=178|1|1|1|1|1|6|728|680
chr8_1 exon 80918708 80919066 80918708 ID=Msa1218290-mRNA-1:exon:28547;Parent=Msa1218290-mRNA-1
chr8_1 exon 80919575 80919727 80919575 ID=Msa1218290-mRNA-1:exon:28548;Parent=Msa1218290-mRNA-1
chr8_1 exon 80919830 80920210 80919830 ID=Msa1218290-mRNA-1:exon:28549;Parent=Msa1218290-mRNA-1
chr8_1 exon 80920831 80920907 80920831 ID=Msa1218290-mRNA-1:exon:28550;Parent=Msa1218290-mRNA-1
chr8_1 exon 80921028 80922209 80921028 ID=Msa1218290-mRNA-1:exon:28551;Parent=Msa1218290-mRNA-1
chr8_1 exon 80922312 80923108 80922312 ID=Msa1218290-mRNA-1:exon:28552;Parent=Msa1218290-mRNA-1
chr8_1 five_prime_UTR 80918708 80918885 80918708 ID=Msa1218290-mRNA-1:five_prime_utr;Parent=Msa1218290-mRNA-1
chr8_1 CDS 80918886 80919066 80918886 ID=Msa1218290-mRNA-1:cds;Parent=Msa1218290-mRNA-1
chr8_1 CDS 80919575 80919727 80919575 ID=Msa1218290-mRNA-1:cds;Parent=Msa1218290-mRNA-1
chr8_1 CDS 80919830 80920210 80919830 ID=Msa1218290-mRNA-1:cds;Parent=Msa1218290-mRNA-1
chr8_1 CDS 80920831 80920907 80920831 ID=Msa1218290-mRNA-1:cds;Parent=Msa1218290-mRNA-1
chr8_1 CDS 80921028 80922209 80921028 ID=Msa1218290-mRNA-1:cds;Parent=Msa1218290-mRNA-1
chr8_1 CDS 80922312 80922380 80922312 ID=Msa1218290-mRNA-1:cds;Parent=Msa1218290-mRNA-1
chr8_1 three_prime_UTR 80922381 80923108 80922381 ID=Msa1218290-mRNA-1:three_prime_utr;Parent=Msa1218290-mRNA-1
Gene Sequence

>Msa1218290

ATGATGAATCTAAGCAACAACGGAAAAGGATCAATATCAACTGTTACTTCAACTGCTACTACTATGAAATCCGGTGAAGGTTCCGATCAGTTTCCGGCGGGTTTACGAGTTCTCGTTGTGGATGATGATCCCACGTGTCTTATGATTCTTGAGAAGATGTTGCGCACATGTCTTTATGAAGTTACGAAATGCAATCGAGCTGAGACTGCGCTTTCGCTACTCAGAGAGAACAAGAATGGATTTGATATTGTTATTAGTGATGTGCATATGCCAGACATGGATGGATTTAAACTCTTAGAACATATTGGATTGGAAATGGACCTTCCAGTTATTATGATGTCTGCCGATGATGGTAAAAGTGTTGTTATGAAGGGTGTAACACATGGTGCTTGTGATTACTTGATTAAACCTGTTCGTATTGAGGCTTTGAAGAACATATGGCAGCATGTGGTTCGGAAGAAAAAGAACGAGTGGAAAGATACGGAGCAGTCGGGTAGTGCTGACGAGGGAGATCGACATCCAAAAGCATCTGATGATGCTGATTATTCGTCTTCTGCTAATGAAGGAAATTGGAGAAACTCGAGAAAGAGAAGGGATGATGAAGAGGAAGGTGACGATAGAGATGACTCGTCAACACTAAAGAAGCCTCGGGTTGTTTGGTCTGTCGAGCTCCATCAACAGTTTGTGGCTGCTGTGGATCAACTAGGAATTGACAAGGCTGTTCCCAAAAAAATTCTGGAATTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTTGCCAGCCACTTGCAGAAATATCGATTGTATCTTCGAAGGCTGAGTGGAGTTTCTCAGCACCAGAATAATTCATTTCTCAGCCCACAAGAGGCATCATTTGGCACGATTTCGTCAATGAACGGACTTGACCTTCAAACTCTTGCAGCAGCTGGCCAGCTCCCAGCGCAAAGTCTAGCCACTCTTCAAGCAGCAGGACTTGGTAGGTCAACTGTGAAATCAGGCTTACCAATGCCTCTCATGGATCAAAGGAACCTTTTCAGTTTTGAAAACCCAAGGTTGAGATTTGGAGAAGGGCAACAACAACTTTTGAATGGTAGTAATAATAAACCAACAAATCTTCTTCACGGAGTTCCTACTAACATGGAGCCAAAGCAACTCGCCAATTTGCACCAGTCTGCAGCACAGTCCCTTGGCAACATGAATATGCGAGTCCCCGCTTCTGCTACACAGGGAAATCCCTTATTGATGCAGATGGCACAATCCCAACCTAGAGGTCCAATGCTAAGTGAAAATACTGGTTCTCATGTTCCAAGATTACCGAACCTCTTGGGGCAGTCTACTGTGTCAAATGGAATTTCTGACGGTCTTATGGGGAGAAATAACATGGCTAGTAGCAGTAGAGTGCCTTCGTTTAATCCTGTTCCACAGAGCTCTTCGTTTTTGAATTTTCCCATGAATCAAAGCACTGAAATGTCTGTTAGTAATTTCCCTCTTGGAAGCACTCCAGGTATATCTAGTATCACAACCAAAGGCTCATTTCAAGCCGAAGTTAATTCGGGAATTAAAGGATCAGCTGGATTTCCAAGTTATGATATTTTTAACGAACTGAACCAGCAGAAATCCCGGGATTGGGGGATGACAAACCAAGGTCTAACATATGATTCCTCATCGCATGCAAATCCTTTACATGGCAACATCGATGTCTCTCCGTCGGTTTTAGTCCATCAGGGCTTTTCTTCTGCTCAACAAACCGGACATAGCAGAGATGCTTCTTTGCTTGGAAAATCTCCTTTCTCTCTTGGAGAAGGCTTGGAACAAGGTAATCTCCAAAATGGTGGCAGTCAACATTTCAATCCTCTTTATGTTGAAAATTCAACAAGGGTTAAGGCTGAAAGAGTTCCTGACGCGAGCTCCCATACTAACCTCTTCCCTGATAATTTCGGGCAGGATGATCTCATGAGTGCACTTCTGAAACAGCAGGAAGGCATTGGACGCGAGAATGAGTTTGACTTTGACGGGTATTCTCTGGACAACATTCCTGTCTAG
Protein sequence

>Msa1218290

MMNLSNNGKGSISTVTSTATTMKSGEGSDQFPAGLRVLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLLRENKNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEWKDTEQSGSADEGDRHPKASDDADYSSSANEGNWRNSRKRRDDEEEGDDRDDSSTLKKPRVVWSVELHQQFVAAVDQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNSFLSPQEASFGTISSMNGLDLQTLAAAGQLPAQSLATLQAAGLGRSTVKSGLPMPLMDQRNLFSFENPRLRFGEGQQQLLNGSNNKPTNLLHGVPTNMEPKQLANLHQSAAQSLGNMNMRVPASATQGNPLLMQMAQSQPRGPMLSENTGSHVPRLPNLLGQSTVSNGISDGLMGRNNMASSSRVPSFNPVPQSSSFLNFPMNQSTEMSVSNFPLGSTPGISSITTKGSFQAEVNSGIKGSAGFPSYDIFNELNQQKSRDWGMTNQGLTYDSSSHANPLHGNIDVSPSVLVHQGFSSAQQTGHSRDASLLGKSPFSLGEGLEQGNLQNGGSQHFNPLYVENSTRVKAERVPDASSHTNLFPDNFGQDDLMSALLKQQEGIGRENEFDFDGYSLDNIPV*