Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224320 | XP_003610594.2 | 81.818 | 572 | 37 | 3 | 1 | 505 | 1 | 572 | 0.0 | 864 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224320 | sp|Q8GYX3|MP705_ARATH | 44.485 | 544 | 176 | 9 | 26 | 494 | 6 | 498 | 2.75e-118 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094230 | Msa1224320 | 0.981300 | 2.963362e-152 | -8.615850e-47 |
| Msa1115020 | Msa1224320 | 0.825428 | 4.714150e-54 | -8.615850e-47 |
| Msa1224320 | Msa1224340 | 0.800669 | 1.293037e-48 | -8.615850e-47 |
| Msa1224320 | Msa1418000 | 0.949588 | 9.386447e-108 | -8.615850e-47 |
| Msa1224320 | Msa1465270 | 0.888793 | 4.305928e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224320 | MtrunA17_Chr4g0076251 | 81.818 | 572 | 37 | 3 | 1 | 505 | 1 | 572 | 0.0 | 864 |
| Msa1224320 | MtrunA17_Chr2g0290411 | 57.117 | 562 | 150 | 8 | 18 | 504 | 5 | 550 | 0.0 | 560 |
| Msa1224320 | MtrunA17_Chr8g0391771 | 41.869 | 535 | 217 | 11 | 25 | 483 | 56 | 572 | 1.19e-109 | 338 |
| Msa1224320 | MtrunA17_Chr1g0161371 | 41.264 | 538 | 216 | 8 | 25 | 483 | 51 | 567 | 7.54e-107 | 331 |
| Msa1224320 | MtrunA17_Chr8g0344311 | 43.071 | 534 | 210 | 13 | 25 | 483 | 52 | 566 | 3.58e-106 | 329 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224320 | AT4G17220.1 | 44.485 | 544 | 176 | 9 | 26 | 494 | 6 | 498 | 2.79e-119 | 360 |
| Msa1224320 | AT1G68060.1 | 41.636 | 550 | 228 | 12 | 25 | 498 | 65 | 597 | 5.86e-116 | 355 |
| Msa1224320 | AT1G24764.1 | 41.899 | 537 | 216 | 12 | 25 | 483 | 73 | 591 | 1.16e-114 | 352 |
| Msa1224320 | AT1G24764.3 | 42.086 | 537 | 215 | 12 | 25 | 483 | 132 | 650 | 4.14e-113 | 350 |
| Msa1224320 | AT1G14840.1 | 41.527 | 537 | 214 | 10 | 25 | 483 | 48 | 562 | 8.44e-113 | 347 |
| Msa1224320 | AT2G01750.1 | 40.260 | 539 | 217 | 10 | 25 | 483 | 72 | 585 | 3.36e-109 | 338 |
| Msa1224320 | AT2G01750.2 | 40.260 | 539 | 217 | 10 | 25 | 483 | 72 | 585 | 3.45e-109 | 338 |
| Msa1224320 | AT1G14840.2 | 40.727 | 523 | 223 | 11 | 25 | 483 | 48 | 547 | 2.79e-102 | 319 |
| Msa1224320 | AT1G24764.2 | 40.789 | 456 | 174 | 12 | 106 | 483 | 1 | 438 | 4.52e-88 | 279 |
Find 99 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGAGATTTCTCTAAAATTT+TGG | 0.168689 | 8_1:-89118054 | None:intergenic |
| ATATTTGTCTGTTGAAATAA+AGG | 0.235016 | 8_1:-89119251 | None:intergenic |
| GTTTGTACATAATCAAATTC+TGG | 0.253373 | 8_1:-89120427 | None:intergenic |
| ATTTCCCTTTCCCTCACTTT+TGG | 0.259668 | 8_1:-89116204 | None:intergenic |
| TAATTAAAATACCTCTTCTA+TGG | 0.278017 | 8_1:-89117046 | None:intergenic |
| TTTCAACTTCAAGAATCTTT+TGG | 0.283060 | 8_1:-89118079 | None:intergenic |
| TGGACCACCACTTGCTGTTC+GGG | 0.284359 | 8_1:-89119183 | None:intergenic |
| AAAGCTTAGCCAAACTATTC+AGG | 0.293484 | 8_1:+89118100 | Msa1224320:CDS |
| GAACAGAATCGTCATCCTTT+TGG | 0.300614 | 8_1:-89117590 | None:intergenic |
| GCAATTCAGAAACTTGTCTT+TGG | 0.311316 | 8_1:-89118178 | None:intergenic |
| CCTCAAGTTCCTGAATAGTT+TGG | 0.312176 | 8_1:-89118109 | None:intergenic |
| TTCACCATTTGCAATTCTAT+TGG | 0.325874 | 8_1:-89118342 | None:intergenic |
| TTCATAGATAACAGCACTTC+AGG | 0.334892 | 8_1:+89117773 | Msa1224320:intron |
| AGTCATTTGGTTTCTTGCTT+TGG | 0.339262 | 8_1:-89119511 | None:intergenic |
| TTGGACCACCACTTGCTGTT+CGG | 0.348999 | 8_1:-89119184 | None:intergenic |
| TGCAGTGACGATTTGGTGTC+AGG | 0.351949 | 8_1:+89119536 | Msa1224320:CDS |
| GTTCGGGAACTTATGATGTT+AGG | 0.366965 | 8_1:-89119167 | None:intergenic |
| GTTTGTAAATACAAAACATT+TGG | 0.369792 | 8_1:+89120359 | Msa1224320:three_prime_UTR |
| CAACCAAGAGCATCTGCTAT+TGG | 0.377463 | 8_1:+89119224 | Msa1224320:CDS |
| ACATGTTGAAGAAAAGGATA+TGG | 0.378577 | 8_1:+89119351 | Msa1224320:CDS |
| GAGAAATGAAGTCGGTAAAC+TGG | 0.378705 | 8_1:+89117325 | Msa1224320:CDS |
| CCGCAGAAGCAACACTTAGA+AGG | 0.382381 | 8_1:+89117556 | Msa1224320:CDS |
| TCTTCTAGCCATTGCTTGAC+AGG | 0.383618 | 8_1:-89118401 | None:intergenic |
| AAAACAACACAAACACTGTT+GGG | 0.389131 | 8_1:+89119276 | Msa1224320:CDS |
| TAAACAAAGAACCTTTGAAT+TGG | 0.391122 | 8_1:-89116311 | None:intergenic |
| CTTCACTTTCAGCATTGAAC+TGG | 0.402094 | 8_1:-89119448 | None:intergenic |
| TTTCTTCCACTCTACTTCCA+TGG | 0.416424 | 8_1:-89120086 | None:intergenic |
| TATTTGTCTGTTGAAATAAA+GGG | 0.417797 | 8_1:-89119250 | None:intergenic |
| CTTTATTTGTAGATAGCTAA+AGG | 0.421505 | 8_1:+89120308 | Msa1224320:three_prime_UTR |
| CGGAAAACATGTTGAAGAAA+AGG | 0.427179 | 8_1:+89119345 | Msa1224320:CDS |
| CCACTCTACTTCCATGGACT+TGG | 0.429401 | 8_1:-89120080 | None:intergenic |
| GCTAGCAAGGGTAAAAGTTT+CGG | 0.430627 | 8_1:+89118319 | Msa1224320:CDS |
| TCGTCACTGCACGAGTCATT+TGG | 0.432134 | 8_1:-89119524 | None:intergenic |
| GGGGCAATGGCGTTATCAAT+TGG | 0.440234 | 8_1:-89117612 | None:intergenic |
| TGAAAAGGAAAATGAGATAC+AGG | 0.451771 | 8_1:+89119403 | Msa1224320:CDS |
| AGTTGCTGATAGTGGTGAAA+AGG | 0.454137 | 8_1:+89119388 | Msa1224320:CDS |
| ATAGGGTCTGAGAGGACAAC+TGG | 0.454257 | 8_1:-89116261 | None:intergenic |
| GTGAGGTGTGAAAAGCAATA+TGG | 0.458438 | 8_1:+89116228 | Msa1224320:CDS |
| TGACTCGTGCAGTGACGATT+TGG | 0.459803 | 8_1:+89119529 | Msa1224320:CDS |
| AAGCTGAGATTACAATGTAT+AGG | 0.477680 | 8_1:+89117640 | Msa1224320:CDS |
| CACTAGAGAGGGAGCTAGCA+AGG | 0.481581 | 8_1:+89118306 | Msa1224320:CDS |
| AAAAGTGAGGGAAAGGGAAA+TGG | 0.487123 | 8_1:+89116206 | Msa1224320:CDS |
| CTTCCAATAGCAGATGCTCT+TGG | 0.493116 | 8_1:-89119227 | None:intergenic |
| AGAGGATCGTCTTAAGCAAA+AGG | 0.497139 | 8_1:+89117367 | Msa1224320:CDS |
| CCTCTCAGACCCTATGGTGT+TGG | 0.497422 | 8_1:+89116269 | Msa1224320:CDS |
| ATAAGTAAAGTTGCTGATAG+TGG | 0.498402 | 8_1:+89119380 | Msa1224320:CDS |
| AGATGCAGCTGCTAGAGAAA+AGG | 0.499613 | 8_1:+89120117 | Msa1224320:CDS |
| CGATTAATCTCCAACACCAT+AGG | 0.511794 | 8_1:-89116279 | None:intergenic |
| AGTTGTCCTCTCAGACCCTA+TGG | 0.511922 | 8_1:+89116263 | Msa1224320:CDS |
| GACTGAAGCTCTGAAGGATA+AGG | 0.515576 | 8_1:+89117023 | Msa1224320:CDS |
| CGTTTGCATAACCAATTCAA+AGG | 0.519141 | 8_1:+89116300 | Msa1224320:CDS |
| CAATGCCAAAAGTGAGGGAA+AGG | 0.521517 | 8_1:+89116199 | None:intergenic |
| CTCAGCTTGAAGAGGGGCAA+TGG | 0.525958 | 8_1:-89117625 | None:intergenic |
| TAAAATTATATTATACACAT+TGG | 0.526083 | 8_1:+89120589 | Msa1224320:three_prime_UTR |
| TTGTAATCTCAGCTTGAAGA+GGG | 0.530115 | 8_1:-89117632 | None:intergenic |
| AATTGAATACGAGGAACACT+TGG | 0.534757 | 8_1:+89120539 | Msa1224320:three_prime_UTR |
| CCAAACTATTCAGGAACTTG+AGG | 0.536454 | 8_1:+89118109 | Msa1224320:CDS |
| AAGGGTGCATGCAAACCAAA+AGG | 0.538099 | 8_1:+89117575 | Msa1224320:CDS |
| TTTGCAAAGTGCACTAGAGA+AGG | 0.539870 | 8_1:+89117863 | Msa1224320:CDS |
| CCTTCTAAGTGTTGCTTCTG+CGG | 0.541428 | 8_1:-89117556 | None:intergenic |
| CGCAGAAGCAACACTTAGAA+GGG | 0.542238 | 8_1:+89117557 | Msa1224320:CDS |
| GAAACACAGACTCCTCCAAA+AGG | 0.543913 | 8_1:+89120182 | Msa1224320:CDS |
| TCGGCCAATAGAATTGCAAA+TGG | 0.544219 | 8_1:+89118338 | Msa1224320:CDS |
| TGATGCACTGACCAAGTCCA+TGG | 0.550345 | 8_1:+89120069 | Msa1224320:CDS |
| AAACAACACAAACACTGTTG+GGG | 0.563286 | 8_1:+89119277 | Msa1224320:CDS |
| GATTAATCTCCAACACCATA+GGG | 0.563826 | 8_1:-89116278 | None:intergenic |
| AGAAGAGAGAAGGATTATGC+AGG | 0.567503 | 8_1:+89118418 | Msa1224320:CDS |
| AAGGTCGACTGAAGCTCTGA+AGG | 0.573607 | 8_1:+89117017 | Msa1224320:CDS |
| CCTCCCAATGCCAAAAGTGA+GGG | 0.575640 | 8_1:+89116194 | None:intergenic |
| AGCAATGGCTAGAAGAGAGA+AGG | 0.577331 | 8_1:+89118408 | Msa1224320:CDS |
| AATGCCAAAAGTGAGGGAAA+GGG | 0.592729 | 8_1:+89116200 | None:intergenic |
| TCCTCCCAATGCCAAAAGTG+AGG | 0.596299 | 8_1:+89116193 | None:intergenic |
| GAGGAAGTCATCTTAGCTAA+CGG | 0.600860 | 8_1:+89118128 | Msa1224320:CDS |
| GATTACAATGTATAGGAATG+AGG | 0.604046 | 8_1:+89117647 | Msa1224320:CDS |
| AGGTCATGCCTGTCAAGCAA+TGG | 0.604618 | 8_1:+89118393 | Msa1224320:CDS |
| ATGAGAAAAGGACACTAGAG+AGG | 0.607096 | 8_1:+89118294 | Msa1224320:CDS |
| GTATGATAGGCTGCAAAGAG+AGG | 0.608475 | 8_1:+89119565 | Msa1224320:CDS |
| CCAAGTCCATGGAAGTAGAG+TGG | 0.610186 | 8_1:+89120080 | Msa1224320:CDS |
| ACTAGAGAGGGAGCTAGCAA+GGG | 0.615439 | 8_1:+89118307 | Msa1224320:CDS |
| TAAAATGAAGTATACTTCTG+CGG | 0.618529 | 8_1:+89119325 | Msa1224320:CDS |
| CGAGAGACTTAGAGTTACAG+AGG | 0.619933 | 8_1:+89117349 | Msa1224320:CDS |
| AGAGTGAAATCAAAGCACTA+AGG | 0.626155 | 8_1:+89116998 | Msa1224320:CDS |
| GAAGGATAAGGCCATAGAAG+AGG | 0.631116 | 8_1:+89117035 | Msa1224320:CDS |
| ATAAGTTCCCGAACAGCAAG+TGG | 0.632187 | 8_1:+89119176 | Msa1224320:CDS |
| TGGTGAAGCTAATGAGTGGA+AGG | 0.633476 | 8_1:+89118358 | Msa1224320:CDS |
| TGAGGGAAAGGGAAATGGTG+AGG | 0.637716 | 8_1:+89116211 | Msa1224320:CDS |
| AACAACACAAACACTGTTGG+GGG | 0.647416 | 8_1:+89119278 | Msa1224320:CDS |
| ATTGTAATCTCAGCTTGAAG+AGG | 0.647918 | 8_1:-89117633 | None:intergenic |
| AGACGAAAAGAAAAGTGCAA+TGG | 0.651443 | 8_1:+89117521 | Msa1224320:CDS |
| TGAGAAAAGGACACTAGAGA+GGG | 0.660251 | 8_1:+89118295 | Msa1224320:CDS |
| AGTTCCCGAACAGCAAGTGG+TGG | 0.662519 | 8_1:+89119179 | Msa1224320:CDS |
| GTGTGAAAAGCAATATGGAG+AGG | 0.669978 | 8_1:+89116233 | Msa1224320:CDS |
| CCAACACCATAGGGTCTGAG+AGG | 0.675725 | 8_1:-89116269 | None:intergenic |
| TTTCAGCTGAGAAATGAAGT+CGG | 0.679362 | 8_1:+89117317 | Msa1224320:intron |
| GTGGAAGGATGAAAATGACA+AGG | 0.684047 | 8_1:+89118373 | Msa1224320:CDS |
| TGTAATCTCAGCTTGAAGAG+GGG | 0.692586 | 8_1:-89117631 | None:intergenic |
| CAAATGGTGAAGCTAATGAG+TGG | 0.695992 | 8_1:+89118354 | Msa1224320:CDS |
| GGGTCTGAGAGGACAACTGG+AGG | 0.711528 | 8_1:-89116258 | None:intergenic |
| AAGCATTGCTAGATGCAGAG+AGG | 0.719701 | 8_1:+89117838 | Msa1224320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATAAAAAAAAAAAAA+GGG | - | chr8_1:89117972-89117991 | None:intergenic | 0.0% |
| !! | TTTATTATAAAAAAAAAAAA+AGG | - | chr8_1:89117973-89117992 | None:intergenic | 0.0% |
| !!! | TTTTTTTTATAATAAAAAAT+TGG | + | chr8_1:89117977-89117996 | Msa1224320:intron | 0.0% |
| !! | TAATTATACTACAAATTAAT+AGG | - | chr8_1:89117170-89117189 | None:intergenic | 10.0% |
| !! | TAAAATTATATTATACACAT+TGG | + | chr8_1:89120589-89120608 | Msa1224320:three_prime_UTR | 10.0% |
| !!! | TTTAAAACTCTAATAAAGAT+TGG | - | chr8_1:89116797-89116816 | None:intergenic | 15.0% |
| !! | AATGATTACATAAAGTTATA+AGG | - | chr8_1:89116944-89116963 | None:intergenic | 15.0% |
| !!! | TACTTGTATTTTATTAAAGT+AGG | + | chr8_1:89117405-89117424 | Msa1224320:intron | 15.0% |
| !! | AAATAAAACTGTAGTATTTA+AGG | - | chr8_1:89118507-89118526 | None:intergenic | 15.0% |
| !!! | GTTTTATTTTGTTACTTATA+AGG | + | chr8_1:89118518-89118537 | Msa1224320:intron | 15.0% |
| !! | ATATACTGAAATAAATCTTA+AGG | + | chr8_1:89118567-89118586 | Msa1224320:intron | 15.0% |
| !! | TATACTGAAATAAATCTTAA+GGG | + | chr8_1:89118568-89118587 | Msa1224320:intron | 15.0% |
| !!! | ACAATTTTATAACATTGTTA+TGG | - | chr8_1:89120259-89120278 | None:intergenic | 15.0% |
| !! | ATAACTTTATGTAATCATTG+TGG | + | chr8_1:89116945-89116964 | Msa1224320:intron | 20.0% |
| !! | TAATTAAAATACCTCTTCTA+TGG | - | chr8_1:89117049-89117068 | None:intergenic | 20.0% |
| !!! | ATATTGTTATTGTAGTTTTC+AGG | - | chr8_1:89118551-89118570 | None:intergenic | 20.0% |
| !!! | GTTGTTTTTATAAGTTATCT+TGG | + | chr8_1:89118753-89118772 | Msa1224320:intron | 20.0% |
| !! | GTTTGTAGAAATTTCATTTA+GGG | - | chr8_1:89118904-89118923 | None:intergenic | 20.0% |
| !! | AGTTTGTAGAAATTTCATTT+AGG | - | chr8_1:89118905-89118924 | None:intergenic | 20.0% |
| !!! | TCAATTTTCAATGTGTTATT+TGG | + | chr8_1:89119060-89119079 | Msa1224320:intron | 20.0% |
| !! | TATTTGTCTGTTGAAATAAA+GGG | - | chr8_1:89119253-89119272 | None:intergenic | 20.0% |
| !! | ATATTTGTCTGTTGAAATAA+AGG | - | chr8_1:89119254-89119273 | None:intergenic | 20.0% |
| !!! | GAAGTATACTTCATTTTAAT+AGG | - | chr8_1:89119323-89119342 | None:intergenic | 20.0% |
| !!! | AACAATTGTTTTGATTTCTT+CGG | - | chr8_1:89119474-89119493 | None:intergenic | 20.0% |
| !!! | TTTATGAAATGTGTGTTTTA+TGG | - | chr8_1:89119957-89119976 | None:intergenic | 20.0% |
| !! | ATGTAGTTCAATATGATATA+TGG | - | chr8_1:89120020-89120039 | None:intergenic | 20.0% |
| !! | AATGTTATAAAATTGTTGCA+GGG | + | chr8_1:89120263-89120282 | Msa1224320:intron | 20.0% |
| !! | GTTTGTAAATACAAAACATT+TGG | + | chr8_1:89120359-89120378 | Msa1224320:three_prime_UTR | 20.0% |
| !!! | ACTCTTTTATACAAATTTAC+AGG | - | chr8_1:89120471-89120490 | None:intergenic | 20.0% |
| ! | TAAACAAAGAACCTTTGAAT+TGG | - | chr8_1:89116314-89116333 | None:intergenic | 25.0% |
| ! | ATATCCATTCAATACTAGTT+CGG | - | chr8_1:89116686-89116705 | None:intergenic | 25.0% |
| !!! | CTGGTCAATACTTTTTTTTT+GGG | - | chr8_1:89116712-89116731 | None:intergenic | 25.0% |
| !!! | TCTGGTCAATACTTTTTTTT+TGG | - | chr8_1:89116713-89116732 | None:intergenic | 25.0% |
| ! | AATCTATCTATACAAACACA+TGG | + | chr8_1:89117069-89117088 | Msa1224320:intron | 25.0% |
| ! | AACATGCATGACATAATTAA+TGG | - | chr8_1:89117125-89117144 | None:intergenic | 25.0% |
| !!! | AATAATACGGTTCTAAATTG+AGG | - | chr8_1:89117264-89117283 | None:intergenic | 25.0% |
| ! | CCATATTAGACTGAATAATA+CGG | - | chr8_1:89117277-89117296 | None:intergenic | 25.0% |
| !! | TTCTGCATAAGAATAGATTT+TGG | - | chr8_1:89117480-89117499 | None:intergenic | 25.0% |
| !! | TTTCAACTTCAAGAATCTTT+TGG | - | chr8_1:89118082-89118101 | None:intergenic | 25.0% |
| !! | TGATATATTGACTGTTTGTT+TGG | + | chr8_1:89118226-89118245 | Msa1224320:intron | 25.0% |
| !! | GGTTTTGCATATAAATTTTC+AGG | + | chr8_1:89118271-89118290 | Msa1224320:intron | 25.0% |
| !!! | TAAATTTTCAGGATGAGAAA+AGG | + | chr8_1:89118282-89118301 | Msa1224320:intron | 25.0% |
| !! | ATAAACTTCAAAGGTTTTCA+TGG | - | chr8_1:89118467-89118486 | None:intergenic | 25.0% |
| !! | ACTAGGATTTTCCATATTTA+AGG | + | chr8_1:89118621-89118640 | Msa1224320:intron | 25.0% |
| ! | TCAAACATGATAATTCAAAC+AGG | + | chr8_1:89118878-89118897 | Msa1224320:intron | 25.0% |
| !! | AATTGATTTAGATGCTTACA+TGG | - | chr8_1:89119046-89119065 | None:intergenic | 25.0% |
| ! | AAAAGTGAGACTAAAAACAA+TGG | + | chr8_1:89119103-89119122 | Msa1224320:CDS | 25.0% |
| ! | TAAAATGAAGTATACTTCTG+CGG | + | chr8_1:89119325-89119344 | Msa1224320:CDS | 25.0% |
| ! | AGCTAAAGATGAAGAAATTA+TGG | + | chr8_1:89119634-89119653 | Msa1224320:intron | 25.0% |
| ! | ATGTCATCTATATAAAGTGT+CGG | - | chr8_1:89119702-89119721 | None:intergenic | 25.0% |
| ! | CAATGTTATAAAATTGTTGC+AGG | + | chr8_1:89120262-89120281 | Msa1224320:intron | 25.0% |
| !! | CTTTATTTGTAGATAGCTAA+AGG | + | chr8_1:89120308-89120327 | Msa1224320:three_prime_UTR | 25.0% |
| ! | GTTTGTACATAATCAAATTC+TGG | - | chr8_1:89120430-89120449 | None:intergenic | 25.0% |
| ! | ATTCAATTTCGTGAAAAACT+TGG | - | chr8_1:89120527-89120546 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGTTTCCATCATG+AGG | + | chr8_1:89116359-89116378 | Msa1224320:intron | 30.0% |
| ! | AGTTTGATTTAGTTTCCATC+TGG | + | chr8_1:89116389-89116408 | Msa1224320:intron | 30.0% |
| GAAGTCTTTCATATCACATA+CGG | - | chr8_1:89116848-89116867 | None:intergenic | 30.0% | |
| TTGTGTTCAACTTACACTTA+TGG | - | chr8_1:89116887-89116906 | None:intergenic | 30.0% | |
| AAATGAACTATTCAAGTCAG+TGG | + | chr8_1:89116906-89116925 | Msa1224320:intron | 30.0% | |
| ! | ATAAGCAGCTTTATCCATTA+GGG | + | chr8_1:89117098-89117117 | Msa1224320:intron | 30.0% |
| ACATAATTAATGGTCCCTAA+TGG | - | chr8_1:89117115-89117134 | None:intergenic | 30.0% | |
| CCGTATTATTCAGTCTAATA+TGG | + | chr8_1:89117274-89117293 | Msa1224320:intron | 30.0% | |
| ! | GAGAGAAAAACTTGCATTTT+AGG | - | chr8_1:89117454-89117473 | None:intergenic | 30.0% |
| AAGCTGAGATTACAATGTAT+AGG | + | chr8_1:89117640-89117659 | Msa1224320:CDS | 30.0% | |
| GATTACAATGTATAGGAATG+AGG | + | chr8_1:89117647-89117666 | Msa1224320:CDS | 30.0% | |
| AAATACTACCATTTCCAACA+AGG | + | chr8_1:89117681-89117700 | Msa1224320:intron | 30.0% | |
| AAATGATTCCTTGTTGGAAA+TGG | - | chr8_1:89117692-89117711 | None:intergenic | 30.0% | |
| TTTGCAAGGATAGATCAAAA+TGG | + | chr8_1:89117709-89117728 | Msa1224320:intron | 30.0% | |
| TGTTTGTGGTAGTTGTAAAT+TGG | - | chr8_1:89118026-89118045 | None:intergenic | 30.0% | |
| AATTTACAACTACCACAAAC+AGG | + | chr8_1:89118025-89118044 | Msa1224320:intron | 30.0% | |
| !!! | GCGAGATTTCTCTAAAATTT+TGG | - | chr8_1:89118057-89118076 | None:intergenic | 30.0% |
| ! | TTTGTTTGGTTGATCTTTTG+TGG | + | chr8_1:89118240-89118259 | Msa1224320:intron | 30.0% |
| TTCACCATTTGCAATTCTAT+TGG | - | chr8_1:89118345-89118364 | None:intergenic | 30.0% | |
| CAGGATGATATAAACTTCAA+AGG | - | chr8_1:89118476-89118495 | None:intergenic | 30.0% | |
| ! | AGGGTAAGTTTAAGTTTAAG+AGG | + | chr8_1:89118587-89118606 | Msa1224320:intron | 30.0% |
| ! | GGGTAAGTTTAAGTTTAAGA+GGG | + | chr8_1:89118588-89118607 | Msa1224320:intron | 30.0% |
| TTGATTGGACTCCTTAAATA+TGG | - | chr8_1:89118635-89118654 | None:intergenic | 30.0% | |
| AATCAGTTGTGAGATTGTTT+GGG | - | chr8_1:89118842-89118861 | None:intergenic | 30.0% | |
| TAATCAGTTGTGAGATTGTT+TGG | - | chr8_1:89118843-89118862 | None:intergenic | 30.0% | |
| !!! | TGTGATGTAGATCTCTTTTT+TGG | - | chr8_1:89119206-89119225 | None:intergenic | 30.0% |
| AAAAACAACACAAACACTGT+TGG | + | chr8_1:89119275-89119294 | Msa1224320:CDS | 30.0% | |
| AAAACAACACAAACACTGTT+GGG | + | chr8_1:89119276-89119295 | Msa1224320:CDS | 30.0% | |
| ACATGTTGAAGAAAAGGATA+TGG | + | chr8_1:89119351-89119370 | Msa1224320:CDS | 30.0% | |
| ATAAGTAAAGTTGCTGATAG+TGG | + | chr8_1:89119380-89119399 | Msa1224320:CDS | 30.0% | |
| TGAAAAGGAAAATGAGATAC+AGG | + | chr8_1:89119403-89119422 | Msa1224320:CDS | 30.0% | |
| !!! | TGTCAGGTTTTTTGTATGAT+AGG | + | chr8_1:89119552-89119571 | Msa1224320:CDS | 30.0% |
| AAAGAGAGGTCATTAAATTG+AGG | + | chr8_1:89119579-89119598 | Msa1224320:intron | 30.0% | |
| AAATTATTACCAGTGTCTTC+AGG | + | chr8_1:89119811-89119830 | Msa1224320:intron | 30.0% | |
| ATGTTTCAAAGTCTACAAGT+AGG | + | chr8_1:89119879-89119898 | Msa1224320:intron | 30.0% | |
| GTTCAATATGATATATGGAG+AGG | - | chr8_1:89120015-89120034 | None:intergenic | 30.0% | |
| ! | ATAATTTTCCACTGCCAAAA+AGG | + | chr8_1:89120400-89120419 | Msa1224320:three_prime_UTR | 30.0% |
| ! | TTTTCACGAAATTGAATACG+AGG | + | chr8_1:89120530-89120549 | Msa1224320:three_prime_UTR | 30.0% |
| GATTAATCTCCAACACCATA+GGG | - | chr8_1:89116281-89116300 | None:intergenic | 35.0% | |
| CGTTTGCATAACCAATTCAA+AGG | + | chr8_1:89116300-89116319 | Msa1224320:CDS | 35.0% | |
| AAACTCAATACTCCTCATGA+TGG | - | chr8_1:89116374-89116393 | None:intergenic | 35.0% | |
| TACTAGTTCGGCATAAAACA+AGG | - | chr8_1:89116674-89116693 | None:intergenic | 35.0% | |
| ! | TATGCCGAACTAGTATTGAA+TGG | + | chr8_1:89116679-89116698 | Msa1224320:intron | 35.0% |
| TTATGGTGACTTCTTGGATA+AGG | - | chr8_1:89116870-89116889 | None:intergenic | 35.0% | |
| TTACACTTATGGTGACTTCT+TGG | - | chr8_1:89116876-89116895 | None:intergenic | 35.0% | |
| CATTGTGGCAGAAAAAGTTA+AGG | + | chr8_1:89116960-89116979 | Msa1224320:intron | 35.0% | |
| ! | AGAGTGAAATCAAAGCACTA+AGG | + | chr8_1:89116998-89117017 | Msa1224320:CDS | 35.0% |
| ! | CATAAGCAGCTTTATCCATT+AGG | + | chr8_1:89117097-89117116 | Msa1224320:intron | 35.0% |
| !! | TTCCGCATCGTTCTAAATTT+TGG | + | chr8_1:89117213-89117232 | Msa1224320:intron | 35.0% |
| ! | GACCAAAATTTAGAACGATG+CGG | - | chr8_1:89117218-89117237 | None:intergenic | 35.0% |
| CTTCATTTCTCAGCTGAAAA+TGG | - | chr8_1:89117316-89117335 | None:intergenic | 35.0% | |
| TTTCAGCTGAGAAATGAAGT+CGG | + | chr8_1:89117317-89117336 | Msa1224320:intron | 35.0% | |
| ! | AAGCAAAAGGTACACTGATT+TGG | + | chr8_1:89117380-89117399 | Msa1224320:intron | 35.0% |
| ! | GGTTCTAGCAATCTTCAATA+TGG | - | chr8_1:89117433-89117452 | None:intergenic | 35.0% |
| ! | AGACGAAAAGAAAAGTGCAA+TGG | + | chr8_1:89117521-89117540 | Msa1224320:CDS | 35.0% |
| TTGTAATCTCAGCTTGAAGA+GGG | - | chr8_1:89117635-89117654 | None:intergenic | 35.0% | |
| ATTGTAATCTCAGCTTGAAG+AGG | - | chr8_1:89117636-89117655 | None:intergenic | 35.0% | |
| TTCATAGATAACAGCACTTC+AGG | + | chr8_1:89117773-89117792 | Msa1224320:intron | 35.0% | |
| ! | CAACTTCAAGAATCTTTTGG+CGG | - | chr8_1:89118079-89118098 | None:intergenic | 35.0% |
| AAAGCTTAGCCAAACTATTC+AGG | + | chr8_1:89118100-89118119 | Msa1224320:CDS | 35.0% | |
| GCAATTCAGAAACTTGTCTT+TGG | - | chr8_1:89118181-89118200 | None:intergenic | 35.0% | |
| ! | TGATCTTTTGTGGTAACTTG+TGG | + | chr8_1:89118250-89118269 | Msa1224320:intron | 35.0% |
| ! | AGTATTTAAGGCATGAAAGC+AGG | - | chr8_1:89118495-89118514 | None:intergenic | 35.0% |
| AAATGTAGACAGAGATGCAA+AGG | + | chr8_1:89118938-89118957 | Msa1224320:intron | 35.0% | |
| !! | TGTTATTTGGTGTTCACTTC+AGG | + | chr8_1:89119073-89119092 | Msa1224320:intron | 35.0% |
| AGTGAGACTAAAAACAATGG+AGG | + | chr8_1:89119106-89119125 | Msa1224320:CDS | 35.0% | |
| AGACTAAAAACAATGGAGGA+AGG | + | chr8_1:89119110-89119129 | Msa1224320:CDS | 35.0% | |
| AAACAACACAAACACTGTTG+GGG | + | chr8_1:89119277-89119296 | Msa1224320:CDS | 35.0% | |
| ! | TGTTGGGGGAAATTTAAAAC+TGG | + | chr8_1:89119292-89119311 | Msa1224320:CDS | 35.0% |
| CGGAAAACATGTTGAAGAAA+AGG | + | chr8_1:89119345-89119364 | Msa1224320:CDS | 35.0% | |
| ! | AGTCATTTGGTTTCTTGCTT+TGG | - | chr8_1:89119514-89119533 | None:intergenic | 35.0% |
| ATTGAATGTAACCATGTGTC+AGG | - | chr8_1:89119776-89119795 | None:intergenic | 35.0% | |
| ! | GAGTTCGTTACTGTAGTTTT+AGG | + | chr8_1:89119930-89119949 | Msa1224320:intron | 35.0% |
| !!! | CAAATTCTGGAACTCCTTTT+TGG | - | chr8_1:89120417-89120436 | None:intergenic | 35.0% |
| AATTGAATACGAGGAACACT+TGG | + | chr8_1:89120539-89120558 | Msa1224320:three_prime_UTR | 35.0% | |
| ! | ATTTCCCTTTCCCTCACTTT+TGG | - | chr8_1:89116207-89116226 | None:intergenic | 40.0% |
| AAAAGTGAGGGAAAGGGAAA+TGG | + | chr8_1:89116206-89116225 | Msa1224320:CDS | 40.0% | |
| GTGAGGTGTGAAAAGCAATA+TGG | + | chr8_1:89116228-89116247 | Msa1224320:CDS | 40.0% | |
| GTGTGAAAAGCAATATGGAG+AGG | + | chr8_1:89116233-89116252 | Msa1224320:CDS | 40.0% | |
| CGATTAATCTCCAACACCAT+AGG | - | chr8_1:89116282-89116301 | None:intergenic | 40.0% | |
| TGAGAATCAAACTGACCAGA+TGG | - | chr8_1:89116407-89116426 | None:intergenic | 40.0% | |
| TCATGACTGAGACAATGATC+TGG | - | chr8_1:89116731-89116750 | None:intergenic | 40.0% | |
| CTGCTCACAAGTAGAAAGTT+TGG | - | chr8_1:89116769-89116788 | None:intergenic | 40.0% | |
| GTCTTTCATATCACATACGG+TGG | - | chr8_1:89116845-89116864 | None:intergenic | 40.0% | |
| !! | ACGGTTCTAAATTGAGGTTG+CGG | - | chr8_1:89117258-89117277 | None:intergenic | 40.0% |
| CATTTCTCAGCTGAAAATGG+TGG | - | chr8_1:89117313-89117332 | None:intergenic | 40.0% | |
| GAGAAATGAAGTCGGTAAAC+TGG | + | chr8_1:89117325-89117344 | Msa1224320:CDS | 40.0% | |
| AGAGGATCGTCTTAAGCAAA+AGG | + | chr8_1:89117367-89117386 | Msa1224320:CDS | 40.0% | |
| ! | GAACAGAATCGTCATCCTTT+TGG | - | chr8_1:89117593-89117612 | None:intergenic | 40.0% |
| TGTAATCTCAGCTTGAAGAG+GGG | - | chr8_1:89117634-89117653 | None:intergenic | 40.0% | |
| CCTTGCAAATGATTCCTTGT+TGG | - | chr8_1:89117698-89117717 | None:intergenic | 40.0% | |
| CCAACAAGGAATCATTTGCA+AGG | + | chr8_1:89117695-89117714 | Msa1224320:intron | 40.0% | |
| TTTGCAAAGTGCACTAGAGA+AGG | + | chr8_1:89117863-89117882 | Msa1224320:CDS | 40.0% | |
| GAGACAGATTGATATCTACC+AGG | + | chr8_1:89117929-89117948 | Msa1224320:intron | 40.0% | |
| GAAACGCAAAAAATCTTGCC+TGG | - | chr8_1:89117950-89117969 | None:intergenic | 40.0% | |
| TTACAACTACCACAAACAGG+AGG | + | chr8_1:89118028-89118047 | Msa1224320:intron | 40.0% | |
| CCTCAAGTTCCTGAATAGTT+TGG | - | chr8_1:89118112-89118131 | None:intergenic | 40.0% | |
| CCAAACTATTCAGGAACTTG+AGG | + | chr8_1:89118109-89118128 | Msa1224320:CDS | 40.0% | |
| GAGGAAGTCATCTTAGCTAA+CGG | + | chr8_1:89118128-89118147 | Msa1224320:CDS | 40.0% | |
| ATGAGAAAAGGACACTAGAG+AGG | + | chr8_1:89118294-89118313 | Msa1224320:CDS | 40.0% | |
| TGAGAAAAGGACACTAGAGA+GGG | + | chr8_1:89118295-89118314 | Msa1224320:CDS | 40.0% | |
| GCTAGCAAGGGTAAAAGTTT+CGG | + | chr8_1:89118319-89118338 | Msa1224320:CDS | 40.0% | |
| TCGGCCAATAGAATTGCAAA+TGG | + | chr8_1:89118338-89118357 | Msa1224320:CDS | 40.0% | |
| CAAATGGTGAAGCTAATGAG+TGG | + | chr8_1:89118354-89118373 | Msa1224320:CDS | 40.0% | |
| GTGGAAGGATGAAAATGACA+AGG | + | chr8_1:89118373-89118392 | Msa1224320:CDS | 40.0% | |
| AGAAGAGAGAAGGATTATGC+AGG | + | chr8_1:89118418-89118437 | Msa1224320:CDS | 40.0% | |
| ! | AAGAGGGTGTAATGCAAACT+AGG | + | chr8_1:89118604-89118623 | Msa1224320:intron | 40.0% |
| GTTGAACAGCTTCTCTTGAT+TGG | - | chr8_1:89118650-89118669 | None:intergenic | 40.0% | |
| CATCTCTGTCTACATTTGCA+AGG | - | chr8_1:89118935-89118954 | None:intergenic | 40.0% | |
| TATATCAGAGAGAACAGCCA+AGG | + | chr8_1:89118978-89118997 | Msa1224320:intron | 40.0% | |
| GTTCGGGAACTTATGATGTT+AGG | - | chr8_1:89119170-89119189 | None:intergenic | 40.0% | |
| AACAACACAAACACTGTTGG+GGG | + | chr8_1:89119278-89119297 | Msa1224320:CDS | 40.0% | |
| !! | AGTTGCTGATAGTGGTGAAA+AGG | + | chr8_1:89119388-89119407 | Msa1224320:CDS | 40.0% |
| ! | CTTCACTTTCAGCATTGAAC+TGG | - | chr8_1:89119451-89119470 | None:intergenic | 40.0% |
| AGCTTGCAAACTACTGTCTT+TGG | - | chr8_1:89119618-89119637 | None:intergenic | 40.0% | |
| ATACATAGCTAGTGAAAGCG+GGG | - | chr8_1:89119677-89119696 | None:intergenic | 40.0% | |
| GATACATAGCTAGTGAAAGC+GGG | - | chr8_1:89119678-89119697 | None:intergenic | 40.0% | |
| CGATACATAGCTAGTGAAAG+CGG | - | chr8_1:89119679-89119698 | None:intergenic | 40.0% | |
| GTCAGTATCAGAAACCAACA+TGG | + | chr8_1:89119746-89119765 | Msa1224320:intron | 40.0% | |
| TTTCTTCCACTCTACTTCCA+TGG | - | chr8_1:89120089-89120108 | None:intergenic | 40.0% | |
| ! | TATCAGCCACACTAACCTTT+TGG | - | chr8_1:89120200-89120219 | None:intergenic | 40.0% |
| !! | GACTGAAGCTCTGAAGGATA+AGG | + | chr8_1:89117023-89117042 | Msa1224320:CDS | 45.0% |
| GAAGGATAAGGCCATAGAAG+AGG | + | chr8_1:89117035-89117054 | Msa1224320:CDS | 45.0% | |
| TTGGTCCACAACTGCAATTG+TGG | + | chr8_1:89117232-89117251 | Msa1224320:intron | 45.0% | |
| CGAGAGACTTAGAGTTACAG+AGG | + | chr8_1:89117349-89117368 | Msa1224320:CDS | 45.0% | |
| !! | CCTTCTAAGTGTTGCTTCTG+CGG | - | chr8_1:89117559-89117578 | None:intergenic | 45.0% |
| CGCAGAAGCAACACTTAGAA+GGG | + | chr8_1:89117557-89117576 | Msa1224320:CDS | 45.0% | |
| ! | AAGGGTGCATGCAAACCAAA+AGG | + | chr8_1:89117575-89117594 | Msa1224320:CDS | 45.0% |
| ! | AAGCATTGCTAGATGCAGAG+AGG | + | chr8_1:89117838-89117857 | Msa1224320:CDS | 45.0% |
| ! | TTTTGGTCTCCTCCTGTTTG+TGG | - | chr8_1:89118040-89118059 | None:intergenic | 45.0% |
| TGGTGAAGCTAATGAGTGGA+AGG | + | chr8_1:89118358-89118377 | Msa1224320:CDS | 45.0% | |
| TCTTCTAGCCATTGCTTGAC+AGG | - | chr8_1:89118404-89118423 | None:intergenic | 45.0% | |
| AGCAATGGCTAGAAGAGAGA+AGG | + | chr8_1:89118408-89118427 | Msa1224320:CDS | 45.0% | |
| ATAAGTTCCCGAACAGCAAG+TGG | + | chr8_1:89119176-89119195 | Msa1224320:CDS | 45.0% | |
| !! | CAACCAAGAGCATCTGCTAT+TGG | + | chr8_1:89119224-89119243 | Msa1224320:CDS | 45.0% |
| CTTCCAATAGCAGATGCTCT+TGG | - | chr8_1:89119230-89119249 | None:intergenic | 45.0% | |
| GTATGATAGGCTGCAAAGAG+AGG | + | chr8_1:89119565-89119584 | Msa1224320:CDS | 45.0% | |
| GAATGTAACCATGTGTCAGG+AGG | - | chr8_1:89119773-89119792 | None:intergenic | 45.0% | |
| TGACACTAACCTGAAGACAC+TGG | - | chr8_1:89119823-89119842 | None:intergenic | 45.0% | |
| GTTAGTGTCAGTGTCGTGTT+TGG | + | chr8_1:89119833-89119852 | Msa1224320:intron | 45.0% | |
| AGATGCAGCTGCTAGAGAAA+AGG | + | chr8_1:89120117-89120136 | Msa1224320:CDS | 45.0% | |
| GAAACACAGACTCCTCCAAA+AGG | + | chr8_1:89120182-89120201 | Msa1224320:CDS | 45.0% | |
| ACTCCTCCAAAAGGTTAGTG+TGG | + | chr8_1:89120191-89120210 | Msa1224320:intron | 45.0% | |
| !! | TTATATTCATTATAATTTAT+AGG | - | chr8_1:89116479-89116498 | None:intergenic | 5.0% |
| TGAGGGAAAGGGAAATGGTG+AGG | + | chr8_1:89116211-89116230 | Msa1224320:CDS | 50.0% | |
| ATAGGGTCTGAGAGGACAAC+TGG | - | chr8_1:89116264-89116283 | None:intergenic | 50.0% | |
| AGTTGTCCTCTCAGACCCTA+TGG | + | chr8_1:89116263-89116282 | Msa1224320:CDS | 50.0% | |
| ! | AAGGTCGACTGAAGCTCTGA+AGG | + | chr8_1:89117017-89117036 | Msa1224320:CDS | 50.0% |
| CCGCAGAAGCAACACTTAGA+AGG | + | chr8_1:89117556-89117575 | Msa1224320:CDS | 50.0% | |
| GGGGCAATGGCGTTATCAAT+TGG | - | chr8_1:89117615-89117634 | None:intergenic | 50.0% | |
| ACTAGAGAGGGAGCTAGCAA+GGG | + | chr8_1:89118307-89118326 | Msa1224320:CDS | 50.0% | |
| AGGTCATGCCTGTCAAGCAA+TGG | + | chr8_1:89118393-89118412 | Msa1224320:CDS | 50.0% | |
| CTTCAGCTGTGATTCTGCCT+TGG | - | chr8_1:89118998-89119017 | None:intergenic | 50.0% | |
| CAAGGCAGAATCACAGCTGA+AGG | + | chr8_1:89118996-89119015 | Msa1224320:intron | 50.0% | |
| !! | TTGGACCACCACTTGCTGTT+CGG | - | chr8_1:89119187-89119206 | None:intergenic | 50.0% |
| TCGTCACTGCACGAGTCATT+TGG | - | chr8_1:89119527-89119546 | None:intergenic | 50.0% | |
| TGACTCGTGCAGTGACGATT+TGG | + | chr8_1:89119529-89119548 | Msa1224320:CDS | 50.0% | |
| !! | TGCAGTGACGATTTGGTGTC+AGG | + | chr8_1:89119536-89119555 | Msa1224320:CDS | 50.0% |
| ACATGTCCCGTGTCAATGTC+TGG | + | chr8_1:89119718-89119737 | Msa1224320:intron | 50.0% | |
| ACACGTGCCAGACATTGACA+CGG | - | chr8_1:89119728-89119747 | None:intergenic | 50.0% | |
| ATGTGTCAGGAGGACCATGT+TGG | - | chr8_1:89119763-89119782 | None:intergenic | 50.0% | |
| AACATGGTCCTCCTGACACA+TGG | + | chr8_1:89119762-89119781 | Msa1224320:intron | 50.0% | |
| ! | TGATGCACTGACCAAGTCCA+TGG | + | chr8_1:89120069-89120088 | Msa1224320:CDS | 50.0% |
| CCACTCTACTTCCATGGACT+TGG | - | chr8_1:89120083-89120102 | None:intergenic | 50.0% | |
| CCAAGTCCATGGAAGTAGAG+TGG | + | chr8_1:89120080-89120099 | Msa1224320:CDS | 50.0% | |
| ! | CAGCCACACTAACCTTTTGG+AGG | - | chr8_1:89120197-89120216 | None:intergenic | 50.0% |
| !! | CTGGAACTCCTTTTTGGCAG+TGG | - | chr8_1:89120411-89120430 | None:intergenic | 50.0% |
| CCAACACCATAGGGTCTGAG+AGG | - | chr8_1:89116272-89116291 | None:intergenic | 55.0% | |
| CCTCTCAGACCCTATGGTGT+TGG | + | chr8_1:89116269-89116288 | Msa1224320:CDS | 55.0% | |
| TGCGGCCACAATTGCAGTTG+TGG | - | chr8_1:89117240-89117259 | None:intergenic | 55.0% | |
| CTCAGCTTGAAGAGGGGCAA+TGG | - | chr8_1:89117628-89117647 | None:intergenic | 55.0% | |
| CACTAGAGAGGGAGCTAGCA+AGG | + | chr8_1:89118306-89118325 | Msa1224320:CDS | 55.0% | |
| AGTTCCCGAACAGCAAGTGG+TGG | + | chr8_1:89119179-89119198 | Msa1224320:CDS | 55.0% | |
| !! | TGGACCACCACTTGCTGTTC+GGG | - | chr8_1:89119186-89119205 | None:intergenic | 55.0% |
| CACGTGCCAGACATTGACAC+GGG | - | chr8_1:89119727-89119746 | None:intergenic | 55.0% | |
| GGGTCTGAGAGGACAACTGG+AGG | - | chr8_1:89116261-89116280 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 89116201 | 89120640 | 89116201 | ID=Msa1224320;Name=Msa1224320 |
| chr8_1 | mRNA | 89116201 | 89120640 | 89116201 | ID=Msa1224320-mRNA-1;Parent=Msa1224320;Name=Msa1224320-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.66|0.6|1|1|1|10|338|506 |
| chr8_1 | exon | 89116201 | 89116321 | 89116201 | ID=Msa1224320-mRNA-1:exon:32381;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89116971 | 89117056 | 89116971 | ID=Msa1224320-mRNA-1:exon:32382;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89117323 | 89117388 | 89117323 | ID=Msa1224320-mRNA-1:exon:32383;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89117498 | 89117668 | 89117498 | ID=Msa1224320-mRNA-1:exon:32384;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89117780 | 89117902 | 89117780 | ID=Msa1224320-mRNA-1:exon:32385;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89118047 | 89118202 | 89118047 | ID=Msa1224320-mRNA-1:exon:32386;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89118293 | 89118439 | 89118293 | ID=Msa1224320-mRNA-1:exon:32387;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89119095 | 89119586 | 89119095 | ID=Msa1224320-mRNA-1:exon:32388;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89120064 | 89120203 | 89120064 | ID=Msa1224320-mRNA-1:exon:32389;Parent=Msa1224320-mRNA-1 |
| chr8_1 | exon | 89120284 | 89120640 | 89120284 | ID=Msa1224320-mRNA-1:exon:32390;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89116201 | 89116321 | 89116201 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89116971 | 89117056 | 89116971 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89117323 | 89117388 | 89117323 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89117498 | 89117668 | 89117498 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89117780 | 89117902 | 89117780 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89118047 | 89118202 | 89118047 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89118293 | 89118439 | 89118293 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89119095 | 89119586 | 89119095 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89120064 | 89120203 | 89120064 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | CDS | 89120284 | 89120302 | 89120284 | ID=Msa1224320-mRNA-1:cds;Parent=Msa1224320-mRNA-1 |
| chr8_1 | three_prime_UTR | 89120303 | 89120640 | 89120303 | ID=Msa1224320-mRNA-1:three_prime_utr;Parent=Msa1224320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
