Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418000 | sp|Q8GYX3|MP705_ARATH | 53.125 | 544 | 196 | 6 | 26 | 561 | 6 | 498 | 1.59e-169 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418000 | A0A396IHM9 | 92.832 | 572 | 41 | 0 | 1 | 572 | 1 | 572 | 0.0 | 1027 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094230 | Msa1418000 | 0.939572 | 1.015165e-99 | -8.615850e-47 |
| Msa1418000 | Msa1465270 | 0.866375 | 2.986534e-65 | -8.615850e-47 |
| Msa1115020 | Msa1418000 | 0.807559 | 4.765600e-50 | -8.615850e-47 |
| Msa1224320 | Msa1418000 | 0.949588 | 9.386447e-108 | -8.615850e-47 |
| Msa1224340 | Msa1418000 | 0.805918 | 1.058626e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418000 | MtrunA17_Chr4g0076251 | 92.832 | 572 | 41 | 0 | 1 | 572 | 1 | 572 | 0.0 | 1027 |
| Msa1418000 | MtrunA17_Chr2g0290411 | 67.082 | 562 | 161 | 4 | 18 | 571 | 5 | 550 | 0.0 | 692 |
| Msa1418000 | MtrunA17_Chr8g0391771 | 49.159 | 535 | 245 | 8 | 25 | 550 | 56 | 572 | 1.45e-151 | 449 |
| Msa1418000 | MtrunA17_Chr1g0161371 | 48.684 | 532 | 252 | 5 | 25 | 550 | 51 | 567 | 1.11e-148 | 441 |
| Msa1418000 | MtrunA17_Chr8g0344311 | 50.187 | 534 | 239 | 10 | 25 | 550 | 52 | 566 | 4.90e-147 | 437 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1418000 | AT4G17220.1 | 53.125 | 544 | 196 | 6 | 26 | 561 | 6 | 498 | 1.62e-170 | 494 |
| Msa1418000 | AT1G68060.1 | 48.727 | 550 | 256 | 9 | 25 | 565 | 65 | 597 | 4.12e-158 | 466 |
| Msa1418000 | AT1G24764.1 | 48.790 | 537 | 246 | 9 | 25 | 550 | 73 | 591 | 5.08e-156 | 461 |
| Msa1418000 | AT1G14840.1 | 48.790 | 537 | 242 | 7 | 25 | 550 | 48 | 562 | 6.13e-155 | 457 |
| Msa1418000 | AT1G24764.3 | 48.790 | 537 | 246 | 9 | 25 | 550 | 132 | 650 | 2.07e-154 | 459 |
| Msa1418000 | AT2G01750.1 | 47.495 | 539 | 245 | 7 | 25 | 550 | 72 | 585 | 2.69e-151 | 449 |
| Msa1418000 | AT2G01750.2 | 47.495 | 539 | 245 | 7 | 25 | 550 | 72 | 585 | 2.90e-151 | 449 |
| Msa1418000 | AT1G14840.2 | 46.555 | 537 | 239 | 8 | 25 | 550 | 48 | 547 | 6.77e-140 | 418 |
| Msa1418000 | AT1G24764.2 | 48.904 | 456 | 204 | 9 | 106 | 550 | 1 | 438 | 1.32e-129 | 388 |
Find 107 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGAGATTTCTCTAAAATTT+TGG | 0.168689 | tig0024533:+47335 | None:intergenic |
| ATATTTGTCTGTTGAAATAA+AGG | 0.235016 | tig0024533:+46138 | None:intergenic |
| GTTTGTACATAATCAAATTC+TGG | 0.253373 | tig0024533:+44965 | None:intergenic |
| ATTTCCCTTTCCCTCACTTT+TGG | 0.259668 | tig0024533:+49183 | None:intergenic |
| AGCTTGCAAACTACTGTCTT+TGG | 0.271121 | tig0024533:+45774 | None:intergenic |
| TAATTAAAATACCTCTTCTA+TGG | 0.278017 | tig0024533:+48342 | None:intergenic |
| TTTCAACTTCAAGAATCTTT+TGG | 0.283060 | tig0024533:+47310 | None:intergenic |
| TGGACCACCACTTGCTGTTC+GGG | 0.284359 | tig0024533:+46206 | None:intergenic |
| AAAGCTTAGCCAAACTATTC+AGG | 0.293484 | tig0024533:-47289 | Msa1418000:CDS |
| GAACAGAATCGTCATCCTTT+TGG | 0.300614 | tig0024533:+47798 | None:intergenic |
| GCAATTCAGAAACTTGTCTT+TGG | 0.311316 | tig0024533:+47211 | None:intergenic |
| CCTCAAGTTCCTGAATAGTT+TGG | 0.312176 | tig0024533:+47280 | None:intergenic |
| AGCTAAAGATGAAGAAATTA+TGG | 0.313202 | tig0024533:-45755 | Msa1418000:intron |
| TTCACCATTTGCAATTCTAT+TGG | 0.325874 | tig0024533:+47047 | None:intergenic |
| TTCATAGATAACAGCACTTC+AGG | 0.334892 | tig0024533:-47615 | Msa1418000:intron |
| AGTCATTTGGTTTCTTGCTT+TGG | 0.339262 | tig0024533:+45878 | None:intergenic |
| TTGGACCACCACTTGCTGTT+CGG | 0.348999 | tig0024533:+46205 | None:intergenic |
| TGCAGTGACGATTTGGTGTC+AGG | 0.351949 | tig0024533:-45853 | Msa1418000:CDS |
| GTTCGGGAACTTATGATGTT+AGG | 0.366965 | tig0024533:+46222 | None:intergenic |
| GTTTGTAAATACAAAACATT+TGG | 0.369792 | tig0024533:-45033 | Msa1418000:three_prime_UTR |
| CAACCAAGAGCATCTGCTAT+TGG | 0.377463 | tig0024533:-46165 | Msa1418000:CDS |
| ACATGTTGAAGAAAAGGATA+TGG | 0.378577 | tig0024533:-46038 | Msa1418000:CDS |
| GAGAAATGAAGTCGGTAAAC+TGG | 0.378705 | tig0024533:-48063 | Msa1418000:CDS |
| CCGCAGAAGCAACACTTAGA+AGG | 0.382381 | tig0024533:-47832 | Msa1418000:CDS |
| TCTTCTAGCCATTGCTTGAC+AGG | 0.383618 | tig0024533:+46988 | None:intergenic |
| AAAACAACACAAACACTGTT+GGG | 0.389131 | tig0024533:-46113 | Msa1418000:CDS |
| TAAACAAAGAACCTTTGAAT+TGG | 0.391122 | tig0024533:+49076 | None:intergenic |
| CTTCACTTTCAGCATTGAAC+TGG | 0.402094 | tig0024533:+45941 | None:intergenic |
| TTTCTTCCACTCTACTTCCA+TGG | 0.416424 | tig0024533:+45306 | None:intergenic |
| TATTTGTCTGTTGAAATAAA+GGG | 0.417797 | tig0024533:+46139 | None:intergenic |
| CTTTATTTGTAGATAGCTAA+AGG | 0.421505 | tig0024533:-45084 | Msa1418000:three_prime_UTR |
| CGGAAAACATGTTGAAGAAA+AGG | 0.427179 | tig0024533:-46044 | Msa1418000:CDS |
| CCACTCTACTTCCATGGACT+TGG | 0.429401 | tig0024533:+45312 | None:intergenic |
| GCTAGCAAGGGTAAAAGTTT+CGG | 0.430627 | tig0024533:-47070 | Msa1418000:CDS |
| TCGTCACTGCACGAGTCATT+TGG | 0.432134 | tig0024533:+45865 | None:intergenic |
| GGGGCAATGGCGTTATCAAT+TGG | 0.440234 | tig0024533:+47776 | None:intergenic |
| TGAAAAGGAAAATGAGATAC+AGG | 0.451771 | tig0024533:-45986 | Msa1418000:CDS |
| AGTTGCTGATAGTGGTGAAA+AGG | 0.454137 | tig0024533:-46001 | Msa1418000:CDS |
| ATAGGGTCTGAGAGGACAAC+TGG | 0.454257 | tig0024533:+49126 | None:intergenic |
| GTGAGGTGTGAAAAGCAATA+TGG | 0.458438 | tig0024533:-49159 | Msa1418000:CDS |
| TGACTCGTGCAGTGACGATT+TGG | 0.459803 | tig0024533:-45860 | Msa1418000:CDS |
| AAGCTGAGATTACAATGTAT+AGG | 0.477680 | tig0024533:-47748 | Msa1418000:CDS |
| CTTCAGCTGTGATTCTGCCT+TGG | 0.478370 | tig0024533:+46394 | None:intergenic |
| CACTAGAGAGGGAGCTAGCA+AGG | 0.481581 | tig0024533:-47083 | Msa1418000:CDS |
| AAAAGTGAGGGAAAGGGAAA+TGG | 0.487123 | tig0024533:-49181 | Msa1418000:CDS |
| CTTCCAATAGCAGATGCTCT+TGG | 0.493116 | tig0024533:+46162 | None:intergenic |
| AGAGGATCGTCTTAAGCAAA+AGG | 0.497139 | tig0024533:-48021 | Msa1418000:intron |
| CCTCTCAGACCCTATGGTGT+TGG | 0.497422 | tig0024533:-49118 | Msa1418000:CDS |
| ATAAGTAAAGTTGCTGATAG+TGG | 0.498402 | tig0024533:-46009 | Msa1418000:CDS |
| AGATGCAGCTGCTAGAGAAA+AGG | 0.499613 | tig0024533:-45275 | Msa1418000:CDS |
| CGATTAATCTCCAACACCAT+AGG | 0.511794 | tig0024533:+49108 | None:intergenic |
| AGTTGTCCTCTCAGACCCTA+TGG | 0.511922 | tig0024533:-49124 | Msa1418000:CDS |
| GACTGAAGCTCTGAAGGATA+AGG | 0.515576 | tig0024533:-48365 | Msa1418000:CDS |
| CGTTTGCATAACCAATTCAA+AGG | 0.519141 | tig0024533:-49087 | Msa1418000:intron |
| CAATGCCAAAAGTGAGGGAA+AGG | 0.521517 | tig0024533:-49188 | Msa1418000:CDS |
| CTCAGCTTGAAGAGGGGCAA+TGG | 0.525958 | tig0024533:+47763 | None:intergenic |
| TAAAATTATATTATACACAT+TGG | 0.526083 | tig0024533:-44803 | Msa1418000:three_prime_UTR |
| TTGTAATCTCAGCTTGAAGA+GGG | 0.530115 | tig0024533:+47756 | None:intergenic |
| AATTGAATACGAGGAACACT+TGG | 0.534757 | tig0024533:-44853 | Msa1418000:three_prime_UTR |
| CCAAACTATTCAGGAACTTG+AGG | 0.536454 | tig0024533:-47280 | Msa1418000:CDS |
| AAGGGTGCATGCAAACCAAA+AGG | 0.538099 | tig0024533:-47813 | Msa1418000:CDS |
| TTTGCAAAGTGCACTAGAGA+AGG | 0.539870 | tig0024533:-47525 | Msa1418000:CDS |
| CCTTCTAAGTGTTGCTTCTG+CGG | 0.541428 | tig0024533:+47832 | None:intergenic |
| CGCAGAAGCAACACTTAGAA+GGG | 0.542238 | tig0024533:-47831 | Msa1418000:CDS |
| GAAACACAGACTCCTCCAAA+AGG | 0.543913 | tig0024533:-45210 | Msa1418000:intron |
| TCGGCCAATAGAATTGCAAA+TGG | 0.544219 | tig0024533:-47051 | Msa1418000:CDS |
| TGATGCACTGACCAAGTCCA+TGG | 0.550345 | tig0024533:-45323 | Msa1418000:CDS |
| AAAGAGAGGTCATTAAATTG+AGG | 0.563049 | tig0024533:-45810 | Msa1418000:CDS |
| AAACAACACAAACACTGTTG+GGG | 0.563286 | tig0024533:-46112 | Msa1418000:CDS |
| GATTAATCTCCAACACCATA+GGG | 0.563826 | tig0024533:+49109 | None:intergenic |
| AGAAGAGAGAAGGATTATGC+AGG | 0.567503 | tig0024533:-46971 | Msa1418000:intron |
| AAGGTCGACTGAAGCTCTGA+AGG | 0.573607 | tig0024533:-48371 | Msa1418000:CDS |
| CCTCCCAATGCCAAAAGTGA+GGG | 0.575640 | tig0024533:-49193 | None:intergenic |
| AGCAATGGCTAGAAGAGAGA+AGG | 0.577331 | tig0024533:-46981 | Msa1418000:CDS |
| CAAGGCAGAATCACAGCTGA+AGG | 0.578308 | tig0024533:-46393 | Msa1418000:intron |
| AATGCCAAAAGTGAGGGAAA+GGG | 0.592729 | tig0024533:-49187 | Msa1418000:CDS |
| TCCTCCCAATGCCAAAAGTG+AGG | 0.596299 | tig0024533:-49194 | None:intergenic |
| AAATGTAGACAGAGATGCAA+AGG | 0.598221 | tig0024533:-46451 | Msa1418000:intron |
| GAGGAAGTCATCTTAGCTAA+CGG | 0.600860 | tig0024533:-47261 | Msa1418000:CDS |
| GATTACAATGTATAGGAATG+AGG | 0.604046 | tig0024533:-47741 | Msa1418000:intron |
| AGGTCATGCCTGTCAAGCAA+TGG | 0.604618 | tig0024533:-46996 | Msa1418000:CDS |
| ATGAGAAAAGGACACTAGAG+AGG | 0.607096 | tig0024533:-47095 | Msa1418000:CDS |
| GTATGATAGGCTGCAAAGAG+AGG | 0.608475 | tig0024533:-45824 | Msa1418000:CDS |
| CCAAGTCCATGGAAGTAGAG+TGG | 0.610186 | tig0024533:-45312 | Msa1418000:CDS |
| ACTAGAGAGGGAGCTAGCAA+GGG | 0.615439 | tig0024533:-47082 | Msa1418000:CDS |
| TAAAATGAAGTATACTTCTG+CGG | 0.618529 | tig0024533:-46064 | Msa1418000:CDS |
| CGAGAGACTTAGAGTTACAG+AGG | 0.619933 | tig0024533:-48039 | Msa1418000:CDS |
| AGAGTGAAATCAAAGCACTA+AGG | 0.626155 | tig0024533:-48390 | Msa1418000:CDS |
| GAAGGATAAGGCCATAGAAG+AGG | 0.631116 | tig0024533:-48353 | Msa1418000:intron |
| ATAAGTTCCCGAACAGCAAG+TGG | 0.632187 | tig0024533:-46213 | Msa1418000:CDS |
| TGGTGAAGCTAATGAGTGGA+AGG | 0.633476 | tig0024533:-47031 | Msa1418000:CDS |
| GAGACAGATTGATATCTACC+AGG | 0.637534 | tig0024533:-47459 | Msa1418000:intron |
| TGAGGGAAAGGGAAATGGTG+AGG | 0.637716 | tig0024533:-49176 | Msa1418000:CDS |
| AACAACACAAACACTGTTGG+GGG | 0.647416 | tig0024533:-46111 | Msa1418000:CDS |
| ATTGTAATCTCAGCTTGAAG+AGG | 0.647918 | tig0024533:+47755 | None:intergenic |
| AGACGAAAAGAAAAGTGCAA+TGG | 0.651443 | tig0024533:-47867 | Msa1418000:CDS |
| TGAGAAAAGGACACTAGAGA+GGG | 0.660251 | tig0024533:-47094 | Msa1418000:CDS |
| AGTTCCCGAACAGCAAGTGG+TGG | 0.662519 | tig0024533:-46210 | Msa1418000:CDS |
| GTGTGAAAAGCAATATGGAG+AGG | 0.669978 | tig0024533:-49154 | Msa1418000:CDS |
| TATATCAGAGAGAACAGCCA+AGG | 0.670465 | tig0024533:-46411 | Msa1418000:CDS |
| CCAACACCATAGGGTCTGAG+AGG | 0.675725 | tig0024533:+49118 | None:intergenic |
| TTTCAGCTGAGAAATGAAGT+CGG | 0.679362 | tig0024533:-48071 | Msa1418000:intron |
| GTGGAAGGATGAAAATGACA+AGG | 0.684047 | tig0024533:-47016 | Msa1418000:CDS |
| TGTAATCTCAGCTTGAAGAG+GGG | 0.692586 | tig0024533:+47757 | None:intergenic |
| CAAATGGTGAAGCTAATGAG+TGG | 0.695992 | tig0024533:-47035 | Msa1418000:CDS |
| GGGTCTGAGAGGACAACTGG+AGG | 0.711528 | tig0024533:+49129 | None:intergenic |
| AAGCATTGCTAGATGCAGAG+AGG | 0.719701 | tig0024533:-47550 | Msa1418000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTATAAAAAAAAAAAA+GGG | + | tig0024533:46544-46563 | None:intergenic | 0.0% |
| !!! | TTTTATTATAAAAAAAAAAA+AGG | + | tig0024533:46545-46564 | None:intergenic | 0.0% |
| !!! | TTTTTTTTATAATAAAAAAT+TGG | - | tig0024533:46548-46567 | Msa1418000:intron | 0.0% |
| !! | TAATTATACTACAAATTAAT+AGG | + | tig0024533:45742-45761 | None:intergenic | 10.0% |
| !! | TAAAATTATATTATACACAT+TGG | - | tig0024533:49157-49176 | Msa1418000:CDS | 10.0% |
| !!! | TTTAAAACTCTAATAAAGAT+TGG | + | tig0024533:45369-45388 | None:intergenic | 15.0% |
| !! | AATGATTACATAAAGTTATA+AGG | + | tig0024533:45516-45535 | None:intergenic | 15.0% |
| !!! | TACTTGTATTTTATTAAAGT+AGG | - | tig0024533:45977-45996 | Msa1418000:CDS | 15.0% |
| !! | AAATAAAACTGTAGTATTTA+AGG | + | tig0024533:47078-47097 | None:intergenic | 15.0% |
| !!! | GTTTTATTTTGTTACTTATA+AGG | - | tig0024533:47089-47108 | Msa1418000:CDS | 15.0% |
| !! | ATATACTGAAATAAATCTTA+AGG | - | tig0024533:47138-47157 | Msa1418000:intron | 15.0% |
| !! | TATACTGAAATAAATCTTAA+GGG | - | tig0024533:47139-47158 | Msa1418000:intron | 15.0% |
| !!! | ACAATTTTATAACATTGTTA+TGG | + | tig0024533:48827-48846 | None:intergenic | 15.0% |
| !! | ATAACTTTATGTAATCATTG+TGG | - | tig0024533:45517-45536 | Msa1418000:intron | 20.0% |
| !! | TAATTAAAATACCTCTTCTA+TGG | + | tig0024533:45621-45640 | None:intergenic | 20.0% |
| !!! | ATATTGTTATTGTAGTTTTC+AGG | + | tig0024533:47122-47141 | None:intergenic | 20.0% |
| !!! | GTTGTTTTTATAAGTTATCT+TGG | - | tig0024533:47324-47343 | Msa1418000:CDS | 20.0% |
| !! | GTTTGTAGAAATTTCATTTA+GGG | + | tig0024533:47475-47494 | None:intergenic | 20.0% |
| !! | AGTTTGTAGAAATTTCATTT+AGG | + | tig0024533:47476-47495 | None:intergenic | 20.0% |
| !! | TATTTGTCTGTTGAAATAAA+GGG | + | tig0024533:47824-47843 | None:intergenic | 20.0% |
| !! | ATATTTGTCTGTTGAAATAA+AGG | + | tig0024533:47825-47844 | None:intergenic | 20.0% |
| !!! | GAAGTATACTTCATTTTAAT+AGG | + | tig0024533:47894-47913 | None:intergenic | 20.0% |
| !!! | AACAATTGTTTTGATTTCTT+CGG | + | tig0024533:48045-48064 | None:intergenic | 20.0% |
| !!! | TTTATGAAATGTGTGTTTTA+TGG | + | tig0024533:48525-48544 | None:intergenic | 20.0% |
| !! | ATGTAGTTCAATATGATATA+TGG | + | tig0024533:48588-48607 | None:intergenic | 20.0% |
| !! | AATGTTATAAAATTGTTGCA+GGG | - | tig0024533:48831-48850 | Msa1418000:intron | 20.0% |
| !! | GTTTGTAAATACAAAACATT+TGG | - | tig0024533:48927-48946 | Msa1418000:intron | 20.0% |
| !!! | ACTCTTTTATACAAATTTAC+AGG | + | tig0024533:49039-49058 | None:intergenic | 20.0% |
| ! | TAAACAAAGAACCTTTGAAT+TGG | + | tig0024533:44887-44906 | None:intergenic | 25.0% |
| ! | ATATCCATTCAATACTAGTT+CGG | + | tig0024533:45258-45277 | None:intergenic | 25.0% |
| !!! | CTGGTCAATACTTTTTTTTT+GGG | + | tig0024533:45284-45303 | None:intergenic | 25.0% |
| !!! | TCTGGTCAATACTTTTTTTT+TGG | + | tig0024533:45285-45304 | None:intergenic | 25.0% |
| ! | TTGTGTTCAACTTATACTTA+TGG | + | tig0024533:45459-45478 | None:intergenic | 25.0% |
| ! | AATCTATCTATACAAACACA+TGG | - | tig0024533:45641-45660 | Msa1418000:intron | 25.0% |
| ! | AACATGCATGACATAATTAA+TGG | + | tig0024533:45697-45716 | None:intergenic | 25.0% |
| !!! | AATAATACGGTTCTAAATTG+AGG | + | tig0024533:45836-45855 | None:intergenic | 25.0% |
| ! | CCATATTAGACTGAATAATA+CGG | + | tig0024533:45849-45868 | None:intergenic | 25.0% |
| !! | TTCTGCATAAGAATAGATTT+TGG | + | tig0024533:46052-46071 | None:intergenic | 25.0% |
| !! | TTTCAACTTCAAGAATCTTT+TGG | + | tig0024533:46653-46672 | None:intergenic | 25.0% |
| !! | TGATATATTGACTGTTTGTT+TGG | - | tig0024533:46797-46816 | Msa1418000:intron | 25.0% |
| !! | GGTTTTGCATATAAATTTTC+AGG | - | tig0024533:46842-46861 | Msa1418000:intron | 25.0% |
| !!! | TAAATTTTCAGGATGAGAAA+AGG | - | tig0024533:46853-46872 | Msa1418000:intron | 25.0% |
| !! | ATAAACTTCAAAGGTTTTCA+TGG | + | tig0024533:47038-47057 | None:intergenic | 25.0% |
| !! | ACTAGGATTTTCCATATTTA+AGG | - | tig0024533:47192-47211 | Msa1418000:intron | 25.0% |
| ! | TCAAACATGATAATTCAAAC+AGG | - | tig0024533:47449-47468 | Msa1418000:intron | 25.0% |
| !! | AATTGATTTAGATGCTTACA+TGG | + | tig0024533:47617-47636 | None:intergenic | 25.0% |
| !!! | TCAATTTTCAACGTGTTATT+TGG | - | tig0024533:47631-47650 | Msa1418000:intron | 25.0% |
| ! | AAAAGTGAGACTAAAAACAA+TGG | - | tig0024533:47674-47693 | Msa1418000:intron | 25.0% |
| ! | TAAAATGAAGTATACTTCTG+CGG | - | tig0024533:47896-47915 | Msa1418000:intron | 25.0% |
| ! | AGCTAAAGATGAAGAAATTA+TGG | - | tig0024533:48205-48224 | Msa1418000:intron | 25.0% |
| ! | ATGTCATCTATATAAAGTGT+CGG | + | tig0024533:48273-48292 | None:intergenic | 25.0% |
| ! | CAATGTTATAAAATTGTTGC+AGG | - | tig0024533:48830-48849 | Msa1418000:intron | 25.0% |
| !! | CTTTATTTGTAGATAGCTAA+AGG | - | tig0024533:48876-48895 | Msa1418000:intron | 25.0% |
| ! | GTTTGTACATAATCAAATTC+TGG | + | tig0024533:48998-49017 | None:intergenic | 25.0% |
| ! | ATTCAATTTCGTGAAAAACT+TGG | + | tig0024533:49095-49114 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGTTTCCATCATG+AGG | - | tig0024533:44931-44950 | Msa1418000:three_prime_UTR | 30.0% |
| ! | AGTTTGATTTAGTTTCCATC+TGG | - | tig0024533:44961-44980 | Msa1418000:three_prime_UTR | 30.0% |
| GAAGTCTTTCATATCACATA+CGG | + | tig0024533:45420-45439 | None:intergenic | 30.0% | |
| TTATACTTATGGTGACTTCT+AGG | + | tig0024533:45448-45467 | None:intergenic | 30.0% | |
| AAATGAACTATTCAAGTCAG+TGG | - | tig0024533:45478-45497 | Msa1418000:intron | 30.0% | |
| ! | ATAAGCAGCTTTATCCATTA+GGG | - | tig0024533:45670-45689 | Msa1418000:intron | 30.0% |
| ACATAATTAATGGTCCCTAA+TGG | + | tig0024533:45687-45706 | None:intergenic | 30.0% | |
| CCGTATTATTCAGTCTAATA+TGG | - | tig0024533:45846-45865 | Msa1418000:CDS | 30.0% | |
| ! | GAGAGAAAAACTTGCATTTT+AGG | + | tig0024533:46026-46045 | None:intergenic | 30.0% |
| AAGCTGAGATTACAATGTAT+AGG | - | tig0024533:46212-46231 | Msa1418000:CDS | 30.0% | |
| GATTACAATGTATAGGAATG+AGG | - | tig0024533:46219-46238 | Msa1418000:CDS | 30.0% | |
| AAATACTACCATTTCCAACA+AGG | - | tig0024533:46253-46272 | Msa1418000:CDS | 30.0% | |
| AAATGATTCCTTGTTGGAAA+TGG | + | tig0024533:46264-46283 | None:intergenic | 30.0% | |
| TTTGCAAGGATAGATCAAAA+TGG | - | tig0024533:46281-46300 | Msa1418000:CDS | 30.0% | |
| TGTTTGTGGTAGTTGTAAAT+TGG | + | tig0024533:46597-46616 | None:intergenic | 30.0% | |
| AATTTACAACTACCACAAAC+AGG | - | tig0024533:46596-46615 | Msa1418000:intron | 30.0% | |
| !!! | GCGAGATTTCTCTAAAATTT+TGG | + | tig0024533:46628-46647 | None:intergenic | 30.0% |
| ! | TTTGTTTGGTTGATCTTTTG+TGG | - | tig0024533:46811-46830 | Msa1418000:intron | 30.0% |
| TTCACCATTTGCAATTCTAT+TGG | + | tig0024533:46916-46935 | None:intergenic | 30.0% | |
| CAGGATGATATAAACTTCAA+AGG | + | tig0024533:47047-47066 | None:intergenic | 30.0% | |
| ! | AGGGTAAGTTTAAGTTTAAG+AGG | - | tig0024533:47158-47177 | Msa1418000:intron | 30.0% |
| ! | GGGTAAGTTTAAGTTTAAGA+GGG | - | tig0024533:47159-47178 | Msa1418000:intron | 30.0% |
| TTGATTGGACTCCTTAAATA+TGG | + | tig0024533:47206-47225 | None:intergenic | 30.0% | |
| AATCAGTTGTGAGATTGTTT+GGG | + | tig0024533:47413-47432 | None:intergenic | 30.0% | |
| TAATCAGTTGTGAGATTGTT+TGG | + | tig0024533:47414-47433 | None:intergenic | 30.0% | |
| !!! | TGTGATGTAGATCTCTTTTT+TGG | + | tig0024533:47777-47796 | None:intergenic | 30.0% |
| AAAAACAACACAAACACTGT+TGG | - | tig0024533:47846-47865 | Msa1418000:CDS | 30.0% | |
| AAAACAACACAAACACTGTT+GGG | - | tig0024533:47847-47866 | Msa1418000:CDS | 30.0% | |
| ACATGTTGAAGAAAAGGATA+TGG | - | tig0024533:47922-47941 | Msa1418000:intron | 30.0% | |
| ATAAGTAAAGTTGCTGATAG+TGG | - | tig0024533:47951-47970 | Msa1418000:intron | 30.0% | |
| TGAAAAGGAAAATGAGATAC+AGG | - | tig0024533:47974-47993 | Msa1418000:intron | 30.0% | |
| !!! | TGTCAGGTTTTTTGTATGAT+AGG | - | tig0024533:48123-48142 | Msa1418000:intron | 30.0% |
| AAAGAGAGGTCATTAAATTG+AGG | - | tig0024533:48150-48169 | Msa1418000:intron | 30.0% | |
| AAATTATTACCAGTGTCTTC+AGG | - | tig0024533:48379-48398 | Msa1418000:CDS | 30.0% | |
| ATGTTTCAAAGTCTACAAGT+AGG | - | tig0024533:48447-48466 | Msa1418000:intron | 30.0% | |
| GTTCAATATGATATATGGAG+AGG | + | tig0024533:48583-48602 | None:intergenic | 30.0% | |
| ! | ATAATTTTCCACTGCCAAAA+AGG | - | tig0024533:48968-48987 | Msa1418000:intron | 30.0% |
| ! | TTTTCACGAAATTGAATACG+AGG | - | tig0024533:49098-49117 | Msa1418000:CDS | 30.0% |
| GATTAATCTCCAACACCATA+GGG | + | tig0024533:44854-44873 | None:intergenic | 35.0% | |
| CGTTTGCATAACCAATTCAA+AGG | - | tig0024533:44873-44892 | Msa1418000:three_prime_UTR | 35.0% | |
| AAACTCAATACTCCTCATGA+TGG | + | tig0024533:44946-44965 | None:intergenic | 35.0% | |
| TACTAGTTCGGCATAAAACA+AGG | + | tig0024533:45246-45265 | None:intergenic | 35.0% | |
| ! | TATGCCGAACTAGTATTGAA+TGG | - | tig0024533:45251-45270 | Msa1418000:CDS | 35.0% |
| !! | TTATGGTGACTTCTAGGATA+AGG | + | tig0024533:45442-45461 | None:intergenic | 35.0% |
| CATTGTGGCAGAAAAAGTTA+AGG | - | tig0024533:45532-45551 | Msa1418000:intron | 35.0% | |
| ! | AGAGTGAAATCAAAGCACTA+AGG | - | tig0024533:45570-45589 | Msa1418000:intron | 35.0% |
| ! | CATAAGCAGCTTTATCCATT+AGG | - | tig0024533:45669-45688 | Msa1418000:intron | 35.0% |
| !! | TTCCGCATCGTTCTAAATTT+TGG | - | tig0024533:45785-45804 | Msa1418000:CDS | 35.0% |
| ! | GACCAAAATTTAGAACGATG+CGG | + | tig0024533:45790-45809 | None:intergenic | 35.0% |
| CTTCATTTCTCAGCTGAAAA+TGG | + | tig0024533:45888-45907 | None:intergenic | 35.0% | |
| TTTCAGCTGAGAAATGAAGT+CGG | - | tig0024533:45889-45908 | Msa1418000:CDS | 35.0% | |
| ! | AAGCAAAAGGTACACTGATT+TGG | - | tig0024533:45952-45971 | Msa1418000:CDS | 35.0% |
| ! | GGTTCTAGCAATCTTCAATA+TGG | + | tig0024533:46005-46024 | None:intergenic | 35.0% |
| ! | AGACGAAAAGAAAAGTGCAA+TGG | - | tig0024533:46093-46112 | Msa1418000:CDS | 35.0% |
| TTGTAATCTCAGCTTGAAGA+GGG | + | tig0024533:46207-46226 | None:intergenic | 35.0% | |
| ATTGTAATCTCAGCTTGAAG+AGG | + | tig0024533:46208-46227 | None:intergenic | 35.0% | |
| TTCATAGATAACAGCACTTC+AGG | - | tig0024533:46345-46364 | Msa1418000:intron | 35.0% | |
| ! | CAACTTCAAGAATCTTTTGG+CGG | + | tig0024533:46650-46669 | None:intergenic | 35.0% |
| AAAGCTTAGCCAAACTATTC+AGG | - | tig0024533:46671-46690 | Msa1418000:intron | 35.0% | |
| GCAATTCAGAAACTTGTCTT+TGG | + | tig0024533:46752-46771 | None:intergenic | 35.0% | |
| ! | TGATCTTTTGTGGTAACTTG+TGG | - | tig0024533:46821-46840 | Msa1418000:intron | 35.0% |
| ! | AGTATTTAAGGCATGAAAGC+AGG | + | tig0024533:47066-47085 | None:intergenic | 35.0% |
| AAATGTAGACAGAGATGCAA+AGG | - | tig0024533:47509-47528 | Msa1418000:CDS | 35.0% | |
| !! | TGTTATTTGGTGTTCACTTC+AGG | - | tig0024533:47644-47663 | Msa1418000:intron | 35.0% |
| AGTGAGACTAAAAACAATGG+AGG | - | tig0024533:47677-47696 | Msa1418000:intron | 35.0% | |
| AGACTAAAAACAATGGAGGA+AGG | - | tig0024533:47681-47700 | Msa1418000:intron | 35.0% | |
| AAACAACACAAACACTGTTG+GGG | - | tig0024533:47848-47867 | Msa1418000:CDS | 35.0% | |
| ! | TGTTGGGGGAAATTTAAAAC+TGG | - | tig0024533:47863-47882 | Msa1418000:CDS | 35.0% |
| CGGAAAACATGTTGAAGAAA+AGG | - | tig0024533:47916-47935 | Msa1418000:intron | 35.0% | |
| ! | AGTCATTTGGTTTCTTGCTT+TGG | + | tig0024533:48085-48104 | None:intergenic | 35.0% |
| ATTGAATGTAACCATGTGTC+AGG | + | tig0024533:48344-48363 | None:intergenic | 35.0% | |
| ! | GAGTTCGTTACTGTAGTTTT+AGG | - | tig0024533:48498-48517 | Msa1418000:intron | 35.0% |
| !!! | CAAATTCTGGAACTCCTTTT+TGG | + | tig0024533:48985-49004 | None:intergenic | 35.0% |
| AATTGAATACGAGGAACACT+TGG | - | tig0024533:49107-49126 | Msa1418000:CDS | 35.0% | |
| ! | ATTTCCCTTTCCCTCACTTT+TGG | + | tig0024533:44780-44799 | None:intergenic | 40.0% |
| AAAAGTGAGGGAAAGGGAAA+TGG | - | tig0024533:44779-44798 | Msa1418000:three_prime_UTR | 40.0% | |
| GTGAGGTGTGAAAAGCAATA+TGG | - | tig0024533:44801-44820 | Msa1418000:three_prime_UTR | 40.0% | |
| GTGTGAAAAGCAATATGGAG+AGG | - | tig0024533:44806-44825 | Msa1418000:three_prime_UTR | 40.0% | |
| CGATTAATCTCCAACACCAT+AGG | + | tig0024533:44855-44874 | None:intergenic | 40.0% | |
| TGAGAATCAAACTGACCAGA+TGG | + | tig0024533:44979-44998 | None:intergenic | 40.0% | |
| TCATGACTGAGACAATGATC+TGG | + | tig0024533:45303-45322 | None:intergenic | 40.0% | |
| CTGCTCACAAGTAGAAAGTT+TGG | + | tig0024533:45341-45360 | None:intergenic | 40.0% | |
| GTCTTTCATATCACATACGG+TGG | + | tig0024533:45417-45436 | None:intergenic | 40.0% | |
| !! | ACGGTTCTAAATTGAGGTTG+CGG | + | tig0024533:45830-45849 | None:intergenic | 40.0% |
| CATTTCTCAGCTGAAAATGG+TGG | + | tig0024533:45885-45904 | None:intergenic | 40.0% | |
| GAGAAATGAAGTCGGTAAAC+TGG | - | tig0024533:45897-45916 | Msa1418000:CDS | 40.0% | |
| AGAGGATCGTCTTAAGCAAA+AGG | - | tig0024533:45939-45958 | Msa1418000:CDS | 40.0% | |
| ! | GAACAGAATCGTCATCCTTT+TGG | + | tig0024533:46165-46184 | None:intergenic | 40.0% |
| TGTAATCTCAGCTTGAAGAG+GGG | + | tig0024533:46206-46225 | None:intergenic | 40.0% | |
| CCTTGCAAATGATTCCTTGT+TGG | + | tig0024533:46270-46289 | None:intergenic | 40.0% | |
| CCAACAAGGAATCATTTGCA+AGG | - | tig0024533:46267-46286 | Msa1418000:CDS | 40.0% | |
| TTTGCAAAGTGCACTAGAGA+AGG | - | tig0024533:46435-46454 | Msa1418000:CDS | 40.0% | |
| GAGACAGATTGATATCTACC+AGG | - | tig0024533:46501-46520 | Msa1418000:intron | 40.0% | |
| GAAACGCAAAAAATCTTGCC+TGG | + | tig0024533:46522-46541 | None:intergenic | 40.0% | |
| TTACAACTACCACAAACAGG+AGG | - | tig0024533:46599-46618 | Msa1418000:intron | 40.0% | |
| CCTCAAGTTCCTGAATAGTT+TGG | + | tig0024533:46683-46702 | None:intergenic | 40.0% | |
| CCAAACTATTCAGGAACTTG+AGG | - | tig0024533:46680-46699 | Msa1418000:intron | 40.0% | |
| GAGGAAGTCATCTTAGCTAA+CGG | - | tig0024533:46699-46718 | Msa1418000:intron | 40.0% | |
| ATGAGAAAAGGACACTAGAG+AGG | - | tig0024533:46865-46884 | Msa1418000:intron | 40.0% | |
| TGAGAAAAGGACACTAGAGA+GGG | - | tig0024533:46866-46885 | Msa1418000:intron | 40.0% | |
| GCTAGCAAGGGTAAAAGTTT+CGG | - | tig0024533:46890-46909 | Msa1418000:intron | 40.0% | |
| TCGGCCAATAGAATTGCAAA+TGG | - | tig0024533:46909-46928 | Msa1418000:intron | 40.0% | |
| CAAATGGTGAAGCTAATGAG+TGG | - | tig0024533:46925-46944 | Msa1418000:intron | 40.0% | |
| GTGGAAGGATGAAAATGACA+AGG | - | tig0024533:46944-46963 | Msa1418000:intron | 40.0% | |
| AGAAGAGAGAAGGATTATGC+AGG | - | tig0024533:46989-47008 | Msa1418000:CDS | 40.0% | |
| ! | AAGAGGGTGTAATGCAAACT+AGG | - | tig0024533:47175-47194 | Msa1418000:intron | 40.0% |
| GTTGAACAGCTTCTCTTGAT+TGG | + | tig0024533:47221-47240 | None:intergenic | 40.0% | |
| CATCTCTGTCTACATTTGCA+AGG | + | tig0024533:47506-47525 | None:intergenic | 40.0% | |
| TATATCAGAGAGAACAGCCA+AGG | - | tig0024533:47549-47568 | Msa1418000:CDS | 40.0% | |
| GTTCGGGAACTTATGATGTT+AGG | + | tig0024533:47741-47760 | None:intergenic | 40.0% | |
| AACAACACAAACACTGTTGG+GGG | - | tig0024533:47849-47868 | Msa1418000:CDS | 40.0% | |
| !! | AGTTGCTGATAGTGGTGAAA+AGG | - | tig0024533:47959-47978 | Msa1418000:intron | 40.0% |
| ! | CTTCACTTTCAGCATTGAAC+TGG | + | tig0024533:48022-48041 | None:intergenic | 40.0% |
| AGCTTGCAAACTACTGTCTT+TGG | + | tig0024533:48189-48208 | None:intergenic | 40.0% | |
| ATACATAGCTAGTGAAAGCG+GGG | + | tig0024533:48248-48267 | None:intergenic | 40.0% | |
| GATACATAGCTAGTGAAAGC+GGG | + | tig0024533:48249-48268 | None:intergenic | 40.0% | |
| CGATACATAGCTAGTGAAAG+CGG | + | tig0024533:48250-48269 | None:intergenic | 40.0% | |
| GTCAGTATCAGAAACCAACA+TGG | - | tig0024533:48317-48336 | Msa1418000:intron | 40.0% | |
| TTTCTTCCACTCTACTTCCA+TGG | + | tig0024533:48657-48676 | None:intergenic | 40.0% | |
| ! | TATCAGCCACACTAACCTTT+TGG | + | tig0024533:48768-48787 | None:intergenic | 40.0% |
| !! | GACTGAAGCTCTGAAGGATA+AGG | - | tig0024533:45595-45614 | Msa1418000:intron | 45.0% |
| GAAGGATAAGGCCATAGAAG+AGG | - | tig0024533:45607-45626 | Msa1418000:intron | 45.0% | |
| TTGGTCCACAACTGCAATTG+TGG | - | tig0024533:45804-45823 | Msa1418000:CDS | 45.0% | |
| CGAGAGACTTAGAGTTACAG+AGG | - | tig0024533:45921-45940 | Msa1418000:CDS | 45.0% | |
| !! | CCTTCTAAGTGTTGCTTCTG+CGG | + | tig0024533:46131-46150 | None:intergenic | 45.0% |
| CGCAGAAGCAACACTTAGAA+GGG | - | tig0024533:46129-46148 | Msa1418000:CDS | 45.0% | |
| ! | AAGGGTGCATGCAAACCAAA+AGG | - | tig0024533:46147-46166 | Msa1418000:CDS | 45.0% |
| ! | AAGCATTGCTAGATGCAGAG+AGG | - | tig0024533:46410-46429 | Msa1418000:CDS | 45.0% |
| ! | TTTTGGTCTCCTCCTGTTTG+TGG | + | tig0024533:46611-46630 | None:intergenic | 45.0% |
| TGGTGAAGCTAATGAGTGGA+AGG | - | tig0024533:46929-46948 | Msa1418000:intron | 45.0% | |
| TCTTCTAGCCATTGCTTGAC+AGG | + | tig0024533:46975-46994 | None:intergenic | 45.0% | |
| AGCAATGGCTAGAAGAGAGA+AGG | - | tig0024533:46979-46998 | Msa1418000:CDS | 45.0% | |
| ATAAGTTCCCGAACAGCAAG+TGG | - | tig0024533:47747-47766 | Msa1418000:CDS | 45.0% | |
| !! | CAACCAAGAGCATCTGCTAT+TGG | - | tig0024533:47795-47814 | Msa1418000:CDS | 45.0% |
| CTTCCAATAGCAGATGCTCT+TGG | + | tig0024533:47801-47820 | None:intergenic | 45.0% | |
| GTATGATAGGCTGCAAAGAG+AGG | - | tig0024533:48136-48155 | Msa1418000:intron | 45.0% | |
| TGACACTAACCTGAAGACAC+TGG | + | tig0024533:48391-48410 | None:intergenic | 45.0% | |
| GTTAGTGTCAGTGTCGTGTT+TGG | - | tig0024533:48401-48420 | Msa1418000:CDS | 45.0% | |
| AGATGCAGCTGCTAGAGAAA+AGG | - | tig0024533:48685-48704 | Msa1418000:intron | 45.0% | |
| GAAACACAGACTCCTCCAAA+AGG | - | tig0024533:48750-48769 | Msa1418000:intron | 45.0% | |
| ACTCCTCCAAAAGGTTAGTG+TGG | - | tig0024533:48759-48778 | Msa1418000:intron | 45.0% | |
| !! | TTATATTCATTATAATTTAT+AGG | + | tig0024533:45051-45070 | None:intergenic | 5.0% |
| TGAGGGAAAGGGAAATGGTG+AGG | - | tig0024533:44784-44803 | Msa1418000:three_prime_UTR | 50.0% | |
| ATAGGGTCTGAGAGGACAAC+TGG | + | tig0024533:44837-44856 | None:intergenic | 50.0% | |
| AGTTGTCCTCTCAGACCCTA+TGG | - | tig0024533:44836-44855 | Msa1418000:three_prime_UTR | 50.0% | |
| ! | AAGGTCGACTGAAGCTCTGA+AGG | - | tig0024533:45589-45608 | Msa1418000:intron | 50.0% |
| CCGCAGAAGCAACACTTAGA+AGG | - | tig0024533:46128-46147 | Msa1418000:CDS | 50.0% | |
| GGGGCAATGGCGTTATCAAT+TGG | + | tig0024533:46187-46206 | None:intergenic | 50.0% | |
| ACTAGAGAGGGAGCTAGCAA+GGG | - | tig0024533:46878-46897 | Msa1418000:intron | 50.0% | |
| AGGTCATGCCTGTCAAGCAA+TGG | - | tig0024533:46964-46983 | Msa1418000:intron | 50.0% | |
| CTTCAGCTGTGATTCTGCCT+TGG | + | tig0024533:47569-47588 | None:intergenic | 50.0% | |
| CAAGGCAGAATCACAGCTGA+AGG | - | tig0024533:47567-47586 | Msa1418000:CDS | 50.0% | |
| !! | TTGGACCACCACTTGCTGTT+CGG | + | tig0024533:47758-47777 | None:intergenic | 50.0% |
| TCGTCACTGCACGAGTCATT+TGG | + | tig0024533:48098-48117 | None:intergenic | 50.0% | |
| TGACTCGTGCAGTGACGATT+TGG | - | tig0024533:48100-48119 | Msa1418000:intron | 50.0% | |
| !! | TGCAGTGACGATTTGGTGTC+AGG | - | tig0024533:48107-48126 | Msa1418000:intron | 50.0% |
| ACATGTCCCGTGTCAATGTC+TGG | - | tig0024533:48289-48308 | Msa1418000:intron | 50.0% | |
| ACACGTGCCAGACATTGACA+CGG | + | tig0024533:48299-48318 | None:intergenic | 50.0% | |
| ACCAACATGGTCCTGACACA+TGG | - | tig0024533:48330-48349 | Msa1418000:intron | 50.0% | |
| ACCATGTGTCAGGACCATGT+TGG | + | tig0024533:48334-48353 | None:intergenic | 50.0% | |
| ! | TGATGCACTGACCAAGTCCA+TGG | - | tig0024533:48637-48656 | Msa1418000:intron | 50.0% |
| CCACTCTACTTCCATGGACT+TGG | + | tig0024533:48651-48670 | None:intergenic | 50.0% | |
| CCAAGTCCATGGAAGTAGAG+TGG | - | tig0024533:48648-48667 | Msa1418000:intron | 50.0% | |
| ! | CAGCCACACTAACCTTTTGG+AGG | + | tig0024533:48765-48784 | None:intergenic | 50.0% |
| !! | CTGGAACTCCTTTTTGGCAG+TGG | + | tig0024533:48979-48998 | None:intergenic | 50.0% |
| CCAACACCATAGGGTCTGAG+AGG | + | tig0024533:44845-44864 | None:intergenic | 55.0% | |
| CCTCTCAGACCCTATGGTGT+TGG | - | tig0024533:44842-44861 | Msa1418000:three_prime_UTR | 55.0% | |
| TGCGGCCACAATTGCAGTTG+TGG | + | tig0024533:45812-45831 | None:intergenic | 55.0% | |
| CTCAGCTTGAAGAGGGGCAA+TGG | + | tig0024533:46200-46219 | None:intergenic | 55.0% | |
| CACTAGAGAGGGAGCTAGCA+AGG | - | tig0024533:46877-46896 | Msa1418000:intron | 55.0% | |
| AGTTCCCGAACAGCAAGTGG+TGG | - | tig0024533:47750-47769 | Msa1418000:CDS | 55.0% | |
| !! | TGGACCACCACTTGCTGTTC+GGG | + | tig0024533:47757-47776 | None:intergenic | 55.0% |
| CACGTGCCAGACATTGACAC+GGG | + | tig0024533:48298-48317 | None:intergenic | 55.0% | |
| GGGTCTGAGAGGACAACTGG+AGG | + | tig0024533:44834-44853 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024533 | gene | 44774 | 49208 | 44774 | ID=Msa1418000;Name=Msa1418000 |
| tig0024533 | mRNA | 44774 | 49208 | 44774 | ID=Msa1418000-mRNA-1;Parent=Msa1418000;Name=Msa1418000-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|1|0.90|1|1|1|11|338|573 |
| tig0024533 | exon | 44774 | 45130 | 44774 | ID=Msa1418000-mRNA-1:exon:167;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 45211 | 45362 | 45211 | ID=Msa1418000-mRNA-1:exon:166;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 45756 | 46316 | 45756 | ID=Msa1418000-mRNA-1:exon:165;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 46394 | 46465 | 46394 | ID=Msa1418000-mRNA-1:exon:164;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 46972 | 47118 | 46972 | ID=Msa1418000-mRNA-1:exon:163;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 47209 | 47364 | 47209 | ID=Msa1418000-mRNA-1:exon:162;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 47460 | 47630 | 47460 | ID=Msa1418000-mRNA-1:exon:161;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 47742 | 47912 | 47742 | ID=Msa1418000-mRNA-1:exon:160;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 48022 | 48087 | 48022 | ID=Msa1418000-mRNA-1:exon:159;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 48354 | 48439 | 48354 | ID=Msa1418000-mRNA-1:exon:158;Parent=Msa1418000-mRNA-1 |
| tig0024533 | exon | 49088 | 49208 | 49088 | ID=Msa1418000-mRNA-1:exon:157;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 49088 | 49208 | 49088 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 48354 | 48439 | 48354 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 48022 | 48087 | 48022 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 47742 | 47912 | 47742 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 47460 | 47630 | 47460 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 47209 | 47364 | 47209 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 46972 | 47118 | 46972 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 46394 | 46465 | 46394 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 45756 | 46316 | 45756 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 45211 | 45362 | 45211 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | CDS | 45112 | 45130 | 45112 | ID=Msa1418000-mRNA-1:cds;Parent=Msa1418000-mRNA-1 |
| tig0024533 | three_prime_UTR | 44774 | 45111 | 44774 | ID=Msa1418000-mRNA-1:three_prime_utr;Parent=Msa1418000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
