AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1224380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224380 MtrunA17_Chr4g0076281 99.190 741 5 1 1 740 1 741 0.0 1503
Msa1224380 MtrunA17_Chr3g0119871 54.910 723 314 5 20 740 24 736 0.0 846
Msa1224380 MtrunA17_Chr2g0279871 53.986 715 323 3 28 739 28 739 0.0 829
Msa1224380 MtrunA17_Chr4g0049511 52.767 741 344 4 4 740 2 740 0.0 827
Msa1224380 MtrunA17_Chr3g0141131 52.394 731 338 5 14 740 2 726 0.0 820
Msa1224380 MtrunA17_Chr5g0446791 52.267 750 336 10 6 740 10 752 0.0 793
Msa1224380 MtrunA17_Chr8g0360211 51.801 722 341 4 21 740 23 739 0.0 777
Msa1224380 MtrunA17_Chr7g0257931 49.459 740 358 8 9 740 21 752 0.0 769
Msa1224380 MtrunA17_Chr5g0446821 49.802 759 334 8 24 740 20 773 0.0 756
Msa1224380 MtrunA17_Chr7g0257941 49.724 724 351 7 21 736 61 779 0.0 733
Msa1224380 MtrunA17_Chr7g0257971 47.043 727 335 8 21 739 51 735 0.0 682
Msa1224380 MtrunA17_Chr5g0446811 50.365 548 264 6 200 740 16 562 0.0 566
Msa1224380 MtrunA17_Chr4g0075771 57.278 316 38 7 215 527 1 222 2.08e-94 293
Msa1224380 MtrunA17_Chr5g0446801 56.983 179 71 2 23 199 20 194 1.15e-61 206
Msa1224380 MtrunA17_Chr5g0437391 84.615 39 6 0 638 676 302 340 1.56e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224380 AT4G16370.1 83.311 737 117 2 9 740 2 737 0.0 1286
Msa1224380 AT5G64410.1 53.909 729 329 3 14 739 4 728 0.0 844
Msa1224380 AT1G09930.1 53.920 727 330 3 15 740 12 734 0.0 839
Msa1224380 AT4G10770.1 54.659 719 315 5 24 740 56 765 0.0 830
Msa1224380 AT4G27730.1 52.893 726 332 6 20 740 16 736 0.0 793
Msa1224380 AT4G26590.1 53.224 729 327 8 21 740 30 753 0.0 784
Msa1224380 AT5G53520.1 50.476 735 354 6 10 740 5 733 0.0 766
Msa1224380 AT5G55930.1 51.265 751 348 9 3 740 10 755 0.0 759
Msa1224380 AT5G53510.1 51.724 725 340 6 21 740 22 741 0.0 743
Msa1224380 AT4G10770.2 53.874 555 252 2 186 740 1 551 0.0 639

Find 230 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTCCGTTCATGGTTTC+TGG 0.067027 8_1:+89326650 Msa1224380:CDS
AACTTGCTCTTTAAGATTTA+TGG 0.075578 8_1:+89329756 Msa1224380:CDS
AGAGGAATCCATTTCTTATT+AGG 0.117365 8_1:-89330241 None:intergenic
ATCAAATGTCACTCTGTATT+TGG 0.125563 8_1:-89330086 None:intergenic
ATAGAAGGGTCGTCGGTTTC+AGG 0.219683 8_1:-89326618 None:intergenic
AACATACCAGTTATATCTTA+TGG 0.249371 8_1:+89330268 Msa1224380:CDS
CCTCTCTTCGCATTGTCTAT+TGG 0.252317 8_1:+89329120 Msa1224380:CDS
CATTTGATGCATCTGTTATA+TGG 0.253153 8_1:+89330101 Msa1224380:CDS
TGGGGCATGCTCTTTGCTTT+TGG 0.255507 8_1:+89329484 Msa1224380:CDS
TATTTAGTCCCTTCACCTTT+TGG 0.258287 8_1:-89330665 None:intergenic
CAGTCATGACTTTCCGTTCA+TGG 0.259187 8_1:+89326643 Msa1224380:CDS
TTCCCCACCATTTGAGAGTA+TGG 0.265799 8_1:-89330483 None:intergenic
TTGCACAAGTCTCTCTCTTT+AGG 0.271929 8_1:+89327772 Msa1224380:CDS
GTGTCTGGAGTTGGATTCTT+TGG 0.283544 8_1:-89326528 None:intergenic
GAGGAATCCATTTCTTATTA+GGG 0.287451 8_1:-89330240 None:intergenic
GGACTTCCATTGTTAATGTT+GGG 0.298039 8_1:+89328896 Msa1224380:CDS
AAACCTTGTATGGTTATTCT+TGG 0.307696 8_1:+89330171 Msa1224380:CDS
ACTTGCTCTTTAAGATTTAT+GGG 0.308701 8_1:+89329757 Msa1224380:CDS
TAATTCTACCCGTATGTTAC+TGG 0.309917 8_1:+89328944 Msa1224380:CDS
TCAATTGGACATCTGTCGTC+TGG 0.310442 8_1:-89326576 None:intergenic
TATATTCAGTTAACTGATAA+TGG 0.310802 8_1:+89330781 Msa1224380:three_prime_UTR
AATATCACAGCACAACAAAT+TGG 0.314764 8_1:+89328784 Msa1224380:CDS
CAGTGTTGCCAGTTCCTGTT+TGG 0.322093 8_1:+89330200 Msa1224380:CDS
TCTTCTTCTCTTATCTTCAA+TGG 0.326713 8_1:+89326503 Msa1224380:exon
TAAATTGAGTTGCAGATATT+GGG 0.332470 8_1:+89327681 Msa1224380:intron
TGGGATTCTGAGGAGGTATC+TGG 0.336220 8_1:+89327716 Msa1224380:CDS
ACTGAATATATCCATAAATA+AGG 0.347320 8_1:-89330768 None:intergenic
GCAATGTTAGTTGGAGTTGC+AGG 0.354795 8_1:-89330307 None:intergenic
CAAATCGCTGTTCTTCCAAT+TGG 0.356781 8_1:+89326759 Msa1224380:CDS
TGGTATACTCCAAACCTAAC+TGG 0.358374 8_1:-89330645 None:intergenic
TCTTCCAATTGGAAAATTCA+TGG 0.361492 8_1:+89326770 Msa1224380:CDS
CAAATGGTGGGGAACTGAAT+TGG 0.363146 8_1:+89330492 Msa1224380:CDS
CATAATAATTGCTAAGCAAT+TGG 0.371780 8_1:-89330689 None:intergenic
ATTGATGCATACAACAAGTA+TGG 0.374972 8_1:+89329081 Msa1224380:CDS
TTTAGGGGTGTGGACCAGTT+AGG 0.376183 8_1:+89330631 Msa1224380:three_prime_UTR
ACTCATGTAGCATTATTTCA+TGG 0.378517 8_1:+89329174 Msa1224380:CDS
GGTTACCATGGACTTGGAAT+TGG 0.380324 8_1:+89328811 Msa1224380:CDS
GAGACTTGTGCAAGGTTTGA+TGG 0.380591 8_1:-89327762 None:intergenic
TTGGTGCATTCACACTTGAT+TGG 0.389457 8_1:+89328830 Msa1224380:CDS
ACGAGAGCTACTTCTTCAAT+TGG 0.390352 8_1:-89326591 None:intergenic
GGGTGTGGACCAGTTAGGTT+TGG 0.390748 8_1:+89330636 Msa1224380:three_prime_UTR
TTCTTGCAAGATCTCAAACT+TGG 0.392501 8_1:+89329807 Msa1224380:CDS
TCAAATGTCACTCTGTATTT+GGG 0.393782 8_1:-89330085 None:intergenic
ACTTTCCGTTCATGGTTTCT+GGG 0.394577 8_1:+89326651 Msa1224380:CDS
GATGGCCACCACATTTCAAC+AGG 0.394766 8_1:-89327744 None:intergenic
ATGATCGGGTATCTCCTTCC+TGG 0.395403 8_1:+89329720 Msa1224380:CDS
AAAATGAGGAACCACCATTC+TGG 0.396998 8_1:-89329391 None:intergenic
TTCGCATTGTCTATTGGATC+AGG 0.399417 8_1:+89329126 Msa1224380:CDS
TTAAAGAGCAAGTTTGCAAT+TGG 0.399423 8_1:-89329747 None:intergenic
ATTTGATGCATCTGTTATAT+GGG 0.400325 8_1:+89330102 Msa1224380:CDS
TCCATTGTTAATGTTGGGGT+TGG 0.406267 8_1:+89328901 Msa1224380:CDS
TTGCATAAGAATAGCAGAAA+TGG 0.413613 8_1:-89326739 None:intergenic
GCAAAACCATAAGATATAAC+TGG 0.414513 8_1:-89330274 None:intergenic
GCCACCAACGTTTGTGGAAG+CGG 0.418100 8_1:-89330372 None:intergenic
TGGCGTTTCACGTTGAATCC+TGG 0.422294 8_1:+89326831 Msa1224380:CDS
GGCTTTCTCTATTAGAATAC+AGG 0.423380 8_1:-89330571 None:intergenic
CAACCATCAACCACAATTCC+TGG 0.425417 8_1:-89330547 None:intergenic
CTTGTATGGTTATTCTTGGT+TGG 0.425735 8_1:+89330175 Msa1224380:CDS
AAATCTACCCTAATAAGAAA+TGG 0.430734 8_1:+89330233 Msa1224380:CDS
CTGGTGGGAACACTAGTTGC+TGG 0.432578 8_1:+89329968 Msa1224380:CDS
ATCGGACCGAAGCGGCTATT+CGG 0.432929 8_1:+89330130 Msa1224380:CDS
AAAGTCATGACTGGAATAGA+AGG 0.434612 8_1:-89326633 None:intergenic
CTAAACACCCAAACAGGAAC+TGG 0.434990 8_1:-89330208 None:intergenic
AGTGTTGCCAGTTCCTGTTT+GGG 0.439349 8_1:+89330201 Msa1224380:CDS
GCTCCAGGAATTGTGGTTGA+TGG 0.439708 8_1:+89330544 Msa1224380:CDS
ACATGCTCCTTCATATTAAA+CGG 0.440905 8_1:-89326855 None:intergenic
CTATCCGCGGCGCTTGATGC+AGG 0.442801 8_1:+89330412 Msa1224380:CDS
ATTTCTGCCACCAACGTTTG+TGG 0.444531 8_1:-89330378 None:intergenic
CCGTCTTAACATTCTTCTCA+TGG 0.444739 8_1:+89328740 Msa1224380:CDS
GATTGTACCGAAACCTTGTA+TGG 0.445058 8_1:+89330161 Msa1224380:CDS
TAGAAGGGTCGTCGGTTTCA+GGG 0.446344 8_1:-89326617 None:intergenic
AGCCAGCTTGCAATGTTAGT+TGG 0.448468 8_1:-89330316 None:intergenic
GTACCTGGTTGGTAGTTGCT+TGG 0.449016 8_1:-89329543 None:intergenic
TGGACTTCCATTGTTAATGT+TGG 0.454339 8_1:+89328895 Msa1224380:CDS
TGGTGCATTCACACTTGATT+GGG 0.454657 8_1:+89328831 Msa1224380:CDS
AATGTTAAGATCATATTCCT+TGG 0.457676 8_1:-89329061 None:intergenic
GTGGATGTTGGATAGCATAA+AGG 0.461735 8_1:+89330015 Msa1224380:CDS
CAATTGGACATCTGTCGTCT+GGG 0.463466 8_1:-89326575 None:intergenic
CCCAACTGCTCCAGGAATTG+TGG 0.465847 8_1:+89330537 Msa1224380:CDS
TTCTTGTTCTGTCAAATGAC+AGG 0.467690 8_1:-89326390 None:intergenic
GCTACTTGCCCAACTGCTCC+AGG 0.469429 8_1:+89330529 Msa1224380:CDS
AGAATAACCATACAAGGTTT+CGG 0.470528 8_1:-89330168 None:intergenic
ATATTGGGCTATGGATGGGC+TGG 0.471536 8_1:+89327696 Msa1224380:CDS
TTCAGTGGCTTGGTGGATGT+TGG 0.472380 8_1:+89330003 Msa1224380:CDS
TTCTTCGCTCTGCAAAATGC+AGG 0.473572 8_1:+89330460 Msa1224380:CDS
ATGCTTCTTGCTTGTTATCA+CGG 0.476348 8_1:+89330715 Msa1224380:three_prime_UTR
AAGCTCACCATGACAGTCCT+TGG 0.477430 8_1:+89330056 Msa1224380:CDS
TGCAGATATTGGGCTATGGA+TGG 0.480173 8_1:+89327691 Msa1224380:intron
TGGTGAACCTTTCAGTGGCT+TGG 0.483420 8_1:+89329993 Msa1224380:CDS
GGATCAGGTTACCATGGACT+TGG 0.486591 8_1:+89328805 Msa1224380:CDS
ACCACAATTCCTGGAGCAGT+TGG 0.490448 8_1:-89330538 None:intergenic
CCTGGTCCGAATAGCCGCTT+CGG 0.490623 8_1:-89330136 None:intergenic
GTGCTGTATACATGCATCGC+GGG 0.491917 8_1:-89329848 None:intergenic
AAAGAGAATAAATCATCAAA+AGG 0.492126 8_1:+89328640 Msa1224380:CDS
TTGCTTGGATGACACCGATT+GGG 0.492702 8_1:-89329528 None:intergenic
TGAACCTTTCAGTGGCTTGG+TGG 0.493204 8_1:+89329996 Msa1224380:CDS
CATGGCGCTATCTTTAGTAA+TGG 0.493754 8_1:+89329426 Msa1224380:CDS
GCTAACTGTGGTGTTTCTCA+AGG 0.493992 8_1:+89326894 Msa1224380:CDS
ATGTAGCATTATTTCATGGC+AGG 0.497819 8_1:+89329178 Msa1224380:CDS
ACAGAATATATAATATCAAA+AGG 0.499157 8_1:+89330893 Msa1224380:three_prime_UTR
TCTTGCAAGATCTCAAACTT+GGG 0.499677 8_1:+89329808 Msa1224380:CDS
CAGTTGGGCAAGTAGCCAAC+GGG 0.500085 8_1:-89330522 None:intergenic
AACAACTGATTAGAGAATAT+AGG 0.501653 8_1:-89328997 None:intergenic
GCATTCACACTTGATTGGGC+TGG 0.502823 8_1:+89328835 Msa1224380:CDS
GCTGGAATTTCAGCTTATCA+TGG 0.502833 8_1:+89328853 Msa1224380:CDS
TTTGTTGTAACTCTCCCAAT+CGG 0.506469 8_1:+89329514 Msa1224380:CDS
AAGTTTGCAATTGGTTTCCC+AGG 0.508014 8_1:-89329738 None:intergenic
GGCAAGTAGCCAACGGGCAA+TGG 0.509667 8_1:-89330516 None:intergenic
TCCTGGTCCGTTTAATATGA+AGG 0.510592 8_1:+89326848 Msa1224380:CDS
ATGCAGGCCATACTCTCAAA+TGG 0.511772 8_1:+89330476 Msa1224380:CDS
GACTTCCATTGTTAATGTTG+GGG 0.513380 8_1:+89328897 Msa1224380:CDS
AGACAGAGTAAATCAGCAAT+GGG 0.519389 8_1:+89329316 Msa1224380:CDS
ATTATTGCACAGTTCATGAT+CGG 0.519983 8_1:+89329705 Msa1224380:CDS
CGCGGCGCTTGATGCAGGCA+CGG 0.520662 8_1:+89330417 Msa1224380:CDS
AATCAGTTGTTCACGTCAAG+TGG 0.522906 8_1:+89329009 Msa1224380:CDS
TCTGTTATATGGGGTTTGAT+CGG 0.525236 8_1:+89330112 Msa1224380:CDS
TCTCATGGATTTGCTACGCA+TGG 0.525558 8_1:+89328755 Msa1224380:CDS
TTATTGCACAGTTCATGATC+GGG 0.526020 8_1:+89329706 Msa1224380:CDS
ATGGTTACCTTGCAGCAACC+TGG 0.527539 8_1:+89329675 Msa1224380:intron
CCACAATTCCTGGAGCAGTT+GGG 0.528952 8_1:-89330537 None:intergenic
AGAATAGCAGAAATGGTTAG+TGG 0.530312 8_1:-89326732 None:intergenic
AAGACGGTGAAAAGATAGCC+GGG 0.530909 8_1:-89328724 None:intergenic
TGTTCTGTCAAATGACAGGT+TGG 0.532135 8_1:-89326386 None:intergenic
TCCGCTTCCACAAACGTTGG+TGG 0.532601 8_1:+89330371 Msa1224380:CDS
TTGCAATTGGTTTCCCAGGA+AGG 0.533006 8_1:-89329734 None:intergenic
TGTTGTGCTGTGATATTATG+TGG 0.533560 8_1:-89328778 None:intergenic
CATAATAGTAATAGCACCAA+TGG 0.534949 8_1:-89326934 None:intergenic
TGTCAAATGACAGGTTGGAA+TGG 0.538022 8_1:-89326381 None:intergenic
GGTGGTGATGCTTACTCCAT+TGG 0.540854 8_1:+89326918 Msa1224380:CDS
AGAGAAAGCCTAGTTGACTT+AGG 0.541749 8_1:+89330584 Msa1224380:three_prime_UTR
GTTAAACCTCCAGTAACATA+CGG 0.543093 8_1:-89328953 None:intergenic
AATCATCAAAAGGCTTTACA+AGG 0.543100 8_1:+89328650 Msa1224380:CDS
TTCTTGTATTATGCACTCCC+CGG 0.543396 8_1:+89328706 Msa1224380:CDS
AAAGTAGTTGAAGATCATTC+CGG 0.548296 8_1:-89330344 None:intergenic
TATTGGGCTATGGATGGGCT+GGG 0.548491 8_1:+89327697 Msa1224380:CDS
AATATATCCATAAATAAGGC+AGG 0.549588 8_1:-89330764 None:intergenic
ACAGCACAACAAATTGGATC+AGG 0.552728 8_1:+89328790 Msa1224380:CDS
TGGAAGTCCATGGTGCAACA+AGG 0.553249 8_1:-89328882 None:intergenic
CAACCAAGAATAACCATACA+AGG 0.554993 8_1:-89330174 None:intergenic
AAATAGAGCCTAAGTCAACT+AGG 0.555311 8_1:-89330592 None:intergenic
CTTATAAGCAAGTACCAGAA+TGG 0.556871 8_1:+89329377 Msa1224380:CDS
TGTGCAATAATGTCATATCC+AGG 0.560478 8_1:-89329693 None:intergenic
TAGGTTTGGAGTATACCAAA+AGG 0.561650 8_1:+89330650 Msa1224380:three_prime_UTR
TGCTTCCAAATAATAAAATG+AGG 0.567240 8_1:-89329405 None:intergenic
GGATGTGCAACTTCCATGGT+GGG 0.570574 8_1:+89329465 Msa1224380:CDS
GAGACAGAGTAAATCAGCAA+TGG 0.571794 8_1:+89329315 Msa1224380:CDS
ATGGATGGGCTGGGATTCTG+AGG 0.572003 8_1:+89327706 Msa1224380:CDS
GCAGTTGGGCAAGTAGCCAA+CGG 0.572167 8_1:-89330523 None:intergenic
AGGCCATACTCTCAAATGGT+GGG 0.572786 8_1:+89330480 Msa1224380:CDS
TGGAGTGGTGAACCTTTCAG+TGG 0.573103 8_1:+89329988 Msa1224380:CDS
TCCTTCATATTAAACGGACC+AGG 0.573981 8_1:-89326849 None:intergenic
CATGAACGGAAAGTCATGAC+TGG 0.574907 8_1:-89326642 None:intergenic
CTTGCAAGAAAGAGAGTGCA+TGG 0.576649 8_1:-89329794 None:intergenic
GGAAGTCCATGGTGCAACAA+GGG 0.576753 8_1:-89328881 None:intergenic
TGAATTTCCAAATAGCTGGT+GGG 0.577855 8_1:+89329953 Msa1224380:intron
ATTGCAAGCTGGCTATTGAC+CGG 0.579049 8_1:+89330325 Msa1224380:CDS
TAAGACGGTGAAAAGATAGC+CGG 0.580107 8_1:-89328725 None:intergenic
GAATGGAGTTAGTACCTGGT+TGG 0.581377 8_1:-89329554 None:intergenic
TGATCGGGTATCTCCTTCCT+GGG 0.581852 8_1:+89329721 Msa1224380:CDS
TGCTGTATACATGCATCGCG+GGG 0.582828 8_1:-89329847 None:intergenic
CTGTATTTGGGACAAGTCCA+AGG 0.583762 8_1:-89330073 None:intergenic
TCCAACCCCAACATTAACAA+TGG 0.583982 8_1:-89328902 None:intergenic
AACGTAAAAGTTGATGTGCA+TGG 0.586475 8_1:+89329340 Msa1224380:CDS
CCAATAGACAATGCGAAGAG+AGG 0.587306 8_1:-89329120 None:intergenic
TTTGATGCATCTGTTATATG+GGG 0.588349 8_1:+89330103 Msa1224380:CDS
TGGAGTATACCAAAAGGTGA+AGG 0.589389 8_1:+89330656 Msa1224380:three_prime_UTR
CAAGAAAGAGAGTGCATGGA+CGG 0.590038 8_1:-89329790 None:intergenic
GTTGCTTGGATGACACCGAT+TGG 0.590305 8_1:-89329529 None:intergenic
TGTGGTGTTTCTCAAGGTGG+TGG 0.591102 8_1:+89326900 Msa1224380:CDS
ATGCACCAATTCCAAGTCCA+TGG 0.591178 8_1:-89328816 None:intergenic
AAACTCTTTCGTGGGAAGAG+TGG 0.591371 8_1:-89326796 None:intergenic
CTCCAACTAACATTGCAAGC+TGG 0.593648 8_1:+89330314 Msa1224380:CDS
GAAATAATGCTACATGAGTG+AGG 0.594196 8_1:-89329170 None:intergenic
GAGTTGCAGATATTGGGCTA+TGG 0.594376 8_1:+89327687 Msa1224380:intron
TTCTACCCGTATGTTACTGG+AGG 0.594516 8_1:+89328947 Msa1224380:CDS
CGGATGTGCAACTTCCATGG+TGG 0.594864 8_1:+89329464 Msa1224380:CDS
GATTCTGAGGAGGTATCTGG+TGG 0.595497 8_1:+89327719 Msa1224380:CDS
TAGCATAAAGGACATTTGCA+TGG 0.596796 8_1:+89330027 Msa1224380:CDS
CTCTTTCGTGGGAAGAGTGG+CGG 0.596961 8_1:-89326793 None:intergenic
AATTGGACATCTGTCGTCTG+GGG 0.597748 8_1:-89326574 None:intergenic
ATTCATCGTCTTAACCACTC+AGG 0.598386 8_1:+89326998 Msa1224380:CDS
GACTGGAATAGAAGGGTCGT+CGG 0.598556 8_1:-89326625 None:intergenic
CAAATTGGATCAGGTTACCA+TGG 0.599410 8_1:+89328799 Msa1224380:CDS
GGCCATACTCTCAAATGGTG+GGG 0.599445 8_1:+89330481 Msa1224380:CDS
AACTGTGGTGTTTCTCAAGG+TGG 0.609520 8_1:+89326897 Msa1224380:CDS
CCATGAGAAGAATGTTAAGA+CGG 0.610563 8_1:-89328740 None:intergenic
GAAGTCCATGGTGCAACAAG+GGG 0.611896 8_1:-89328880 None:intergenic
CATCCAAGCAACTACCAACC+AGG 0.613390 8_1:+89329540 Msa1224380:CDS
TGAATTGGACCATTGCCCGT+TGG 0.615015 8_1:+89330507 Msa1224380:CDS
ACATCCACCAAGCCACTGAA+AGG 0.615061 8_1:-89330000 None:intergenic
GGAGTATACCAAAAGGTGAA+GGG 0.617937 8_1:+89330657 Msa1224380:three_prime_UTR
AAACGGATGTGCAACTTCCA+TGG 0.618006 8_1:+89329461 Msa1224380:CDS
TGGTGGACCCTGTTGAAATG+TGG 0.620171 8_1:+89327736 Msa1224380:CDS
ACATTAACAATGGAAGTCCA+TGG 0.620631 8_1:-89328892 None:intergenic
GCGATGCATGTATACAGCAC+AGG 0.620769 8_1:+89329851 Msa1224380:CDS
GCAGATATTGGGCTATGGAT+GGG 0.622626 8_1:+89327692 Msa1224380:intron
ATTGGACATCTGTCGTCTGG+GGG 0.624277 8_1:-89326573 None:intergenic
GCAAAGAGCATGCCCCACCA+TGG 0.624881 8_1:-89329478 None:intergenic
AAATAATGCTACATGAGTGA+GGG 0.627674 8_1:-89329169 None:intergenic
CAGGCCATACTCTCAAATGG+TGG 0.629647 8_1:+89330479 Msa1224380:CDS
ATACAAGAAGCTAACGCCCA+TGG 0.630377 8_1:-89328692 None:intergenic
TGGACCCTGTTGAAATGTGG+TGG 0.631265 8_1:+89327739 Msa1224380:CDS
AAGTCATGACTGGAATAGAA+GGG 0.641825 8_1:-89326632 None:intergenic
ATAACTGGTATGTTTATCAG+AGG 0.641908 8_1:-89330259 None:intergenic
GGGAACACTAGTTGCTGGAG+TGG 0.642198 8_1:+89329973 Msa1224380:CDS
GATGGGCTGGGATTCTGAGG+AGG 0.642204 8_1:+89327709 Msa1224380:CDS
TGTTCCGCTTCCACAAACGT+TGG 0.644974 8_1:+89330368 Msa1224380:CDS
AGCTAACGCCCATGGCAATG+AGG 0.647346 8_1:-89328684 None:intergenic
GACAAGTCCAAGGACTGTCA+TGG 0.647797 8_1:-89330063 None:intergenic
TTCACAATGCGTCCTCTCAG+CGG 0.649085 8_1:-89326342 None:intergenic
ATGTTAGTTGGAGTTGCAGG+TGG 0.652154 8_1:-89330304 None:intergenic
TTAAGACGATGAATAGAGCA+AGG 0.653502 8_1:-89326989 None:intergenic
AGGTTTCGGTACAATCCACC+TGG 0.653741 8_1:-89330154 None:intergenic
CTTCTTGCTTGTTATCACGG+AGG 0.654060 8_1:+89330718 Msa1224380:three_prime_UTR
ATAAGCAAGTACCAGAATGG+TGG 0.668486 8_1:+89329380 Msa1224380:CDS
CACGACAAAGATCTTAACCA+AGG 0.669431 8_1:+89329044 Msa1224380:CDS
TTAAACCTCCAGTAACATAC+GGG 0.670866 8_1:-89328952 None:intergenic
GATGTGCAACTTCCATGGTG+GGG 0.672934 8_1:+89329466 Msa1224380:CDS
ATATAATTATGTTCTATCCG+CGG 0.673884 8_1:+89330399 Msa1224380:CDS
TAAAGAGAGAGACTTGTGCA+AGG 0.675007 8_1:-89327770 None:intergenic
TGTGCTGTATACATGCATCG+CGG 0.677093 8_1:-89329849 None:intergenic
ACAATGCGAAGAGAGGACTA+AGG 0.678835 8_1:-89329113 None:intergenic
TAATTCCCAGAAACCATGAA+CGG 0.680108 8_1:-89326656 None:intergenic
GGGGTTTGATCGGACCGAAG+CGG 0.684425 8_1:+89330122 Msa1224380:CDS
TATAAACAAACACCGCTGAG+AGG 0.685076 8_1:+89326330 None:intergenic
AAGCGGCTATTCGGACCAGG+TGG 0.693998 8_1:+89330139 Msa1224380:CDS
AGACGGTGAAAAGATAGCCG+GGG 0.701353 8_1:-89328723 None:intergenic
ATGGCCACCACATTTCAACA+GGG 0.710481 8_1:-89327743 None:intergenic
AAGTCCATGGTGCAACAAGG+GGG 0.711094 8_1:-89328879 None:intergenic
GCTGTATACATGCATCGCGG+GGG 0.718081 8_1:-89329846 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTAATTCTATT+TGG + chr8_1:89327024-89327043 Msa1224380:intron 10.0%
!!! TTTATTATCTTTTAATTTAG+AGG + chr8_1:89327070-89327089 Msa1224380:intron 10.0%
!!! ATATCAATATTATTTGATTT+TGG - chr8_1:89327329-89327348 None:intergenic 10.0%
!! TATAATAAACAAGTAAATCA+AGG - chr8_1:89327161-89327180 None:intergenic 15.0%
!! TATAACTTAGTATATGTTAA+TGG + chr8_1:89327346-89327365 Msa1224380:intron 15.0%
!!! TATTCATTCATTTTGTAAAT+TGG - chr8_1:89328040-89328059 None:intergenic 15.0%
!! AAGAAATAAGTTTATTCTAA+AGG - chr8_1:89329220-89329239 None:intergenic 15.0%
!!! TTTTTTTGGTCAAAGATTTT+TGG + chr8_1:89327114-89327133 Msa1224380:intron 20.0%
!! AATAAAATAATTCTCACGAT+TGG - chr8_1:89327204-89327223 None:intergenic 20.0%
!! TGTTAATGGTTATTAAATGA+TGG + chr8_1:89327360-89327379 Msa1224380:intron 20.0%
!!! GTTCTATTGTTTTTTTGTTT+TGG + chr8_1:89327519-89327538 Msa1224380:intron 20.0%
!!! AAGATGAGTTGAATTTAATT+TGG + chr8_1:89327562-89327581 Msa1224380:intron 20.0%
!! CAATTGAATAAAACGTAATA+TGG - chr8_1:89327820-89327839 None:intergenic 20.0%
!!! CATATTACGTTTTATTCAAT+TGG + chr8_1:89327818-89327837 Msa1224380:intron 20.0%
!!! TCTCTTATTTATAAACTCAA+GGG + chr8_1:89328125-89328144 Msa1224380:intron 20.0%
!! AAAATCAAAAAGAACTTGTA+TGG + chr8_1:89328167-89328186 Msa1224380:intron 20.0%
!! CATATTTACAACTTTCAATT+TGG - chr8_1:89328315-89328334 None:intergenic 20.0%
!! AATATTCTCTAATGTTTCTT+TGG + chr8_1:89328447-89328466 Msa1224380:intron 20.0%
!!! ATGATTTATTCTCTTTTTCA+TGG - chr8_1:89328636-89328655 None:intergenic 20.0%
!! AAAGAGAATAAATCATCAAA+AGG + chr8_1:89328640-89328659 Msa1224380:CDS 20.0%
!! TCTTATACATGTATTAACTA+AGG + chr8_1:89329236-89329255 Msa1224380:intron 20.0%
!!! AAAAGAAAAGTGTAGATTAT+AGG - chr8_1:89329593-89329612 None:intergenic 20.0%
!! TAACAAGCAAGAAAAAAAAA+AGG - chr8_1:89329919-89329938 None:intergenic 20.0%
!!! TTTTACTTGTTTTTGCTTTT+AGG + chr8_1:89330614-89330633 Msa1224380:three_prime_UTR 20.0%
!!! TTTACTTGTTTTTGCTTTTA+GGG + chr8_1:89330615-89330634 Msa1224380:three_prime_UTR 20.0%
!! ACTGAATATATCCATAAATA+AGG - chr8_1:89330771-89330790 None:intergenic 20.0%
!! TATATTCAGTTAACTGATAA+TGG + chr8_1:89330781-89330800 Msa1224380:three_prime_UTR 20.0%
!!! TTTTAGGAATTGAAAATTCA+TGG + chr8_1:89330829-89330848 Msa1224380:three_prime_UTR 20.0%
!!! AATTGAAAATTCATGGTTTT+TGG + chr8_1:89330836-89330855 Msa1224380:three_prime_UTR 20.0%
! AAAAAGTTAAACTCTTTCGT+GGG - chr8_1:89326807-89326826 None:intergenic 25.0%
! AAAAAAGTTAAACTCTTTCG+TGG - chr8_1:89326808-89326827 None:intergenic 25.0%
!!! ACGAAAGAGTTTAACTTTTT+TGG + chr8_1:89326807-89326826 Msa1224380:CDS 25.0%
!!! CGAAAGAGTTTAACTTTTTT+GGG + chr8_1:89326808-89326827 Msa1224380:CDS 25.0%
!!! TTAGTGCAAAGTAGTTTTTT+TGG + chr8_1:89327100-89327119 Msa1224380:intron 25.0%
!! GTTCAGTGTTGAAAAAAATT+TGG + chr8_1:89327453-89327472 Msa1224380:intron 25.0%
!! TAAATTGAGTTGCAGATATT+GGG + chr8_1:89327681-89327700 Msa1224380:intron 25.0%
! AAACGTAATATGGAAGAAAA+GGG - chr8_1:89327810-89327829 None:intergenic 25.0%
! AAAACGTAATATGGAAGAAA+AGG - chr8_1:89327811-89327830 None:intergenic 25.0%
! TATTTACTTCAATAACCCTT+TGG + chr8_1:89327849-89327868 Msa1224380:intron 25.0%
!!! TACTTTTAGAAATCACCAAA+GGG - chr8_1:89327867-89327886 None:intergenic 25.0%
!!! TTACTTTTAGAAATCACCAA+AGG - chr8_1:89327868-89327887 None:intergenic 25.0%
! GTAAATTGGCTAATGAATAT+TGG - chr8_1:89328026-89328045 None:intergenic 25.0%
!! CTCTCTTATTTATAAACTCA+AGG + chr8_1:89328124-89328143 Msa1224380:intron 25.0%
! ATGCTATAGAAAAAAACACT+TGG + chr8_1:89328258-89328277 Msa1224380:intron 25.0%
! CAACTTTCAATTTGGTATAA+TGG - chr8_1:89328307-89328326 None:intergenic 25.0%
! CTGTATAATTGACAACAAAT+AGG + chr8_1:89328470-89328489 Msa1224380:intron 25.0%
!! ACAGTGAAAACTAATTTTCT+TGG + chr8_1:89328527-89328546 Msa1224380:intron 25.0%
!! AAAACTAATTTTCTTGGTCA+AGG + chr8_1:89328533-89328552 Msa1224380:intron 25.0%
! AACAACTGATTAGAGAATAT+AGG - chr8_1:89329000-89329019 None:intergenic 25.0%
! AATGTTAAGATCATATTCCT+TGG - chr8_1:89329064-89329083 None:intergenic 25.0%
!! TGGTTCCTCATTTTATTATT+TGG + chr8_1:89329400-89329419 Msa1224380:CDS 25.0%
! TGCTTCCAAATAATAAAATG+AGG - chr8_1:89329408-89329427 None:intergenic 25.0%
!! CATTTTATTATTTGGAAGCA+TGG + chr8_1:89329408-89329427 Msa1224380:CDS 25.0%
!!! AACTTGCTCTTTAAGATTTA+TGG + chr8_1:89329756-89329775 Msa1224380:CDS 25.0%
!!! ACTTGCTCTTTAAGATTTAT+GGG + chr8_1:89329757-89329776 Msa1224380:CDS 25.0%
! ATAACAAAAGAGTCTAAACT+AGG - chr8_1:89329896-89329915 None:intergenic 25.0%
!! ATTTTGAATTTCCAAATAGC+TGG + chr8_1:89329949-89329968 Msa1224380:intron 25.0%
! ATTTGATGCATCTGTTATAT+GGG + chr8_1:89330102-89330121 Msa1224380:CDS 25.0%
! AAATCTACCCTAATAAGAAA+TGG + chr8_1:89330233-89330252 Msa1224380:CDS 25.0%
! AACATACCAGTTATATCTTA+TGG + chr8_1:89330268-89330287 Msa1224380:CDS 25.0%
! ATATAATTATGTTCTATCCG+CGG + chr8_1:89330399-89330418 Msa1224380:CDS 25.0%
!!! TTACTTGTTTTTGCTTTTAG+GGG + chr8_1:89330616-89330635 Msa1224380:three_prime_UTR 25.0%
! CATAATAATTGCTAAGCAAT+TGG - chr8_1:89330692-89330711 None:intergenic 25.0%
!!! TTTTTTACCTGCCTTATTTA+TGG + chr8_1:89330757-89330776 Msa1224380:three_prime_UTR 25.0%
! AATATATCCATAAATAAGGC+AGG - chr8_1:89330767-89330786 None:intergenic 25.0%
TCTTCTTCTCTTATCTTCAA+TGG + chr8_1:89326503-89326522 Msa1224380:exon 30.0%
TTGCATAAGAATAGCAGAAA+TGG - chr8_1:89326742-89326761 None:intergenic 30.0%
TCTTCCAATTGGAAAATTCA+TGG + chr8_1:89326770-89326789 Msa1224380:CDS 30.0%
!!! AAGAGTTTAACTTTTTTGGG+TGG + chr8_1:89326811-89326830 Msa1224380:CDS 30.0%
ACATGCTCCTTCATATTAAA+CGG - chr8_1:89326858-89326877 None:intergenic 30.0%
!!! ATCACTATTTTTGCTAACTG+TGG + chr8_1:89326882-89326901 Msa1224380:CDS 30.0%
CATAATAGTAATAGCACCAA+TGG - chr8_1:89326937-89326956 None:intergenic 30.0%
AAAGAAAAAAAGAACCTGAG+TGG - chr8_1:89327015-89327034 None:intergenic 30.0%
GATGCAGAATATATAATTGC+AGG + chr8_1:89327277-89327296 Msa1224380:intron 30.0%
! GTAAATTGAGTTGCAGATAT+TGG + chr8_1:89327680-89327699 Msa1224380:intron 30.0%
AACGTAATATGGAAGAAAAG+GGG - chr8_1:89327809-89327828 None:intergenic 30.0%
TAGTCAATCACAAACTTGAT+TGG - chr8_1:89328219-89328238 None:intergenic 30.0%
TGAAAGTTGTAAATATGTCG+TGG + chr8_1:89328318-89328337 Msa1224380:intron 30.0%
TAATTGACAACAAATAGGCA+AGG + chr8_1:89328475-89328494 Msa1224380:intron 30.0%
AATCATCAAAAGGCTTTACA+AGG + chr8_1:89328650-89328669 Msa1224380:CDS 30.0%
AATATCACAGCACAACAAAT+TGG + chr8_1:89328784-89328803 Msa1224380:CDS 30.0%
ATTGATGCATACAACAAGTA+TGG + chr8_1:89329081-89329100 Msa1224380:CDS 30.0%
! ATCAGGTTTTGCAAGATTTA+CGG + chr8_1:89329143-89329162 Msa1224380:CDS 30.0%
AAATAATGCTACATGAGTGA+GGG - chr8_1:89329172-89329191 None:intergenic 30.0%
ACTCATGTAGCATTATTTCA+TGG + chr8_1:89329174-89329193 Msa1224380:CDS 30.0%
! CTTTAGTAATGGCTTTTGTT+TGG + chr8_1:89329437-89329456 Msa1224380:CDS 30.0%
!! AATGGCTTTTGTTTGGAAAA+CGG + chr8_1:89329444-89329463 Msa1224380:CDS 30.0%
! AGAAAAGTGTAGATTATAGG+TGG - chr8_1:89329590-89329609 None:intergenic 30.0%
ATTATTGCACAGTTCATGAT+CGG + chr8_1:89329705-89329724 Msa1224380:CDS 30.0%
TTAAAGAGCAAGTTTGCAAT+TGG - chr8_1:89329750-89329769 None:intergenic 30.0%
TCAAATGTCACTCTGTATTT+GGG - chr8_1:89330088-89330107 None:intergenic 30.0%
ATCAAATGTCACTCTGTATT+TGG - chr8_1:89330089-89330108 None:intergenic 30.0%
CATTTGATGCATCTGTTATA+TGG + chr8_1:89330101-89330120 Msa1224380:CDS 30.0%
TTTGATGCATCTGTTATATG+GGG + chr8_1:89330103-89330122 Msa1224380:CDS 30.0%
AGAATAACCATACAAGGTTT+CGG - chr8_1:89330171-89330190 None:intergenic 30.0%
AAACCTTGTATGGTTATTCT+TGG + chr8_1:89330171-89330190 Msa1224380:CDS 30.0%
GAGGAATCCATTTCTTATTA+GGG - chr8_1:89330243-89330262 None:intergenic 30.0%
AGAGGAATCCATTTCTTATT+AGG - chr8_1:89330244-89330263 None:intergenic 30.0%
ATAACTGGTATGTTTATCAG+AGG - chr8_1:89330262-89330281 None:intergenic 30.0%
GCAAAACCATAAGATATAAC+TGG - chr8_1:89330277-89330296 None:intergenic 30.0%
!! GTTATATCTTATGGTTTTGC+TGG + chr8_1:89330277-89330296 Msa1224380:CDS 30.0%
AAAGTAGTTGAAGATCATTC+CGG - chr8_1:89330347-89330366 None:intergenic 30.0%
GCAGGTAAAAAAAGACAAAA+AGG - chr8_1:89330749-89330768 None:intergenic 30.0%
!! TGACGTCTGAAATACATTTT+AGG + chr8_1:89330813-89330832 Msa1224380:three_prime_UTR 30.0%
!!! AATTCATGGTTTTTGGTAGT+TGG + chr8_1:89330843-89330862 Msa1224380:three_prime_UTR 30.0%
TTCTTGTTCTGTCAAATGAC+AGG - chr8_1:89326393-89326412 None:intergenic 35.0%
AAGTCATGACTGGAATAGAA+GGG - chr8_1:89326635-89326654 None:intergenic 35.0%
AAAGTCATGACTGGAATAGA+AGG - chr8_1:89326636-89326655 None:intergenic 35.0%
TAATTCCCAGAAACCATGAA+CGG - chr8_1:89326659-89326678 None:intergenic 35.0%
AGAATAGCAGAAATGGTTAG+TGG - chr8_1:89326735-89326754 None:intergenic 35.0%
TTAAGACGATGAATAGAGCA+AGG - chr8_1:89326992-89327011 None:intergenic 35.0%
!! TGGTCAAAGATTTTTGGACA+AGG + chr8_1:89327120-89327139 Msa1224380:intron 35.0%
TGCAGGCAATTGTTTATGTT+TGG + chr8_1:89327294-89327313 Msa1224380:intron 35.0%
GCAGGCAATTGTTTATGTTT+GGG + chr8_1:89327295-89327314 Msa1224380:intron 35.0%
TTGTTATCTGCAAGTCTATC+TGG + chr8_1:89327491-89327510 Msa1224380:intron 35.0%
ACGTATTAGTGTCTTTGTGT+TGG - chr8_1:89327894-89327913 None:intergenic 35.0%
AACACAAAGACACTAATACG+TGG + chr8_1:89327893-89327912 Msa1224380:intron 35.0%
AACCACACATTTCATTGTCT+TGG + chr8_1:89327956-89327975 Msa1224380:intron 35.0%
AACACTTGGTTTAACCTTAG+TGG + chr8_1:89328272-89328291 Msa1224380:intron 35.0%
ACACTTGGTTTAACCTTAGT+GGG + chr8_1:89328273-89328292 Msa1224380:intron 35.0%
! ATATCACAAGCTGTGTTGTT+CGG + chr8_1:89328371-89328390 Msa1224380:intron 35.0%
! CACTGTTGCATAAGTTCTTT+TGG - chr8_1:89328513-89328532 None:intergenic 35.0%
CCATGAGAAGAATGTTAAGA+CGG - chr8_1:89328743-89328762 None:intergenic 35.0%
TGTTGTGCTGTGATATTATG+TGG - chr8_1:89328781-89328800 None:intergenic 35.0%
ACATTAACAATGGAAGTCCA+TGG - chr8_1:89328895-89328914 None:intergenic 35.0%
TGGACTTCCATTGTTAATGT+TGG + chr8_1:89328895-89328914 Msa1224380:CDS 35.0%
GGACTTCCATTGTTAATGTT+GGG + chr8_1:89328896-89328915 Msa1224380:CDS 35.0%
GACTTCCATTGTTAATGTTG+GGG + chr8_1:89328897-89328916 Msa1224380:CDS 35.0%
TAATTCTACCCGTATGTTAC+TGG + chr8_1:89328944-89328963 Msa1224380:CDS 35.0%
TTAAACCTCCAGTAACATAC+GGG - chr8_1:89328955-89328974 None:intergenic 35.0%
GTTAAACCTCCAGTAACATA+CGG - chr8_1:89328956-89328975 None:intergenic 35.0%
! GGTTTAACACTTTTGATGCT+AGG + chr8_1:89328968-89328987 Msa1224380:CDS 35.0%
GAAATAATGCTACATGAGTG+AGG - chr8_1:89329173-89329192 None:intergenic 35.0%
ATGTAGCATTATTTCATGGC+AGG + chr8_1:89329178-89329197 Msa1224380:CDS 35.0%
CTCAATATGTCTCTGCATAA+AGG - chr8_1:89329298-89329317 None:intergenic 35.0%
AGACAGAGTAAATCAGCAAT+GGG + chr8_1:89329316-89329335 Msa1224380:CDS 35.0%
!! AACGTAAAAGTTGATGTGCA+TGG + chr8_1:89329340-89329359 Msa1224380:CDS 35.0%
CTTATAAGCAAGTACCAGAA+TGG + chr8_1:89329377-89329396 Msa1224380:CDS 35.0%
! TTTGTTGTAACTCTCCCAAT+CGG + chr8_1:89329514-89329533 Msa1224380:CDS 35.0%
TATTGAATGGAGTTAGTACC+TGG - chr8_1:89329561-89329580 None:intergenic 35.0%
TAGGTGGCAGAAATATTGAA+TGG - chr8_1:89329574-89329593 None:intergenic 35.0%
AACATGAGTGTTTCCTATGA+TGG + chr8_1:89329656-89329675 Msa1224380:intron 35.0%
TGTGCAATAATGTCATATCC+AGG - chr8_1:89329696-89329715 None:intergenic 35.0%
TTATTGCACAGTTCATGATC+GGG + chr8_1:89329706-89329725 Msa1224380:CDS 35.0%
TTCTTGCAAGATCTCAAACT+TGG + chr8_1:89329807-89329826 Msa1224380:CDS 35.0%
TCTTGCAAGATCTCAAACTT+GGG + chr8_1:89329808-89329827 Msa1224380:CDS 35.0%
TTGAATTTCCAAATAGCTGG+TGG + chr8_1:89329952-89329971 Msa1224380:intron 35.0%
TGAATTTCCAAATAGCTGGT+GGG + chr8_1:89329953-89329972 Msa1224380:intron 35.0%
TAGCATAAAGGACATTTGCA+TGG + chr8_1:89330027-89330046 Msa1224380:CDS 35.0%
TCTGTTATATGGGGTTTGAT+CGG + chr8_1:89330112-89330131 Msa1224380:CDS 35.0%
CAACCAAGAATAACCATACA+AGG - chr8_1:89330177-89330196 None:intergenic 35.0%
CTTGTATGGTTATTCTTGGT+TGG + chr8_1:89330175-89330194 Msa1224380:CDS 35.0%
! ATTTTGCTAAACACCCAAAC+AGG - chr8_1:89330217-89330236 None:intergenic 35.0%
GGCTTTCTCTATTAGAATAC+AGG - chr8_1:89330574-89330593 None:intergenic 35.0%
AAATAGAGCCTAAGTCAACT+AGG - chr8_1:89330595-89330614 None:intergenic 35.0%
! TAGGTTTGGAGTATACCAAA+AGG + chr8_1:89330650-89330669 Msa1224380:three_prime_UTR 35.0%
! TATTTAGTCCCTTCACCTTT+TGG - chr8_1:89330668-89330687 None:intergenic 35.0%
!! ATGCTTCTTGCTTGTTATCA+CGG + chr8_1:89330715-89330734 Msa1224380:three_prime_UTR 35.0%
! TGTCAAATGACAGGTTGGAA+TGG - chr8_1:89326384-89326403 None:intergenic 40.0%
TGTTCTGTCAAATGACAGGT+TGG - chr8_1:89326389-89326408 None:intergenic 40.0%
!!! TTTGCTGCTTTTTCAGTGTC+TGG - chr8_1:89326546-89326565 None:intergenic 40.0%
GACACTGAAAAAGCAGCAAA+CGG + chr8_1:89326546-89326565 Msa1224380:CDS 40.0%
ACGAGAGCTACTTCTTCAAT+TGG - chr8_1:89326594-89326613 None:intergenic 40.0%
ACTTTCCGTTCATGGTTTCT+GGG + chr8_1:89326651-89326670 Msa1224380:CDS 40.0%
CAAATCGCTGTTCTTCCAAT+TGG + chr8_1:89326759-89326778 Msa1224380:CDS 40.0%
TCCTGGTCCGTTTAATATGA+AGG + chr8_1:89326848-89326867 Msa1224380:CDS 40.0%
TCCTTCATATTAAACGGACC+AGG - chr8_1:89326852-89326871 None:intergenic 40.0%
ATTCATCGTCTTAACCACTC+AGG + chr8_1:89326998-89327017 Msa1224380:CDS 40.0%
!! TGGTTGATGACGAAAAAGTG+TGG + chr8_1:89327539-89327558 Msa1224380:intron 40.0%
TAAAGAGAGAGACTTGTGCA+AGG - chr8_1:89327773-89327792 None:intergenic 40.0%
TTGCACAAGTCTCTCTCTTT+AGG + chr8_1:89327772-89327791 Msa1224380:CDS 40.0%
CACCAAGACAATGAAATGTG+TGG - chr8_1:89327961-89327980 None:intergenic 40.0%
! CAGTTTTTCCTCATTGCCAT+GGG + chr8_1:89328676-89328695 Msa1224380:CDS 40.0%
TTCTTGTATTATGCACTCCC+CGG + chr8_1:89328706-89328725 Msa1224380:CDS 40.0%
TAAGACGGTGAAAAGATAGC+CGG - chr8_1:89328728-89328747 None:intergenic 40.0%
CCGTCTTAACATTCTTCTCA+TGG + chr8_1:89328740-89328759 Msa1224380:CDS 40.0%
ACAGCACAACAAATTGGATC+AGG + chr8_1:89328790-89328809 Msa1224380:CDS 40.0%
CAAATTGGATCAGGTTACCA+TGG + chr8_1:89328799-89328818 Msa1224380:CDS 40.0%
TTGGTGCATTCACACTTGAT+TGG + chr8_1:89328830-89328849 Msa1224380:CDS 40.0%
TGGTGCATTCACACTTGATT+GGG + chr8_1:89328831-89328850 Msa1224380:CDS 40.0%
GCTGGAATTTCAGCTTATCA+TGG + chr8_1:89328853-89328872 Msa1224380:CDS 40.0%
TCCATTGTTAATGTTGGGGT+TGG + chr8_1:89328901-89328920 Msa1224380:CDS 40.0%
TCCAACCCCAACATTAACAA+TGG - chr8_1:89328905-89328924 None:intergenic 40.0%
AATCAGTTGTTCACGTCAAG+TGG + chr8_1:89329009-89329028 Msa1224380:CDS 40.0%
CACGACAAAGATCTTAACCA+AGG + chr8_1:89329044-89329063 Msa1224380:CDS 40.0%
TTCGCATTGTCTATTGGATC+AGG + chr8_1:89329126-89329145 Msa1224380:CDS 40.0%
AGCATTATTTCATGGCAGGT+AGG + chr8_1:89329182-89329201 Msa1224380:intron 40.0%
GAGACAGAGTAAATCAGCAA+TGG + chr8_1:89329315-89329334 Msa1224380:CDS 40.0%
ATAAGCAAGTACCAGAATGG+TGG + chr8_1:89329380-89329399 Msa1224380:CDS 40.0%
AAAATGAGGAACCACCATTC+TGG - chr8_1:89329394-89329413 None:intergenic 40.0%
CATGGCGCTATCTTTAGTAA+TGG + chr8_1:89329426-89329445 Msa1224380:CDS 40.0%
! TCTTTTGCTCGTAAGCAATG+AGG + chr8_1:89329607-89329626 Msa1224380:intron 40.0%
! AAGTTTGCAATTGGTTTCCC+AGG - chr8_1:89329741-89329760 None:intergenic 40.0%
GTGGATGTTGGATAGCATAA+AGG + chr8_1:89330015-89330034 Msa1224380:CDS 40.0%
GATTGTACCGAAACCTTGTA+TGG + chr8_1:89330161-89330180 Msa1224380:CDS 40.0%
! AGAGAAAGCCTAGTTGACTT+AGG + chr8_1:89330584-89330603 Msa1224380:three_prime_UTR 40.0%
!! TGTTTTTGCTTTTAGGGGTG+TGG + chr8_1:89330621-89330640 Msa1224380:three_prime_UTR 40.0%
TGGTATACTCCAAACCTAAC+TGG - chr8_1:89330648-89330667 None:intergenic 40.0%
TGGAGTATACCAAAAGGTGA+AGG + chr8_1:89330656-89330675 Msa1224380:three_prime_UTR 40.0%
GGAGTATACCAAAAGGTGAA+GGG + chr8_1:89330657-89330676 Msa1224380:three_prime_UTR 40.0%
!!! TGGTTTTTGGTAGTTGGTAC+AGG + chr8_1:89330849-89330868 Msa1224380:three_prime_UTR 40.0%
! GTGTCTGGAGTTGGATTCTT+TGG - chr8_1:89326531-89326550 None:intergenic 45.0%
!!! GCTTTTTCAGTGTCTGGAGT+TGG - chr8_1:89326540-89326559 None:intergenic 45.0%
AATTGGACATCTGTCGTCTG+GGG - chr8_1:89326577-89326596 None:intergenic 45.0%
CAATTGGACATCTGTCGTCT+GGG - chr8_1:89326578-89326597 None:intergenic 45.0%
TCAATTGGACATCTGTCGTC+TGG - chr8_1:89326579-89326598 None:intergenic 45.0%
CATGAACGGAAAGTCATGAC+TGG - chr8_1:89326645-89326664 None:intergenic 45.0%
CAGTCATGACTTTCCGTTCA+TGG + chr8_1:89326643-89326662 Msa1224380:CDS 45.0%
GACTTTCCGTTCATGGTTTC+TGG + chr8_1:89326650-89326669 Msa1224380:CDS 45.0%
! GCGGCCATGAATTTTCCAAT+TGG - chr8_1:89326777-89326796 None:intergenic 45.0%
AAACTCTTTCGTGGGAAGAG+TGG - chr8_1:89326799-89326818 None:intergenic 45.0%
GCTAACTGTGGTGTTTCTCA+AGG + chr8_1:89326894-89326913 Msa1224380:CDS 45.0%
AACTGTGGTGTTTCTCAAGG+TGG + chr8_1:89326897-89326916 Msa1224380:CDS 45.0%
!! TTTGTCTTTGAGACCCGTGA+AGG + chr8_1:89327391-89327410 Msa1224380:intron 45.0%
GAGTTGCAGATATTGGGCTA+TGG + chr8_1:89327687-89327706 Msa1224380:intron 45.0%
TGCAGATATTGGGCTATGGA+TGG + chr8_1:89327691-89327710 Msa1224380:intron 45.0%
GCAGATATTGGGCTATGGAT+GGG + chr8_1:89327692-89327711 Msa1224380:intron 45.0%
ATGGCCACCACATTTCAACA+GGG - chr8_1:89327746-89327765 None:intergenic 45.0%
GAGACTTGTGCAAGGTTTGA+TGG - chr8_1:89327765-89327784 None:intergenic 45.0%
AGCGCATCTTCACTACTGAA+AGG + chr8_1:89328345-89328364 Msa1224380:intron 45.0%
! ATGGAGTGCTCTGTAGCATA+AGG - chr8_1:89328617-89328636 None:intergenic 45.0%
! GCAGTTTTTCCTCATTGCCA+TGG + chr8_1:89328675-89328694 Msa1224380:CDS 45.0%
ATACAAGAAGCTAACGCCCA+TGG - chr8_1:89328695-89328714 None:intergenic 45.0%
AAGACGGTGAAAAGATAGCC+GGG - chr8_1:89328727-89328746 None:intergenic 45.0%
!! TCTCATGGATTTGCTACGCA+TGG + chr8_1:89328755-89328774 Msa1224380:CDS 45.0%
GGTTACCATGGACTTGGAAT+TGG + chr8_1:89328811-89328830 Msa1224380:CDS 45.0%
ATGCACCAATTCCAAGTCCA+TGG - chr8_1:89328819-89328838 None:intergenic 45.0%
TTCTACCCGTATGTTACTGG+AGG + chr8_1:89328947-89328966 Msa1224380:CDS 45.0%
ACAATGCGAAGAGAGGACTA+AGG - chr8_1:89329116-89329135 None:intergenic 45.0%
CCAATAGACAATGCGAAGAG+AGG - chr8_1:89329123-89329142 None:intergenic 45.0%
CCTCTCTTCGCATTGTCTAT+TGG + chr8_1:89329120-89329139 Msa1224380:CDS 45.0%
AAACGGATGTGCAACTTCCA+TGG + chr8_1:89329461-89329480 Msa1224380:CDS 45.0%
! TTGCTTGGATGACACCGATT+GGG - chr8_1:89329531-89329550 None:intergenic 45.0%
GAATGGAGTTAGTACCTGGT+TGG - chr8_1:89329557-89329576 None:intergenic 45.0%
AGCAATGAGGCGAAAGCAAT+AGG + chr8_1:89329620-89329639 Msa1224380:intron 45.0%
TGCTGCAAGGTAACCATCAT+AGG - chr8_1:89329672-89329691 None:intergenic 45.0%
! TTGCAATTGGTTTCCCAGGA+AGG - chr8_1:89329737-89329756 None:intergenic 45.0%
! CAAGAAAGAGAGTGCATGGA+CGG - chr8_1:89329793-89329812 None:intergenic 45.0%
! CTTGCAAGAAAGAGAGTGCA+TGG - chr8_1:89329797-89329816 None:intergenic 45.0%
TGTGCTGTATACATGCATCG+CGG - chr8_1:89329852-89329871 None:intergenic 45.0%
TAGTGTTCCCACCAGCTATT+TGG - chr8_1:89329963-89329982 None:intergenic 45.0%
! CTGTATTTGGGACAAGTCCA+AGG - chr8_1:89330076-89330095 None:intergenic 45.0%
AGTGTTGCCAGTTCCTGTTT+GGG + chr8_1:89330201-89330220 Msa1224380:CDS 45.0%
CTAAACACCCAAACAGGAAC+TGG - chr8_1:89330211-89330230 None:intergenic 45.0%
ATGTTAGTTGGAGTTGCAGG+TGG - chr8_1:89330307-89330326 None:intergenic 45.0%
GCAATGTTAGTTGGAGTTGC+AGG - chr8_1:89330310-89330329 None:intergenic 45.0%
CTCCAACTAACATTGCAAGC+TGG + chr8_1:89330314-89330333 Msa1224380:CDS 45.0%
AGCCAGCTTGCAATGTTAGT+TGG - chr8_1:89330319-89330338 None:intergenic 45.0%
ATTGCAAGCTGGCTATTGAC+CGG + chr8_1:89330325-89330344 Msa1224380:CDS 45.0%
ATTTCTGCCACCAACGTTTG+TGG - chr8_1:89330381-89330400 None:intergenic 45.0%
TTCTTCGCTCTGCAAAATGC+AGG + chr8_1:89330460-89330479 Msa1224380:CDS 45.0%
ATGCAGGCCATACTCTCAAA+TGG + chr8_1:89330476-89330495 Msa1224380:CDS 45.0%
AGGCCATACTCTCAAATGGT+GGG + chr8_1:89330480-89330499 Msa1224380:CDS 45.0%
TTCCCCACCATTTGAGAGTA+TGG - chr8_1:89330486-89330505 None:intergenic 45.0%
! CAAATGGTGGGGAACTGAAT+TGG + chr8_1:89330492-89330511 Msa1224380:CDS 45.0%
CAACCATCAACCACAATTCC+TGG - chr8_1:89330550-89330569 None:intergenic 45.0%
!! CTTCTTGCTTGTTATCACGG+AGG + chr8_1:89330718-89330737 Msa1224380:three_prime_UTR 45.0%
TTCACAATGCGTCCTCTCAG+CGG - chr8_1:89326345-89326364 None:intergenic 50.0%
ATTGGACATCTGTCGTCTGG+GGG - chr8_1:89326576-89326595 None:intergenic 50.0%
!! TAGAAGGGTCGTCGGTTTCA+GGG - chr8_1:89326620-89326639 None:intergenic 50.0%
!! ATAGAAGGGTCGTCGGTTTC+AGG - chr8_1:89326621-89326640 None:intergenic 50.0%
GACTGGAATAGAAGGGTCGT+CGG - chr8_1:89326628-89326647 None:intergenic 50.0%
TGGCGTTTCACGTTGAATCC+TGG + chr8_1:89326831-89326850 Msa1224380:CDS 50.0%
TGTGGTGTTTCTCAAGGTGG+TGG + chr8_1:89326900-89326919 Msa1224380:CDS 50.0%
! GGTGGTGATGCTTACTCCAT+TGG + chr8_1:89326918-89326937 Msa1224380:CDS 50.0%
ACGACCACGTTCAACCTTCA+CGG - chr8_1:89327408-89327427 None:intergenic 50.0%
ATATTGGGCTATGGATGGGC+TGG + chr8_1:89327696-89327715 Msa1224380:CDS 50.0%
! TATTGGGCTATGGATGGGCT+GGG + chr8_1:89327697-89327716 Msa1224380:CDS 50.0%
!! TGGGATTCTGAGGAGGTATC+TGG + chr8_1:89327716-89327735 Msa1224380:CDS 50.0%
!! GATTCTGAGGAGGTATCTGG+TGG + chr8_1:89327719-89327738 Msa1224380:CDS 50.0%
! TGGTGGACCCTGTTGAAATG+TGG + chr8_1:89327736-89327755 Msa1224380:CDS 50.0%
TGGACCCTGTTGAAATGTGG+TGG + chr8_1:89327739-89327758 Msa1224380:CDS 50.0%
GATGGCCACCACATTTCAAC+AGG - chr8_1:89327747-89327766 None:intergenic 50.0%
AATGGCTGTTGTGCCCACTA+AGG - chr8_1:89328289-89328308 None:intergenic 50.0%
AGACGGTGAAAAGATAGCCG+GGG - chr8_1:89328726-89328745 None:intergenic 50.0%
GGATCAGGTTACCATGGACT+TGG + chr8_1:89328805-89328824 Msa1224380:CDS 50.0%
GCATTCACACTTGATTGGGC+TGG + chr8_1:89328835-89328854 Msa1224380:CDS 50.0%
AAGTCCATGGTGCAACAAGG+GGG - chr8_1:89328882-89328901 None:intergenic 50.0%
GAAGTCCATGGTGCAACAAG+GGG - chr8_1:89328883-89328902 None:intergenic 50.0%
GGAAGTCCATGGTGCAACAA+GGG - chr8_1:89328884-89328903 None:intergenic 50.0%
TGGAAGTCCATGGTGCAACA+AGG - chr8_1:89328885-89328904 None:intergenic 50.0%
GGATGTGCAACTTCCATGGT+GGG + chr8_1:89329465-89329484 Msa1224380:CDS 50.0%
GATGTGCAACTTCCATGGTG+GGG + chr8_1:89329466-89329485 Msa1224380:CDS 50.0%
! TGGGGCATGCTCTTTGCTTT+TGG + chr8_1:89329484-89329503 Msa1224380:CDS 50.0%
GTTGCTTGGATGACACCGAT+TGG - chr8_1:89329532-89329551 None:intergenic 50.0%
CATCCAAGCAACTACCAACC+AGG + chr8_1:89329540-89329559 Msa1224380:CDS 50.0%
!! GTACCTGGTTGGTAGTTGCT+TGG - chr8_1:89329546-89329565 None:intergenic 50.0%
ATGGTTACCTTGCAGCAACC+TGG + chr8_1:89329675-89329694 Msa1224380:intron 50.0%
GTCATATCCAGGTTGCTGCA+AGG - chr8_1:89329685-89329704 None:intergenic 50.0%
ATGATCGGGTATCTCCTTCC+TGG + chr8_1:89329720-89329739 Msa1224380:CDS 50.0%
TGATCGGGTATCTCCTTCCT+GGG + chr8_1:89329721-89329740 Msa1224380:CDS 50.0%
TGCTGTATACATGCATCGCG+GGG - chr8_1:89329850-89329869 None:intergenic 50.0%
GTGCTGTATACATGCATCGC+GGG - chr8_1:89329851-89329870 None:intergenic 50.0%
GCGATGCATGTATACAGCAC+AGG + chr8_1:89329851-89329870 Msa1224380:CDS 50.0%
TGGAGTGGTGAACCTTTCAG+TGG + chr8_1:89329988-89330007 Msa1224380:CDS 50.0%
TGGTGAACCTTTCAGTGGCT+TGG + chr8_1:89329993-89330012 Msa1224380:CDS 50.0%
! TGAACCTTTCAGTGGCTTGG+TGG + chr8_1:89329996-89330015 Msa1224380:CDS 50.0%
ACATCCACCAAGCCACTGAA+AGG - chr8_1:89330003-89330022 None:intergenic 50.0%
!! TTCAGTGGCTTGGTGGATGT+TGG + chr8_1:89330003-89330022 Msa1224380:CDS 50.0%
AAGCTCACCATGACAGTCCT+TGG + chr8_1:89330056-89330075 Msa1224380:CDS 50.0%
GACAAGTCCAAGGACTGTCA+TGG - chr8_1:89330066-89330085 None:intergenic 50.0%
AGGTTTCGGTACAATCCACC+TGG - chr8_1:89330157-89330176 None:intergenic 50.0%
CAGTGTTGCCAGTTCCTGTT+TGG + chr8_1:89330200-89330219 Msa1224380:CDS 50.0%
TGTTCCGCTTCCACAAACGT+TGG + chr8_1:89330368-89330387 Msa1224380:CDS 50.0%
! TGATGCAGGCACGGCTTTTA+TGG + chr8_1:89330426-89330445 Msa1224380:CDS 50.0%
! GATGCAGGCACGGCTTTTAT+GGG + chr8_1:89330427-89330446 Msa1224380:CDS 50.0%
CAGGCCATACTCTCAAATGG+TGG + chr8_1:89330479-89330498 Msa1224380:CDS 50.0%
GGCCATACTCTCAAATGGTG+GGG + chr8_1:89330481-89330500 Msa1224380:CDS 50.0%
TGAATTGGACCATTGCCCGT+TGG + chr8_1:89330507-89330526 Msa1224380:CDS 50.0%
CCACAATTCCTGGAGCAGTT+GGG - chr8_1:89330540-89330559 None:intergenic 50.0%
ACCACAATTCCTGGAGCAGT+TGG - chr8_1:89330541-89330560 None:intergenic 50.0%
GCTCCAGGAATTGTGGTTGA+TGG + chr8_1:89330544-89330563 Msa1224380:CDS 50.0%
! TTTAGGGGTGTGGACCAGTT+AGG + chr8_1:89330631-89330650 Msa1224380:three_prime_UTR 50.0%
CTCTTTCGTGGGAAGAGTGG+CGG - chr8_1:89326796-89326815 None:intergenic 55.0%
AGACCCGTGAAGGTTGAACG+TGG + chr8_1:89327401-89327420 Msa1224380:intron 55.0%
CGACCACGTTCAACCTTCAC+GGG - chr8_1:89327407-89327426 None:intergenic 55.0%
!! ATGGATGGGCTGGGATTCTG+AGG + chr8_1:89327706-89327725 Msa1224380:CDS 55.0%
AGCTAACGCCCATGGCAATG+AGG - chr8_1:89328687-89328706 None:intergenic 55.0%
CGGATGTGCAACTTCCATGG+TGG + chr8_1:89329464-89329483 Msa1224380:CDS 55.0%
GCTGTATACATGCATCGCGG+GGG - chr8_1:89329849-89329868 None:intergenic 55.0%
CTGGTGGGAACACTAGTTGC+TGG + chr8_1:89329968-89329987 Msa1224380:CDS 55.0%
GGGAACACTAGTTGCTGGAG+TGG + chr8_1:89329973-89329992 Msa1224380:CDS 55.0%
ATCGGACCGAAGCGGCTATT+CGG + chr8_1:89330130-89330149 Msa1224380:CDS 55.0%
TCCGCTTCCACAAACGTTGG+TGG + chr8_1:89330371-89330390 Msa1224380:CDS 55.0%
GCCACCAACGTTTGTGGAAG+CGG - chr8_1:89330375-89330394 None:intergenic 55.0%
CAGTTGGGCAAGTAGCCAAC+GGG - chr8_1:89330525-89330544 None:intergenic 55.0%
GCAGTTGGGCAAGTAGCCAA+CGG - chr8_1:89330526-89330545 None:intergenic 55.0%
CCCAACTGCTCCAGGAATTG+TGG + chr8_1:89330537-89330556 Msa1224380:CDS 55.0%
GGGTGTGGACCAGTTAGGTT+TGG + chr8_1:89330636-89330655 Msa1224380:three_prime_UTR 55.0%
!! GATGGGCTGGGATTCTGAGG+AGG + chr8_1:89327709-89327728 Msa1224380:CDS 60.0%
GAAGCCCCCTTGTTGCACCA+TGG + chr8_1:89328875-89328894 Msa1224380:CDS 60.0%
! GCAAAGAGCATGCCCCACCA+TGG - chr8_1:89329481-89329500 None:intergenic 60.0%
GGGGTTTGATCGGACCGAAG+CGG + chr8_1:89330122-89330141 Msa1224380:CDS 60.0%
CCTGGTCCGAATAGCCGCTT+CGG - chr8_1:89330139-89330158 None:intergenic 60.0%
AAGCGGCTATTCGGACCAGG+TGG + chr8_1:89330139-89330158 Msa1224380:CDS 60.0%
GGCAAGTAGCCAACGGGCAA+TGG - chr8_1:89330519-89330538 None:intergenic 60.0%
GCTACTTGCCCAACTGCTCC+AGG + chr8_1:89330529-89330548 Msa1224380:CDS 60.0%
CCGAAGCGGCTATTCGGACC+AGG + chr8_1:89330136-89330155 Msa1224380:CDS 65.0%
CTATCCGCGGCGCTTGATGC+AGG + chr8_1:89330412-89330431 Msa1224380:CDS 65.0%
! CGTGCCTGCATCAAGCGCCG+CGG - chr8_1:89330419-89330438 None:intergenic 70.0%
CGCGGCGCTTGATGCAGGCA+CGG + chr8_1:89330417-89330436 Msa1224380:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 89326340 89330913 89326340 ID=Msa1224380;Name=Msa1224380
chr8_1 mRNA 89326340 89330913 89326340 ID=Msa1224380-mRNA-1;Parent=Msa1224380;Name=Msa1224380-mRNA-1;_AED=0.04;_eAED=0.04;_QI=182|1|1|1|1|1|6|331|740
chr8_1 exon 89326340 89327019 89326340 ID=Msa1224380-mRNA-1:exon:32404;Parent=Msa1224380-mRNA-1
chr8_1 exon 89327696 89327793 89327696 ID=Msa1224380-mRNA-1:exon:32405;Parent=Msa1224380-mRNA-1
chr8_1 exon 89328627 89329199 89328627 ID=Msa1224380-mRNA-1:exon:32406;Parent=Msa1224380-mRNA-1
chr8_1 exon 89329306 89329561 89329306 ID=Msa1224380-mRNA-1:exon:32407;Parent=Msa1224380-mRNA-1
chr8_1 exon 89329690 89329872 89329690 ID=Msa1224380-mRNA-1:exon:32408;Parent=Msa1224380-mRNA-1
chr8_1 exon 89329968 89330913 89329968 ID=Msa1224380-mRNA-1:exon:32409;Parent=Msa1224380-mRNA-1
chr8_1 five_prime_UTR 89326340 89326521 89326340 ID=Msa1224380-mRNA-1:five_prime_utr;Parent=Msa1224380-mRNA-1
chr8_1 CDS 89326522 89327019 89326522 ID=Msa1224380-mRNA-1:cds;Parent=Msa1224380-mRNA-1
chr8_1 CDS 89327696 89327793 89327696 ID=Msa1224380-mRNA-1:cds;Parent=Msa1224380-mRNA-1
chr8_1 CDS 89328627 89329199 89328627 ID=Msa1224380-mRNA-1:cds;Parent=Msa1224380-mRNA-1
chr8_1 CDS 89329306 89329561 89329306 ID=Msa1224380-mRNA-1:cds;Parent=Msa1224380-mRNA-1
chr8_1 CDS 89329690 89329872 89329690 ID=Msa1224380-mRNA-1:cds;Parent=Msa1224380-mRNA-1
chr8_1 CDS 89329968 89330582 89329968 ID=Msa1224380-mRNA-1:cds;Parent=Msa1224380-mRNA-1
chr8_1 three_prime_UTR 89330583 89330913 89330583 ID=Msa1224380-mRNA-1:three_prime_utr;Parent=Msa1224380-mRNA-1
Gene Sequence

>Msa1224380

ATGGCGCCAAAGAATCCAACTCCAGACACTGAAAAAGCAGCAAACGGTGTTCCCCCAGACGACAGATGTCCAATTGAAGAAGTAGCTCTCGTCGTCCCTGAAACCGACGACCCTTCTATTCCAGTCATGACTTTCCGTTCATGGTTTCTGGGAATTACTTCTTGCATCATTCTCATCTTTCTCAACACTTTCTTCACTTTCAGAACTCAACCACTAACCATTTCTGCTATTCTTATGCAAATCGCTGTTCTTCCAATTGGAAAATTCATGGCCGCCACTCTTCCCACGAAAGAGTTTAACTTTTTTGGGTGGCGTTTCACGTTGAATCCTGGTCCGTTTAATATGAAGGAGCATGTTATTATCACTATTTTTGCTAACTGTGGTGTTTCTCAAGGTGGTGGTGATGCTTACTCCATTGGTGCTATTACTATTATGAAAGCTTATTACAAACAATCTCTCAGTTTTCTCCTTGCTCTATTCATCGTCTTAACCACTCAGATATTGGGCTATGGATGGGCTGGGATTCTGAGGAGGTATCTGGTGGACCCTGTTGAAATGTGGTGGCCATCAAACCTTGCACAAGTCTCTCTCTTTAGAGCACTCCATGAAAAAGAGAATAAATCATCAAAAGGCTTTACAAGGATGCAGTTTTTCCTCATTGCCATGGGCGTTAGCTTCTTGTATTATGCACTCCCCGGCTATCTTTTCACCGTCTTAACATTCTTCTCATGGATTTGCTACGCATGGCCACATAATATCACAGCACAACAAATTGGATCAGGTTACCATGGACTTGGAATTGGTGCATTCACACTTGATTGGGCTGGAATTTCAGCTTATCATGGAAGCCCCCTTGTTGCACCATGGACTTCCATTGTTAATGTTGGGGTTGGATTTATCATGTTCATCTATATAATTCTACCCGTATGTTACTGGAGGTTTAACACTTTTGATGCTAGGAAGTTTCCTATATTCTCTAATCAGTTGTTCACGTCAAGTGGACACAAGTATGACACGACAAAGATCTTAACCAAGGAATATGATCTTAACATTGATGCATACAACAAGTATGGCAAGTTATACCTTAGTCCTCTCTTCGCATTGTCTATTGGATCAGGTTTTGCAAGATTTACGGCGACCCTCACTCATGTAGCATTATTTCATGGCAGAGACATATTGAGACAGAGTAAATCAGCAATGGGTAACGTAAAAGTTGATGTGCATGGTAGACTCATGAAAGCTTATAAGCAAGTACCAGAATGGTGGTTCCTCATTTTATTATTTGGAAGCATGGCGCTATCTTTAGTAATGGCTTTTGTTTGGAAAACGGATGTGCAACTTCCATGGTGGGGCATGCTCTTTGCTTTTGGCTTAGCTTTTGTTGTAACTCTCCCAATCGGTGTCATCCAAGCAACTACCAACCAGCAACCTGGATATGACATTATTGCACAGTTCATGATCGGGTATCTCCTTCCTGGGAAACCAATTGCAAACTTGCTCTTTAAGATTTATGGGAGAATCAGCACCGTCCATGCACTCTCTTTCTTGCAAGATCTCAAACTTGGGCACTACATGAAAATTCCCCCGCGATGCATGTATACAGCACAGCTGGTGGGAACACTAGTTGCTGGAGTGGTGAACCTTTCAGTGGCTTGGTGGATGTTGGATAGCATAAAGGACATTTGCATGGATGATAAAGCTCACCATGACAGTCCTTGGACTTGTCCCAAATACAGAGTGACATTTGATGCATCTGTTATATGGGGTTTGATCGGACCGAAGCGGCTATTCGGACCAGGTGGATTGTACCGAAACCTTGTATGGTTATTCTTGGTTGGAGCAGTGTTGCCAGTTCCTGTTTGGGTGTTTAGCAAAATCTACCCTAATAAGAAATGGATTCCTCTGATAAACATACCAGTTATATCTTATGGTTTTGCTGGAATGCCACCTGCAACTCCAACTAACATTGCAAGCTGGCTATTGACCGGAATGATCTTCAACTACTTTGTGTTCCGCTTCCACAAACGTTGGTGGCAGAAATATAATTATGTTCTATCCGCGGCGCTTGATGCAGGCACGGCTTTTATGGGTGTTTTGATTTTCTTCGCTCTGCAAAATGCAGGCCATACTCTCAAATGGTGGGGAACTGAATTGGACCATTGCCCGTTGGCTACTTGCCCAACTGCTCCAGGAATTGTGGTTGATGGTTGTCCTGTATTCTAA
Protein sequence

>Msa1224380

MAPKNPTPDTEKAANGVPPDDRCPIEEVALVVPETDDPSIPVMTFRSWFLGITSCIILIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMAATLPTKEFNFFGWRFTLNPGPFNMKEHVIITIFANCGVSQGGGDAYSIGAITIMKAYYKQSLSFLLALFIVLTTQILGYGWAGILRRYLVDPVEMWWPSNLAQVSLFRALHEKENKSSKGFTRMQFFLIAMGVSFLYYALPGYLFTVLTFFSWICYAWPHNITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVAPWTSIVNVGVGFIMFIYIILPVCYWRFNTFDARKFPIFSNQLFTSSGHKYDTTKILTKEYDLNIDAYNKYGKLYLSPLFALSIGSGFARFTATLTHVALFHGRDILRQSKSAMGNVKVDVHGRLMKAYKQVPEWWFLILLFGSMALSLVMAFVWKTDVQLPWWGMLFAFGLAFVVTLPIGVIQATTNQQPGYDIIAQFMIGYLLPGKPIANLLFKIYGRISTVHALSFLQDLKLGHYMKIPPRCMYTAQLVGTLVAGVVNLSVAWWMLDSIKDICMDDKAHHDSPWTCPKYRVTFDASVIWGLIGPKRLFGPGGLYRNLVWLFLVGAVLPVPVWVFSKIYPNKKWIPLINIPVISYGFAGMPPATPTNIASWLLTGMIFNYFVFRFHKRWWQKYNYVLSAALDAGTAFMGVLIFFALQNAGHTLKWWGTELDHCPLATCPTAPGIVVDGCPVF*