AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1332430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332430 MtrunA17_Chr4g0076281 99.190 741 5 1 1 740 1 741 0.0 1503
Msa1332430 MtrunA17_Chr3g0119871 54.910 723 314 5 20 740 24 736 0.0 846
Msa1332430 MtrunA17_Chr2g0279871 53.986 715 323 3 28 739 28 739 0.0 829
Msa1332430 MtrunA17_Chr4g0049511 52.767 741 344 4 4 740 2 740 0.0 827
Msa1332430 MtrunA17_Chr3g0141131 52.394 731 338 5 14 740 2 726 0.0 820
Msa1332430 MtrunA17_Chr5g0446791 52.267 750 336 10 6 740 10 752 0.0 793
Msa1332430 MtrunA17_Chr8g0360211 51.801 722 341 4 21 740 23 739 0.0 777
Msa1332430 MtrunA17_Chr7g0257931 49.459 740 358 8 9 740 21 752 0.0 769
Msa1332430 MtrunA17_Chr5g0446821 49.802 759 334 8 24 740 20 773 0.0 756
Msa1332430 MtrunA17_Chr7g0257941 49.724 724 351 7 21 736 61 779 0.0 733
Msa1332430 MtrunA17_Chr7g0257971 47.043 727 335 8 21 739 51 735 0.0 682
Msa1332430 MtrunA17_Chr5g0446811 50.365 548 264 6 200 740 16 562 0.0 566
Msa1332430 MtrunA17_Chr4g0075771 57.278 316 38 7 215 527 1 222 2.08e-94 293
Msa1332430 MtrunA17_Chr5g0446801 56.983 179 71 2 23 199 20 194 1.15e-61 206
Msa1332430 MtrunA17_Chr5g0437391 84.615 39 6 0 638 676 302 340 1.56e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332430 AT4G16370.1 83.311 737 117 2 9 740 2 737 0.0 1286
Msa1332430 AT5G64410.1 53.909 729 329 3 14 739 4 728 0.0 844
Msa1332430 AT1G09930.1 53.920 727 330 3 15 740 12 734 0.0 839
Msa1332430 AT4G10770.1 54.659 719 315 5 24 740 56 765 0.0 830
Msa1332430 AT4G27730.1 52.893 726 332 6 20 740 16 736 0.0 793
Msa1332430 AT4G26590.1 53.224 729 327 8 21 740 30 753 0.0 784
Msa1332430 AT5G53520.1 50.476 735 354 6 10 740 5 733 0.0 766
Msa1332430 AT5G55930.1 51.265 751 348 9 3 740 10 755 0.0 759
Msa1332430 AT5G53510.1 51.724 725 340 6 21 740 22 741 0.0 743
Msa1332430 AT4G10770.2 53.874 555 252 2 186 740 1 551 0.0 639

Find 230 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTCCGTTCATGGTTTC+TGG 0.067027 8_4:+52397094 Msa1332430:CDS
AACTTGCTCTTTAAGATTTA+TGG 0.075578 8_4:+52400622 Msa1332430:CDS
AGAGGAATCCATTTCTTATT+AGG 0.117365 8_4:-52401107 None:intergenic
ATCAAATGTCACTCTGTATT+TGG 0.125563 8_4:-52400952 None:intergenic
ATAGAAGGGTCGTCGGTTTC+AGG 0.219683 8_4:-52397062 None:intergenic
AACATACCAGTTATATCTTA+TGG 0.249371 8_4:+52401134 Msa1332430:CDS
CCTCTCTTCGCATTGTCTAT+TGG 0.252317 8_4:+52399986 Msa1332430:CDS
CATTTGATGCATCTGTTATA+TGG 0.253153 8_4:+52400967 Msa1332430:CDS
TGGGGCATGCTCTTTGCTTT+TGG 0.255507 8_4:+52400350 Msa1332430:CDS
TATTTAGTCCCTTCACCTTT+TGG 0.258287 8_4:-52401531 None:intergenic
CAGTCATGACTTTCCGTTCA+TGG 0.259187 8_4:+52397087 Msa1332430:CDS
TTCCCCACCATTTGAGAGTA+TGG 0.265799 8_4:-52401349 None:intergenic
TTGCACAAGTCTCTCTCTTT+AGG 0.271929 8_4:+52398618 Msa1332430:CDS
GTGTCTGGAGTTGGATTCTT+TGG 0.283544 8_4:-52396972 None:intergenic
GAGGAATCCATTTCTTATTA+GGG 0.287451 8_4:-52401106 None:intergenic
GGACTTCCATTGTTAATGTT+GGG 0.298039 8_4:+52399762 Msa1332430:CDS
AAACCTTGTATGGTTATTCT+TGG 0.307696 8_4:+52401037 Msa1332430:CDS
ACTTGCTCTTTAAGATTTAT+GGG 0.308701 8_4:+52400623 Msa1332430:CDS
TAATTCTACCCGTATGTTAC+TGG 0.309917 8_4:+52399810 Msa1332430:CDS
TCAATTGGACATCTGTCGTC+TGG 0.310442 8_4:-52397020 None:intergenic
TATATTCAGTTAACTGATAA+TGG 0.310802 8_4:+52401647 Msa1332430:three_prime_UTR
AATATCACAGCACAACAAAT+TGG 0.314764 8_4:+52399650 Msa1332430:CDS
CAGTGTTGCCAGTTCCTGTT+TGG 0.322093 8_4:+52401066 Msa1332430:CDS
TAAATTGAGTTGCAGATATT+GGG 0.332470 8_4:+52398527 Msa1332430:intron
TGGGATTCTGAGGAGGTATC+TGG 0.336220 8_4:+52398562 Msa1332430:CDS
TTCTCTTCTCTTATCTTCAA+TGG 0.338143 8_4:+52396947 Msa1332430:exon
ACTGAATATATCCATAAATA+AGG 0.347320 8_4:-52401634 None:intergenic
GCAATGTTAGTTGGAGTTGC+AGG 0.354795 8_4:-52401173 None:intergenic
CAAATCGCTGTTCTTCCAAT+TGG 0.356781 8_4:+52397203 Msa1332430:CDS
TGGTATACTCCAAACCTAAC+TGG 0.358374 8_4:-52401511 None:intergenic
TCTTCCAATTGGAAAATTCA+TGG 0.361492 8_4:+52397214 Msa1332430:CDS
CAAATGGTGGGGAACTGAAT+TGG 0.363146 8_4:+52401358 Msa1332430:CDS
CATAATAATTGCTAAGCAAT+TGG 0.371780 8_4:-52401555 None:intergenic
ATTGATGCATACAACAAGTA+TGG 0.374972 8_4:+52399947 Msa1332430:CDS
TTTAGGGGTGTGGACCAGTT+AGG 0.376183 8_4:+52401497 Msa1332430:three_prime_UTR
ACTCATGTAGCATTATTTCA+TGG 0.378517 8_4:+52400040 Msa1332430:CDS
GGTTACCATGGACTTGGAAT+TGG 0.380324 8_4:+52399677 Msa1332430:CDS
GAGACTTGTGCAAGGTTTGA+TGG 0.380591 8_4:-52398608 None:intergenic
TTGGTGCATTCACACTTGAT+TGG 0.389457 8_4:+52399696 Msa1332430:CDS
ACGAGAGCTACTTCTTCAAT+TGG 0.390352 8_4:-52397035 None:intergenic
GGGTGTGGACCAGTTAGGTT+TGG 0.390748 8_4:+52401502 Msa1332430:three_prime_UTR
TTCTTGCAAGATCTCAAACT+TGG 0.392501 8_4:+52400673 Msa1332430:CDS
TCAAATGTCACTCTGTATTT+GGG 0.393782 8_4:-52400951 None:intergenic
ACTTTCCGTTCATGGTTTCT+GGG 0.394577 8_4:+52397095 Msa1332430:CDS
GATGGCCACCACATTTCAAC+AGG 0.394766 8_4:-52398590 None:intergenic
ATGATCGGGTATCTCCTTCC+TGG 0.395403 8_4:+52400586 Msa1332430:CDS
AAAATGAGGAACCACCATTC+TGG 0.396998 8_4:-52400257 None:intergenic
TTCGCATTGTCTATTGGATC+AGG 0.399417 8_4:+52399992 Msa1332430:CDS
TTAAAGAGCAAGTTTGCAAT+TGG 0.399423 8_4:-52400613 None:intergenic
ATTTGATGCATCTGTTATAT+GGG 0.400325 8_4:+52400968 Msa1332430:CDS
TCCATTGTTAATGTTGGGGT+TGG 0.406267 8_4:+52399767 Msa1332430:CDS
TTGCATAAGAATAGCAGAAA+TGG 0.413613 8_4:-52397183 None:intergenic
GCAAAACCATAAGATATAAC+TGG 0.414513 8_4:-52401140 None:intergenic
GCCACCAACGTTTGTGGAAG+CGG 0.418100 8_4:-52401238 None:intergenic
TGGCGTTTCACGTTGAATCC+TGG 0.422294 8_4:+52397275 Msa1332430:CDS
GGCTTTCTCTATTAGAATAC+AGG 0.423380 8_4:-52401437 None:intergenic
CAACCATCAACCACAATTCC+TGG 0.425417 8_4:-52401413 None:intergenic
CTTGTATGGTTATTCTTGGT+TGG 0.425735 8_4:+52401041 Msa1332430:CDS
AAATCTACCCTAATAAGAAA+TGG 0.430734 8_4:+52401099 Msa1332430:CDS
CTGGTGGGAACACTAGTTGC+TGG 0.432578 8_4:+52400834 Msa1332430:CDS
ATCGGACCGAAGCGGCTATT+CGG 0.432929 8_4:+52400996 Msa1332430:CDS
AAAGTCATGACTGGAATAGA+AGG 0.434612 8_4:-52397077 None:intergenic
CTAAACACCCAAACAGGAAC+TGG 0.434990 8_4:-52401074 None:intergenic
AGTGTTGCCAGTTCCTGTTT+GGG 0.439349 8_4:+52401067 Msa1332430:CDS
GCTCCAGGAATTGTGGTTGA+TGG 0.439708 8_4:+52401410 Msa1332430:CDS
ACATGCTCCTTCATATTAAA+CGG 0.440905 8_4:-52397299 None:intergenic
CTATCCGCGGCGCTTGATGC+AGG 0.442801 8_4:+52401278 Msa1332430:CDS
ATTTCTGCCACCAACGTTTG+TGG 0.444531 8_4:-52401244 None:intergenic
CCGTCTTAACATTCTTCTCA+TGG 0.444739 8_4:+52399606 Msa1332430:CDS
GATTGTACCGAAACCTTGTA+TGG 0.445058 8_4:+52401027 Msa1332430:CDS
TAGAAGGGTCGTCGGTTTCA+GGG 0.446344 8_4:-52397061 None:intergenic
AGCCAGCTTGCAATGTTAGT+TGG 0.448468 8_4:-52401182 None:intergenic
GTACCTGGTTGGTAGTTGCT+TGG 0.449016 8_4:-52400409 None:intergenic
TGGACTTCCATTGTTAATGT+TGG 0.454339 8_4:+52399761 Msa1332430:CDS
TGGTGCATTCACACTTGATT+GGG 0.454657 8_4:+52399697 Msa1332430:CDS
AATGTTAAGATCATATTCCT+TGG 0.457676 8_4:-52399927 None:intergenic
GTGGATGTTGGATAGCATAA+AGG 0.461735 8_4:+52400881 Msa1332430:CDS
CAATTGGACATCTGTCGTCT+GGG 0.463466 8_4:-52397019 None:intergenic
CCCAACTGCTCCAGGAATTG+TGG 0.465847 8_4:+52401403 Msa1332430:CDS
TTCTTGTTCTGTCAAATGAC+AGG 0.467690 8_4:-52396837 None:intergenic
GCTACTTGCCCAACTGCTCC+AGG 0.469429 8_4:+52401395 Msa1332430:CDS
AGAATAACCATACAAGGTTT+CGG 0.470528 8_4:-52401034 None:intergenic
ATATTGGGCTATGGATGGGC+TGG 0.471536 8_4:+52398542 Msa1332430:CDS
TTCAGTGGCTTGGTGGATGT+TGG 0.472380 8_4:+52400869 Msa1332430:CDS
TTCTTCGCTCTGCAAAATGC+AGG 0.473572 8_4:+52401326 Msa1332430:CDS
ATGCTTCTTGCTTGTTATCA+CGG 0.476348 8_4:+52401581 Msa1332430:three_prime_UTR
AAGCTCACCATGACAGTCCT+TGG 0.477430 8_4:+52400922 Msa1332430:CDS
TGCAGATATTGGGCTATGGA+TGG 0.480173 8_4:+52398537 Msa1332430:intron
TGGTGAACCTTTCAGTGGCT+TGG 0.483420 8_4:+52400859 Msa1332430:CDS
GGATCAGGTTACCATGGACT+TGG 0.486591 8_4:+52399671 Msa1332430:CDS
ACCACAATTCCTGGAGCAGT+TGG 0.490448 8_4:-52401404 None:intergenic
CCTGGTCCGAATAGCCGCTT+CGG 0.490623 8_4:-52401002 None:intergenic
GTGCTGTATACATGCATCGC+GGG 0.491917 8_4:-52400714 None:intergenic
AAAGAGAATAAATCATCAAA+AGG 0.492126 8_4:+52399506 Msa1332430:CDS
TTGCTTGGATGACACCGATT+GGG 0.492702 8_4:-52400394 None:intergenic
TGAACCTTTCAGTGGCTTGG+TGG 0.493204 8_4:+52400862 Msa1332430:CDS
CATGGCGCTATCTTTAGTAA+TGG 0.493754 8_4:+52400292 Msa1332430:CDS
GCTAACTGTGGTGTTTCTCA+AGG 0.493992 8_4:+52397338 Msa1332430:CDS
ATGTAGCATTATTTCATGGC+AGG 0.497819 8_4:+52400044 Msa1332430:CDS
ACAGAATATATAATATCAAA+AGG 0.499157 8_4:+52401759 Msa1332430:three_prime_UTR
TCTTGCAAGATCTCAAACTT+GGG 0.499677 8_4:+52400674 Msa1332430:CDS
CAGTTGGGCAAGTAGCCAAC+GGG 0.500085 8_4:-52401388 None:intergenic
AACAACTGATTAGAGAATAT+AGG 0.501653 8_4:-52399863 None:intergenic
GCATTCACACTTGATTGGGC+TGG 0.502823 8_4:+52399701 Msa1332430:CDS
GCTGGAATTTCAGCTTATCA+TGG 0.502833 8_4:+52399719 Msa1332430:CDS
TTTGTTGTAACTCTCCCAAT+CGG 0.506469 8_4:+52400380 Msa1332430:CDS
AAGTTTGCAATTGGTTTCCC+AGG 0.508014 8_4:-52400604 None:intergenic
GGCAAGTAGCCAACGGGCAA+TGG 0.509667 8_4:-52401382 None:intergenic
TCCTGGTCCGTTTAATATGA+AGG 0.510592 8_4:+52397292 Msa1332430:CDS
ATGCAGGCCATACTCTCAAA+TGG 0.511772 8_4:+52401342 Msa1332430:CDS
GACTTCCATTGTTAATGTTG+GGG 0.513380 8_4:+52399763 Msa1332430:CDS
AGACAGAGTAAATCAGCAAT+GGG 0.519389 8_4:+52400182 Msa1332430:CDS
ATTATTGCACAGTTCATGAT+CGG 0.519983 8_4:+52400571 Msa1332430:CDS
CGCGGCGCTTGATGCAGGCA+CGG 0.520662 8_4:+52401283 Msa1332430:CDS
AATCAGTTGTTCACGTCAAG+TGG 0.522906 8_4:+52399875 Msa1332430:CDS
TCTGTTATATGGGGTTTGAT+CGG 0.525236 8_4:+52400978 Msa1332430:CDS
TCTCATGGATTTGCTACGCA+TGG 0.525558 8_4:+52399621 Msa1332430:CDS
TTATTGCACAGTTCATGATC+GGG 0.526020 8_4:+52400572 Msa1332430:CDS
ATGGTTACCTTGCAGCAACC+TGG 0.527539 8_4:+52400541 Msa1332430:intron
CCACAATTCCTGGAGCAGTT+GGG 0.528952 8_4:-52401403 None:intergenic
AGAATAGCAGAAATGGTTAG+TGG 0.530312 8_4:-52397176 None:intergenic
AAGACGGTGAAAAGATAGCC+GGG 0.530909 8_4:-52399590 None:intergenic
TGTTCTGTCAAATGACAGGT+TGG 0.532135 8_4:-52396833 None:intergenic
TCCGCTTCCACAAACGTTGG+TGG 0.532601 8_4:+52401237 Msa1332430:CDS
TTGCAATTGGTTTCCCAGGA+AGG 0.533006 8_4:-52400600 None:intergenic
TGTTGTGCTGTGATATTATG+TGG 0.533560 8_4:-52399644 None:intergenic
CATAATAGTAATAGCACCAA+TGG 0.534949 8_4:-52397378 None:intergenic
TGTCAAATGACAGGTTGGAA+TGG 0.538022 8_4:-52396828 None:intergenic
GGTGGTGATGCTTACTCCAT+TGG 0.540854 8_4:+52397362 Msa1332430:CDS
AGAGAAAGCCTAGTTGACTT+AGG 0.541749 8_4:+52401450 Msa1332430:three_prime_UTR
GTTAAACCTCCAGTAACATA+CGG 0.543093 8_4:-52399819 None:intergenic
AATCATCAAAAGGCTTTACA+AGG 0.543100 8_4:+52399516 Msa1332430:CDS
TTCTTGTATTATGCACTCCC+CGG 0.543396 8_4:+52399572 Msa1332430:CDS
AAAGTAGTTGAAGATCATTC+CGG 0.548296 8_4:-52401210 None:intergenic
TATTGGGCTATGGATGGGCT+GGG 0.548491 8_4:+52398543 Msa1332430:CDS
AATATATCCATAAATAAGGC+AGG 0.549588 8_4:-52401630 None:intergenic
ACAGCACAACAAATTGGATC+AGG 0.552728 8_4:+52399656 Msa1332430:CDS
TGGAAGTCCATGGTGCAACA+AGG 0.553249 8_4:-52399748 None:intergenic
CAACCAAGAATAACCATACA+AGG 0.554993 8_4:-52401040 None:intergenic
AAATAGAGCCTAAGTCAACT+AGG 0.555311 8_4:-52401458 None:intergenic
CTTATAAGCAAGTACCAGAA+TGG 0.556871 8_4:+52400243 Msa1332430:CDS
TGTGCAATAATGTCATATCC+AGG 0.560478 8_4:-52400559 None:intergenic
TAGGTTTGGAGTATACCAAA+AGG 0.561650 8_4:+52401516 Msa1332430:three_prime_UTR
TGCTTCCAAATAATAAAATG+AGG 0.567240 8_4:-52400271 None:intergenic
GGATGTGCAACTTCCATGGT+GGG 0.570574 8_4:+52400331 Msa1332430:CDS
GAGACAGAGTAAATCAGCAA+TGG 0.571794 8_4:+52400181 Msa1332430:CDS
ATGGATGGGCTGGGATTCTG+AGG 0.572003 8_4:+52398552 Msa1332430:CDS
GCAGTTGGGCAAGTAGCCAA+CGG 0.572167 8_4:-52401389 None:intergenic
AGGCCATACTCTCAAATGGT+GGG 0.572786 8_4:+52401346 Msa1332430:CDS
TGGAGTGGTGAACCTTTCAG+TGG 0.573103 8_4:+52400854 Msa1332430:CDS
TCCTTCATATTAAACGGACC+AGG 0.573981 8_4:-52397293 None:intergenic
CATGAACGGAAAGTCATGAC+TGG 0.574907 8_4:-52397086 None:intergenic
CTTGCAAGAAAGAGAGTGCA+TGG 0.576649 8_4:-52400660 None:intergenic
GGAAGTCCATGGTGCAACAA+GGG 0.576753 8_4:-52399747 None:intergenic
TGAATTTCCAAATAGCTGGT+GGG 0.577855 8_4:+52400819 Msa1332430:intron
ATTGCAAGCTGGCTATTGAC+CGG 0.579049 8_4:+52401191 Msa1332430:CDS
TAAGACGGTGAAAAGATAGC+CGG 0.580107 8_4:-52399591 None:intergenic
GAATGGAGTTAGTACCTGGT+TGG 0.581377 8_4:-52400420 None:intergenic
TGATCGGGTATCTCCTTCCT+GGG 0.581852 8_4:+52400587 Msa1332430:CDS
TGCTGTATACATGCATCGCG+GGG 0.582828 8_4:-52400713 None:intergenic
CTGTATTTGGGACAAGTCCA+AGG 0.583762 8_4:-52400939 None:intergenic
TCCAACCCCAACATTAACAA+TGG 0.583982 8_4:-52399768 None:intergenic
AACGTAAAAGTTGATGTGCA+TGG 0.586475 8_4:+52400206 Msa1332430:CDS
CCAATAGACAATGCGAAGAG+AGG 0.587306 8_4:-52399986 None:intergenic
TTTGATGCATCTGTTATATG+GGG 0.588349 8_4:+52400969 Msa1332430:CDS
TGGAGTATACCAAAAGGTGA+AGG 0.589389 8_4:+52401522 Msa1332430:three_prime_UTR
CAAGAAAGAGAGTGCATGGA+CGG 0.590038 8_4:-52400656 None:intergenic
GTTGCTTGGATGACACCGAT+TGG 0.590305 8_4:-52400395 None:intergenic
TGTGGTGTTTCTCAAGGTGG+TGG 0.591102 8_4:+52397344 Msa1332430:CDS
ATGCACCAATTCCAAGTCCA+TGG 0.591178 8_4:-52399682 None:intergenic
AAACTCTTTCGTGGGAAGAG+TGG 0.591371 8_4:-52397240 None:intergenic
CTCCAACTAACATTGCAAGC+TGG 0.593648 8_4:+52401180 Msa1332430:CDS
GAAATAATGCTACATGAGTG+AGG 0.594196 8_4:-52400036 None:intergenic
GAGTTGCAGATATTGGGCTA+TGG 0.594376 8_4:+52398533 Msa1332430:intron
TTCTACCCGTATGTTACTGG+AGG 0.594516 8_4:+52399813 Msa1332430:CDS
CGGATGTGCAACTTCCATGG+TGG 0.594864 8_4:+52400330 Msa1332430:CDS
GATTCTGAGGAGGTATCTGG+TGG 0.595497 8_4:+52398565 Msa1332430:CDS
TAGCATAAAGGACATTTGCA+TGG 0.596796 8_4:+52400893 Msa1332430:CDS
CTCTTTCGTGGGAAGAGTGG+CGG 0.596961 8_4:-52397237 None:intergenic
AATTGGACATCTGTCGTCTG+GGG 0.597748 8_4:-52397018 None:intergenic
ATTCATCGTCTTAACCACTC+AGG 0.598386 8_4:+52397442 Msa1332430:CDS
GACTGGAATAGAAGGGTCGT+CGG 0.598556 8_4:-52397069 None:intergenic
CAAATTGGATCAGGTTACCA+TGG 0.599410 8_4:+52399665 Msa1332430:CDS
GGCCATACTCTCAAATGGTG+GGG 0.599445 8_4:+52401347 Msa1332430:CDS
AACTGTGGTGTTTCTCAAGG+TGG 0.609520 8_4:+52397341 Msa1332430:CDS
CCATGAGAAGAATGTTAAGA+CGG 0.610563 8_4:-52399606 None:intergenic
GAAGTCCATGGTGCAACAAG+GGG 0.611896 8_4:-52399746 None:intergenic
CATCCAAGCAACTACCAACC+AGG 0.613390 8_4:+52400406 Msa1332430:CDS
TGAATTGGACCATTGCCCGT+TGG 0.615015 8_4:+52401373 Msa1332430:CDS
ACATCCACCAAGCCACTGAA+AGG 0.615061 8_4:-52400866 None:intergenic
GGAGTATACCAAAAGGTGAA+GGG 0.617937 8_4:+52401523 Msa1332430:three_prime_UTR
AAACGGATGTGCAACTTCCA+TGG 0.618006 8_4:+52400327 Msa1332430:CDS
TGGTGGACCCTGTTGAAATG+TGG 0.620171 8_4:+52398582 Msa1332430:CDS
ACATTAACAATGGAAGTCCA+TGG 0.620631 8_4:-52399758 None:intergenic
GCGATGCATGTATACAGCAC+AGG 0.620769 8_4:+52400717 Msa1332430:CDS
GCAGATATTGGGCTATGGAT+GGG 0.622626 8_4:+52398538 Msa1332430:intron
ATTGGACATCTGTCGTCTGG+GGG 0.624277 8_4:-52397017 None:intergenic
GCAAAGAGCATGCCCCACCA+TGG 0.624881 8_4:-52400344 None:intergenic
AAATAATGCTACATGAGTGA+GGG 0.627674 8_4:-52400035 None:intergenic
CAGGCCATACTCTCAAATGG+TGG 0.629647 8_4:+52401345 Msa1332430:CDS
ATACAAGAAGCTAACGCCCA+TGG 0.630377 8_4:-52399558 None:intergenic
TGGACCCTGTTGAAATGTGG+TGG 0.631265 8_4:+52398585 Msa1332430:CDS
AAGTCATGACTGGAATAGAA+GGG 0.641825 8_4:-52397076 None:intergenic
ATAACTGGTATGTTTATCAG+AGG 0.641908 8_4:-52401125 None:intergenic
GGGAACACTAGTTGCTGGAG+TGG 0.642198 8_4:+52400839 Msa1332430:CDS
GATGGGCTGGGATTCTGAGG+AGG 0.642204 8_4:+52398555 Msa1332430:CDS
TGTTCCGCTTCCACAAACGT+TGG 0.644974 8_4:+52401234 Msa1332430:CDS
AGCTAACGCCCATGGCAATG+AGG 0.647346 8_4:-52399550 None:intergenic
GACAAGTCCAAGGACTGTCA+TGG 0.647797 8_4:-52400929 None:intergenic
TTCACAATGCGTCCTCTCAG+CGG 0.649085 8_4:-52396789 None:intergenic
ATGTTAGTTGGAGTTGCAGG+TGG 0.652154 8_4:-52401170 None:intergenic
TTAAGACGATGAATAGAGCA+AGG 0.653502 8_4:-52397433 None:intergenic
AGGTTTCGGTACAATCCACC+TGG 0.653741 8_4:-52401020 None:intergenic
CTTCTTGCTTGTTATCACGG+AGG 0.654060 8_4:+52401584 Msa1332430:three_prime_UTR
ATAAGCAAGTACCAGAATGG+TGG 0.668486 8_4:+52400246 Msa1332430:CDS
CACGACAAAGATCTTAACCA+AGG 0.669431 8_4:+52399910 Msa1332430:CDS
TTAAACCTCCAGTAACATAC+GGG 0.670866 8_4:-52399818 None:intergenic
GATGTGCAACTTCCATGGTG+GGG 0.672934 8_4:+52400332 Msa1332430:CDS
ATATAATTATGTTCTATCCG+CGG 0.673884 8_4:+52401265 Msa1332430:CDS
TAAAGAGAGAGACTTGTGCA+AGG 0.675007 8_4:-52398616 None:intergenic
TGTGCTGTATACATGCATCG+CGG 0.677093 8_4:-52400715 None:intergenic
ACAATGCGAAGAGAGGACTA+AGG 0.678835 8_4:-52399979 None:intergenic
TAATTCCCAGAAACCATGAA+CGG 0.680108 8_4:-52397100 None:intergenic
GGGGTTTGATCGGACCGAAG+CGG 0.684425 8_4:+52400988 Msa1332430:CDS
TATAAACAAACACCGCTGAG+AGG 0.685076 8_4:+52396777 None:intergenic
AAGCGGCTATTCGGACCAGG+TGG 0.693998 8_4:+52401005 Msa1332430:CDS
AGACGGTGAAAAGATAGCCG+GGG 0.701353 8_4:-52399589 None:intergenic
ATGGCCACCACATTTCAACA+GGG 0.710481 8_4:-52398589 None:intergenic
AAGTCCATGGTGCAACAAGG+GGG 0.711094 8_4:-52399745 None:intergenic
GCTGTATACATGCATCGCGG+GGG 0.718081 8_4:-52400712 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTATCTTTTAATTTAG+AGG + chr8_4:52397513-52397532 Msa1332430:intron 10.0%
!!! ATATCAATATTATTTGATTT+TGG - chr8_4:52397767-52397786 None:intergenic 10.0%
!!! CTTTTTTCTTTAATTCTATT+TGG + chr8_4:52397467-52397486 Msa1332430:intron 15.0%
!! TATAATAAACAAGTAAATCA+AGG - chr8_4:52397602-52397621 None:intergenic 15.0%
!! CTTAATTCATTATTAAATGA+TGG + chr8_4:52398206-52398225 Msa1332430:intron 15.0%
!!! TATTCATTCATTTTGTAAAT+TGG - chr8_4:52398906-52398925 None:intergenic 15.0%
!! AAGAAATAAGTTTATTCTAA+AGG - chr8_4:52400086-52400105 None:intergenic 15.0%
!! AATAAAATAATTCTCACGAT+TGG - chr8_4:52397644-52397663 None:intergenic 20.0%
!! GATATAACTAGTATATGTTA+TGG + chr8_4:52397782-52397801 Msa1332430:intron 20.0%
!! AGTGATATTGTATATTATAC+TGG + chr8_4:52397898-52397917 Msa1332430:intron 20.0%
!!! GTTCTATTGTTTTTTTGTTT+TGG + chr8_4:52398365-52398384 Msa1332430:intron 20.0%
!!! AAGATGAGTTGAATTTAATT+TGG + chr8_4:52398408-52398427 Msa1332430:intron 20.0%
!! CAATTGAATAAAACGTAATA+TGG - chr8_4:52398666-52398685 None:intergenic 20.0%
!!! CATATTACGTTTTATTCAAT+TGG + chr8_4:52398664-52398683 Msa1332430:intron 20.0%
!! ATAAATATTAGTAAGATGAG+TGG - chr8_4:52398869-52398888 None:intergenic 20.0%
!!! TCTCTTATTTATAAACTCAA+GGG + chr8_4:52398991-52399010 Msa1332430:intron 20.0%
!! AAAATCAAAAAGAACTTGTA+TGG + chr8_4:52399033-52399052 Msa1332430:intron 20.0%
!! CATATTTACAACTTTCAATT+TGG - chr8_4:52399181-52399200 None:intergenic 20.0%
!! AATATTCTCTAATGTTTCTT+TGG + chr8_4:52399313-52399332 Msa1332430:intron 20.0%
!!! ATGATTTATTCTCTTTTTCA+TGG - chr8_4:52399502-52399521 None:intergenic 20.0%
!! AAAGAGAATAAATCATCAAA+AGG + chr8_4:52399506-52399525 Msa1332430:CDS 20.0%
!! TCTTATACATGTATTAACTA+AGG + chr8_4:52400102-52400121 Msa1332430:intron 20.0%
!!! AAAAGAAAAGTGTAGATTAT+AGG - chr8_4:52400459-52400478 None:intergenic 20.0%
!! TAACAAGCAAGAAAAAAAAA+AGG - chr8_4:52400785-52400804 None:intergenic 20.0%
!!! TTTTACTTGTTTTTGCTTTT+AGG + chr8_4:52401480-52401499 Msa1332430:three_prime_UTR 20.0%
!!! TTTACTTGTTTTTGCTTTTA+GGG + chr8_4:52401481-52401500 Msa1332430:three_prime_UTR 20.0%
!! ACTGAATATATCCATAAATA+AGG - chr8_4:52401637-52401656 None:intergenic 20.0%
!! TATATTCAGTTAACTGATAA+TGG + chr8_4:52401647-52401666 Msa1332430:three_prime_UTR 20.0%
!!! TTTTAGGAATTGAAAATTCA+TGG + chr8_4:52401695-52401714 Msa1332430:three_prime_UTR 20.0%
!!! AATTGAAAATTCATGGTTTT+TGG + chr8_4:52401702-52401721 Msa1332430:three_prime_UTR 20.0%
! AAAAAGTTAAACTCTTTCGT+GGG - chr8_4:52397251-52397270 None:intergenic 25.0%
! AAAAAAGTTAAACTCTTTCG+TGG - chr8_4:52397252-52397271 None:intergenic 25.0%
!!! ACGAAAGAGTTTAACTTTTT+TGG + chr8_4:52397251-52397270 Msa1332430:CDS 25.0%
!!! CGAAAGAGTTTAACTTTTTT+GGG + chr8_4:52397252-52397271 Msa1332430:CDS 25.0%
!!! TTAGTGCAAAGTAGTTTTTT+TGG + chr8_4:52397543-52397562 Msa1332430:intron 25.0%
!!! GTTTTTTTGGTCAAAGATTT+TGG + chr8_4:52397556-52397575 Msa1332430:intron 25.0%
!!! TTGATAGTGAAGTTATTGTT+TGG + chr8_4:52397831-52397850 Msa1332430:intron 25.0%
! AGTAATCTCAAAGTGAATAT+AGG + chr8_4:52397976-52397995 Msa1332430:intron 25.0%
!!! GTAAGTAGTTGTTAATTTGT+TGG + chr8_4:52398127-52398146 Msa1332430:intron 25.0%
!! ATTTGTTGGAAATGTTATTG+TGG + chr8_4:52398141-52398160 Msa1332430:intron 25.0%
! TTTGTTGGAAATGTTATTGT+GGG + chr8_4:52398142-52398161 Msa1332430:intron 25.0%
!! GTTCAGTGTTGAAAAAAATT+TGG + chr8_4:52398299-52398318 Msa1332430:intron 25.0%
!! TAAATTGAGTTGCAGATATT+GGG + chr8_4:52398527-52398546 Msa1332430:intron 25.0%
! AAACGTAATATGGAAGAAAA+GGG - chr8_4:52398656-52398675 None:intergenic 25.0%
! AAAACGTAATATGGAAGAAA+AGG - chr8_4:52398657-52398676 None:intergenic 25.0%
! TATTTACTTCAATAACCCTT+TGG + chr8_4:52398695-52398714 Msa1332430:intron 25.0%
!!! TACTTTTAGAAATCACCAAA+GGG - chr8_4:52398713-52398732 None:intergenic 25.0%
!!! TTACTTTTAGAAATCACCAA+AGG - chr8_4:52398714-52398733 None:intergenic 25.0%
! TTCAATATGAAATGAAGTGT+CGG + chr8_4:52398841-52398860 Msa1332430:intron 25.0%
! GTAAATTGGCTAATGAATAT+TGG - chr8_4:52398892-52398911 None:intergenic 25.0%
!! CTCTCTTATTTATAAACTCA+AGG + chr8_4:52398990-52399009 Msa1332430:intron 25.0%
! ATGCTATAGAAAAAAACACT+TGG + chr8_4:52399124-52399143 Msa1332430:intron 25.0%
! CAACTTTCAATTTGGTATAA+TGG - chr8_4:52399173-52399192 None:intergenic 25.0%
! CTGTATAATTGACAACAAAT+AGG + chr8_4:52399336-52399355 Msa1332430:intron 25.0%
!! ACAGTGAAAACTAATTTTCT+TGG + chr8_4:52399393-52399412 Msa1332430:intron 25.0%
!! AAAACTAATTTTCTTGGTCA+AGG + chr8_4:52399399-52399418 Msa1332430:intron 25.0%
! AACAACTGATTAGAGAATAT+AGG - chr8_4:52399866-52399885 None:intergenic 25.0%
! AATGTTAAGATCATATTCCT+TGG - chr8_4:52399930-52399949 None:intergenic 25.0%
!! TGGTTCCTCATTTTATTATT+TGG + chr8_4:52400266-52400285 Msa1332430:CDS 25.0%
! TGCTTCCAAATAATAAAATG+AGG - chr8_4:52400274-52400293 None:intergenic 25.0%
!! CATTTTATTATTTGGAAGCA+TGG + chr8_4:52400274-52400293 Msa1332430:CDS 25.0%
!!! AACTTGCTCTTTAAGATTTA+TGG + chr8_4:52400622-52400641 Msa1332430:CDS 25.0%
!!! ACTTGCTCTTTAAGATTTAT+GGG + chr8_4:52400623-52400642 Msa1332430:CDS 25.0%
! ATAACAAAAGAGTCTAAACT+AGG - chr8_4:52400762-52400781 None:intergenic 25.0%
!! ATTTTGAATTTCCAAATAGC+TGG + chr8_4:52400815-52400834 Msa1332430:intron 25.0%
! ATTTGATGCATCTGTTATAT+GGG + chr8_4:52400968-52400987 Msa1332430:CDS 25.0%
! AAATCTACCCTAATAAGAAA+TGG + chr8_4:52401099-52401118 Msa1332430:CDS 25.0%
! AACATACCAGTTATATCTTA+TGG + chr8_4:52401134-52401153 Msa1332430:CDS 25.0%
! ATATAATTATGTTCTATCCG+CGG + chr8_4:52401265-52401284 Msa1332430:CDS 25.0%
!!! TTACTTGTTTTTGCTTTTAG+GGG + chr8_4:52401482-52401501 Msa1332430:three_prime_UTR 25.0%
! CATAATAATTGCTAAGCAAT+TGG - chr8_4:52401558-52401577 None:intergenic 25.0%
!!! TTTTTTACCTGCCTTATTTA+TGG + chr8_4:52401623-52401642 Msa1332430:three_prime_UTR 25.0%
! AATATATCCATAAATAAGGC+AGG - chr8_4:52401633-52401652 None:intergenic 25.0%
TTCTCTTCTCTTATCTTCAA+TGG + chr8_4:52396947-52396966 Msa1332430:exon 30.0%
TTGCATAAGAATAGCAGAAA+TGG - chr8_4:52397186-52397205 None:intergenic 30.0%
TCTTCCAATTGGAAAATTCA+TGG + chr8_4:52397214-52397233 Msa1332430:CDS 30.0%
!!! AAGAGTTTAACTTTTTTGGG+TGG + chr8_4:52397255-52397274 Msa1332430:CDS 30.0%
ACATGCTCCTTCATATTAAA+CGG - chr8_4:52397302-52397321 None:intergenic 30.0%
!!! ATCACTATTTTTGCTAACTG+TGG + chr8_4:52397326-52397345 Msa1332430:CDS 30.0%
CATAATAGTAATAGCACCAA+TGG - chr8_4:52397381-52397400 None:intergenic 30.0%
TAAAGAAAAAAGAACCTGAG+TGG - chr8_4:52397459-52397478 None:intergenic 30.0%
GATGCAGAATATATAATTGC+AGG + chr8_4:52397715-52397734 Msa1332430:intron 30.0%
CTCAAAGTGAATATAGGATA+AGG + chr8_4:52397982-52398001 Msa1332430:intron 30.0%
! GTAAATTGAGTTGCAGATAT+TGG + chr8_4:52398526-52398545 Msa1332430:intron 30.0%
AACGTAATATGGAAGAAAAG+GGG - chr8_4:52398655-52398674 None:intergenic 30.0%
TAGTCAATCACAAACTTGAT+TGG - chr8_4:52399085-52399104 None:intergenic 30.0%
TGAAAGTTGTAAATATGTCG+TGG + chr8_4:52399184-52399203 Msa1332430:intron 30.0%
TAATTGACAACAAATAGGCA+AGG + chr8_4:52399341-52399360 Msa1332430:intron 30.0%
AATCATCAAAAGGCTTTACA+AGG + chr8_4:52399516-52399535 Msa1332430:CDS 30.0%
AATATCACAGCACAACAAAT+TGG + chr8_4:52399650-52399669 Msa1332430:CDS 30.0%
ATTGATGCATACAACAAGTA+TGG + chr8_4:52399947-52399966 Msa1332430:CDS 30.0%
! ATCAGGTTTTGCAAGATTTA+CGG + chr8_4:52400009-52400028 Msa1332430:CDS 30.0%
AAATAATGCTACATGAGTGA+GGG - chr8_4:52400038-52400057 None:intergenic 30.0%
ACTCATGTAGCATTATTTCA+TGG + chr8_4:52400040-52400059 Msa1332430:CDS 30.0%
! CTTTAGTAATGGCTTTTGTT+TGG + chr8_4:52400303-52400322 Msa1332430:CDS 30.0%
!! AATGGCTTTTGTTTGGAAAA+CGG + chr8_4:52400310-52400329 Msa1332430:CDS 30.0%
! AGAAAAGTGTAGATTATAGG+TGG - chr8_4:52400456-52400475 None:intergenic 30.0%
ATTATTGCACAGTTCATGAT+CGG + chr8_4:52400571-52400590 Msa1332430:CDS 30.0%
TTAAAGAGCAAGTTTGCAAT+TGG - chr8_4:52400616-52400635 None:intergenic 30.0%
TCAAATGTCACTCTGTATTT+GGG - chr8_4:52400954-52400973 None:intergenic 30.0%
ATCAAATGTCACTCTGTATT+TGG - chr8_4:52400955-52400974 None:intergenic 30.0%
CATTTGATGCATCTGTTATA+TGG + chr8_4:52400967-52400986 Msa1332430:CDS 30.0%
TTTGATGCATCTGTTATATG+GGG + chr8_4:52400969-52400988 Msa1332430:CDS 30.0%
AGAATAACCATACAAGGTTT+CGG - chr8_4:52401037-52401056 None:intergenic 30.0%
AAACCTTGTATGGTTATTCT+TGG + chr8_4:52401037-52401056 Msa1332430:CDS 30.0%
GAGGAATCCATTTCTTATTA+GGG - chr8_4:52401109-52401128 None:intergenic 30.0%
AGAGGAATCCATTTCTTATT+AGG - chr8_4:52401110-52401129 None:intergenic 30.0%
ATAACTGGTATGTTTATCAG+AGG - chr8_4:52401128-52401147 None:intergenic 30.0%
GCAAAACCATAAGATATAAC+TGG - chr8_4:52401143-52401162 None:intergenic 30.0%
!! GTTATATCTTATGGTTTTGC+TGG + chr8_4:52401143-52401162 Msa1332430:CDS 30.0%
AAAGTAGTTGAAGATCATTC+CGG - chr8_4:52401213-52401232 None:intergenic 30.0%
GCAGGTAAAAAAAGACAAAA+AGG - chr8_4:52401615-52401634 None:intergenic 30.0%
!! TGACGTCTGAAATACATTTT+AGG + chr8_4:52401679-52401698 Msa1332430:three_prime_UTR 30.0%
!!! AATTCATGGTTTTTGGTAGT+TGG + chr8_4:52401709-52401728 Msa1332430:three_prime_UTR 30.0%
TTCTTGTTCTGTCAAATGAC+AGG - chr8_4:52396840-52396859 None:intergenic 35.0%
AAGTCATGACTGGAATAGAA+GGG - chr8_4:52397079-52397098 None:intergenic 35.0%
AAAGTCATGACTGGAATAGA+AGG - chr8_4:52397080-52397099 None:intergenic 35.0%
TAATTCCCAGAAACCATGAA+CGG - chr8_4:52397103-52397122 None:intergenic 35.0%
AGAATAGCAGAAATGGTTAG+TGG - chr8_4:52397179-52397198 None:intergenic 35.0%
TTAAGACGATGAATAGAGCA+AGG - chr8_4:52397436-52397455 None:intergenic 35.0%
! TTGGTCAAAGATTTTGGACA+AGG + chr8_4:52397562-52397581 Msa1332430:intron 35.0%
TGCAGGCAATTGTTTATGTT+TGG + chr8_4:52397732-52397751 Msa1332430:intron 35.0%
GCAGGCAATTGTTTATGTTT+GGG + chr8_4:52397733-52397752 Msa1332430:intron 35.0%
TTGTTATCTGCAAGTCTATC+TGG + chr8_4:52398337-52398356 Msa1332430:intron 35.0%
ACGTATTAGTGTCTTTGTGT+TGG - chr8_4:52398740-52398759 None:intergenic 35.0%
AACACAAAGACACTAATACG+TGG + chr8_4:52398739-52398758 Msa1332430:intron 35.0%
AACCACACATTTCATTGTCT+TGG + chr8_4:52398802-52398821 Msa1332430:intron 35.0%
AACACTTGGTTTAACCTTAG+TGG + chr8_4:52399138-52399157 Msa1332430:intron 35.0%
ACACTTGGTTTAACCTTAGT+GGG + chr8_4:52399139-52399158 Msa1332430:intron 35.0%
! ATATCACAAGCTGTGTTGTT+CGG + chr8_4:52399237-52399256 Msa1332430:intron 35.0%
! CACTGTTGCATAAGTTCTTT+TGG - chr8_4:52399379-52399398 None:intergenic 35.0%
CCATGAGAAGAATGTTAAGA+CGG - chr8_4:52399609-52399628 None:intergenic 35.0%
TGTTGTGCTGTGATATTATG+TGG - chr8_4:52399647-52399666 None:intergenic 35.0%
ACATTAACAATGGAAGTCCA+TGG - chr8_4:52399761-52399780 None:intergenic 35.0%
TGGACTTCCATTGTTAATGT+TGG + chr8_4:52399761-52399780 Msa1332430:CDS 35.0%
GGACTTCCATTGTTAATGTT+GGG + chr8_4:52399762-52399781 Msa1332430:CDS 35.0%
GACTTCCATTGTTAATGTTG+GGG + chr8_4:52399763-52399782 Msa1332430:CDS 35.0%
TAATTCTACCCGTATGTTAC+TGG + chr8_4:52399810-52399829 Msa1332430:CDS 35.0%
TTAAACCTCCAGTAACATAC+GGG - chr8_4:52399821-52399840 None:intergenic 35.0%
GTTAAACCTCCAGTAACATA+CGG - chr8_4:52399822-52399841 None:intergenic 35.0%
! GGTTTAACACTTTTGATGCT+AGG + chr8_4:52399834-52399853 Msa1332430:CDS 35.0%
GAAATAATGCTACATGAGTG+AGG - chr8_4:52400039-52400058 None:intergenic 35.0%
ATGTAGCATTATTTCATGGC+AGG + chr8_4:52400044-52400063 Msa1332430:CDS 35.0%
CTCAATATGTCTCTGCATAA+AGG - chr8_4:52400164-52400183 None:intergenic 35.0%
AGACAGAGTAAATCAGCAAT+GGG + chr8_4:52400182-52400201 Msa1332430:CDS 35.0%
!! AACGTAAAAGTTGATGTGCA+TGG + chr8_4:52400206-52400225 Msa1332430:CDS 35.0%
CTTATAAGCAAGTACCAGAA+TGG + chr8_4:52400243-52400262 Msa1332430:CDS 35.0%
! TTTGTTGTAACTCTCCCAAT+CGG + chr8_4:52400380-52400399 Msa1332430:CDS 35.0%
TATTGAATGGAGTTAGTACC+TGG - chr8_4:52400427-52400446 None:intergenic 35.0%
TAGGTGGCAGAAATATTGAA+TGG - chr8_4:52400440-52400459 None:intergenic 35.0%
AACATGAGTGTTTCCTATGA+TGG + chr8_4:52400522-52400541 Msa1332430:intron 35.0%
TGTGCAATAATGTCATATCC+AGG - chr8_4:52400562-52400581 None:intergenic 35.0%
TTATTGCACAGTTCATGATC+GGG + chr8_4:52400572-52400591 Msa1332430:CDS 35.0%
TTCTTGCAAGATCTCAAACT+TGG + chr8_4:52400673-52400692 Msa1332430:CDS 35.0%
TCTTGCAAGATCTCAAACTT+GGG + chr8_4:52400674-52400693 Msa1332430:CDS 35.0%
TTGAATTTCCAAATAGCTGG+TGG + chr8_4:52400818-52400837 Msa1332430:intron 35.0%
TGAATTTCCAAATAGCTGGT+GGG + chr8_4:52400819-52400838 Msa1332430:intron 35.0%
TAGCATAAAGGACATTTGCA+TGG + chr8_4:52400893-52400912 Msa1332430:CDS 35.0%
TCTGTTATATGGGGTTTGAT+CGG + chr8_4:52400978-52400997 Msa1332430:CDS 35.0%
CAACCAAGAATAACCATACA+AGG - chr8_4:52401043-52401062 None:intergenic 35.0%
CTTGTATGGTTATTCTTGGT+TGG + chr8_4:52401041-52401060 Msa1332430:CDS 35.0%
! ATTTTGCTAAACACCCAAAC+AGG - chr8_4:52401083-52401102 None:intergenic 35.0%
GGCTTTCTCTATTAGAATAC+AGG - chr8_4:52401440-52401459 None:intergenic 35.0%
AAATAGAGCCTAAGTCAACT+AGG - chr8_4:52401461-52401480 None:intergenic 35.0%
! TAGGTTTGGAGTATACCAAA+AGG + chr8_4:52401516-52401535 Msa1332430:three_prime_UTR 35.0%
! TATTTAGTCCCTTCACCTTT+TGG - chr8_4:52401534-52401553 None:intergenic 35.0%
!! ATGCTTCTTGCTTGTTATCA+CGG + chr8_4:52401581-52401600 Msa1332430:three_prime_UTR 35.0%
! TGTCAAATGACAGGTTGGAA+TGG - chr8_4:52396831-52396850 None:intergenic 40.0%
TGTTCTGTCAAATGACAGGT+TGG - chr8_4:52396836-52396855 None:intergenic 40.0%
!!! TTTGCTGCTTTTTCAGTGTC+TGG - chr8_4:52396990-52397009 None:intergenic 40.0%
GACACTGAAAAAGCAGCAAA+CGG + chr8_4:52396990-52397009 Msa1332430:CDS 40.0%
ACGAGAGCTACTTCTTCAAT+TGG - chr8_4:52397038-52397057 None:intergenic 40.0%
ACTTTCCGTTCATGGTTTCT+GGG + chr8_4:52397095-52397114 Msa1332430:CDS 40.0%
CAAATCGCTGTTCTTCCAAT+TGG + chr8_4:52397203-52397222 Msa1332430:CDS 40.0%
TCCTGGTCCGTTTAATATGA+AGG + chr8_4:52397292-52397311 Msa1332430:CDS 40.0%
TCCTTCATATTAAACGGACC+AGG - chr8_4:52397296-52397315 None:intergenic 40.0%
ATTCATCGTCTTAACCACTC+AGG + chr8_4:52397442-52397461 Msa1332430:CDS 40.0%
!! TGGTTGATGACGAAAAAGTG+TGG + chr8_4:52398385-52398404 Msa1332430:intron 40.0%
TAAAGAGAGAGACTTGTGCA+AGG - chr8_4:52398619-52398638 None:intergenic 40.0%
TTGCACAAGTCTCTCTCTTT+AGG + chr8_4:52398618-52398637 Msa1332430:CDS 40.0%
CACCAAGACAATGAAATGTG+TGG - chr8_4:52398807-52398826 None:intergenic 40.0%
! CAGTTTTTCCTCATTGCCAT+GGG + chr8_4:52399542-52399561 Msa1332430:CDS 40.0%
TTCTTGTATTATGCACTCCC+CGG + chr8_4:52399572-52399591 Msa1332430:CDS 40.0%
TAAGACGGTGAAAAGATAGC+CGG - chr8_4:52399594-52399613 None:intergenic 40.0%
CCGTCTTAACATTCTTCTCA+TGG + chr8_4:52399606-52399625 Msa1332430:CDS 40.0%
ACAGCACAACAAATTGGATC+AGG + chr8_4:52399656-52399675 Msa1332430:CDS 40.0%
CAAATTGGATCAGGTTACCA+TGG + chr8_4:52399665-52399684 Msa1332430:CDS 40.0%
TTGGTGCATTCACACTTGAT+TGG + chr8_4:52399696-52399715 Msa1332430:CDS 40.0%
TGGTGCATTCACACTTGATT+GGG + chr8_4:52399697-52399716 Msa1332430:CDS 40.0%
GCTGGAATTTCAGCTTATCA+TGG + chr8_4:52399719-52399738 Msa1332430:CDS 40.0%
TCCATTGTTAATGTTGGGGT+TGG + chr8_4:52399767-52399786 Msa1332430:CDS 40.0%
TCCAACCCCAACATTAACAA+TGG - chr8_4:52399771-52399790 None:intergenic 40.0%
AATCAGTTGTTCACGTCAAG+TGG + chr8_4:52399875-52399894 Msa1332430:CDS 40.0%
CACGACAAAGATCTTAACCA+AGG + chr8_4:52399910-52399929 Msa1332430:CDS 40.0%
TTCGCATTGTCTATTGGATC+AGG + chr8_4:52399992-52400011 Msa1332430:CDS 40.0%
AGCATTATTTCATGGCAGGT+AGG + chr8_4:52400048-52400067 Msa1332430:intron 40.0%
GAGACAGAGTAAATCAGCAA+TGG + chr8_4:52400181-52400200 Msa1332430:CDS 40.0%
ATAAGCAAGTACCAGAATGG+TGG + chr8_4:52400246-52400265 Msa1332430:CDS 40.0%
AAAATGAGGAACCACCATTC+TGG - chr8_4:52400260-52400279 None:intergenic 40.0%
CATGGCGCTATCTTTAGTAA+TGG + chr8_4:52400292-52400311 Msa1332430:CDS 40.0%
! TCTTTTGCTCGTAAGCAATG+AGG + chr8_4:52400473-52400492 Msa1332430:intron 40.0%
! AAGTTTGCAATTGGTTTCCC+AGG - chr8_4:52400607-52400626 None:intergenic 40.0%
GTGGATGTTGGATAGCATAA+AGG + chr8_4:52400881-52400900 Msa1332430:CDS 40.0%
GATTGTACCGAAACCTTGTA+TGG + chr8_4:52401027-52401046 Msa1332430:CDS 40.0%
! AGAGAAAGCCTAGTTGACTT+AGG + chr8_4:52401450-52401469 Msa1332430:three_prime_UTR 40.0%
!! TGTTTTTGCTTTTAGGGGTG+TGG + chr8_4:52401487-52401506 Msa1332430:three_prime_UTR 40.0%
TGGTATACTCCAAACCTAAC+TGG - chr8_4:52401514-52401533 None:intergenic 40.0%
TGGAGTATACCAAAAGGTGA+AGG + chr8_4:52401522-52401541 Msa1332430:three_prime_UTR 40.0%
GGAGTATACCAAAAGGTGAA+GGG + chr8_4:52401523-52401542 Msa1332430:three_prime_UTR 40.0%
!!! TGGTTTTTGGTAGTTGGTAC+AGG + chr8_4:52401715-52401734 Msa1332430:three_prime_UTR 40.0%
! GTGTCTGGAGTTGGATTCTT+TGG - chr8_4:52396975-52396994 None:intergenic 45.0%
!!! GCTTTTTCAGTGTCTGGAGT+TGG - chr8_4:52396984-52397003 None:intergenic 45.0%
AATTGGACATCTGTCGTCTG+GGG - chr8_4:52397021-52397040 None:intergenic 45.0%
CAATTGGACATCTGTCGTCT+GGG - chr8_4:52397022-52397041 None:intergenic 45.0%
TCAATTGGACATCTGTCGTC+TGG - chr8_4:52397023-52397042 None:intergenic 45.0%
CATGAACGGAAAGTCATGAC+TGG - chr8_4:52397089-52397108 None:intergenic 45.0%
CAGTCATGACTTTCCGTTCA+TGG + chr8_4:52397087-52397106 Msa1332430:CDS 45.0%
GACTTTCCGTTCATGGTTTC+TGG + chr8_4:52397094-52397113 Msa1332430:CDS 45.0%
! GCGGCCATGAATTTTCCAAT+TGG - chr8_4:52397221-52397240 None:intergenic 45.0%
AAACTCTTTCGTGGGAAGAG+TGG - chr8_4:52397243-52397262 None:intergenic 45.0%
GCTAACTGTGGTGTTTCTCA+AGG + chr8_4:52397338-52397357 Msa1332430:CDS 45.0%
AACTGTGGTGTTTCTCAAGG+TGG + chr8_4:52397341-52397360 Msa1332430:CDS 45.0%
!! TTTGTCTTTGAGACCCGTGA+AGG + chr8_4:52398237-52398256 Msa1332430:intron 45.0%
GAGTTGCAGATATTGGGCTA+TGG + chr8_4:52398533-52398552 Msa1332430:intron 45.0%
TGCAGATATTGGGCTATGGA+TGG + chr8_4:52398537-52398556 Msa1332430:intron 45.0%
GCAGATATTGGGCTATGGAT+GGG + chr8_4:52398538-52398557 Msa1332430:intron 45.0%
ATGGCCACCACATTTCAACA+GGG - chr8_4:52398592-52398611 None:intergenic 45.0%
GAGACTTGTGCAAGGTTTGA+TGG - chr8_4:52398611-52398630 None:intergenic 45.0%
AGCGCATCTTCACTACTGAA+AGG + chr8_4:52399211-52399230 Msa1332430:intron 45.0%
! ATGGAGTGCTCTGTAGCATA+AGG - chr8_4:52399483-52399502 None:intergenic 45.0%
! GCAGTTTTTCCTCATTGCCA+TGG + chr8_4:52399541-52399560 Msa1332430:CDS 45.0%
ATACAAGAAGCTAACGCCCA+TGG - chr8_4:52399561-52399580 None:intergenic 45.0%
AAGACGGTGAAAAGATAGCC+GGG - chr8_4:52399593-52399612 None:intergenic 45.0%
!! TCTCATGGATTTGCTACGCA+TGG + chr8_4:52399621-52399640 Msa1332430:CDS 45.0%
GGTTACCATGGACTTGGAAT+TGG + chr8_4:52399677-52399696 Msa1332430:CDS 45.0%
ATGCACCAATTCCAAGTCCA+TGG - chr8_4:52399685-52399704 None:intergenic 45.0%
TTCTACCCGTATGTTACTGG+AGG + chr8_4:52399813-52399832 Msa1332430:CDS 45.0%
ACAATGCGAAGAGAGGACTA+AGG - chr8_4:52399982-52400001 None:intergenic 45.0%
CCAATAGACAATGCGAAGAG+AGG - chr8_4:52399989-52400008 None:intergenic 45.0%
CCTCTCTTCGCATTGTCTAT+TGG + chr8_4:52399986-52400005 Msa1332430:CDS 45.0%
AAACGGATGTGCAACTTCCA+TGG + chr8_4:52400327-52400346 Msa1332430:CDS 45.0%
! TTGCTTGGATGACACCGATT+GGG - chr8_4:52400397-52400416 None:intergenic 45.0%
GAATGGAGTTAGTACCTGGT+TGG - chr8_4:52400423-52400442 None:intergenic 45.0%
AGCAATGAGGCGAAAGCAAT+AGG + chr8_4:52400486-52400505 Msa1332430:intron 45.0%
TGCTGCAAGGTAACCATCAT+AGG - chr8_4:52400538-52400557 None:intergenic 45.0%
! TTGCAATTGGTTTCCCAGGA+AGG - chr8_4:52400603-52400622 None:intergenic 45.0%
! CAAGAAAGAGAGTGCATGGA+CGG - chr8_4:52400659-52400678 None:intergenic 45.0%
! CTTGCAAGAAAGAGAGTGCA+TGG - chr8_4:52400663-52400682 None:intergenic 45.0%
TGTGCTGTATACATGCATCG+CGG - chr8_4:52400718-52400737 None:intergenic 45.0%
TAGTGTTCCCACCAGCTATT+TGG - chr8_4:52400829-52400848 None:intergenic 45.0%
! CTGTATTTGGGACAAGTCCA+AGG - chr8_4:52400942-52400961 None:intergenic 45.0%
AGTGTTGCCAGTTCCTGTTT+GGG + chr8_4:52401067-52401086 Msa1332430:CDS 45.0%
CTAAACACCCAAACAGGAAC+TGG - chr8_4:52401077-52401096 None:intergenic 45.0%
ATGTTAGTTGGAGTTGCAGG+TGG - chr8_4:52401173-52401192 None:intergenic 45.0%
GCAATGTTAGTTGGAGTTGC+AGG - chr8_4:52401176-52401195 None:intergenic 45.0%
CTCCAACTAACATTGCAAGC+TGG + chr8_4:52401180-52401199 Msa1332430:CDS 45.0%
AGCCAGCTTGCAATGTTAGT+TGG - chr8_4:52401185-52401204 None:intergenic 45.0%
ATTGCAAGCTGGCTATTGAC+CGG + chr8_4:52401191-52401210 Msa1332430:CDS 45.0%
ATTTCTGCCACCAACGTTTG+TGG - chr8_4:52401247-52401266 None:intergenic 45.0%
TTCTTCGCTCTGCAAAATGC+AGG + chr8_4:52401326-52401345 Msa1332430:CDS 45.0%
ATGCAGGCCATACTCTCAAA+TGG + chr8_4:52401342-52401361 Msa1332430:CDS 45.0%
AGGCCATACTCTCAAATGGT+GGG + chr8_4:52401346-52401365 Msa1332430:CDS 45.0%
TTCCCCACCATTTGAGAGTA+TGG - chr8_4:52401352-52401371 None:intergenic 45.0%
! CAAATGGTGGGGAACTGAAT+TGG + chr8_4:52401358-52401377 Msa1332430:CDS 45.0%
CAACCATCAACCACAATTCC+TGG - chr8_4:52401416-52401435 None:intergenic 45.0%
!! CTTCTTGCTTGTTATCACGG+AGG + chr8_4:52401584-52401603 Msa1332430:three_prime_UTR 45.0%
TTCACAATGCGTCCTCTCAG+CGG - chr8_4:52396792-52396811 None:intergenic 50.0%
ATTGGACATCTGTCGTCTGG+GGG - chr8_4:52397020-52397039 None:intergenic 50.0%
!! TAGAAGGGTCGTCGGTTTCA+GGG - chr8_4:52397064-52397083 None:intergenic 50.0%
!! ATAGAAGGGTCGTCGGTTTC+AGG - chr8_4:52397065-52397084 None:intergenic 50.0%
GACTGGAATAGAAGGGTCGT+CGG - chr8_4:52397072-52397091 None:intergenic 50.0%
TGGCGTTTCACGTTGAATCC+TGG + chr8_4:52397275-52397294 Msa1332430:CDS 50.0%
TGTGGTGTTTCTCAAGGTGG+TGG + chr8_4:52397344-52397363 Msa1332430:CDS 50.0%
! GGTGGTGATGCTTACTCCAT+TGG + chr8_4:52397362-52397381 Msa1332430:CDS 50.0%
ACGACCACGTTCAACCTTCA+CGG - chr8_4:52398254-52398273 None:intergenic 50.0%
ATATTGGGCTATGGATGGGC+TGG + chr8_4:52398542-52398561 Msa1332430:CDS 50.0%
! TATTGGGCTATGGATGGGCT+GGG + chr8_4:52398543-52398562 Msa1332430:CDS 50.0%
!! TGGGATTCTGAGGAGGTATC+TGG + chr8_4:52398562-52398581 Msa1332430:CDS 50.0%
!! GATTCTGAGGAGGTATCTGG+TGG + chr8_4:52398565-52398584 Msa1332430:CDS 50.0%
! TGGTGGACCCTGTTGAAATG+TGG + chr8_4:52398582-52398601 Msa1332430:CDS 50.0%
TGGACCCTGTTGAAATGTGG+TGG + chr8_4:52398585-52398604 Msa1332430:CDS 50.0%
GATGGCCACCACATTTCAAC+AGG - chr8_4:52398593-52398612 None:intergenic 50.0%
AATGGCTGTTGTGCCCACTA+AGG - chr8_4:52399155-52399174 None:intergenic 50.0%
AGACGGTGAAAAGATAGCCG+GGG - chr8_4:52399592-52399611 None:intergenic 50.0%
GGATCAGGTTACCATGGACT+TGG + chr8_4:52399671-52399690 Msa1332430:CDS 50.0%
GCATTCACACTTGATTGGGC+TGG + chr8_4:52399701-52399720 Msa1332430:CDS 50.0%
AAGTCCATGGTGCAACAAGG+GGG - chr8_4:52399748-52399767 None:intergenic 50.0%
GAAGTCCATGGTGCAACAAG+GGG - chr8_4:52399749-52399768 None:intergenic 50.0%
GGAAGTCCATGGTGCAACAA+GGG - chr8_4:52399750-52399769 None:intergenic 50.0%
TGGAAGTCCATGGTGCAACA+AGG - chr8_4:52399751-52399770 None:intergenic 50.0%
GGATGTGCAACTTCCATGGT+GGG + chr8_4:52400331-52400350 Msa1332430:CDS 50.0%
GATGTGCAACTTCCATGGTG+GGG + chr8_4:52400332-52400351 Msa1332430:CDS 50.0%
! TGGGGCATGCTCTTTGCTTT+TGG + chr8_4:52400350-52400369 Msa1332430:CDS 50.0%
GTTGCTTGGATGACACCGAT+TGG - chr8_4:52400398-52400417 None:intergenic 50.0%
CATCCAAGCAACTACCAACC+AGG + chr8_4:52400406-52400425 Msa1332430:CDS 50.0%
!! GTACCTGGTTGGTAGTTGCT+TGG - chr8_4:52400412-52400431 None:intergenic 50.0%
ATGGTTACCTTGCAGCAACC+TGG + chr8_4:52400541-52400560 Msa1332430:intron 50.0%
GTCATATCCAGGTTGCTGCA+AGG - chr8_4:52400551-52400570 None:intergenic 50.0%
ATGATCGGGTATCTCCTTCC+TGG + chr8_4:52400586-52400605 Msa1332430:CDS 50.0%
TGATCGGGTATCTCCTTCCT+GGG + chr8_4:52400587-52400606 Msa1332430:CDS 50.0%
TGCTGTATACATGCATCGCG+GGG - chr8_4:52400716-52400735 None:intergenic 50.0%
GTGCTGTATACATGCATCGC+GGG - chr8_4:52400717-52400736 None:intergenic 50.0%
GCGATGCATGTATACAGCAC+AGG + chr8_4:52400717-52400736 Msa1332430:CDS 50.0%
TGGAGTGGTGAACCTTTCAG+TGG + chr8_4:52400854-52400873 Msa1332430:CDS 50.0%
TGGTGAACCTTTCAGTGGCT+TGG + chr8_4:52400859-52400878 Msa1332430:CDS 50.0%
! TGAACCTTTCAGTGGCTTGG+TGG + chr8_4:52400862-52400881 Msa1332430:CDS 50.0%
ACATCCACCAAGCCACTGAA+AGG - chr8_4:52400869-52400888 None:intergenic 50.0%
!! TTCAGTGGCTTGGTGGATGT+TGG + chr8_4:52400869-52400888 Msa1332430:CDS 50.0%
AAGCTCACCATGACAGTCCT+TGG + chr8_4:52400922-52400941 Msa1332430:CDS 50.0%
GACAAGTCCAAGGACTGTCA+TGG - chr8_4:52400932-52400951 None:intergenic 50.0%
AGGTTTCGGTACAATCCACC+TGG - chr8_4:52401023-52401042 None:intergenic 50.0%
CAGTGTTGCCAGTTCCTGTT+TGG + chr8_4:52401066-52401085 Msa1332430:CDS 50.0%
TGTTCCGCTTCCACAAACGT+TGG + chr8_4:52401234-52401253 Msa1332430:CDS 50.0%
! TGATGCAGGCACGGCTTTTA+TGG + chr8_4:52401292-52401311 Msa1332430:CDS 50.0%
! GATGCAGGCACGGCTTTTAT+GGG + chr8_4:52401293-52401312 Msa1332430:CDS 50.0%
CAGGCCATACTCTCAAATGG+TGG + chr8_4:52401345-52401364 Msa1332430:CDS 50.0%
GGCCATACTCTCAAATGGTG+GGG + chr8_4:52401347-52401366 Msa1332430:CDS 50.0%
TGAATTGGACCATTGCCCGT+TGG + chr8_4:52401373-52401392 Msa1332430:CDS 50.0%
CCACAATTCCTGGAGCAGTT+GGG - chr8_4:52401406-52401425 None:intergenic 50.0%
ACCACAATTCCTGGAGCAGT+TGG - chr8_4:52401407-52401426 None:intergenic 50.0%
GCTCCAGGAATTGTGGTTGA+TGG + chr8_4:52401410-52401429 Msa1332430:CDS 50.0%
! TTTAGGGGTGTGGACCAGTT+AGG + chr8_4:52401497-52401516 Msa1332430:three_prime_UTR 50.0%
CTCTTTCGTGGGAAGAGTGG+CGG - chr8_4:52397240-52397259 None:intergenic 55.0%
AGACCCGTGAAGGTTGAACG+TGG + chr8_4:52398247-52398266 Msa1332430:intron 55.0%
CGACCACGTTCAACCTTCAC+GGG - chr8_4:52398253-52398272 None:intergenic 55.0%
!! ATGGATGGGCTGGGATTCTG+AGG + chr8_4:52398552-52398571 Msa1332430:CDS 55.0%
AGCTAACGCCCATGGCAATG+AGG - chr8_4:52399553-52399572 None:intergenic 55.0%
CGGATGTGCAACTTCCATGG+TGG + chr8_4:52400330-52400349 Msa1332430:CDS 55.0%
GCTGTATACATGCATCGCGG+GGG - chr8_4:52400715-52400734 None:intergenic 55.0%
CTGGTGGGAACACTAGTTGC+TGG + chr8_4:52400834-52400853 Msa1332430:CDS 55.0%
GGGAACACTAGTTGCTGGAG+TGG + chr8_4:52400839-52400858 Msa1332430:CDS 55.0%
ATCGGACCGAAGCGGCTATT+CGG + chr8_4:52400996-52401015 Msa1332430:CDS 55.0%
TCCGCTTCCACAAACGTTGG+TGG + chr8_4:52401237-52401256 Msa1332430:CDS 55.0%
GCCACCAACGTTTGTGGAAG+CGG - chr8_4:52401241-52401260 None:intergenic 55.0%
CAGTTGGGCAAGTAGCCAAC+GGG - chr8_4:52401391-52401410 None:intergenic 55.0%
GCAGTTGGGCAAGTAGCCAA+CGG - chr8_4:52401392-52401411 None:intergenic 55.0%
CCCAACTGCTCCAGGAATTG+TGG + chr8_4:52401403-52401422 Msa1332430:CDS 55.0%
GGGTGTGGACCAGTTAGGTT+TGG + chr8_4:52401502-52401521 Msa1332430:three_prime_UTR 55.0%
!! GATGGGCTGGGATTCTGAGG+AGG + chr8_4:52398555-52398574 Msa1332430:CDS 60.0%
GAAGCCCCCTTGTTGCACCA+TGG + chr8_4:52399741-52399760 Msa1332430:CDS 60.0%
! GCAAAGAGCATGCCCCACCA+TGG - chr8_4:52400347-52400366 None:intergenic 60.0%
GGGGTTTGATCGGACCGAAG+CGG + chr8_4:52400988-52401007 Msa1332430:CDS 60.0%
CCTGGTCCGAATAGCCGCTT+CGG - chr8_4:52401005-52401024 None:intergenic 60.0%
AAGCGGCTATTCGGACCAGG+TGG + chr8_4:52401005-52401024 Msa1332430:CDS 60.0%
GGCAAGTAGCCAACGGGCAA+TGG - chr8_4:52401385-52401404 None:intergenic 60.0%
GCTACTTGCCCAACTGCTCC+AGG + chr8_4:52401395-52401414 Msa1332430:CDS 60.0%
CCGAAGCGGCTATTCGGACC+AGG + chr8_4:52401002-52401021 Msa1332430:CDS 65.0%
CTATCCGCGGCGCTTGATGC+AGG + chr8_4:52401278-52401297 Msa1332430:CDS 65.0%
! CGTGCCTGCATCAAGCGCCG+CGG - chr8_4:52401285-52401304 None:intergenic 70.0%
CGCGGCGCTTGATGCAGGCA+CGG + chr8_4:52401283-52401302 Msa1332430:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 52396787 52401779 52396787 ID=Msa1332430;Name=Msa1332430
chr8_4 mRNA 52396787 52401779 52396787 ID=Msa1332430-mRNA-1;Parent=Msa1332430;Name=Msa1332430-mRNA-1;_AED=0.04;_eAED=0.04;_QI=179|1|1|1|1|1|6|331|740
chr8_4 exon 52396787 52397463 52396787 ID=Msa1332430-mRNA-1:exon:15721;Parent=Msa1332430-mRNA-1
chr8_4 exon 52398542 52398639 52398542 ID=Msa1332430-mRNA-1:exon:15722;Parent=Msa1332430-mRNA-1
chr8_4 exon 52399493 52400065 52399493 ID=Msa1332430-mRNA-1:exon:15723;Parent=Msa1332430-mRNA-1
chr8_4 exon 52400172 52400427 52400172 ID=Msa1332430-mRNA-1:exon:15724;Parent=Msa1332430-mRNA-1
chr8_4 exon 52400556 52400738 52400556 ID=Msa1332430-mRNA-1:exon:15725;Parent=Msa1332430-mRNA-1
chr8_4 exon 52400834 52401779 52400834 ID=Msa1332430-mRNA-1:exon:15726;Parent=Msa1332430-mRNA-1
chr8_4 five_prime_UTR 52396787 52396965 52396787 ID=Msa1332430-mRNA-1:five_prime_utr;Parent=Msa1332430-mRNA-1
chr8_4 CDS 52396966 52397463 52396966 ID=Msa1332430-mRNA-1:cds;Parent=Msa1332430-mRNA-1
chr8_4 CDS 52398542 52398639 52398542 ID=Msa1332430-mRNA-1:cds;Parent=Msa1332430-mRNA-1
chr8_4 CDS 52399493 52400065 52399493 ID=Msa1332430-mRNA-1:cds;Parent=Msa1332430-mRNA-1
chr8_4 CDS 52400172 52400427 52400172 ID=Msa1332430-mRNA-1:cds;Parent=Msa1332430-mRNA-1
chr8_4 CDS 52400556 52400738 52400556 ID=Msa1332430-mRNA-1:cds;Parent=Msa1332430-mRNA-1
chr8_4 CDS 52400834 52401448 52400834 ID=Msa1332430-mRNA-1:cds;Parent=Msa1332430-mRNA-1
chr8_4 three_prime_UTR 52401449 52401779 52401449 ID=Msa1332430-mRNA-1:three_prime_utr;Parent=Msa1332430-mRNA-1
Gene Sequence

>Msa1332430

ATGGCGCCAAAGAATCCAACTCCAGACACTGAAAAAGCAGCAAACGGTGTTCCCCCAGACGACAGATGTCCAATTGAAGAAGTAGCTCTCGTCGTCCCTGAAACCGACGACCCTTCTATTCCAGTCATGACTTTCCGTTCATGGTTTCTGGGAATTACTTCTTGCATCATTCTCATCTTTCTCAACACTTTCTTCACTTTCAGAACTCAACCACTAACCATTTCTGCTATTCTTATGCAAATCGCTGTTCTTCCAATTGGAAAATTCATGGCCGCCACTCTTCCCACGAAAGAGTTTAACTTTTTTGGGTGGCGTTTCACGTTGAATCCTGGTCCGTTTAATATGAAGGAGCATGTTATTATCACTATTTTTGCTAACTGTGGTGTTTCTCAAGGTGGTGGTGATGCTTACTCCATTGGTGCTATTACTATTATGAAAGCTTATTACAAACAATCTCTCAGTTTTCTCCTTGCTCTATTCATCGTCTTAACCACTCAGATATTGGGCTATGGATGGGCTGGGATTCTGAGGAGGTATCTGGTGGACCCTGTTGAAATGTGGTGGCCATCAAACCTTGCACAAGTCTCTCTCTTTAGAGCACTCCATGAAAAAGAGAATAAATCATCAAAAGGCTTTACAAGGATGCAGTTTTTCCTCATTGCCATGGGCGTTAGCTTCTTGTATTATGCACTCCCCGGCTATCTTTTCACCGTCTTAACATTCTTCTCATGGATTTGCTACGCATGGCCACATAATATCACAGCACAACAAATTGGATCAGGTTACCATGGACTTGGAATTGGTGCATTCACACTTGATTGGGCTGGAATTTCAGCTTATCATGGAAGCCCCCTTGTTGCACCATGGACTTCCATTGTTAATGTTGGGGTTGGATTTATCATGTTCATCTATATAATTCTACCCGTATGTTACTGGAGGTTTAACACTTTTGATGCTAGGAAGTTTCCTATATTCTCTAATCAGTTGTTCACGTCAAGTGGACACAAGTATGACACGACAAAGATCTTAACCAAGGAATATGATCTTAACATTGATGCATACAACAAGTATGGCAAGTTATACCTTAGTCCTCTCTTCGCATTGTCTATTGGATCAGGTTTTGCAAGATTTACGGCGACCCTCACTCATGTAGCATTATTTCATGGCAGAGACATATTGAGACAGAGTAAATCAGCAATGGGTAACGTAAAAGTTGATGTGCATGGTAGACTCATGAAAGCTTATAAGCAAGTACCAGAATGGTGGTTCCTCATTTTATTATTTGGAAGCATGGCGCTATCTTTAGTAATGGCTTTTGTTTGGAAAACGGATGTGCAACTTCCATGGTGGGGCATGCTCTTTGCTTTTGGCTTAGCTTTTGTTGTAACTCTCCCAATCGGTGTCATCCAAGCAACTACCAACCAGCAACCTGGATATGACATTATTGCACAGTTCATGATCGGGTATCTCCTTCCTGGGAAACCAATTGCAAACTTGCTCTTTAAGATTTATGGGAGAATCAGCACCGTCCATGCACTCTCTTTCTTGCAAGATCTCAAACTTGGGCACTACATGAAAATTCCCCCGCGATGCATGTATACAGCACAGCTGGTGGGAACACTAGTTGCTGGAGTGGTGAACCTTTCAGTGGCTTGGTGGATGTTGGATAGCATAAAGGACATTTGCATGGATGATAAAGCTCACCATGACAGTCCTTGGACTTGTCCCAAATACAGAGTGACATTTGATGCATCTGTTATATGGGGTTTGATCGGACCGAAGCGGCTATTCGGACCAGGTGGATTGTACCGAAACCTTGTATGGTTATTCTTGGTTGGAGCAGTGTTGCCAGTTCCTGTTTGGGTGTTTAGCAAAATCTACCCTAATAAGAAATGGATTCCTCTGATAAACATACCAGTTATATCTTATGGTTTTGCTGGAATGCCACCTGCAACTCCAACTAACATTGCAAGCTGGCTATTGACCGGAATGATCTTCAACTACTTTGTGTTCCGCTTCCACAAACGTTGGTGGCAGAAATATAATTATGTTCTATCCGCGGCGCTTGATGCAGGCACGGCTTTTATGGGTGTTTTGATTTTCTTCGCTCTGCAAAATGCAGGCCATACTCTCAAATGGTGGGGAACTGAATTGGACCATTGCCCGTTGGCTACTTGCCCAACTGCTCCAGGAATTGTGGTTGATGGTTGTCCTGTATTCTAA
Protein sequence

>Msa1332430

MAPKNPTPDTEKAANGVPPDDRCPIEEVALVVPETDDPSIPVMTFRSWFLGITSCIILIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMAATLPTKEFNFFGWRFTLNPGPFNMKEHVIITIFANCGVSQGGGDAYSIGAITIMKAYYKQSLSFLLALFIVLTTQILGYGWAGILRRYLVDPVEMWWPSNLAQVSLFRALHEKENKSSKGFTRMQFFLIAMGVSFLYYALPGYLFTVLTFFSWICYAWPHNITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVAPWTSIVNVGVGFIMFIYIILPVCYWRFNTFDARKFPIFSNQLFTSSGHKYDTTKILTKEYDLNIDAYNKYGKLYLSPLFALSIGSGFARFTATLTHVALFHGRDILRQSKSAMGNVKVDVHGRLMKAYKQVPEWWFLILLFGSMALSLVMAFVWKTDVQLPWWGMLFAFGLAFVVTLPIGVIQATTNQQPGYDIIAQFMIGYLLPGKPIANLLFKIYGRISTVHALSFLQDLKLGHYMKIPPRCMYTAQLVGTLVAGVVNLSVAWWMLDSIKDICMDDKAHHDSPWTCPKYRVTFDASVIWGLIGPKRLFGPGGLYRNLVWLFLVGAVLPVPVWVFSKIYPNKKWIPLINIPVISYGFAGMPPATPTNIASWLLTGMIFNYFVFRFHKRWWQKYNYVLSAALDAGTAFMGVLIFFALQNAGHTLKWWGTELDHCPLATCPTAPGIVVDGCPVF*