AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1389100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389100 MtrunA17_Chr4g0076281 99.190 741 5 1 1 740 1 741 0.0 1503
Msa1389100 MtrunA17_Chr3g0119871 54.910 723 314 5 20 740 24 736 0.0 846
Msa1389100 MtrunA17_Chr2g0279871 53.986 715 323 3 28 739 28 739 0.0 829
Msa1389100 MtrunA17_Chr4g0049511 52.767 741 344 4 4 740 2 740 0.0 827
Msa1389100 MtrunA17_Chr3g0141131 52.394 731 338 5 14 740 2 726 0.0 820
Msa1389100 MtrunA17_Chr5g0446791 52.267 750 336 10 6 740 10 752 0.0 793
Msa1389100 MtrunA17_Chr8g0360211 51.801 722 341 4 21 740 23 739 0.0 777
Msa1389100 MtrunA17_Chr7g0257931 49.459 740 358 8 9 740 21 752 0.0 769
Msa1389100 MtrunA17_Chr5g0446821 49.802 759 334 8 24 740 20 773 0.0 756
Msa1389100 MtrunA17_Chr7g0257941 49.724 724 351 7 21 736 61 779 0.0 733
Msa1389100 MtrunA17_Chr7g0257971 47.043 727 335 8 21 739 51 735 0.0 682
Msa1389100 MtrunA17_Chr5g0446811 50.365 548 264 6 200 740 16 562 0.0 566
Msa1389100 MtrunA17_Chr4g0075771 57.278 316 38 7 215 527 1 222 2.08e-94 293
Msa1389100 MtrunA17_Chr5g0446801 56.983 179 71 2 23 199 20 194 1.15e-61 206
Msa1389100 MtrunA17_Chr5g0437391 84.615 39 6 0 638 676 302 340 1.56e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389100 AT4G16370.1 83.311 737 117 2 9 740 2 737 0.0 1286
Msa1389100 AT5G64410.1 53.909 729 329 3 14 739 4 728 0.0 844
Msa1389100 AT1G09930.1 53.920 727 330 3 15 740 12 734 0.0 839
Msa1389100 AT4G10770.1 54.659 719 315 5 24 740 56 765 0.0 830
Msa1389100 AT4G27730.1 52.893 726 332 6 20 740 16 736 0.0 793
Msa1389100 AT4G26590.1 53.224 729 327 8 21 740 30 753 0.0 784
Msa1389100 AT5G53520.1 50.476 735 354 6 10 740 5 733 0.0 766
Msa1389100 AT5G55930.1 51.265 751 348 9 3 740 10 755 0.0 759
Msa1389100 AT5G53510.1 51.724 725 340 6 21 740 22 741 0.0 743
Msa1389100 AT4G10770.2 53.874 555 252 2 186 740 1 551 0.0 639

Find 230 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTCCGTTCATGGTTTC+TGG 0.067027 tig0021212:+72838 Msa1389100:CDS
AACTTGCTCTTTAAGATTTA+TGG 0.075578 tig0021212:+76035 Msa1389100:CDS
AGAGGAATCCATTTCTTATT+AGG 0.117365 tig0021212:-76520 None:intergenic
ATCAAATGTCACTCTGTATT+TGG 0.125563 tig0021212:-76365 None:intergenic
ATAGAAGGGTCGTCGGTTTC+AGG 0.219683 tig0021212:-72806 None:intergenic
AACATACCAGTTATATCTTA+TGG 0.249371 tig0021212:+76547 Msa1389100:CDS
CCTCTCTTCGCATTGTCTAT+TGG 0.252317 tig0021212:+75399 Msa1389100:CDS
CATTTGATGCATCTGTTATA+TGG 0.253153 tig0021212:+76380 Msa1389100:CDS
TGGGGCATGCTCTTTGCTTT+TGG 0.255507 tig0021212:+75763 Msa1389100:CDS
TATTTAGTCCCTTCACCTTT+TGG 0.258287 tig0021212:-76944 None:intergenic
CAGTCATGACTTTCCGTTCA+TGG 0.259187 tig0021212:+72831 Msa1389100:CDS
TTCCCCACCATTTGAGAGTA+TGG 0.265799 tig0021212:-76762 None:intergenic
TTGCACAAGTCTCTCTCTTT+AGG 0.271929 tig0021212:+74031 Msa1389100:CDS
GTGTCTGGAGTTGGATTCTT+TGG 0.283544 tig0021212:-72716 None:intergenic
GAGGAATCCATTTCTTATTA+GGG 0.287451 tig0021212:-76519 None:intergenic
GGACTTCCATTGTTAATGTT+GGG 0.298039 tig0021212:+75175 Msa1389100:CDS
AAACCTTGTATGGTTATTCT+TGG 0.307696 tig0021212:+76450 Msa1389100:CDS
ACTTGCTCTTTAAGATTTAT+GGG 0.308701 tig0021212:+76036 Msa1389100:CDS
TAATTCTACCCGTATGTTAC+TGG 0.309917 tig0021212:+75223 Msa1389100:CDS
TCAATTGGACATCTGTCGTC+TGG 0.310442 tig0021212:-72764 None:intergenic
TATATTCAGTTAACTGATAA+TGG 0.310802 tig0021212:+77060 Msa1389100:three_prime_UTR
AATATCACAGCACAACAAAT+TGG 0.314764 tig0021212:+75063 Msa1389100:CDS
CAGTGTTGCCAGTTCCTGTT+TGG 0.322093 tig0021212:+76479 Msa1389100:CDS
TAAATTGAGTTGCAGATATT+GGG 0.332470 tig0021212:+73940 Msa1389100:intron
TGGGATTCTGAGGAGGTATC+TGG 0.336220 tig0021212:+73975 Msa1389100:CDS
TTCTCTTCTCTTATCTTCAA+TGG 0.338143 tig0021212:+72691 Msa1389100:exon
ACTGAATATATCCATAAATA+AGG 0.347320 tig0021212:-77047 None:intergenic
GCAATGTTAGTTGGAGTTGC+AGG 0.354795 tig0021212:-76586 None:intergenic
CAAATCGCTGTTCTTCCAAT+TGG 0.356781 tig0021212:+72947 Msa1389100:CDS
TGGTATACTCCAAACCTAAC+TGG 0.358374 tig0021212:-76924 None:intergenic
TCTTCCAATTGGAAAATTCA+TGG 0.361492 tig0021212:+72958 Msa1389100:CDS
CAAATGGTGGGGAACTGAAT+TGG 0.363146 tig0021212:+76771 Msa1389100:CDS
CATAATAATTGCTAAGCAAT+TGG 0.371780 tig0021212:-76968 None:intergenic
ATTGATGCATACAACAAGTA+TGG 0.374972 tig0021212:+75360 Msa1389100:CDS
TTTAGGGGTGTGGACCAGTT+AGG 0.376183 tig0021212:+76910 Msa1389100:three_prime_UTR
ACTCATGTAGCATTATTTCA+TGG 0.378517 tig0021212:+75453 Msa1389100:CDS
GGTTACCATGGACTTGGAAT+TGG 0.380324 tig0021212:+75090 Msa1389100:CDS
GAGACTTGTGCAAGGTTTGA+TGG 0.380591 tig0021212:-74021 None:intergenic
TTGGTGCATTCACACTTGAT+TGG 0.389457 tig0021212:+75109 Msa1389100:CDS
ACGAGAGCTACTTCTTCAAT+TGG 0.390352 tig0021212:-72779 None:intergenic
GGGTGTGGACCAGTTAGGTT+TGG 0.390748 tig0021212:+76915 Msa1389100:three_prime_UTR
TTCTTGCAAGATCTCAAACT+TGG 0.392501 tig0021212:+76086 Msa1389100:CDS
TCAAATGTCACTCTGTATTT+GGG 0.393782 tig0021212:-76364 None:intergenic
ACTTTCCGTTCATGGTTTCT+GGG 0.394577 tig0021212:+72839 Msa1389100:CDS
GATGGCCACCACATTTCAAC+AGG 0.394766 tig0021212:-74003 None:intergenic
ATGATCGGGTATCTCCTTCC+TGG 0.395403 tig0021212:+75999 Msa1389100:CDS
AAAATGAGGAACCACCATTC+TGG 0.396998 tig0021212:-75670 None:intergenic
TTCGCATTGTCTATTGGATC+AGG 0.399417 tig0021212:+75405 Msa1389100:CDS
TTAAAGAGCAAGTTTGCAAT+TGG 0.399423 tig0021212:-76026 None:intergenic
ATTTGATGCATCTGTTATAT+GGG 0.400325 tig0021212:+76381 Msa1389100:CDS
TCCATTGTTAATGTTGGGGT+TGG 0.406267 tig0021212:+75180 Msa1389100:CDS
TTGCATAAGAATAGCAGAAA+TGG 0.413613 tig0021212:-72927 None:intergenic
GCAAAACCATAAGATATAAC+TGG 0.414513 tig0021212:-76553 None:intergenic
GCCACCAACGTTTGTGGAAG+CGG 0.418100 tig0021212:-76651 None:intergenic
TGGCGTTTCACGTTGAATCC+TGG 0.422294 tig0021212:+73019 Msa1389100:CDS
GGCTTTCTCTATTAGAATAC+AGG 0.423380 tig0021212:-76850 None:intergenic
CAACCATCAACCACAATTCC+TGG 0.425417 tig0021212:-76826 None:intergenic
CTTGTATGGTTATTCTTGGT+TGG 0.425735 tig0021212:+76454 Msa1389100:CDS
AAATCTACCCTAATAAGAAA+TGG 0.430734 tig0021212:+76512 Msa1389100:CDS
CTGGTGGGAACACTAGTTGC+TGG 0.432578 tig0021212:+76247 Msa1389100:CDS
ATCGGACCGAAGCGGCTATT+CGG 0.432929 tig0021212:+76409 Msa1389100:CDS
AAAGTCATGACTGGAATAGA+AGG 0.434612 tig0021212:-72821 None:intergenic
CTAAACACCCAAACAGGAAC+TGG 0.434990 tig0021212:-76487 None:intergenic
AGTGTTGCCAGTTCCTGTTT+GGG 0.439349 tig0021212:+76480 Msa1389100:CDS
GCTCCAGGAATTGTGGTTGA+TGG 0.439708 tig0021212:+76823 Msa1389100:CDS
ACATGCTCCTTCATATTAAA+CGG 0.440905 tig0021212:-73043 None:intergenic
CTATCCGCGGCGCTTGATGC+AGG 0.442801 tig0021212:+76691 Msa1389100:CDS
ATTTCTGCCACCAACGTTTG+TGG 0.444531 tig0021212:-76657 None:intergenic
CCGTCTTAACATTCTTCTCA+TGG 0.444739 tig0021212:+75019 Msa1389100:CDS
GATTGTACCGAAACCTTGTA+TGG 0.445058 tig0021212:+76440 Msa1389100:CDS
TAGAAGGGTCGTCGGTTTCA+GGG 0.446344 tig0021212:-72805 None:intergenic
AGCCAGCTTGCAATGTTAGT+TGG 0.448468 tig0021212:-76595 None:intergenic
GTACCTGGTTGGTAGTTGCT+TGG 0.449016 tig0021212:-75822 None:intergenic
TGGACTTCCATTGTTAATGT+TGG 0.454339 tig0021212:+75174 Msa1389100:CDS
TGGTGCATTCACACTTGATT+GGG 0.454657 tig0021212:+75110 Msa1389100:CDS
AATGTTAAGATCATATTCCT+TGG 0.457676 tig0021212:-75340 None:intergenic
GTGGATGTTGGATAGCATAA+AGG 0.461735 tig0021212:+76294 Msa1389100:CDS
CAATTGGACATCTGTCGTCT+GGG 0.463466 tig0021212:-72763 None:intergenic
CCCAACTGCTCCAGGAATTG+TGG 0.465847 tig0021212:+76816 Msa1389100:CDS
TTCTTGTTCTGTCAAATGAC+AGG 0.467690 tig0021212:-72581 None:intergenic
GCTACTTGCCCAACTGCTCC+AGG 0.469429 tig0021212:+76808 Msa1389100:CDS
AGAATAACCATACAAGGTTT+CGG 0.470528 tig0021212:-76447 None:intergenic
ATATTGGGCTATGGATGGGC+TGG 0.471536 tig0021212:+73955 Msa1389100:CDS
TTCAGTGGCTTGGTGGATGT+TGG 0.472380 tig0021212:+76282 Msa1389100:CDS
TTCTTCGCTCTGCAAAATGC+AGG 0.473572 tig0021212:+76739 Msa1389100:CDS
ATGCTTCTTGCTTGTTATCA+CGG 0.476348 tig0021212:+76994 Msa1389100:three_prime_UTR
AAGCTCACCATGACAGTCCT+TGG 0.477430 tig0021212:+76335 Msa1389100:CDS
TGCAGATATTGGGCTATGGA+TGG 0.480173 tig0021212:+73950 Msa1389100:intron
TGGTGAACCTTTCAGTGGCT+TGG 0.483420 tig0021212:+76272 Msa1389100:CDS
GGATCAGGTTACCATGGACT+TGG 0.486591 tig0021212:+75084 Msa1389100:CDS
ACCACAATTCCTGGAGCAGT+TGG 0.490448 tig0021212:-76817 None:intergenic
CCTGGTCCGAATAGCCGCTT+CGG 0.490623 tig0021212:-76415 None:intergenic
GTGCTGTATACATGCATCGC+GGG 0.491917 tig0021212:-76127 None:intergenic
AAAGAGAATAAATCATCAAA+AGG 0.492126 tig0021212:+74919 Msa1389100:CDS
TTGCTTGGATGACACCGATT+GGG 0.492702 tig0021212:-75807 None:intergenic
TGAACCTTTCAGTGGCTTGG+TGG 0.493204 tig0021212:+76275 Msa1389100:CDS
CATGGCGCTATCTTTAGTAA+TGG 0.493754 tig0021212:+75705 Msa1389100:CDS
GCTAACTGTGGTGTTTCTCA+AGG 0.493992 tig0021212:+73082 Msa1389100:CDS
ATGTAGCATTATTTCATGGC+AGG 0.497819 tig0021212:+75457 Msa1389100:CDS
ACAGAATATATAATATCAAA+AGG 0.499157 tig0021212:+77172 Msa1389100:three_prime_UTR
TCTTGCAAGATCTCAAACTT+GGG 0.499677 tig0021212:+76087 Msa1389100:CDS
CAGTTGGGCAAGTAGCCAAC+GGG 0.500085 tig0021212:-76801 None:intergenic
AACAACTGATTAGAGAATAT+AGG 0.501653 tig0021212:-75276 None:intergenic
GCATTCACACTTGATTGGGC+TGG 0.502823 tig0021212:+75114 Msa1389100:CDS
GCTGGAATTTCAGCTTATCA+TGG 0.502833 tig0021212:+75132 Msa1389100:CDS
TTTGTTGTAACTCTCCCAAT+CGG 0.506469 tig0021212:+75793 Msa1389100:CDS
AAGTTTGCAATTGGTTTCCC+AGG 0.508014 tig0021212:-76017 None:intergenic
GGCAAGTAGCCAACGGGCAA+TGG 0.509667 tig0021212:-76795 None:intergenic
TCCTGGTCCGTTTAATATGA+AGG 0.510592 tig0021212:+73036 Msa1389100:CDS
ATGCAGGCCATACTCTCAAA+TGG 0.511772 tig0021212:+76755 Msa1389100:CDS
GACTTCCATTGTTAATGTTG+GGG 0.513380 tig0021212:+75176 Msa1389100:CDS
AGACAGAGTAAATCAGCAAT+GGG 0.519389 tig0021212:+75595 Msa1389100:CDS
ATTATTGCACAGTTCATGAT+CGG 0.519983 tig0021212:+75984 Msa1389100:CDS
CGCGGCGCTTGATGCAGGCA+CGG 0.520662 tig0021212:+76696 Msa1389100:CDS
AATCAGTTGTTCACGTCAAG+TGG 0.522906 tig0021212:+75288 Msa1389100:CDS
TCTGTTATATGGGGTTTGAT+CGG 0.525236 tig0021212:+76391 Msa1389100:CDS
TCTCATGGATTTGCTACGCA+TGG 0.525558 tig0021212:+75034 Msa1389100:CDS
TTATTGCACAGTTCATGATC+GGG 0.526020 tig0021212:+75985 Msa1389100:CDS
ATGGTTACCTTGCAGCAACC+TGG 0.527539 tig0021212:+75954 Msa1389100:intron
CCACAATTCCTGGAGCAGTT+GGG 0.528952 tig0021212:-76816 None:intergenic
AGAATAGCAGAAATGGTTAG+TGG 0.530312 tig0021212:-72920 None:intergenic
AAGACGGTGAAAAGATAGCC+GGG 0.530909 tig0021212:-75003 None:intergenic
TGTTCTGTCAAATGACAGGT+TGG 0.532135 tig0021212:-72577 None:intergenic
TCCGCTTCCACAAACGTTGG+TGG 0.532601 tig0021212:+76650 Msa1389100:CDS
TTGCAATTGGTTTCCCAGGA+AGG 0.533006 tig0021212:-76013 None:intergenic
TGTTGTGCTGTGATATTATG+TGG 0.533560 tig0021212:-75057 None:intergenic
CATAATAGTAATAGCACCAA+TGG 0.534949 tig0021212:-73122 None:intergenic
TGTCAAATGACAGGTTGGAA+TGG 0.538022 tig0021212:-72572 None:intergenic
GGTGGTGATGCTTACTCCAT+TGG 0.540854 tig0021212:+73106 Msa1389100:CDS
AGAGAAAGCCTAGTTGACTT+AGG 0.541749 tig0021212:+76863 Msa1389100:three_prime_UTR
GTTAAACCTCCAGTAACATA+CGG 0.543093 tig0021212:-75232 None:intergenic
AATCATCAAAAGGCTTTACA+AGG 0.543100 tig0021212:+74929 Msa1389100:CDS
TTCTTGTATTATGCACTCCC+CGG 0.543396 tig0021212:+74985 Msa1389100:CDS
AAAGTAGTTGAAGATCATTC+CGG 0.548296 tig0021212:-76623 None:intergenic
TATTGGGCTATGGATGGGCT+GGG 0.548491 tig0021212:+73956 Msa1389100:CDS
AATATATCCATAAATAAGGC+AGG 0.549588 tig0021212:-77043 None:intergenic
ACAGCACAACAAATTGGATC+AGG 0.552728 tig0021212:+75069 Msa1389100:CDS
TGGAAGTCCATGGTGCAACA+AGG 0.553249 tig0021212:-75161 None:intergenic
CAACCAAGAATAACCATACA+AGG 0.554993 tig0021212:-76453 None:intergenic
AAATAGAGCCTAAGTCAACT+AGG 0.555311 tig0021212:-76871 None:intergenic
CTTATAAGCAAGTACCAGAA+TGG 0.556871 tig0021212:+75656 Msa1389100:CDS
TGTGCAATAATGTCATATCC+AGG 0.560478 tig0021212:-75972 None:intergenic
TAGGTTTGGAGTATACCAAA+AGG 0.561650 tig0021212:+76929 Msa1389100:three_prime_UTR
TGCTTCCAAATAATAAAATG+AGG 0.567240 tig0021212:-75684 None:intergenic
GGATGTGCAACTTCCATGGT+GGG 0.570574 tig0021212:+75744 Msa1389100:CDS
GAGACAGAGTAAATCAGCAA+TGG 0.571794 tig0021212:+75594 Msa1389100:CDS
ATGGATGGGCTGGGATTCTG+AGG 0.572003 tig0021212:+73965 Msa1389100:CDS
GCAGTTGGGCAAGTAGCCAA+CGG 0.572167 tig0021212:-76802 None:intergenic
AGGCCATACTCTCAAATGGT+GGG 0.572786 tig0021212:+76759 Msa1389100:CDS
TGGAGTGGTGAACCTTTCAG+TGG 0.573103 tig0021212:+76267 Msa1389100:CDS
TCCTTCATATTAAACGGACC+AGG 0.573981 tig0021212:-73037 None:intergenic
CATGAACGGAAAGTCATGAC+TGG 0.574907 tig0021212:-72830 None:intergenic
CTTGCAAGAAAGAGAGTGCA+TGG 0.576649 tig0021212:-76073 None:intergenic
GGAAGTCCATGGTGCAACAA+GGG 0.576753 tig0021212:-75160 None:intergenic
TGAATTTCCAAATAGCTGGT+GGG 0.577855 tig0021212:+76232 Msa1389100:intron
ATTGCAAGCTGGCTATTGAC+CGG 0.579049 tig0021212:+76604 Msa1389100:CDS
TAAGACGGTGAAAAGATAGC+CGG 0.580107 tig0021212:-75004 None:intergenic
GAATGGAGTTAGTACCTGGT+TGG 0.581377 tig0021212:-75833 None:intergenic
TGATCGGGTATCTCCTTCCT+GGG 0.581852 tig0021212:+76000 Msa1389100:CDS
TGCTGTATACATGCATCGCG+GGG 0.582828 tig0021212:-76126 None:intergenic
CTGTATTTGGGACAAGTCCA+AGG 0.583762 tig0021212:-76352 None:intergenic
TCCAACCCCAACATTAACAA+TGG 0.583982 tig0021212:-75181 None:intergenic
AACGTAAAAGTTGATGTGCA+TGG 0.586475 tig0021212:+75619 Msa1389100:CDS
CCAATAGACAATGCGAAGAG+AGG 0.587306 tig0021212:-75399 None:intergenic
TTTGATGCATCTGTTATATG+GGG 0.588349 tig0021212:+76382 Msa1389100:CDS
TGGAGTATACCAAAAGGTGA+AGG 0.589389 tig0021212:+76935 Msa1389100:three_prime_UTR
CAAGAAAGAGAGTGCATGGA+CGG 0.590038 tig0021212:-76069 None:intergenic
GTTGCTTGGATGACACCGAT+TGG 0.590305 tig0021212:-75808 None:intergenic
TGTGGTGTTTCTCAAGGTGG+TGG 0.591102 tig0021212:+73088 Msa1389100:CDS
ATGCACCAATTCCAAGTCCA+TGG 0.591178 tig0021212:-75095 None:intergenic
AAACTCTTTCGTGGGAAGAG+TGG 0.591371 tig0021212:-72984 None:intergenic
CTCCAACTAACATTGCAAGC+TGG 0.593648 tig0021212:+76593 Msa1389100:CDS
GAAATAATGCTACATGAGTG+AGG 0.594196 tig0021212:-75449 None:intergenic
GAGTTGCAGATATTGGGCTA+TGG 0.594376 tig0021212:+73946 Msa1389100:intron
TTCTACCCGTATGTTACTGG+AGG 0.594516 tig0021212:+75226 Msa1389100:CDS
CGGATGTGCAACTTCCATGG+TGG 0.594864 tig0021212:+75743 Msa1389100:CDS
GATTCTGAGGAGGTATCTGG+TGG 0.595497 tig0021212:+73978 Msa1389100:CDS
TAGCATAAAGGACATTTGCA+TGG 0.596796 tig0021212:+76306 Msa1389100:CDS
CTCTTTCGTGGGAAGAGTGG+CGG 0.596961 tig0021212:-72981 None:intergenic
AATTGGACATCTGTCGTCTG+GGG 0.597748 tig0021212:-72762 None:intergenic
ATTCATCGTCTTAACCACTC+AGG 0.598386 tig0021212:+73186 Msa1389100:CDS
GACTGGAATAGAAGGGTCGT+CGG 0.598556 tig0021212:-72813 None:intergenic
CAAATTGGATCAGGTTACCA+TGG 0.599410 tig0021212:+75078 Msa1389100:CDS
GGCCATACTCTCAAATGGTG+GGG 0.599445 tig0021212:+76760 Msa1389100:CDS
AACTGTGGTGTTTCTCAAGG+TGG 0.609520 tig0021212:+73085 Msa1389100:CDS
CCATGAGAAGAATGTTAAGA+CGG 0.610563 tig0021212:-75019 None:intergenic
GAAGTCCATGGTGCAACAAG+GGG 0.611896 tig0021212:-75159 None:intergenic
CATCCAAGCAACTACCAACC+AGG 0.613390 tig0021212:+75819 Msa1389100:CDS
TGAATTGGACCATTGCCCGT+TGG 0.615015 tig0021212:+76786 Msa1389100:CDS
ACATCCACCAAGCCACTGAA+AGG 0.615061 tig0021212:-76279 None:intergenic
GGAGTATACCAAAAGGTGAA+GGG 0.617937 tig0021212:+76936 Msa1389100:three_prime_UTR
AAACGGATGTGCAACTTCCA+TGG 0.618006 tig0021212:+75740 Msa1389100:CDS
TGGTGGACCCTGTTGAAATG+TGG 0.620171 tig0021212:+73995 Msa1389100:CDS
ACATTAACAATGGAAGTCCA+TGG 0.620631 tig0021212:-75171 None:intergenic
GCGATGCATGTATACAGCAC+AGG 0.620769 tig0021212:+76130 Msa1389100:CDS
GCAGATATTGGGCTATGGAT+GGG 0.622626 tig0021212:+73951 Msa1389100:intron
ATTGGACATCTGTCGTCTGG+GGG 0.624277 tig0021212:-72761 None:intergenic
GCAAAGAGCATGCCCCACCA+TGG 0.624881 tig0021212:-75757 None:intergenic
AAATAATGCTACATGAGTGA+GGG 0.627674 tig0021212:-75448 None:intergenic
CAGGCCATACTCTCAAATGG+TGG 0.629647 tig0021212:+76758 Msa1389100:CDS
ATACAAGAAGCTAACGCCCA+TGG 0.630377 tig0021212:-74971 None:intergenic
TGGACCCTGTTGAAATGTGG+TGG 0.631265 tig0021212:+73998 Msa1389100:CDS
AAGTCATGACTGGAATAGAA+GGG 0.641825 tig0021212:-72820 None:intergenic
ATAACTGGTATGTTTATCAG+AGG 0.641908 tig0021212:-76538 None:intergenic
GGGAACACTAGTTGCTGGAG+TGG 0.642198 tig0021212:+76252 Msa1389100:CDS
GATGGGCTGGGATTCTGAGG+AGG 0.642204 tig0021212:+73968 Msa1389100:CDS
TGTTCCGCTTCCACAAACGT+TGG 0.644974 tig0021212:+76647 Msa1389100:CDS
AGCTAACGCCCATGGCAATG+AGG 0.647346 tig0021212:-74963 None:intergenic
GACAAGTCCAAGGACTGTCA+TGG 0.647797 tig0021212:-76342 None:intergenic
TTCACAATGCGTCCTCTCAG+CGG 0.649085 tig0021212:-72533 None:intergenic
ATGTTAGTTGGAGTTGCAGG+TGG 0.652154 tig0021212:-76583 None:intergenic
TTAAGACGATGAATAGAGCA+AGG 0.653502 tig0021212:-73177 None:intergenic
AGGTTTCGGTACAATCCACC+TGG 0.653741 tig0021212:-76433 None:intergenic
CTTCTTGCTTGTTATCACGG+AGG 0.654060 tig0021212:+76997 Msa1389100:three_prime_UTR
ATAAGCAAGTACCAGAATGG+TGG 0.668486 tig0021212:+75659 Msa1389100:CDS
CACGACAAAGATCTTAACCA+AGG 0.669431 tig0021212:+75323 Msa1389100:CDS
TTAAACCTCCAGTAACATAC+GGG 0.670866 tig0021212:-75231 None:intergenic
GATGTGCAACTTCCATGGTG+GGG 0.672934 tig0021212:+75745 Msa1389100:CDS
ATATAATTATGTTCTATCCG+CGG 0.673884 tig0021212:+76678 Msa1389100:CDS
TAAAGAGAGAGACTTGTGCA+AGG 0.675007 tig0021212:-74029 None:intergenic
TGTGCTGTATACATGCATCG+CGG 0.677093 tig0021212:-76128 None:intergenic
ACAATGCGAAGAGAGGACTA+AGG 0.678835 tig0021212:-75392 None:intergenic
TAATTCCCAGAAACCATGAA+CGG 0.680108 tig0021212:-72844 None:intergenic
GGGGTTTGATCGGACCGAAG+CGG 0.684425 tig0021212:+76401 Msa1389100:CDS
TATAAACAAACACCGCTGAG+AGG 0.685076 tig0021212:+72521 None:intergenic
AAGCGGCTATTCGGACCAGG+TGG 0.693998 tig0021212:+76418 Msa1389100:CDS
AGACGGTGAAAAGATAGCCG+GGG 0.701353 tig0021212:-75002 None:intergenic
ATGGCCACCACATTTCAACA+GGG 0.710481 tig0021212:-74002 None:intergenic
AAGTCCATGGTGCAACAAGG+GGG 0.711094 tig0021212:-75158 None:intergenic
GCTGTATACATGCATCGCGG+GGG 0.718081 tig0021212:-76125 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCTTTAATTCTATT+TGG + tig0021212:73212-73231 Msa1389100:intron 10.0%
!!! TTTATTATCTTTTAATTTAG+AGG + tig0021212:73258-73277 Msa1389100:intron 10.0%
!!! ATATCAATATTATTTGATTT+TGG - tig0021212:73517-73536 None:intergenic 10.0%
!! TATAATAAACAAGTAAATCA+AGG - tig0021212:73349-73368 None:intergenic 15.0%
!! AATTAATGGTTATTAAATGA+TGG + tig0021212:73619-73638 Msa1389100:intron 15.0%
!!! TATTCATTCATTTTGTAAAT+TGG - tig0021212:74319-74338 None:intergenic 15.0%
!! AAGAAATAAGTTTATTCTAA+AGG - tig0021212:75499-75518 None:intergenic 15.0%
!!! TTTTTTTGGTCAAAGATTTT+TGG + tig0021212:73302-73321 Msa1389100:intron 20.0%
!! AATAAAATAATTCTCACGAT+TGG - tig0021212:73392-73411 None:intergenic 20.0%
!! GACTTATATAATAGATTCAT+AGG - tig0021212:73566-73585 None:intergenic 20.0%
!! CTAATCGTGAATATAATTAA+TGG + tig0021212:73605-73624 Msa1389100:intron 20.0%
!!! GTTCTATTGTTTTTTTGTTT+TGG + tig0021212:73778-73797 Msa1389100:intron 20.0%
!!! AAGATGAGTTGAATTTAATT+TGG + tig0021212:73821-73840 Msa1389100:intron 20.0%
!! CAATTGAATAAAACGTAATA+TGG - tig0021212:74079-74098 None:intergenic 20.0%
!!! CATATTACGTTTTATTCAAT+TGG + tig0021212:74077-74096 Msa1389100:intron 20.0%
!! ATAAATATTAGTAAGATGAG+TGG - tig0021212:74282-74301 None:intergenic 20.0%
!!! TCTCTTATTTATAAACTCAA+GGG + tig0021212:74404-74423 Msa1389100:intron 20.0%
!! AAAATCAAAAAGAACTTGTA+TGG + tig0021212:74446-74465 Msa1389100:intron 20.0%
!! CATATTTACAACTTTCAATT+TGG - tig0021212:74594-74613 None:intergenic 20.0%
!! AATATTCTCTAATGTTTCTT+TGG + tig0021212:74726-74745 Msa1389100:intron 20.0%
!!! ATGATTTATTCTCTTTTTCA+TGG - tig0021212:74915-74934 None:intergenic 20.0%
!! AAAGAGAATAAATCATCAAA+AGG + tig0021212:74919-74938 Msa1389100:CDS 20.0%
!! TCTTATACATGTATTAACTA+AGG + tig0021212:75515-75534 Msa1389100:intron 20.0%
!!! AAAAGAAAAGTGTAGATTAT+AGG - tig0021212:75872-75891 None:intergenic 20.0%
!! TAACAAGCAAGAAAAAAAAA+AGG - tig0021212:76198-76217 None:intergenic 20.0%
!!! TTTTACTTGTTTTTGCTTTT+AGG + tig0021212:76893-76912 Msa1389100:three_prime_UTR 20.0%
!!! TTTACTTGTTTTTGCTTTTA+GGG + tig0021212:76894-76913 Msa1389100:three_prime_UTR 20.0%
!! ACTGAATATATCCATAAATA+AGG - tig0021212:77050-77069 None:intergenic 20.0%
!! TATATTCAGTTAACTGATAA+TGG + tig0021212:77060-77079 Msa1389100:three_prime_UTR 20.0%
!!! TTTTAGGAATTGAAAATTCA+TGG + tig0021212:77108-77127 Msa1389100:three_prime_UTR 20.0%
!!! AATTGAAAATTCATGGTTTT+TGG + tig0021212:77115-77134 Msa1389100:three_prime_UTR 20.0%
! AAAAAGTTAAACTCTTTCGT+GGG - tig0021212:72995-73014 None:intergenic 25.0%
! AAAAAAGTTAAACTCTTTCG+TGG - tig0021212:72996-73015 None:intergenic 25.0%
!!! ACGAAAGAGTTTAACTTTTT+TGG + tig0021212:72995-73014 Msa1389100:CDS 25.0%
!!! CGAAAGAGTTTAACTTTTTT+GGG + tig0021212:72996-73015 Msa1389100:CDS 25.0%
!!! TTAGTGCAAAGTAGTTTTTT+TGG + tig0021212:73288-73307 Msa1389100:intron 25.0%
!! GTTCAGTGTTGAAAAAAATT+TGG + tig0021212:73712-73731 Msa1389100:intron 25.0%
!! TAAATTGAGTTGCAGATATT+GGG + tig0021212:73940-73959 Msa1389100:intron 25.0%
! AAACGTAATATGGAAGAAAA+GGG - tig0021212:74069-74088 None:intergenic 25.0%
! AAAACGTAATATGGAAGAAA+AGG - tig0021212:74070-74089 None:intergenic 25.0%
! TATTTACTTCAATAACCCTT+TGG + tig0021212:74108-74127 Msa1389100:intron 25.0%
!!! TACTTTTAGAAATCACCAAA+GGG - tig0021212:74126-74145 None:intergenic 25.0%
!!! TTACTTTTAGAAATCACCAA+AGG - tig0021212:74127-74146 None:intergenic 25.0%
! TTCAATATGAAATGAAGTGT+CGG + tig0021212:74254-74273 Msa1389100:intron 25.0%
! GTAAATTGGCTAATGAATAT+TGG - tig0021212:74305-74324 None:intergenic 25.0%
!! CTCTCTTATTTATAAACTCA+AGG + tig0021212:74403-74422 Msa1389100:intron 25.0%
! ATGCTATAGAAAAAAACACT+TGG + tig0021212:74537-74556 Msa1389100:intron 25.0%
! CAACTTTCAATTTGGTATAA+TGG - tig0021212:74586-74605 None:intergenic 25.0%
! CTGTATAATTGACAACAAAT+AGG + tig0021212:74749-74768 Msa1389100:intron 25.0%
!! ACAGTGAAAACTAATTTTCT+TGG + tig0021212:74806-74825 Msa1389100:intron 25.0%
!! AAAACTAATTTTCTTGGTCA+AGG + tig0021212:74812-74831 Msa1389100:intron 25.0%
! AACAACTGATTAGAGAATAT+AGG - tig0021212:75279-75298 None:intergenic 25.0%
! AATGTTAAGATCATATTCCT+TGG - tig0021212:75343-75362 None:intergenic 25.0%
!! TGGTTCCTCATTTTATTATT+TGG + tig0021212:75679-75698 Msa1389100:CDS 25.0%
! TGCTTCCAAATAATAAAATG+AGG - tig0021212:75687-75706 None:intergenic 25.0%
!! CATTTTATTATTTGGAAGCA+TGG + tig0021212:75687-75706 Msa1389100:CDS 25.0%
!!! AACTTGCTCTTTAAGATTTA+TGG + tig0021212:76035-76054 Msa1389100:CDS 25.0%
!!! ACTTGCTCTTTAAGATTTAT+GGG + tig0021212:76036-76055 Msa1389100:CDS 25.0%
! ATAACAAAAGAGTCTAAACT+AGG - tig0021212:76175-76194 None:intergenic 25.0%
!! ATTTTGAATTTCCAAATAGC+TGG + tig0021212:76228-76247 Msa1389100:intron 25.0%
! ATTTGATGCATCTGTTATAT+GGG + tig0021212:76381-76400 Msa1389100:CDS 25.0%
! AAATCTACCCTAATAAGAAA+TGG + tig0021212:76512-76531 Msa1389100:CDS 25.0%
! AACATACCAGTTATATCTTA+TGG + tig0021212:76547-76566 Msa1389100:CDS 25.0%
! ATATAATTATGTTCTATCCG+CGG + tig0021212:76678-76697 Msa1389100:CDS 25.0%
!!! TTACTTGTTTTTGCTTTTAG+GGG + tig0021212:76895-76914 Msa1389100:three_prime_UTR 25.0%
! CATAATAATTGCTAAGCAAT+TGG - tig0021212:76971-76990 None:intergenic 25.0%
!!! TTTTTTACCTGCCTTATTTA+TGG + tig0021212:77036-77055 Msa1389100:three_prime_UTR 25.0%
! AATATATCCATAAATAAGGC+AGG - tig0021212:77046-77065 None:intergenic 25.0%
TTCTCTTCTCTTATCTTCAA+TGG + tig0021212:72691-72710 Msa1389100:exon 30.0%
TTGCATAAGAATAGCAGAAA+TGG - tig0021212:72930-72949 None:intergenic 30.0%
TCTTCCAATTGGAAAATTCA+TGG + tig0021212:72958-72977 Msa1389100:CDS 30.0%
!!! AAGAGTTTAACTTTTTTGGG+TGG + tig0021212:72999-73018 Msa1389100:CDS 30.0%
ACATGCTCCTTCATATTAAA+CGG - tig0021212:73046-73065 None:intergenic 30.0%
!!! ATCACTATTTTTGCTAACTG+TGG + tig0021212:73070-73089 Msa1389100:CDS 30.0%
CATAATAGTAATAGCACCAA+TGG - tig0021212:73125-73144 None:intergenic 30.0%
AAAGAAAAAAAGAACCTGAG+TGG - tig0021212:73203-73222 None:intergenic 30.0%
GATGCAGAATATATAATTGC+AGG + tig0021212:73465-73484 Msa1389100:intron 30.0%
! GTAAATTGAGTTGCAGATAT+TGG + tig0021212:73939-73958 Msa1389100:intron 30.0%
AACGTAATATGGAAGAAAAG+GGG - tig0021212:74068-74087 None:intergenic 30.0%
TAGTCAATCACAAACTTGAT+TGG - tig0021212:74498-74517 None:intergenic 30.0%
TGAAAGTTGTAAATATGTCG+TGG + tig0021212:74597-74616 Msa1389100:intron 30.0%
TAATTGACAACAAATAGGCA+AGG + tig0021212:74754-74773 Msa1389100:intron 30.0%
AATCATCAAAAGGCTTTACA+AGG + tig0021212:74929-74948 Msa1389100:CDS 30.0%
AATATCACAGCACAACAAAT+TGG + tig0021212:75063-75082 Msa1389100:CDS 30.0%
ATTGATGCATACAACAAGTA+TGG + tig0021212:75360-75379 Msa1389100:CDS 30.0%
! ATCAGGTTTTGCAAGATTTA+CGG + tig0021212:75422-75441 Msa1389100:CDS 30.0%
AAATAATGCTACATGAGTGA+GGG - tig0021212:75451-75470 None:intergenic 30.0%
ACTCATGTAGCATTATTTCA+TGG + tig0021212:75453-75472 Msa1389100:CDS 30.0%
! CTTTAGTAATGGCTTTTGTT+TGG + tig0021212:75716-75735 Msa1389100:CDS 30.0%
!! AATGGCTTTTGTTTGGAAAA+CGG + tig0021212:75723-75742 Msa1389100:CDS 30.0%
! AGAAAAGTGTAGATTATAGG+TGG - tig0021212:75869-75888 None:intergenic 30.0%
ATTATTGCACAGTTCATGAT+CGG + tig0021212:75984-76003 Msa1389100:CDS 30.0%
TTAAAGAGCAAGTTTGCAAT+TGG - tig0021212:76029-76048 None:intergenic 30.0%
TCAAATGTCACTCTGTATTT+GGG - tig0021212:76367-76386 None:intergenic 30.0%
ATCAAATGTCACTCTGTATT+TGG - tig0021212:76368-76387 None:intergenic 30.0%
CATTTGATGCATCTGTTATA+TGG + tig0021212:76380-76399 Msa1389100:CDS 30.0%
TTTGATGCATCTGTTATATG+GGG + tig0021212:76382-76401 Msa1389100:CDS 30.0%
AGAATAACCATACAAGGTTT+CGG - tig0021212:76450-76469 None:intergenic 30.0%
AAACCTTGTATGGTTATTCT+TGG + tig0021212:76450-76469 Msa1389100:CDS 30.0%
GAGGAATCCATTTCTTATTA+GGG - tig0021212:76522-76541 None:intergenic 30.0%
AGAGGAATCCATTTCTTATT+AGG - tig0021212:76523-76542 None:intergenic 30.0%
ATAACTGGTATGTTTATCAG+AGG - tig0021212:76541-76560 None:intergenic 30.0%
GCAAAACCATAAGATATAAC+TGG - tig0021212:76556-76575 None:intergenic 30.0%
!! GTTATATCTTATGGTTTTGC+TGG + tig0021212:76556-76575 Msa1389100:CDS 30.0%
AAAGTAGTTGAAGATCATTC+CGG - tig0021212:76626-76645 None:intergenic 30.0%
GCAGGTAAAAAAAGACAAAA+AGG - tig0021212:77028-77047 None:intergenic 30.0%
!! TGACGTCTGAAATACATTTT+AGG + tig0021212:77092-77111 Msa1389100:three_prime_UTR 30.0%
!!! AATTCATGGTTTTTGGTAGT+TGG + tig0021212:77122-77141 Msa1389100:three_prime_UTR 30.0%
TTCTTGTTCTGTCAAATGAC+AGG - tig0021212:72584-72603 None:intergenic 35.0%
AAGTCATGACTGGAATAGAA+GGG - tig0021212:72823-72842 None:intergenic 35.0%
AAAGTCATGACTGGAATAGA+AGG - tig0021212:72824-72843 None:intergenic 35.0%
TAATTCCCAGAAACCATGAA+CGG - tig0021212:72847-72866 None:intergenic 35.0%
AGAATAGCAGAAATGGTTAG+TGG - tig0021212:72923-72942 None:intergenic 35.0%
TTAAGACGATGAATAGAGCA+AGG - tig0021212:73180-73199 None:intergenic 35.0%
!! TGGTCAAAGATTTTTGGACA+AGG + tig0021212:73308-73327 Msa1389100:intron 35.0%
TGCAGGCAATTGTTTATGTT+TGG + tig0021212:73482-73501 Msa1389100:intron 35.0%
GCAGGCAATTGTTTATGTTT+GGG + tig0021212:73483-73502 Msa1389100:intron 35.0%
TTGTTATCTGCAAGTCTATC+TGG + tig0021212:73750-73769 Msa1389100:intron 35.0%
ACGTATTAGTGTCTTTGTGT+TGG - tig0021212:74153-74172 None:intergenic 35.0%
AACACAAAGACACTAATACG+TGG + tig0021212:74152-74171 Msa1389100:intron 35.0%
AACCACACATTTCATTGTCT+TGG + tig0021212:74215-74234 Msa1389100:intron 35.0%
AACACTTGGTTTAACCTTAG+TGG + tig0021212:74551-74570 Msa1389100:intron 35.0%
ACACTTGGTTTAACCTTAGT+GGG + tig0021212:74552-74571 Msa1389100:intron 35.0%
! ATATCACAAGCTGTGTTGTT+CGG + tig0021212:74650-74669 Msa1389100:intron 35.0%
! CACTGTTGCATAAGTTCTTT+TGG - tig0021212:74792-74811 None:intergenic 35.0%
CCATGAGAAGAATGTTAAGA+CGG - tig0021212:75022-75041 None:intergenic 35.0%
TGTTGTGCTGTGATATTATG+TGG - tig0021212:75060-75079 None:intergenic 35.0%
ACATTAACAATGGAAGTCCA+TGG - tig0021212:75174-75193 None:intergenic 35.0%
TGGACTTCCATTGTTAATGT+TGG + tig0021212:75174-75193 Msa1389100:CDS 35.0%
GGACTTCCATTGTTAATGTT+GGG + tig0021212:75175-75194 Msa1389100:CDS 35.0%
GACTTCCATTGTTAATGTTG+GGG + tig0021212:75176-75195 Msa1389100:CDS 35.0%
TAATTCTACCCGTATGTTAC+TGG + tig0021212:75223-75242 Msa1389100:CDS 35.0%
TTAAACCTCCAGTAACATAC+GGG - tig0021212:75234-75253 None:intergenic 35.0%
GTTAAACCTCCAGTAACATA+CGG - tig0021212:75235-75254 None:intergenic 35.0%
! GGTTTAACACTTTTGATGCT+AGG + tig0021212:75247-75266 Msa1389100:CDS 35.0%
GAAATAATGCTACATGAGTG+AGG - tig0021212:75452-75471 None:intergenic 35.0%
ATGTAGCATTATTTCATGGC+AGG + tig0021212:75457-75476 Msa1389100:CDS 35.0%
CTCAATATGTCTCTGCATAA+AGG - tig0021212:75577-75596 None:intergenic 35.0%
AGACAGAGTAAATCAGCAAT+GGG + tig0021212:75595-75614 Msa1389100:CDS 35.0%
!! AACGTAAAAGTTGATGTGCA+TGG + tig0021212:75619-75638 Msa1389100:CDS 35.0%
CTTATAAGCAAGTACCAGAA+TGG + tig0021212:75656-75675 Msa1389100:CDS 35.0%
! TTTGTTGTAACTCTCCCAAT+CGG + tig0021212:75793-75812 Msa1389100:CDS 35.0%
TATTGAATGGAGTTAGTACC+TGG - tig0021212:75840-75859 None:intergenic 35.0%
TAGGTGGCAGAAATATTGAA+TGG - tig0021212:75853-75872 None:intergenic 35.0%
AACATGAGTGTTTCCTATGA+TGG + tig0021212:75935-75954 Msa1389100:intron 35.0%
TGTGCAATAATGTCATATCC+AGG - tig0021212:75975-75994 None:intergenic 35.0%
TTATTGCACAGTTCATGATC+GGG + tig0021212:75985-76004 Msa1389100:CDS 35.0%
TTCTTGCAAGATCTCAAACT+TGG + tig0021212:76086-76105 Msa1389100:CDS 35.0%
TCTTGCAAGATCTCAAACTT+GGG + tig0021212:76087-76106 Msa1389100:CDS 35.0%
TTGAATTTCCAAATAGCTGG+TGG + tig0021212:76231-76250 Msa1389100:intron 35.0%
TGAATTTCCAAATAGCTGGT+GGG + tig0021212:76232-76251 Msa1389100:intron 35.0%
TAGCATAAAGGACATTTGCA+TGG + tig0021212:76306-76325 Msa1389100:CDS 35.0%
TCTGTTATATGGGGTTTGAT+CGG + tig0021212:76391-76410 Msa1389100:CDS 35.0%
CAACCAAGAATAACCATACA+AGG - tig0021212:76456-76475 None:intergenic 35.0%
CTTGTATGGTTATTCTTGGT+TGG + tig0021212:76454-76473 Msa1389100:CDS 35.0%
! ATTTTGCTAAACACCCAAAC+AGG - tig0021212:76496-76515 None:intergenic 35.0%
GGCTTTCTCTATTAGAATAC+AGG - tig0021212:76853-76872 None:intergenic 35.0%
AAATAGAGCCTAAGTCAACT+AGG - tig0021212:76874-76893 None:intergenic 35.0%
! TAGGTTTGGAGTATACCAAA+AGG + tig0021212:76929-76948 Msa1389100:three_prime_UTR 35.0%
! TATTTAGTCCCTTCACCTTT+TGG - tig0021212:76947-76966 None:intergenic 35.0%
!! ATGCTTCTTGCTTGTTATCA+CGG + tig0021212:76994-77013 Msa1389100:three_prime_UTR 35.0%
! TGTCAAATGACAGGTTGGAA+TGG - tig0021212:72575-72594 None:intergenic 40.0%
TGTTCTGTCAAATGACAGGT+TGG - tig0021212:72580-72599 None:intergenic 40.0%
!!! TTTGCTGCTTTTTCAGTGTC+TGG - tig0021212:72734-72753 None:intergenic 40.0%
GACACTGAAAAAGCAGCAAA+CGG + tig0021212:72734-72753 Msa1389100:CDS 40.0%
ACGAGAGCTACTTCTTCAAT+TGG - tig0021212:72782-72801 None:intergenic 40.0%
ACTTTCCGTTCATGGTTTCT+GGG + tig0021212:72839-72858 Msa1389100:CDS 40.0%
CAAATCGCTGTTCTTCCAAT+TGG + tig0021212:72947-72966 Msa1389100:CDS 40.0%
TCCTGGTCCGTTTAATATGA+AGG + tig0021212:73036-73055 Msa1389100:CDS 40.0%
TCCTTCATATTAAACGGACC+AGG - tig0021212:73040-73059 None:intergenic 40.0%
ATTCATCGTCTTAACCACTC+AGG + tig0021212:73186-73205 Msa1389100:CDS 40.0%
!! TGGTTGATGACGAAAAAGTG+TGG + tig0021212:73798-73817 Msa1389100:intron 40.0%
TAAAGAGAGAGACTTGTGCA+AGG - tig0021212:74032-74051 None:intergenic 40.0%
TTGCACAAGTCTCTCTCTTT+AGG + tig0021212:74031-74050 Msa1389100:CDS 40.0%
CACCAAGACAATGAAATGTG+TGG - tig0021212:74220-74239 None:intergenic 40.0%
! CAGTTTTTCCTCATTGCCAT+GGG + tig0021212:74955-74974 Msa1389100:CDS 40.0%
TTCTTGTATTATGCACTCCC+CGG + tig0021212:74985-75004 Msa1389100:CDS 40.0%
TAAGACGGTGAAAAGATAGC+CGG - tig0021212:75007-75026 None:intergenic 40.0%
CCGTCTTAACATTCTTCTCA+TGG + tig0021212:75019-75038 Msa1389100:CDS 40.0%
ACAGCACAACAAATTGGATC+AGG + tig0021212:75069-75088 Msa1389100:CDS 40.0%
CAAATTGGATCAGGTTACCA+TGG + tig0021212:75078-75097 Msa1389100:CDS 40.0%
TTGGTGCATTCACACTTGAT+TGG + tig0021212:75109-75128 Msa1389100:CDS 40.0%
TGGTGCATTCACACTTGATT+GGG + tig0021212:75110-75129 Msa1389100:CDS 40.0%
GCTGGAATTTCAGCTTATCA+TGG + tig0021212:75132-75151 Msa1389100:CDS 40.0%
TCCATTGTTAATGTTGGGGT+TGG + tig0021212:75180-75199 Msa1389100:CDS 40.0%
TCCAACCCCAACATTAACAA+TGG - tig0021212:75184-75203 None:intergenic 40.0%
AATCAGTTGTTCACGTCAAG+TGG + tig0021212:75288-75307 Msa1389100:CDS 40.0%
CACGACAAAGATCTTAACCA+AGG + tig0021212:75323-75342 Msa1389100:CDS 40.0%
TTCGCATTGTCTATTGGATC+AGG + tig0021212:75405-75424 Msa1389100:CDS 40.0%
AGCATTATTTCATGGCAGGT+AGG + tig0021212:75461-75480 Msa1389100:intron 40.0%
GAGACAGAGTAAATCAGCAA+TGG + tig0021212:75594-75613 Msa1389100:CDS 40.0%
ATAAGCAAGTACCAGAATGG+TGG + tig0021212:75659-75678 Msa1389100:CDS 40.0%
AAAATGAGGAACCACCATTC+TGG - tig0021212:75673-75692 None:intergenic 40.0%
CATGGCGCTATCTTTAGTAA+TGG + tig0021212:75705-75724 Msa1389100:CDS 40.0%
! TCTTTTGCTCGTAAGCAATG+AGG + tig0021212:75886-75905 Msa1389100:intron 40.0%
! AAGTTTGCAATTGGTTTCCC+AGG - tig0021212:76020-76039 None:intergenic 40.0%
GTGGATGTTGGATAGCATAA+AGG + tig0021212:76294-76313 Msa1389100:CDS 40.0%
GATTGTACCGAAACCTTGTA+TGG + tig0021212:76440-76459 Msa1389100:CDS 40.0%
! AGAGAAAGCCTAGTTGACTT+AGG + tig0021212:76863-76882 Msa1389100:three_prime_UTR 40.0%
!! TGTTTTTGCTTTTAGGGGTG+TGG + tig0021212:76900-76919 Msa1389100:three_prime_UTR 40.0%
TGGTATACTCCAAACCTAAC+TGG - tig0021212:76927-76946 None:intergenic 40.0%
TGGAGTATACCAAAAGGTGA+AGG + tig0021212:76935-76954 Msa1389100:three_prime_UTR 40.0%
GGAGTATACCAAAAGGTGAA+GGG + tig0021212:76936-76955 Msa1389100:three_prime_UTR 40.0%
!!! TGGTTTTTGGTAGTTGGTAC+AGG + tig0021212:77128-77147 Msa1389100:three_prime_UTR 40.0%
! GTGTCTGGAGTTGGATTCTT+TGG - tig0021212:72719-72738 None:intergenic 45.0%
!!! GCTTTTTCAGTGTCTGGAGT+TGG - tig0021212:72728-72747 None:intergenic 45.0%
AATTGGACATCTGTCGTCTG+GGG - tig0021212:72765-72784 None:intergenic 45.0%
CAATTGGACATCTGTCGTCT+GGG - tig0021212:72766-72785 None:intergenic 45.0%
TCAATTGGACATCTGTCGTC+TGG - tig0021212:72767-72786 None:intergenic 45.0%
CATGAACGGAAAGTCATGAC+TGG - tig0021212:72833-72852 None:intergenic 45.0%
CAGTCATGACTTTCCGTTCA+TGG + tig0021212:72831-72850 Msa1389100:CDS 45.0%
GACTTTCCGTTCATGGTTTC+TGG + tig0021212:72838-72857 Msa1389100:CDS 45.0%
! GCGGCCATGAATTTTCCAAT+TGG - tig0021212:72965-72984 None:intergenic 45.0%
AAACTCTTTCGTGGGAAGAG+TGG - tig0021212:72987-73006 None:intergenic 45.0%
GCTAACTGTGGTGTTTCTCA+AGG + tig0021212:73082-73101 Msa1389100:CDS 45.0%
AACTGTGGTGTTTCTCAAGG+TGG + tig0021212:73085-73104 Msa1389100:CDS 45.0%
!! TTTGTCTTTGAGACCCGTGA+AGG + tig0021212:73650-73669 Msa1389100:intron 45.0%
GAGTTGCAGATATTGGGCTA+TGG + tig0021212:73946-73965 Msa1389100:intron 45.0%
TGCAGATATTGGGCTATGGA+TGG + tig0021212:73950-73969 Msa1389100:intron 45.0%
GCAGATATTGGGCTATGGAT+GGG + tig0021212:73951-73970 Msa1389100:intron 45.0%
ATGGCCACCACATTTCAACA+GGG - tig0021212:74005-74024 None:intergenic 45.0%
GAGACTTGTGCAAGGTTTGA+TGG - tig0021212:74024-74043 None:intergenic 45.0%
AGCGCATCTTCACTACTGAA+AGG + tig0021212:74624-74643 Msa1389100:intron 45.0%
! ATGGAGTGCTCTGTAGCATA+AGG - tig0021212:74896-74915 None:intergenic 45.0%
! GCAGTTTTTCCTCATTGCCA+TGG + tig0021212:74954-74973 Msa1389100:CDS 45.0%
ATACAAGAAGCTAACGCCCA+TGG - tig0021212:74974-74993 None:intergenic 45.0%
AAGACGGTGAAAAGATAGCC+GGG - tig0021212:75006-75025 None:intergenic 45.0%
!! TCTCATGGATTTGCTACGCA+TGG + tig0021212:75034-75053 Msa1389100:CDS 45.0%
GGTTACCATGGACTTGGAAT+TGG + tig0021212:75090-75109 Msa1389100:CDS 45.0%
ATGCACCAATTCCAAGTCCA+TGG - tig0021212:75098-75117 None:intergenic 45.0%
TTCTACCCGTATGTTACTGG+AGG + tig0021212:75226-75245 Msa1389100:CDS 45.0%
ACAATGCGAAGAGAGGACTA+AGG - tig0021212:75395-75414 None:intergenic 45.0%
CCAATAGACAATGCGAAGAG+AGG - tig0021212:75402-75421 None:intergenic 45.0%
CCTCTCTTCGCATTGTCTAT+TGG + tig0021212:75399-75418 Msa1389100:CDS 45.0%
AAACGGATGTGCAACTTCCA+TGG + tig0021212:75740-75759 Msa1389100:CDS 45.0%
! TTGCTTGGATGACACCGATT+GGG - tig0021212:75810-75829 None:intergenic 45.0%
GAATGGAGTTAGTACCTGGT+TGG - tig0021212:75836-75855 None:intergenic 45.0%
AGCAATGAGGCGAAAGCAAT+AGG + tig0021212:75899-75918 Msa1389100:intron 45.0%
TGCTGCAAGGTAACCATCAT+AGG - tig0021212:75951-75970 None:intergenic 45.0%
! TTGCAATTGGTTTCCCAGGA+AGG - tig0021212:76016-76035 None:intergenic 45.0%
! CAAGAAAGAGAGTGCATGGA+CGG - tig0021212:76072-76091 None:intergenic 45.0%
! CTTGCAAGAAAGAGAGTGCA+TGG - tig0021212:76076-76095 None:intergenic 45.0%
TGTGCTGTATACATGCATCG+CGG - tig0021212:76131-76150 None:intergenic 45.0%
TAGTGTTCCCACCAGCTATT+TGG - tig0021212:76242-76261 None:intergenic 45.0%
! CTGTATTTGGGACAAGTCCA+AGG - tig0021212:76355-76374 None:intergenic 45.0%
AGTGTTGCCAGTTCCTGTTT+GGG + tig0021212:76480-76499 Msa1389100:CDS 45.0%
CTAAACACCCAAACAGGAAC+TGG - tig0021212:76490-76509 None:intergenic 45.0%
ATGTTAGTTGGAGTTGCAGG+TGG - tig0021212:76586-76605 None:intergenic 45.0%
GCAATGTTAGTTGGAGTTGC+AGG - tig0021212:76589-76608 None:intergenic 45.0%
CTCCAACTAACATTGCAAGC+TGG + tig0021212:76593-76612 Msa1389100:CDS 45.0%
AGCCAGCTTGCAATGTTAGT+TGG - tig0021212:76598-76617 None:intergenic 45.0%
ATTGCAAGCTGGCTATTGAC+CGG + tig0021212:76604-76623 Msa1389100:CDS 45.0%
ATTTCTGCCACCAACGTTTG+TGG - tig0021212:76660-76679 None:intergenic 45.0%
TTCTTCGCTCTGCAAAATGC+AGG + tig0021212:76739-76758 Msa1389100:CDS 45.0%
ATGCAGGCCATACTCTCAAA+TGG + tig0021212:76755-76774 Msa1389100:CDS 45.0%
AGGCCATACTCTCAAATGGT+GGG + tig0021212:76759-76778 Msa1389100:CDS 45.0%
TTCCCCACCATTTGAGAGTA+TGG - tig0021212:76765-76784 None:intergenic 45.0%
! CAAATGGTGGGGAACTGAAT+TGG + tig0021212:76771-76790 Msa1389100:CDS 45.0%
CAACCATCAACCACAATTCC+TGG - tig0021212:76829-76848 None:intergenic 45.0%
!! CTTCTTGCTTGTTATCACGG+AGG + tig0021212:76997-77016 Msa1389100:three_prime_UTR 45.0%
TTCACAATGCGTCCTCTCAG+CGG - tig0021212:72536-72555 None:intergenic 50.0%
ATTGGACATCTGTCGTCTGG+GGG - tig0021212:72764-72783 None:intergenic 50.0%
!! TAGAAGGGTCGTCGGTTTCA+GGG - tig0021212:72808-72827 None:intergenic 50.0%
!! ATAGAAGGGTCGTCGGTTTC+AGG - tig0021212:72809-72828 None:intergenic 50.0%
GACTGGAATAGAAGGGTCGT+CGG - tig0021212:72816-72835 None:intergenic 50.0%
TGGCGTTTCACGTTGAATCC+TGG + tig0021212:73019-73038 Msa1389100:CDS 50.0%
TGTGGTGTTTCTCAAGGTGG+TGG + tig0021212:73088-73107 Msa1389100:CDS 50.0%
! GGTGGTGATGCTTACTCCAT+TGG + tig0021212:73106-73125 Msa1389100:CDS 50.0%
ACGACCACGTTCAACCTTCA+CGG - tig0021212:73667-73686 None:intergenic 50.0%
ATATTGGGCTATGGATGGGC+TGG + tig0021212:73955-73974 Msa1389100:CDS 50.0%
! TATTGGGCTATGGATGGGCT+GGG + tig0021212:73956-73975 Msa1389100:CDS 50.0%
!! TGGGATTCTGAGGAGGTATC+TGG + tig0021212:73975-73994 Msa1389100:CDS 50.0%
!! GATTCTGAGGAGGTATCTGG+TGG + tig0021212:73978-73997 Msa1389100:CDS 50.0%
! TGGTGGACCCTGTTGAAATG+TGG + tig0021212:73995-74014 Msa1389100:CDS 50.0%
TGGACCCTGTTGAAATGTGG+TGG + tig0021212:73998-74017 Msa1389100:CDS 50.0%
GATGGCCACCACATTTCAAC+AGG - tig0021212:74006-74025 None:intergenic 50.0%
AATGGCTGTTGTGCCCACTA+AGG - tig0021212:74568-74587 None:intergenic 50.0%
AGACGGTGAAAAGATAGCCG+GGG - tig0021212:75005-75024 None:intergenic 50.0%
GGATCAGGTTACCATGGACT+TGG + tig0021212:75084-75103 Msa1389100:CDS 50.0%
GCATTCACACTTGATTGGGC+TGG + tig0021212:75114-75133 Msa1389100:CDS 50.0%
AAGTCCATGGTGCAACAAGG+GGG - tig0021212:75161-75180 None:intergenic 50.0%
GAAGTCCATGGTGCAACAAG+GGG - tig0021212:75162-75181 None:intergenic 50.0%
GGAAGTCCATGGTGCAACAA+GGG - tig0021212:75163-75182 None:intergenic 50.0%
TGGAAGTCCATGGTGCAACA+AGG - tig0021212:75164-75183 None:intergenic 50.0%
GGATGTGCAACTTCCATGGT+GGG + tig0021212:75744-75763 Msa1389100:CDS 50.0%
GATGTGCAACTTCCATGGTG+GGG + tig0021212:75745-75764 Msa1389100:CDS 50.0%
! TGGGGCATGCTCTTTGCTTT+TGG + tig0021212:75763-75782 Msa1389100:CDS 50.0%
GTTGCTTGGATGACACCGAT+TGG - tig0021212:75811-75830 None:intergenic 50.0%
CATCCAAGCAACTACCAACC+AGG + tig0021212:75819-75838 Msa1389100:CDS 50.0%
!! GTACCTGGTTGGTAGTTGCT+TGG - tig0021212:75825-75844 None:intergenic 50.0%
ATGGTTACCTTGCAGCAACC+TGG + tig0021212:75954-75973 Msa1389100:intron 50.0%
GTCATATCCAGGTTGCTGCA+AGG - tig0021212:75964-75983 None:intergenic 50.0%
ATGATCGGGTATCTCCTTCC+TGG + tig0021212:75999-76018 Msa1389100:CDS 50.0%
TGATCGGGTATCTCCTTCCT+GGG + tig0021212:76000-76019 Msa1389100:CDS 50.0%
TGCTGTATACATGCATCGCG+GGG - tig0021212:76129-76148 None:intergenic 50.0%
GTGCTGTATACATGCATCGC+GGG - tig0021212:76130-76149 None:intergenic 50.0%
GCGATGCATGTATACAGCAC+AGG + tig0021212:76130-76149 Msa1389100:CDS 50.0%
TGGAGTGGTGAACCTTTCAG+TGG + tig0021212:76267-76286 Msa1389100:CDS 50.0%
TGGTGAACCTTTCAGTGGCT+TGG + tig0021212:76272-76291 Msa1389100:CDS 50.0%
! TGAACCTTTCAGTGGCTTGG+TGG + tig0021212:76275-76294 Msa1389100:CDS 50.0%
ACATCCACCAAGCCACTGAA+AGG - tig0021212:76282-76301 None:intergenic 50.0%
!! TTCAGTGGCTTGGTGGATGT+TGG + tig0021212:76282-76301 Msa1389100:CDS 50.0%
AAGCTCACCATGACAGTCCT+TGG + tig0021212:76335-76354 Msa1389100:CDS 50.0%
GACAAGTCCAAGGACTGTCA+TGG - tig0021212:76345-76364 None:intergenic 50.0%
AGGTTTCGGTACAATCCACC+TGG - tig0021212:76436-76455 None:intergenic 50.0%
CAGTGTTGCCAGTTCCTGTT+TGG + tig0021212:76479-76498 Msa1389100:CDS 50.0%
TGTTCCGCTTCCACAAACGT+TGG + tig0021212:76647-76666 Msa1389100:CDS 50.0%
! TGATGCAGGCACGGCTTTTA+TGG + tig0021212:76705-76724 Msa1389100:CDS 50.0%
! GATGCAGGCACGGCTTTTAT+GGG + tig0021212:76706-76725 Msa1389100:CDS 50.0%
CAGGCCATACTCTCAAATGG+TGG + tig0021212:76758-76777 Msa1389100:CDS 50.0%
GGCCATACTCTCAAATGGTG+GGG + tig0021212:76760-76779 Msa1389100:CDS 50.0%
TGAATTGGACCATTGCCCGT+TGG + tig0021212:76786-76805 Msa1389100:CDS 50.0%
CCACAATTCCTGGAGCAGTT+GGG - tig0021212:76819-76838 None:intergenic 50.0%
ACCACAATTCCTGGAGCAGT+TGG - tig0021212:76820-76839 None:intergenic 50.0%
GCTCCAGGAATTGTGGTTGA+TGG + tig0021212:76823-76842 Msa1389100:CDS 50.0%
! TTTAGGGGTGTGGACCAGTT+AGG + tig0021212:76910-76929 Msa1389100:three_prime_UTR 50.0%
CTCTTTCGTGGGAAGAGTGG+CGG - tig0021212:72984-73003 None:intergenic 55.0%
AGACCCGTGAAGGTTGAACG+TGG + tig0021212:73660-73679 Msa1389100:intron 55.0%
CGACCACGTTCAACCTTCAC+GGG - tig0021212:73666-73685 None:intergenic 55.0%
!! ATGGATGGGCTGGGATTCTG+AGG + tig0021212:73965-73984 Msa1389100:CDS 55.0%
AGCTAACGCCCATGGCAATG+AGG - tig0021212:74966-74985 None:intergenic 55.0%
CGGATGTGCAACTTCCATGG+TGG + tig0021212:75743-75762 Msa1389100:CDS 55.0%
GCTGTATACATGCATCGCGG+GGG - tig0021212:76128-76147 None:intergenic 55.0%
CTGGTGGGAACACTAGTTGC+TGG + tig0021212:76247-76266 Msa1389100:CDS 55.0%
GGGAACACTAGTTGCTGGAG+TGG + tig0021212:76252-76271 Msa1389100:CDS 55.0%
ATCGGACCGAAGCGGCTATT+CGG + tig0021212:76409-76428 Msa1389100:CDS 55.0%
TCCGCTTCCACAAACGTTGG+TGG + tig0021212:76650-76669 Msa1389100:CDS 55.0%
GCCACCAACGTTTGTGGAAG+CGG - tig0021212:76654-76673 None:intergenic 55.0%
CAGTTGGGCAAGTAGCCAAC+GGG - tig0021212:76804-76823 None:intergenic 55.0%
GCAGTTGGGCAAGTAGCCAA+CGG - tig0021212:76805-76824 None:intergenic 55.0%
CCCAACTGCTCCAGGAATTG+TGG + tig0021212:76816-76835 Msa1389100:CDS 55.0%
GGGTGTGGACCAGTTAGGTT+TGG + tig0021212:76915-76934 Msa1389100:three_prime_UTR 55.0%
!! GATGGGCTGGGATTCTGAGG+AGG + tig0021212:73968-73987 Msa1389100:CDS 60.0%
GAAGCCCCCTTGTTGCACCA+TGG + tig0021212:75154-75173 Msa1389100:CDS 60.0%
! GCAAAGAGCATGCCCCACCA+TGG - tig0021212:75760-75779 None:intergenic 60.0%
GGGGTTTGATCGGACCGAAG+CGG + tig0021212:76401-76420 Msa1389100:CDS 60.0%
CCTGGTCCGAATAGCCGCTT+CGG - tig0021212:76418-76437 None:intergenic 60.0%
AAGCGGCTATTCGGACCAGG+TGG + tig0021212:76418-76437 Msa1389100:CDS 60.0%
GGCAAGTAGCCAACGGGCAA+TGG - tig0021212:76798-76817 None:intergenic 60.0%
GCTACTTGCCCAACTGCTCC+AGG + tig0021212:76808-76827 Msa1389100:CDS 60.0%
CCGAAGCGGCTATTCGGACC+AGG + tig0021212:76415-76434 Msa1389100:CDS 65.0%
CTATCCGCGGCGCTTGATGC+AGG + tig0021212:76691-76710 Msa1389100:CDS 65.0%
! CGTGCCTGCATCAAGCGCCG+CGG - tig0021212:76698-76717 None:intergenic 70.0%
CGCGGCGCTTGATGCAGGCA+CGG + tig0021212:76696-76715 Msa1389100:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0021212 gene 72531 77192 72531 ID=Msa1389100;Name=Msa1389100
tig0021212 mRNA 72531 77192 72531 ID=Msa1389100-mRNA-1;Parent=Msa1389100;Name=Msa1389100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=179|1|1|1|1|1|6|331|740
tig0021212 exon 72531 73207 72531 ID=Msa1389100-mRNA-1:exon:11452;Parent=Msa1389100-mRNA-1
tig0021212 exon 73955 74052 73955 ID=Msa1389100-mRNA-1:exon:11453;Parent=Msa1389100-mRNA-1
tig0021212 exon 74906 75478 74906 ID=Msa1389100-mRNA-1:exon:11454;Parent=Msa1389100-mRNA-1
tig0021212 exon 75585 75840 75585 ID=Msa1389100-mRNA-1:exon:11455;Parent=Msa1389100-mRNA-1
tig0021212 exon 75969 76151 75969 ID=Msa1389100-mRNA-1:exon:11456;Parent=Msa1389100-mRNA-1
tig0021212 exon 76247 77192 76247 ID=Msa1389100-mRNA-1:exon:11457;Parent=Msa1389100-mRNA-1
tig0021212 five_prime_UTR 72531 72709 72531 ID=Msa1389100-mRNA-1:five_prime_utr;Parent=Msa1389100-mRNA-1
tig0021212 CDS 72710 73207 72710 ID=Msa1389100-mRNA-1:cds;Parent=Msa1389100-mRNA-1
tig0021212 CDS 73955 74052 73955 ID=Msa1389100-mRNA-1:cds;Parent=Msa1389100-mRNA-1
tig0021212 CDS 74906 75478 74906 ID=Msa1389100-mRNA-1:cds;Parent=Msa1389100-mRNA-1
tig0021212 CDS 75585 75840 75585 ID=Msa1389100-mRNA-1:cds;Parent=Msa1389100-mRNA-1
tig0021212 CDS 75969 76151 75969 ID=Msa1389100-mRNA-1:cds;Parent=Msa1389100-mRNA-1
tig0021212 CDS 76247 76861 76247 ID=Msa1389100-mRNA-1:cds;Parent=Msa1389100-mRNA-1
tig0021212 three_prime_UTR 76862 77192 76862 ID=Msa1389100-mRNA-1:three_prime_utr;Parent=Msa1389100-mRNA-1
Gene Sequence

>Msa1389100

ATGGCGCCAAAGAATCCAACTCCAGACACTGAAAAAGCAGCAAACGGTGTTCCCCCAGACGACAGATGTCCAATTGAAGAAGTAGCTCTCGTCGTCCCTGAAACCGACGACCCTTCTATTCCAGTCATGACTTTCCGTTCATGGTTTCTGGGAATTACTTCTTGCATCATTCTCATCTTTCTCAACACTTTCTTCACTTTCAGAACTCAACCACTAACCATTTCTGCTATTCTTATGCAAATCGCTGTTCTTCCAATTGGAAAATTCATGGCCGCCACTCTTCCCACGAAAGAGTTTAACTTTTTTGGGTGGCGTTTCACGTTGAATCCTGGTCCGTTTAATATGAAGGAGCATGTTATTATCACTATTTTTGCTAACTGTGGTGTTTCTCAAGGTGGTGGTGATGCTTACTCCATTGGTGCTATTACTATTATGAAAGCTTATTACAAACAATCTCTCAGTTTTCTCCTTGCTCTATTCATCGTCTTAACCACTCAGATATTGGGCTATGGATGGGCTGGGATTCTGAGGAGGTATCTGGTGGACCCTGTTGAAATGTGGTGGCCATCAAACCTTGCACAAGTCTCTCTCTTTAGAGCACTCCATGAAAAAGAGAATAAATCATCAAAAGGCTTTACAAGGATGCAGTTTTTCCTCATTGCCATGGGCGTTAGCTTCTTGTATTATGCACTCCCCGGCTATCTTTTCACCGTCTTAACATTCTTCTCATGGATTTGCTACGCATGGCCACATAATATCACAGCACAACAAATTGGATCAGGTTACCATGGACTTGGAATTGGTGCATTCACACTTGATTGGGCTGGAATTTCAGCTTATCATGGAAGCCCCCTTGTTGCACCATGGACTTCCATTGTTAATGTTGGGGTTGGATTTATCATGTTCATCTATATAATTCTACCCGTATGTTACTGGAGGTTTAACACTTTTGATGCTAGGAAGTTTCCTATATTCTCTAATCAGTTGTTCACGTCAAGTGGACACAAGTATGACACGACAAAGATCTTAACCAAGGAATATGATCTTAACATTGATGCATACAACAAGTATGGCAAGTTATACCTTAGTCCTCTCTTCGCATTGTCTATTGGATCAGGTTTTGCAAGATTTACGGCGACCCTCACTCATGTAGCATTATTTCATGGCAGAGACATATTGAGACAGAGTAAATCAGCAATGGGTAACGTAAAAGTTGATGTGCATGGTAGACTCATGAAAGCTTATAAGCAAGTACCAGAATGGTGGTTCCTCATTTTATTATTTGGAAGCATGGCGCTATCTTTAGTAATGGCTTTTGTTTGGAAAACGGATGTGCAACTTCCATGGTGGGGCATGCTCTTTGCTTTTGGCTTAGCTTTTGTTGTAACTCTCCCAATCGGTGTCATCCAAGCAACTACCAACCAGCAACCTGGATATGACATTATTGCACAGTTCATGATCGGGTATCTCCTTCCTGGGAAACCAATTGCAAACTTGCTCTTTAAGATTTATGGGAGAATCAGCACCGTCCATGCACTCTCTTTCTTGCAAGATCTCAAACTTGGGCACTACATGAAAATTCCCCCGCGATGCATGTATACAGCACAGCTGGTGGGAACACTAGTTGCTGGAGTGGTGAACCTTTCAGTGGCTTGGTGGATGTTGGATAGCATAAAGGACATTTGCATGGATGATAAAGCTCACCATGACAGTCCTTGGACTTGTCCCAAATACAGAGTGACATTTGATGCATCTGTTATATGGGGTTTGATCGGACCGAAGCGGCTATTCGGACCAGGTGGATTGTACCGAAACCTTGTATGGTTATTCTTGGTTGGAGCAGTGTTGCCAGTTCCTGTTTGGGTGTTTAGCAAAATCTACCCTAATAAGAAATGGATTCCTCTGATAAACATACCAGTTATATCTTATGGTTTTGCTGGAATGCCACCTGCAACTCCAACTAACATTGCAAGCTGGCTATTGACCGGAATGATCTTCAACTACTTTGTGTTCCGCTTCCACAAACGTTGGTGGCAGAAATATAATTATGTTCTATCCGCGGCGCTTGATGCAGGCACGGCTTTTATGGGTGTTTTGATTTTCTTCGCTCTGCAAAATGCAGGCCATACTCTCAAATGGTGGGGAACTGAATTGGACCATTGCCCGTTGGCTACTTGCCCAACTGCTCCAGGAATTGTGGTTGATGGTTGTCCTGTATTCTAA
Protein sequence

>Msa1389100

MAPKNPTPDTEKAANGVPPDDRCPIEEVALVVPETDDPSIPVMTFRSWFLGITSCIILIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMAATLPTKEFNFFGWRFTLNPGPFNMKEHVIITIFANCGVSQGGGDAYSIGAITIMKAYYKQSLSFLLALFIVLTTQILGYGWAGILRRYLVDPVEMWWPSNLAQVSLFRALHEKENKSSKGFTRMQFFLIAMGVSFLYYALPGYLFTVLTFFSWICYAWPHNITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVAPWTSIVNVGVGFIMFIYIILPVCYWRFNTFDARKFPIFSNQLFTSSGHKYDTTKILTKEYDLNIDAYNKYGKLYLSPLFALSIGSGFARFTATLTHVALFHGRDILRQSKSAMGNVKVDVHGRLMKAYKQVPEWWFLILLFGSMALSLVMAFVWKTDVQLPWWGMLFAFGLAFVVTLPIGVIQATTNQQPGYDIIAQFMIGYLLPGKPIANLLFKIYGRISTVHALSFLQDLKLGHYMKIPPRCMYTAQLVGTLVAGVVNLSVAWWMLDSIKDICMDDKAHHDSPWTCPKYRVTFDASVIWGLIGPKRLFGPGGLYRNLVWLFLVGAVLPVPVWVFSKIYPNKKWIPLINIPVISYGFAGMPPATPTNIASWLLTGMIFNYFVFRFHKRWWQKYNYVLSAALDAGTAFMGVLIFFALQNAGHTLKWWGTELDHCPLATCPTAPGIVVDGCPVF*