Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1226110 | XP_003629304.2 | 81.585 | 429 | 39 | 1 | 1 | 389 | 1 | 429 | 0.0 | 712 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1226110 | sp|Q8GSM7|HST_TOBAC | 59.770 | 435 | 129 | 5 | 1 | 389 | 1 | 435 | 0.0 | 536 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0617650 | Msa1226110 | 0.802458 | 5.556408e-49 | -8.615850e-47 |
Msa1226110 | Msa1294730 | 0.934785 | 2.354547e-96 | -8.615850e-47 |
Msa1143380 | Msa1226110 | 0.801238 | 9.892949e-49 | -8.615850e-47 |
Msa1201710 | Msa1226110 | 0.946521 | 3.941816e-105 | -8.615850e-47 |
Msa0485910 | Msa1226110 | 0.989119 | 9.010027e-177 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1226110 | MtrunA17_Chr8g0371821 | 81.585 | 429 | 39 | 1 | 1 | 389 | 1 | 429 | 0.0 | 712 |
Msa1226110 | MtrunA17_Chr4g0001861 | 67.667 | 433 | 96 | 4 | 1 | 389 | 1 | 433 | 0.0 | 597 |
Msa1226110 | MtrunA17_Chr2g0334001 | 63.889 | 432 | 113 | 4 | 1 | 389 | 1 | 432 | 0.0 | 558 |
Msa1226110 | MtrunA17_Chr2g0311401 | 61.794 | 301 | 72 | 4 | 132 | 389 | 2 | 302 | 7.41e-128 | 370 |
Msa1226110 | MtrunA17_Chr4g0072041 | 36.180 | 445 | 223 | 9 | 3 | 387 | 14 | 457 | 4.08e-89 | 276 |
Msa1226110 | MtrunA17_Chr4g0054081 | 36.073 | 438 | 218 | 8 | 11 | 387 | 17 | 453 | 2.52e-84 | 264 |
Msa1226110 | MtrunA17_Chr7g0253501 | 32.900 | 462 | 228 | 14 | 2 | 388 | 1 | 455 | 3.13e-74 | 238 |
Msa1226110 | MtrunA17_Chr7g0253531 | 32.684 | 462 | 229 | 14 | 2 | 388 | 1 | 455 | 2.46e-71 | 231 |
Msa1226110 | MtrunA17_Chr3g0087401 | 30.786 | 458 | 235 | 13 | 2 | 387 | 1 | 448 | 2.55e-71 | 230 |
Msa1226110 | MtrunA17_Chr3g0132001 | 32.227 | 422 | 229 | 9 | 11 | 386 | 22 | 432 | 2.03e-67 | 219 |
Msa1226110 | MtrunA17_Chr7g0224391 | 31.019 | 432 | 241 | 10 | 3 | 386 | 13 | 435 | 9.36e-63 | 207 |
Msa1226110 | MtrunA17_Chr2g0311411 | 66.197 | 142 | 48 | 0 | 1 | 142 | 1 | 142 | 2.96e-62 | 197 |
Msa1226110 | MtrunA17_Chr8g0386141 | 30.930 | 430 | 241 | 10 | 3 | 386 | 7 | 426 | 5.79e-61 | 203 |
Msa1226110 | MtrunA17_Chr7g0253541 | 30.396 | 454 | 246 | 13 | 3 | 388 | 4 | 455 | 5.44e-58 | 196 |
Msa1226110 | MtrunA17_Chr4g0004701 | 39.545 | 220 | 120 | 5 | 182 | 388 | 21 | 240 | 1.07e-49 | 167 |
Msa1226110 | MtrunA17_Chr2g0306321 | 29.058 | 382 | 209 | 12 | 22 | 348 | 40 | 414 | 6.25e-47 | 166 |
Msa1226110 | MtrunA17_Chr7g0252731 | 27.930 | 401 | 204 | 13 | 1 | 348 | 15 | 383 | 1.31e-40 | 149 |
Msa1226110 | MtrunA17_Chr1g0191081 | 25.850 | 441 | 268 | 15 | 1 | 389 | 14 | 447 | 8.60e-40 | 147 |
Msa1226110 | MtrunA17_Chr1g0165671 | 28.246 | 439 | 252 | 15 | 1 | 385 | 23 | 452 | 2.60e-39 | 146 |
Msa1226110 | MtrunA17_Chr7g0235531 | 24.153 | 443 | 270 | 9 | 3 | 388 | 4 | 437 | 2.58e-38 | 142 |
Msa1226110 | MtrunA17_Chr7g0273761 | 27.045 | 440 | 257 | 16 | 1 | 384 | 378 | 809 | 9.53e-38 | 144 |
Msa1226110 | MtrunA17_Chr8g0371851 | 68.367 | 98 | 28 | 2 | 1 | 95 | 28 | 125 | 1.29e-37 | 133 |
Msa1226110 | MtrunA17_Chr5g0433641 | 26.136 | 440 | 263 | 14 | 1 | 385 | 6 | 438 | 1.61e-36 | 138 |
Msa1226110 | MtrunA17_Chr1g0165661 | 26.492 | 419 | 252 | 12 | 3 | 372 | 9 | 420 | 3.41e-36 | 137 |
Msa1226110 | MtrunA17_Chr3g0113821 | 25.373 | 402 | 233 | 11 | 3 | 348 | 5 | 395 | 1.50e-35 | 135 |
Msa1226110 | MtrunA17_Chr3g0134041 | 26.521 | 411 | 243 | 12 | 26 | 383 | 34 | 438 | 5.69e-35 | 134 |
Msa1226110 | MtrunA17_Chr7g0273721 | 25.682 | 440 | 266 | 12 | 1 | 385 | 7 | 440 | 1.58e-34 | 132 |
Msa1226110 | MtrunA17_Chr1g0165681 | 25.908 | 413 | 252 | 10 | 8 | 372 | 14 | 420 | 3.28e-34 | 132 |
Msa1226110 | MtrunA17_Chr7g0273731 | 26.364 | 440 | 261 | 14 | 1 | 385 | 89 | 520 | 7.40e-34 | 132 |
Msa1226110 | MtrunA17_Chr3g0123061 | 25.476 | 420 | 255 | 13 | 3 | 383 | 5 | 405 | 3.75e-33 | 128 |
Msa1226110 | MtrunA17_Chr7g0273791 | 25.339 | 442 | 263 | 16 | 1 | 385 | 6 | 437 | 6.05e-33 | 128 |
Msa1226110 | MtrunA17_Chr7g0273781 | 26.047 | 430 | 257 | 13 | 9 | 385 | 49 | 470 | 7.01e-33 | 128 |
Msa1226110 | MtrunA17_Chr3g0097841 | 31.532 | 222 | 140 | 5 | 179 | 388 | 21 | 242 | 7.42e-33 | 123 |
Msa1226110 | MtrunA17_Chr4g0027071 | 25.499 | 451 | 255 | 17 | 3 | 384 | 12 | 450 | 6.59e-32 | 125 |
Msa1226110 | MtrunA17_Chr5g0442701 | 23.451 | 452 | 268 | 12 | 3 | 383 | 10 | 454 | 4.23e-31 | 123 |
Msa1226110 | MtrunA17_Chr3g0141851 | 25.587 | 426 | 248 | 16 | 11 | 383 | 20 | 429 | 7.76e-31 | 122 |
Msa1226110 | MtrunA17_Chr6g0467861 | 22.851 | 477 | 262 | 13 | 3 | 389 | 47 | 507 | 1.18e-30 | 122 |
Msa1226110 | MtrunA17_Chr3g0134091 | 27.532 | 385 | 202 | 11 | 56 | 379 | 68 | 436 | 1.20e-30 | 122 |
Msa1226110 | MtrunA17_Chr5g0442691 | 23.451 | 452 | 268 | 12 | 3 | 383 | 33 | 477 | 1.32e-30 | 122 |
Msa1226110 | MtrunA17_Chr2g0283361 | 24.153 | 443 | 265 | 15 | 2 | 384 | 1 | 432 | 1.57e-29 | 119 |
Msa1226110 | MtrunA17_Chr3g0134071 | 26.136 | 352 | 195 | 8 | 54 | 349 | 68 | 410 | 5.72e-29 | 117 |
Msa1226110 | MtrunA17_Chr4g0053091 | 26.075 | 372 | 219 | 15 | 56 | 389 | 67 | 420 | 2.78e-28 | 115 |
Msa1226110 | MtrunA17_Chr4g0004691 | 30.769 | 169 | 111 | 2 | 5 | 171 | 6 | 170 | 1.55e-27 | 107 |
Msa1226110 | MtrunA17_Chr1g0165711 | 26.651 | 424 | 218 | 15 | 9 | 385 | 15 | 392 | 2.29e-27 | 112 |
Msa1226110 | MtrunA17_Chr3g0134121 | 26.154 | 390 | 209 | 13 | 56 | 383 | 69 | 441 | 2.70e-27 | 112 |
Msa1226110 | MtrunA17_Chr3g0134061 | 25.459 | 436 | 247 | 14 | 9 | 374 | 14 | 441 | 2.97e-27 | 112 |
Msa1226110 | MtrunA17_Chr3g0134111 | 25.455 | 385 | 222 | 11 | 56 | 383 | 65 | 441 | 7.51e-27 | 111 |
Msa1226110 | MtrunA17_Chr3g0113181 | 26.065 | 399 | 212 | 12 | 56 | 379 | 66 | 456 | 8.72e-27 | 111 |
Msa1226110 | MtrunA17_Chr8g0359251 | 26.396 | 394 | 220 | 13 | 43 | 383 | 56 | 432 | 1.09e-26 | 110 |
Msa1226110 | MtrunA17_Chr8g0354371 | 26.613 | 372 | 221 | 13 | 56 | 381 | 64 | 429 | 1.11e-26 | 110 |
Msa1226110 | MtrunA17_Chr4g0010331 | 26.649 | 379 | 213 | 13 | 56 | 380 | 55 | 422 | 2.37e-26 | 109 |
Msa1226110 | MtrunA17_Chr4g0001811 | 68.493 | 73 | 17 | 2 | 318 | 389 | 15 | 82 | 3.89e-26 | 100 |
Msa1226110 | MtrunA17_Chr4g0053081 | 23.760 | 383 | 225 | 13 | 56 | 382 | 64 | 435 | 4.72e-26 | 108 |
Msa1226110 | MtrunA17_Chr8g0376901 | 23.729 | 413 | 250 | 13 | 23 | 386 | 28 | 424 | 4.87e-26 | 108 |
Msa1226110 | MtrunA17_Chr3g0106691 | 27.473 | 364 | 199 | 12 | 3 | 308 | 56 | 412 | 9.70e-26 | 108 |
Msa1226110 | MtrunA17_Chr4g0010361 | 25.714 | 385 | 216 | 10 | 56 | 380 | 55 | 429 | 3.74e-25 | 106 |
Msa1226110 | MtrunA17_Chr4g0053111 | 23.711 | 388 | 226 | 10 | 56 | 389 | 62 | 433 | 6.16e-25 | 105 |
Msa1226110 | MtrunA17_Chr5g0436621 | 21.296 | 432 | 222 | 9 | 55 | 383 | 60 | 476 | 1.63e-24 | 104 |
Msa1226110 | MtrunA17_Chr3g0095731 | 23.614 | 415 | 240 | 12 | 39 | 383 | 46 | 453 | 1.78e-24 | 104 |
Msa1226110 | MtrunA17_Chr3g0125001 | 24.868 | 378 | 221 | 14 | 56 | 381 | 55 | 421 | 2.42e-24 | 103 |
Msa1226110 | MtrunA17_Chr4g0005941 | 24.645 | 422 | 212 | 10 | 56 | 379 | 60 | 473 | 4.45e-24 | 103 |
Msa1226110 | MtrunA17_Chr5g0442721 | 22.616 | 451 | 267 | 12 | 3 | 379 | 10 | 452 | 4.66e-24 | 103 |
Msa1226110 | MtrunA17_Chr4g0010311 | 24.538 | 379 | 227 | 11 | 56 | 380 | 55 | 428 | 4.70e-24 | 103 |
Msa1226110 | MtrunA17_Chr3g0095721 | 24.697 | 413 | 229 | 14 | 51 | 388 | 65 | 470 | 5.72e-24 | 103 |
Msa1226110 | MtrunA17_Chr3g0087221 | 26.463 | 393 | 211 | 16 | 56 | 381 | 55 | 436 | 9.44e-24 | 102 |
Msa1226110 | MtrunA17_Chr3g0134101 | 25.886 | 367 | 223 | 12 | 56 | 383 | 86 | 442 | 1.03e-23 | 102 |
Msa1226110 | MtrunA17_Chr7g0224131 | 25.707 | 389 | 211 | 11 | 56 | 382 | 55 | 427 | 2.57e-23 | 100 |
Msa1226110 | MtrunA17_Chr4g0010381 | 25.648 | 386 | 215 | 15 | 56 | 381 | 55 | 428 | 2.64e-23 | 100 |
Msa1226110 | MtrunA17_Chr4g0001791 | 71.875 | 64 | 18 | 0 | 70 | 133 | 1 | 64 | 7.59e-23 | 91.7 |
Msa1226110 | MtrunA17_Chr4g0053061 | 24.165 | 389 | 225 | 9 | 56 | 382 | 87 | 467 | 8.85e-23 | 99.8 |
Msa1226110 | MtrunA17_Chr4g0001781 | 68.852 | 61 | 19 | 0 | 1 | 61 | 1 | 61 | 1.00e-22 | 90.5 |
Msa1226110 | MtrunA17_Chr3g0106721 | 27.019 | 359 | 206 | 11 | 3 | 306 | 10 | 367 | 1.47e-22 | 99.0 |
Msa1226110 | MtrunA17_Chr8g0374911 | 24.935 | 385 | 227 | 13 | 56 | 382 | 80 | 460 | 1.90e-22 | 98.6 |
Msa1226110 | MtrunA17_Chr5g0438681 | 22.444 | 401 | 258 | 11 | 24 | 383 | 26 | 414 | 3.00e-22 | 97.8 |
Msa1226110 | MtrunA17_Chr8g0374641 | 24.934 | 381 | 223 | 13 | 56 | 380 | 59 | 432 | 3.03e-22 | 97.8 |
Msa1226110 | MtrunA17_Chr5g0438701 | 22.194 | 392 | 249 | 13 | 35 | 383 | 37 | 415 | 7.80e-22 | 96.7 |
Msa1226110 | MtrunA17_Chr6g0470591 | 28.144 | 334 | 180 | 13 | 11 | 287 | 19 | 349 | 1.45e-21 | 95.9 |
Msa1226110 | MtrunA17_Chr4g0010121 | 25.356 | 351 | 194 | 13 | 56 | 349 | 99 | 438 | 2.11e-21 | 95.5 |
Msa1226110 | MtrunA17_Chr7g0252771 | 27.315 | 216 | 142 | 5 | 177 | 387 | 47 | 252 | 4.17e-21 | 91.7 |
Msa1226110 | MtrunA17_Chr7g0270771 | 28.102 | 274 | 151 | 10 | 1 | 237 | 1 | 265 | 5.34e-21 | 91.7 |
Msa1226110 | MtrunA17_Chr3g0106661 | 25.000 | 456 | 262 | 16 | 3 | 384 | 10 | 459 | 5.72e-21 | 94.4 |
Msa1226110 | MtrunA17_Chr2g0302471 | 29.139 | 151 | 98 | 2 | 2 | 151 | 3 | 145 | 1.04e-20 | 87.8 |
Msa1226110 | MtrunA17_Chr5g0408911 | 25.000 | 372 | 218 | 14 | 24 | 345 | 41 | 401 | 7.71e-20 | 90.9 |
Msa1226110 | MtrunA17_Chr8g0376891 | 21.016 | 433 | 286 | 12 | 1 | 386 | 1 | 424 | 1.18e-19 | 90.5 |
Msa1226110 | MtrunA17_Chr3g0106761 | 25.397 | 315 | 171 | 11 | 45 | 307 | 9 | 311 | 3.64e-19 | 88.6 |
Msa1226110 | MtrunA17_Chr7g0219241 | 22.759 | 435 | 243 | 16 | 32 | 388 | 52 | 471 | 1.72e-18 | 87.0 |
Msa1226110 | MtrunA17_Chr7g0274021 | 24.367 | 316 | 195 | 8 | 35 | 308 | 40 | 353 | 2.30e-18 | 86.7 |
Msa1226110 | MtrunA17_Chr6g0455341 | 23.558 | 416 | 239 | 14 | 39 | 385 | 50 | 455 | 4.42e-18 | 85.5 |
Msa1226110 | MtrunA17_Chr7g0253521 | 31.538 | 130 | 76 | 4 | 271 | 388 | 16 | 144 | 6.26e-18 | 80.1 |
Msa1226110 | MtrunA17_Chr8g0361781 | 24.311 | 399 | 234 | 21 | 4 | 347 | 4 | 389 | 8.38e-18 | 84.7 |
Msa1226110 | MtrunA17_Chr8g0361771 | 22.637 | 402 | 243 | 18 | 1 | 347 | 1 | 389 | 9.45e-18 | 84.7 |
Msa1226110 | MtrunA17_Chr1g0199561 | 24.528 | 371 | 209 | 14 | 35 | 347 | 37 | 394 | 1.56e-17 | 84.0 |
Msa1226110 | MtrunA17_Chr7g0273741 | 33.566 | 143 | 89 | 4 | 1 | 137 | 6 | 148 | 2.55e-17 | 78.6 |
Msa1226110 | MtrunA17_Chr3g0106741 | 26.531 | 294 | 152 | 12 | 70 | 308 | 59 | 343 | 3.41e-17 | 82.8 |
Msa1226110 | MtrunA17_Chr6g0471371 | 35.556 | 135 | 83 | 3 | 7 | 137 | 13 | 147 | 2.82e-16 | 76.3 |
Msa1226110 | MtrunA17_Chr7g0252761 | 32.051 | 156 | 96 | 5 | 1 | 150 | 14 | 165 | 3.99e-16 | 75.5 |
Msa1226110 | MtrunA17_Chr6g0454761 | 21.905 | 420 | 241 | 17 | 39 | 385 | 532 | 937 | 5.87e-16 | 80.1 |
Msa1226110 | MtrunA17_Chr3g0134131 | 26.087 | 230 | 125 | 5 | 124 | 344 | 90 | 283 | 1.52e-14 | 73.9 |
Msa1226110 | MtrunA17_Chr3g0097851 | 32.222 | 90 | 61 | 0 | 209 | 298 | 25 | 114 | 2.01e-14 | 69.3 |
Msa1226110 | MtrunA17_Chr1g0165741 | 32.374 | 139 | 90 | 3 | 3 | 137 | 9 | 147 | 2.48e-14 | 70.1 |
Msa1226110 | MtrunA17_Chr7g0219181 | 22.083 | 480 | 266 | 19 | 3 | 388 | 8 | 473 | 1.53e-13 | 72.0 |
Msa1226110 | MtrunA17_Chr6g0471381 | 28.824 | 170 | 109 | 4 | 209 | 372 | 66 | 229 | 3.24e-13 | 69.3 |
Msa1226110 | MtrunA17_Chr5g0438721 | 28.571 | 119 | 80 | 2 | 56 | 173 | 9 | 123 | 3.81e-13 | 66.2 |
Msa1226110 | MtrunA17_Chr8g0353901 | 25.366 | 205 | 147 | 4 | 182 | 382 | 19 | 221 | 8.36e-13 | 67.8 |
Msa1226110 | MtrunA17_Chr3g0098961 | 33.663 | 101 | 65 | 2 | 9 | 107 | 19 | 119 | 2.59e-12 | 65.1 |
Msa1226110 | MtrunA17_Chr7g0219301 | 24.316 | 329 | 196 | 16 | 29 | 343 | 545 | 834 | 7.80e-12 | 67.0 |
Msa1226110 | MtrunA17_Chr8g0353421 | 34.343 | 99 | 63 | 2 | 11 | 107 | 17 | 115 | 1.04e-11 | 62.0 |
Msa1226110 | MtrunA17_Chr3g0097831 | 35.366 | 82 | 52 | 1 | 2 | 82 | 1 | 82 | 1.29e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1226110 | AT5G48930.1 | 59.353 | 433 | 132 | 4 | 1 | 389 | 1 | 433 | 0.0 | 525 |
Msa1226110 | AT2G19070.1 | 35.635 | 449 | 223 | 9 | 3 | 388 | 4 | 449 | 6.89e-85 | 265 |
Msa1226110 | AT5G57840.1 | 33.634 | 443 | 234 | 7 | 1 | 389 | 1 | 437 | 1.78e-83 | 261 |
Msa1226110 | AT5G41040.2 | 29.655 | 435 | 248 | 8 | 3 | 389 | 17 | 441 | 3.18e-64 | 212 |
Msa1226110 | AT3G48720.1 | 30.536 | 429 | 246 | 8 | 2 | 386 | 8 | 428 | 3.37e-64 | 211 |
Msa1226110 | AT5G41040.1 | 29.655 | 435 | 248 | 8 | 3 | 389 | 33 | 457 | 4.50e-64 | 212 |
Msa1226110 | AT5G63560.1 | 29.002 | 431 | 248 | 7 | 1 | 386 | 7 | 424 | 1.10e-62 | 207 |
Msa1226110 | AT1G03390.1 | 27.083 | 432 | 249 | 13 | 13 | 386 | 32 | 455 | 1.03e-45 | 163 |
Msa1226110 | AT1G27620.1 | 30.871 | 379 | 202 | 12 | 56 | 387 | 58 | 423 | 4.39e-44 | 159 |
Msa1226110 | AT5G17540.1 | 27.570 | 428 | 250 | 12 | 9 | 384 | 15 | 434 | 5.06e-42 | 153 |
Msa1226110 | AT3G03480.1 | 28.046 | 435 | 246 | 13 | 3 | 382 | 19 | 441 | 5.05e-40 | 148 |
Msa1226110 | AT1G65450.1 | 26.914 | 405 | 224 | 12 | 1 | 348 | 16 | 405 | 2.12e-39 | 146 |
Msa1226110 | AT2G40230.1 | 24.374 | 439 | 264 | 13 | 2 | 386 | 4 | 428 | 1.91e-36 | 138 |
Msa1226110 | AT1G28680.1 | 25.000 | 448 | 257 | 14 | 3 | 384 | 4 | 438 | 1.86e-34 | 132 |
Msa1226110 | AT5G07860.1 | 27.105 | 380 | 213 | 9 | 56 | 383 | 72 | 439 | 8.89e-32 | 125 |
Msa1226110 | AT1G78990.1 | 26.290 | 407 | 233 | 11 | 33 | 384 | 45 | 439 | 7.23e-31 | 123 |
Msa1226110 | AT1G24430.1 | 27.390 | 387 | 227 | 17 | 3 | 347 | 5 | 379 | 2.72e-30 | 121 |
Msa1226110 | AT1G28680.2 | 25.843 | 356 | 209 | 10 | 3 | 307 | 4 | 355 | 2.94e-30 | 120 |
Msa1226110 | AT1G32910.1 | 25.984 | 381 | 215 | 12 | 53 | 375 | 62 | 433 | 1.72e-29 | 119 |
Msa1226110 | AT5G16410.1 | 25.377 | 398 | 228 | 12 | 24 | 366 | 61 | 444 | 1.07e-28 | 117 |
Msa1226110 | AT5G23940.1 | 26.121 | 379 | 222 | 11 | 56 | 380 | 65 | 439 | 1.27e-28 | 117 |
Msa1226110 | AT3G50270.1 | 25.408 | 429 | 251 | 16 | 8 | 381 | 11 | 425 | 3.22e-28 | 115 |
Msa1226110 | AT3G50280.1 | 25.065 | 383 | 225 | 11 | 56 | 389 | 59 | 428 | 3.68e-28 | 115 |
Msa1226110 | AT5G07870.1 | 25.323 | 387 | 223 | 10 | 56 | 383 | 72 | 451 | 6.22e-28 | 114 |
Msa1226110 | AT5G42830.1 | 24.806 | 387 | 221 | 9 | 56 | 383 | 64 | 439 | 7.19e-28 | 114 |
Msa1226110 | AT5G01210.1 | 25.840 | 387 | 209 | 8 | 67 | 379 | 73 | 455 | 8.28e-28 | 114 |
Msa1226110 | AT3G50300.1 | 25.653 | 421 | 256 | 14 | 3 | 370 | 4 | 420 | 1.56e-27 | 113 |
Msa1226110 | AT5G67160.1 | 26.781 | 351 | 190 | 10 | 52 | 349 | 52 | 388 | 2.66e-27 | 112 |
Msa1226110 | AT3G26040.1 | 24.884 | 430 | 267 | 13 | 1 | 384 | 1 | 420 | 3.88e-27 | 112 |
Msa1226110 | AT5G47950.1 | 25.191 | 393 | 251 | 13 | 24 | 384 | 29 | 410 | 7.82e-27 | 111 |
Msa1226110 | AT3G62160.1 | 25.389 | 386 | 221 | 13 | 53 | 388 | 52 | 420 | 9.17e-27 | 111 |
Msa1226110 | AT5G67150.1 | 26.963 | 382 | 213 | 15 | 56 | 380 | 61 | 433 | 1.29e-26 | 110 |
Msa1226110 | AT3G30280.1 | 24.480 | 433 | 259 | 15 | 1 | 379 | 4 | 422 | 1.29e-26 | 110 |
Msa1226110 | AT5G07850.1 | 24.802 | 379 | 229 | 12 | 56 | 383 | 70 | 443 | 2.55e-25 | 107 |
Msa1226110 | AT5G07080.1 | 25.000 | 448 | 256 | 16 | 1 | 384 | 12 | 443 | 7.76e-25 | 105 |
Msa1226110 | AT4G15390.1 | 23.529 | 442 | 263 | 17 | 1 | 384 | 6 | 430 | 1.27e-24 | 105 |
Msa1226110 | AT4G15390.2 | 23.529 | 442 | 263 | 17 | 1 | 384 | 6 | 430 | 1.27e-24 | 105 |
Msa1226110 | AT3G47170.1 | 27.855 | 359 | 180 | 14 | 10 | 301 | 19 | 365 | 6.58e-24 | 103 |
Msa1226110 | AT5G38130.1 | 25.472 | 424 | 261 | 15 | 3 | 375 | 24 | 443 | 9.24e-24 | 102 |
Msa1226110 | AT3G50280.2 | 24.752 | 303 | 171 | 8 | 129 | 389 | 11 | 298 | 1.33e-23 | 100 |
Msa1226110 | AT5G23970.1 | 23.515 | 421 | 274 | 13 | 1 | 383 | 1 | 411 | 1.58e-23 | 102 |
Msa1226110 | AT5G47980.1 | 23.251 | 443 | 255 | 17 | 3 | 382 | 5 | 425 | 6.85e-22 | 97.4 |
Msa1226110 | AT1G24420.2 | 23.481 | 362 | 214 | 11 | 67 | 383 | 76 | 419 | 9.61e-22 | 96.7 |
Msa1226110 | AT1G24420.1 | 23.481 | 362 | 214 | 11 | 67 | 383 | 76 | 419 | 9.61e-22 | 96.7 |
Msa1226110 | AT2G39980.1 | 22.143 | 420 | 216 | 11 | 56 | 379 | 62 | 466 | 3.96e-20 | 92.4 |
Msa1226110 | AT2G25150.1 | 21.995 | 441 | 281 | 15 | 1 | 383 | 11 | 446 | 5.32e-20 | 91.7 |
Msa1226110 | AT4G15400.1 | 24.186 | 430 | 259 | 16 | 3 | 382 | 5 | 417 | 6.61e-19 | 88.6 |
Msa1226110 | AT3G50290.1 | 24.815 | 270 | 160 | 6 | 114 | 341 | 1 | 269 | 7.86e-18 | 83.2 |
Msa1226110 | AT5G61160.1 | 23.389 | 419 | 245 | 15 | 36 | 387 | 38 | 447 | 8.44e-18 | 85.1 |
Msa1226110 | AT1G65450.3 | 30.000 | 180 | 106 | 5 | 178 | 348 | 73 | 241 | 3.12e-17 | 81.6 |
Msa1226110 | AT4G31910.1 | 25.191 | 393 | 212 | 18 | 19 | 341 | 27 | 407 | 1.08e-16 | 82.0 |
Msa1226110 | AT5G39050.1 | 22.254 | 346 | 192 | 9 | 110 | 387 | 128 | 464 | 2.57e-13 | 71.6 |
Find 96 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAATCTATGATGCTGATTT+TGG | 0.174848 | 8_1:-91850355 | Msa1226110:CDS |
AATCTTGGCGTCGAAGAATT+TGG | 0.180314 | 8_1:+91852543 | None:intergenic |
GACTCATTCATAGATGATTT+TGG | 0.200306 | 8_1:-91852391 | Msa1226110:CDS |
ATCTGTTGGGATATACAATT+TGG | 0.202242 | 8_1:+91850645 | None:intergenic |
TGAGCACATGGAAGTGTTTA+AGG | 0.217722 | 8_1:-91850221 | Msa1226110:CDS |
GATTGTGTTGCCAACTTCTT+TGG | 0.243766 | 8_1:+91850750 | None:intergenic |
TGGCGTCTTCAAATCAATAT+TGG | 0.296957 | 8_1:+91852612 | None:intergenic |
GTTGATTACTCGCACGGAAT+TGG | 0.305256 | 8_1:-91852325 | Msa1226110:CDS |
GCCCCAGGTCCCATGAAAAT+TGG | 0.308839 | 8_1:+91850322 | None:intergenic |
TATCTAGCGGATGGAGCTTC+TGG | 0.323110 | 8_1:-91851008 | Msa1226110:CDS |
CATGGAAGTGTTTAAGGAAT+TGG | 0.330065 | 8_1:-91850215 | Msa1226110:CDS |
CTCCCATCATTTGTTGAGCT+TGG | 0.337911 | 8_1:+91850271 | None:intergenic |
AACCTTGATCTTCCATCTGT+TGG | 0.339884 | 8_1:+91850631 | None:intergenic |
ACGCTGGGCGTGTGCACATT+TGG | 0.345761 | 8_1:+91852592 | None:intergenic |
GTATCCCCTCCTAGTGTTGC+AGG | 0.361289 | 8_1:-91852299 | Msa1226110:intron |
CAACTAACGATCGCAAGATT+TGG | 0.361643 | 8_1:+91850388 | None:intergenic |
GAGAGCTTTCTTCATAATCT+TGG | 0.393839 | 8_1:+91852528 | None:intergenic |
AGATCACTTGCTAGAGCTAT+AGG | 0.414190 | 8_1:+91850556 | None:intergenic |
CTTGTTACATTCTCTGAGCC+AGG | 0.415957 | 8_1:+91850823 | None:intergenic |
AGATGTTAGCTGGTCATGTT+TGG | 0.416361 | 8_1:-91850711 | Msa1226110:CDS |
AAGCTCCATCCGCTAGATAA+TGG | 0.417712 | 8_1:+91851012 | None:intergenic |
CAAATCTTGCGATCGTTAGT+TGG | 0.432391 | 8_1:-91850387 | Msa1226110:CDS |
CAATTTGGTTTCTTGATCAT+CGG | 0.436135 | 8_1:+91850660 | None:intergenic |
ATTCCAAGCTCAACAAATGA+TGG | 0.437823 | 8_1:-91850274 | Msa1226110:CDS |
ACCTTGATCTTCCATCTGTT+GGG | 0.438044 | 8_1:+91850632 | None:intergenic |
CCAAAATCAGCATCATAGAT+TGG | 0.443349 | 8_1:+91850355 | None:intergenic |
AATTTGGTTTCTTGATCATC+GGG | 0.446925 | 8_1:+91850661 | None:intergenic |
AAATCTTGCGATCGTTAGTT+GGG | 0.456385 | 8_1:-91850386 | Msa1226110:CDS |
AAATGATGGGAGTTTATCTC+TGG | 0.468887 | 8_1:-91850260 | Msa1226110:CDS |
GGACCTGGGGCTGATTGTGA+TGG | 0.472141 | 8_1:-91850310 | Msa1226110:CDS |
GGCGTCGAAGAATTTGGAAA+TGG | 0.476256 | 8_1:+91852549 | None:intergenic |
GAAGAATTTGGAAATGGTGT+TGG | 0.485713 | 8_1:+91852555 | None:intergenic |
GAGGAGTCTCACTAGGTGTT+GGG | 0.500601 | 8_1:-91851040 | Msa1226110:CDS |
AGATTGACTGCGACGGTCAA+GGG | 0.512197 | 8_1:-91852438 | Msa1226110:CDS |
GACTTGAGAAGATGATCGAT+GGG | 0.512591 | 8_1:+91855115 | None:intergenic |
GTCTCATTCTATCCAATGGC+AGG | 0.512688 | 8_1:-91852493 | Msa1226110:CDS |
GTTGCAACCTCCACTTCCAT+CGG | 0.513383 | 8_1:-91850611 | Msa1226110:CDS |
ACCACTTATGAGATGTTAGC+TGG | 0.515378 | 8_1:-91850721 | Msa1226110:CDS |
CCGAAGTAACCCGATGGAAG+TGG | 0.519068 | 8_1:+91850601 | None:intergenic |
TTGTTACATTCTCTGAGCCA+GGG | 0.519910 | 8_1:+91850824 | None:intergenic |
CCCATTGTTGATTACTCGCA+CGG | 0.520681 | 8_1:-91852331 | Msa1226110:CDS |
TTGCAACCTCCACTTCCATC+GGG | 0.527792 | 8_1:-91850610 | Msa1226110:CDS |
AGGTTGCACGACAGAGGGTG+TGG | 0.528209 | 8_1:-91852639 | Msa1226110:CDS |
ACCAGCTAACATCTCATAAG+TGG | 0.532159 | 8_1:+91850720 | None:intergenic |
GGAGGAGTCTCACTAGGTGT+TGG | 0.533578 | 8_1:-91851041 | Msa1226110:CDS |
GAGATTGACTGCGACGGTCA+AGG | 0.536807 | 8_1:-91852439 | Msa1226110:CDS |
TGTCGTGCAACCTCCTCTGA+TGG | 0.537379 | 8_1:+91852649 | None:intergenic |
TCACAATGCATTGTTGCGAA+TGG | 0.539746 | 8_1:-91850497 | Msa1226110:CDS |
CCGTGCGAGTAATCAACAAT+GGG | 0.543465 | 8_1:+91852331 | None:intergenic |
CTGCTTACAGCATACCATGT+TGG | 0.546067 | 8_1:+91850523 | None:intergenic |
TGAAACATACCTGCAACACT+AGG | 0.550704 | 8_1:+91852290 | None:intergenic |
AAAGCTAAGTCCAAAGAAGT+TGG | 0.554521 | 8_1:-91850760 | Msa1226110:CDS |
AGACTTGAGAAGATGATCGA+TGG | 0.563265 | 8_1:+91855114 | None:intergenic |
TTCCAAGCTCAACAAATGAT+GGG | 0.564691 | 8_1:-91850273 | Msa1226110:CDS |
GCTTGTCTCATTCTATCCAA+TGG | 0.577382 | 8_1:-91852497 | Msa1226110:CDS |
GACACTTAACATTAGCGTTG+CGG | 0.578284 | 8_1:+91850410 | None:intergenic |
TGTTACATTCTCTGAGCCAG+GGG | 0.579400 | 8_1:+91850825 | None:intergenic |
CCACTTCCATCGGGTTACTT+CGG | 0.580903 | 8_1:-91850601 | Msa1226110:CDS |
TGATCGATGGGGAGGAGCAG+AGG | 0.581841 | 8_1:+91855127 | None:intergenic |
ATGCACCATTATCTAGCGGA+TGG | 0.586149 | 8_1:-91851017 | Msa1226110:CDS |
TTCTCTTCAACATGAGCACA+TGG | 0.587094 | 8_1:-91850233 | Msa1226110:CDS |
AAATGTGGAGGAGTCTCACT+AGG | 0.587340 | 8_1:-91851047 | Msa1226110:CDS |
TAAGATGGTGCAACCATCAG+AGG | 0.588848 | 8_1:-91852662 | Msa1226110:CDS |
AACATACCTGCAACACTAGG+AGG | 0.589335 | 8_1:+91852293 | None:intergenic |
CAGGTAACATACTTCAAATG+TGG | 0.592022 | 8_1:-91851062 | Msa1226110:CDS |
CTTCTCAAGTCTCAACCTCA+AGG | 0.592352 | 8_1:-91855103 | Msa1226110:intron |
GTATTCACTTCATCAATACA+TGG | 0.592850 | 8_1:-91850986 | Msa1226110:CDS |
AGTTTGCACAAGTGCAATGT+GGG | 0.593249 | 8_1:+91852358 | None:intergenic |
AAATTGTATATCCCAACAGA+TGG | 0.596360 | 8_1:-91850643 | Msa1226110:CDS |
TAAGTGTTGTGTTGTTGTCG+TGG | 0.596711 | 8_1:+91855168 | None:intergenic |
TCCCAACAGATGGAAGATCA+AGG | 0.597699 | 8_1:-91850633 | Msa1226110:CDS |
ACATACCTGCAACACTAGGA+GGG | 0.599464 | 8_1:+91852294 | None:intergenic |
GGTTCTATAGAAGTAAACGC+TGG | 0.599513 | 8_1:+91852576 | None:intergenic |
TCCGTGCGAGTAATCAACAA+TGG | 0.601479 | 8_1:+91852330 | None:intergenic |
GATTGACTGCGACGGTCAAG+GGG | 0.613982 | 8_1:-91852437 | Msa1226110:CDS |
GTTCTATAGAAGTAAACGCT+GGG | 0.614614 | 8_1:+91852577 | None:intergenic |
AGAGGAGGTTGCACGACAGA+GGG | 0.614646 | 8_1:-91852644 | Msa1226110:CDS |
CGTCGCAGTCAATCTCCACT+CGG | 0.618119 | 8_1:+91852446 | None:intergenic |
AGTCCATCACAATCAGCCCC+AGG | 0.618805 | 8_1:+91850307 | None:intergenic |
AAATGTGAGAGATTCTAAGA+TGG | 0.628367 | 8_1:-91852677 | Msa1226110:CDS |
CAGAGGAGGTTGCACGACAG+AGG | 0.628673 | 8_1:-91852645 | Msa1226110:CDS |
TGAGAAGATGATCGATGGGG+AGG | 0.633457 | 8_1:+91855119 | None:intergenic |
CATACCTGCAACACTAGGAG+GGG | 0.639094 | 8_1:+91852295 | None:intergenic |
AAGTAACCCGATGGAAGTGG+AGG | 0.642861 | 8_1:+91850604 | None:intergenic |
GTAACATACTTCAAATGTGG+AGG | 0.650078 | 8_1:-91851059 | Msa1226110:CDS |
AAGTTTGCACAAGTGCAATG+TGG | 0.654616 | 8_1:+91852357 | None:intergenic |
GTTACATTCTCTGAGCCAGG+GGG | 0.664833 | 8_1:+91850826 | None:intergenic |
GATGGTGCAACCATCAGAGG+AGG | 0.670764 | 8_1:-91852659 | Msa1226110:CDS |
ATCTCATGTCAAAACCAACA+TGG | 0.673675 | 8_1:-91850537 | Msa1226110:CDS |
ACATTGCCGAAGTAACCCGA+TGG | 0.677759 | 8_1:+91850595 | None:intergenic |
TATGAAGAAAGCTCTCAGCA+AGG | 0.680412 | 8_1:-91852521 | Msa1226110:CDS |
TTACGACAAAGAGGACCGAG+TGG | 0.693636 | 8_1:-91852461 | Msa1226110:CDS |
TGGGATGCACCATTATCTAG+CGG | 0.698386 | 8_1:-91851021 | Msa1226110:CDS |
ACTTGAGAAGATGATCGATG+GGG | 0.732649 | 8_1:+91855116 | None:intergenic |
ACTTGCTAGAGCTATAGGTG+CGG | 0.736048 | 8_1:+91850561 | None:intergenic |
CGAGTGGAGATTGACTGCGA+CGG | 0.747066 | 8_1:-91852445 | Msa1226110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTTATATATAAATAT+TGG | + | chr8_1:91850364-91850383 | None:intergenic | 0.0% |
!! | TTTATATATAAATATTGGAA+TGG | + | chr8_1:91850359-91850378 | None:intergenic | 10.0% |
!!! | ATATAAATAAAATGTAGTTT+TGG | - | chr8_1:91850372-91850391 | Msa1226110:CDS | 10.0% |
!!! | TTTTTTAAAATCAAAACTTT+TGG | - | chr8_1:91850433-91850452 | Msa1226110:CDS | 10.0% |
!! | ACAAATTATTCAAATTAAAA+AGG | + | chr8_1:91851046-91851065 | None:intergenic | 10.0% |
!!! | TTTTAGCATATAATTTTATT+TGG | + | chr8_1:91852195-91852214 | None:intergenic | 10.0% |
!! | ATGAAAATAATAAAGAAACA+TGG | + | chr8_1:91850298-91850317 | None:intergenic | 15.0% |
!!! | GACAATTAATTACTATTTTA+AGG | + | chr8_1:91850490-91850509 | None:intergenic | 15.0% |
!!! | ATTAATTGTCCAAATTTTTT+AGG | - | chr8_1:91850500-91850519 | Msa1226110:CDS | 15.0% |
!! | ATCAATCTATTATATTTCTT+TGG | - | chr8_1:91853174-91853193 | Msa1226110:intron | 15.0% |
!! | TTATTAAATGAATCTTAAAG+TGG | - | chr8_1:91853280-91853299 | Msa1226110:intron | 15.0% |
!! | GAAAATATCAAAAACTAATT+TGG | + | chr8_1:91853554-91853573 | None:intergenic | 15.0% |
!! | AATTTGAGTAAAGATAATTA+TGG | - | chr8_1:91853685-91853704 | Msa1226110:intron | 15.0% |
!! | AAATAAAAAACAGATGTATT+AGG | - | chr8_1:91854180-91854199 | Msa1226110:intron | 15.0% |
!! | CACAACAAATTTGATATTAA+AGG | + | chr8_1:91850460-91850479 | None:intergenic | 20.0% |
!!! | TATCAAATTTGTTGTGATTT+TGG | - | chr8_1:91850464-91850483 | Msa1226110:CDS | 20.0% |
!!! | TATTACATTGGTTACAATTA+TGG | + | chr8_1:91850566-91850585 | None:intergenic | 20.0% |
!!! | TTGGTCTTTAATTATTACAT+TGG | + | chr8_1:91850578-91850597 | None:intergenic | 20.0% |
!!! | TTTTTATCCTTCATTTATTG+AGG | + | chr8_1:91850928-91850947 | None:intergenic | 20.0% |
!! | TTTGCAAAAAAAGATTGAAT+TGG | + | chr8_1:91851251-91851270 | None:intergenic | 20.0% |
!! | TATATAAACACTTACTAGTT+GGG | + | chr8_1:91851405-91851424 | None:intergenic | 20.0% |
!! | TTATATAAACACTTACTAGT+TGG | + | chr8_1:91851406-91851425 | None:intergenic | 20.0% |
!! | AACTAGTAAGTGTTTATATA+AGG | - | chr8_1:91851405-91851424 | Msa1226110:intron | 20.0% |
!! | ACTAGTAAGTGTTTATATAA+GGG | - | chr8_1:91851406-91851425 | Msa1226110:intron | 20.0% |
!! | TAATCTAAATTGGAAATATC+CGG | + | chr8_1:91851628-91851647 | None:intergenic | 20.0% |
!! | ATTATATATCCATCAACAAA+AGG | - | chr8_1:91852270-91852289 | Msa1226110:intron | 20.0% |
!!! | GACAAATGAATAATTTTGAT+TGG | - | chr8_1:91852422-91852441 | Msa1226110:CDS | 20.0% |
!! | TAAACCATTTACAATTATTG+AGG | + | chr8_1:91853449-91853468 | None:intergenic | 20.0% |
!!! | ATTTGGTATTATTTTTTGTC+AGG | + | chr8_1:91853537-91853556 | None:intergenic | 20.0% |
!! | ATATATATATATAGATGGAC+AGG | + | chr8_1:91853762-91853781 | None:intergenic | 20.0% |
!!! | TAAAGAAAAATGATTTTGAG+TGG | - | chr8_1:91853793-91853812 | Msa1226110:intron | 20.0% |
!! | GACTTTTAGCCTAAAAAATT+TGG | + | chr8_1:91850512-91850531 | None:intergenic | 25.0% |
!! | GCTTTTATAATCAAGCTATT+TGG | + | chr8_1:91850597-91850616 | None:intergenic | 25.0% |
! | CAATAAAAACTTGATATACG+TGG | - | chr8_1:91850817-91850836 | Msa1226110:CDS | 25.0% |
! | AGGATAAAAAAACTTAGAGA+AGG | - | chr8_1:91850938-91850957 | Msa1226110:intron | 25.0% |
! | TTCTTTCACTAATTGTGTTA+TGG | - | chr8_1:91850967-91850986 | Msa1226110:intron | 25.0% |
! | AACACTTATACTTTAATCGT+TGG | + | chr8_1:91851106-91851125 | None:intergenic | 25.0% |
!!! | AATCTTTTTTTGCAAACGTA+TGG | - | chr8_1:91851255-91851274 | Msa1226110:intron | 25.0% |
! | TTTATTGAGTTTAACCATGT+TGG | - | chr8_1:91851281-91851300 | Msa1226110:intron | 25.0% |
! | GTTAATTCTAGTGAGAAAAT+TGG | - | chr8_1:91851311-91851330 | Msa1226110:intron | 25.0% |
! | ATATAAACACTTACTAGTTG+GGG | + | chr8_1:91851404-91851423 | None:intergenic | 25.0% |
! | TAAGTCTGCTTAATCTAAAT+TGG | + | chr8_1:91851638-91851657 | None:intergenic | 25.0% |
! | AGAGTTCATAACAAAAAAAC+GGG | + | chr8_1:91851723-91851742 | None:intergenic | 25.0% |
! | CAGAGTTCATAACAAAAAAA+CGG | + | chr8_1:91851724-91851743 | None:intergenic | 25.0% |
! | AATGATTCGTTAACACAAAT+CGG | + | chr8_1:91851842-91851861 | None:intergenic | 25.0% |
!!! | TTTTATCCACTTTTCTTGAT+GGG | - | chr8_1:91852466-91852485 | Msa1226110:CDS | 25.0% |
!!! | TTATGATCATCGTAGTTTTT+TGG | + | chr8_1:91852672-91852691 | None:intergenic | 25.0% |
! | CAAACCTCAATAATTGTAAA+TGG | - | chr8_1:91853442-91853461 | Msa1226110:intron | 25.0% |
! | TCTGACTCACTATAATATAT+AGG | + | chr8_1:91853599-91853618 | None:intergenic | 25.0% |
!!! | TCCTCGATATTTTTATATCT+GGG | + | chr8_1:91853633-91853652 | None:intergenic | 25.0% |
! | ATAATTATGGAGACCAAAAT+GGG | - | chr8_1:91853698-91853717 | Msa1226110:intron | 25.0% |
!! | CTCATATGCAAATTTGTTTA+AGG | + | chr8_1:91853840-91853859 | None:intergenic | 25.0% |
! | TAATCAAAATAAGAGACGTT+TGG | - | chr8_1:91853977-91853996 | Msa1226110:intron | 25.0% |
! | ACACAAAAATGATACCATAT+AGG | + | chr8_1:91854219-91854238 | None:intergenic | 25.0% |
! | AATTCAACGTGATCAAAAAT+GGG | + | chr8_1:91854487-91854506 | None:intergenic | 25.0% |
TGTAAGTGTGACAAAATAAG+TGG | + | chr8_1:91850399-91850418 | None:intergenic | 30.0% | |
!!! | ACTCATCAGTTTTGAGTTAA+AGG | - | chr8_1:91851197-91851216 | Msa1226110:intron | 30.0% |
!!! | CTCATCAGTTTTGAGTTAAA+GGG | - | chr8_1:91851198-91851217 | Msa1226110:intron | 30.0% |
AATTAACTAGTGTTCCAACA+TGG | + | chr8_1:91851298-91851317 | None:intergenic | 30.0% | |
GACTTAAAAATGTCTCACAT+TGG | - | chr8_1:91851371-91851390 | Msa1226110:intron | 30.0% | |
AGTAAGTGTTTATATAAGGG+TGG | - | chr8_1:91851409-91851428 | Msa1226110:intron | 30.0% | |
GTAAGTGTTTATATAAGGGT+GGG | - | chr8_1:91851410-91851429 | Msa1226110:intron | 30.0% | |
TAAGTGTTTATATAAGGGTG+GGG | - | chr8_1:91851411-91851430 | Msa1226110:intron | 30.0% | |
!! | AACAAAAAAACGGGTTACTT+GGG | + | chr8_1:91851714-91851733 | None:intergenic | 30.0% |
!! | TAACAAAAAAACGGGTTACT+TGG | + | chr8_1:91851715-91851734 | None:intergenic | 30.0% |
ATATACCGAACGAAATTACT+GGG | + | chr8_1:91852151-91852170 | None:intergenic | 30.0% | |
AATATACCGAACGAAATTAC+TGG | + | chr8_1:91852152-91852171 | None:intergenic | 30.0% | |
ATATATCCATCAACAAAAGG+TGG | - | chr8_1:91852273-91852292 | Msa1226110:intron | 30.0% | |
!!! | TTCATAATACATGTCGCTTT+TGG | + | chr8_1:91852359-91852378 | None:intergenic | 30.0% |
AAGCGACATGTATTATGAAA+CGG | - | chr8_1:91852360-91852379 | Msa1226110:CDS | 30.0% | |
AAGTGGATAAAAGTAACTCA+TGG | + | chr8_1:91852458-91852477 | None:intergenic | 30.0% | |
!! | CTTTTATCCACTTTTCTTGA+TGG | - | chr8_1:91852465-91852484 | Msa1226110:CDS | 30.0% |
!! | ACCATTATAGTTGATAGTGT+AGG | - | chr8_1:91852640-91852659 | Msa1226110:CDS | 30.0% |
TCCTACACTATCAACTATAA+TGG | + | chr8_1:91852644-91852663 | None:intergenic | 30.0% | |
! | AAATGTGAGAGATTCTAAGA+TGG | - | chr8_1:91852690-91852709 | Msa1226110:exon | 30.0% |
! | GACTCATTCATAGATGATTT+TGG | - | chr8_1:91852976-91852995 | Msa1226110:intron | 30.0% |
AGCGAGTAGTTAATAAGATT+TGG | - | chr8_1:91853328-91853347 | Msa1226110:intron | 30.0% | |
TCCCAGATATAAAAATATCG+AGG | - | chr8_1:91853629-91853648 | Msa1226110:intron | 30.0% | |
!! | GTCCTCGATATTTTTATATC+TGG | + | chr8_1:91853634-91853653 | None:intergenic | 30.0% |
GATAATTATGGAGACCAAAA+TGG | - | chr8_1:91853697-91853716 | Msa1226110:intron | 30.0% | |
! | CAAAGAATTAATGCCCATTT+TGG | + | chr8_1:91853714-91853733 | None:intergenic | 30.0% |
TTTATCAAAGATAATTCGCG+TGG | - | chr8_1:91853735-91853754 | Msa1226110:intron | 30.0% | |
! | ATGGTGCAATATTTTGTAGA+TGG | - | chr8_1:91854108-91854127 | Msa1226110:intron | 30.0% |
GTGATAGTAGAATACCTATA+TGG | - | chr8_1:91854202-91854221 | Msa1226110:intron | 30.0% | |
GTATTCACTTCATCAATACA+TGG | - | chr8_1:91854381-91854400 | Msa1226110:intron | 30.0% | |
GAATTCAACGTGATCAAAAA+TGG | + | chr8_1:91854488-91854507 | None:intergenic | 30.0% | |
! | AATTTGGTTTCTTGATCATC+GGG | + | chr8_1:91854709-91854728 | None:intergenic | 30.0% |
! | CAATTTGGTTTCTTGATCAT+CGG | + | chr8_1:91854710-91854729 | None:intergenic | 30.0% |
ATCTGTTGGGATATACAATT+TGG | + | chr8_1:91854725-91854744 | None:intergenic | 30.0% | |
AAATTGTATATCCCAACAGA+TGG | - | chr8_1:91854724-91854743 | Msa1226110:intron | 30.0% | |
! | AGGCTAAAAGTCATCACTTT+TGG | - | chr8_1:91850520-91850539 | Msa1226110:CDS | 35.0% |
!! | TTTGATTTCGAGTCTTGTTG+GGG | + | chr8_1:91850697-91850716 | None:intergenic | 35.0% |
!! | GTTTGATTTCGAGTCTTGTT+GGG | + | chr8_1:91850698-91850717 | None:intergenic | 35.0% |
! | TGTTTGATTTCGAGTCTTGT+TGG | + | chr8_1:91850699-91850718 | None:intergenic | 35.0% |
AAAGAAAAAAGAGACGCAGA+AGG | - | chr8_1:91850863-91850882 | Msa1226110:intron | 35.0% | |
AAGAAAAAAGAGACGCAGAA+GGG | - | chr8_1:91850864-91850883 | Msa1226110:intron | 35.0% | |
CACTCATCCTCAATAAATGA+AGG | - | chr8_1:91850918-91850937 | Msa1226110:intron | 35.0% | |
GTCTCTTTACTTTACAACTC+AGG | - | chr8_1:91851067-91851086 | Msa1226110:intron | 35.0% | |
AGTACCCATTCTTTCATAAC+AGG | - | chr8_1:91851164-91851183 | Msa1226110:intron | 35.0% | |
GTACCCATTCTTTCATAACA+GGG | - | chr8_1:91851165-91851184 | Msa1226110:intron | 35.0% | |
TACCCATTCTTTCATAACAG+GGG | - | chr8_1:91851166-91851185 | Msa1226110:intron | 35.0% | |
AACTCAAAACTGATGAGTCA+TGG | + | chr8_1:91851195-91851214 | None:intergenic | 35.0% | |
ACTATGAGAAACTAGTGTGT+GGG | - | chr8_1:91851343-91851362 | Msa1226110:intron | 35.0% | |
ATTCACCCGTTCACAAAAAT+GGG | + | chr8_1:91851465-91851484 | None:intergenic | 35.0% | |
! | AATTTTCTGGATACGCGTTT+TGG | + | chr8_1:91851605-91851624 | None:intergenic | 35.0% |
! | TGGAAATATCCGGAATTTTC+TGG | + | chr8_1:91851618-91851637 | None:intergenic | 35.0% |
!! | ACAAAAAAACGGGTTACTTG+GGG | + | chr8_1:91851713-91851732 | None:intergenic | 35.0% |
! | TCCTTTTATAGGCAGAGTAT+AGG | + | chr8_1:91851747-91851766 | None:intergenic | 35.0% |
!! | ATTTGGTGTGAAGAATGAGT+GGG | + | chr8_1:91851778-91851797 | None:intergenic | 35.0% |
GAAACATCAACTGTGAGATT+TGG | + | chr8_1:91851795-91851814 | None:intergenic | 35.0% | |
ATTCGTTAACACAAATCGGA+GGG | + | chr8_1:91851838-91851857 | None:intergenic | 35.0% | |
AACGATTGAACCATACTTTG+AGG | - | chr8_1:91851971-91851990 | Msa1226110:intron | 35.0% | |
GAGAATTACACCTCAAAGTA+TGG | + | chr8_1:91851984-91852003 | None:intergenic | 35.0% | |
ATATACTCGAAACAGTGATC+TGG | - | chr8_1:91852026-91852045 | Msa1226110:intron | 35.0% | |
TATACTCGAAACAGTGATCT+GGG | - | chr8_1:91852027-91852046 | Msa1226110:intron | 35.0% | |
! | TTCTATCCACCTTTTGTTGA+TGG | + | chr8_1:91852282-91852301 | None:intergenic | 35.0% |
GACATGTATTATGAAACGGA+TGG | - | chr8_1:91852364-91852383 | Msa1226110:CDS | 35.0% | |
TGGCGTCTTCAAATCAATAT+TGG | + | chr8_1:91852758-91852777 | None:intergenic | 35.0% | |
GTTCTATAGAAGTAAACGCT+GGG | + | chr8_1:91852793-91852812 | None:intergenic | 35.0% | |
GAAGAATTTGGAAATGGTGT+TGG | + | chr8_1:91852815-91852834 | None:intergenic | 35.0% | |
GAGAGCTTTCTTCATAATCT+TGG | + | chr8_1:91852842-91852861 | None:intergenic | 35.0% | |
!! | TCGTTTTTGTTACGACAAAG+AGG | - | chr8_1:91852897-91852916 | Msa1226110:intron | 35.0% |
ATCTTATTAACTACTCGCTC+TGG | + | chr8_1:91853327-91853346 | None:intergenic | 35.0% | |
CATGAATTCCTCTCGAAAAT+GGG | + | chr8_1:91853420-91853439 | None:intergenic | 35.0% | |
!! | CATTTTCGAGAGGAATTCAT+GGG | - | chr8_1:91853419-91853438 | Msa1226110:intron | 35.0% |
TGTGTTGCGAGAAAATTATG+CGG | + | chr8_1:91853506-91853525 | None:intergenic | 35.0% | |
! | GTGCAATATTTTGTAGATGG+AGG | - | chr8_1:91854111-91854130 | Msa1226110:intron | 35.0% |
! | TATTTTGTAGATGGAGGAGA+TGG | - | chr8_1:91854117-91854136 | Msa1226110:intron | 35.0% |
CAGGTAACATACTTCAAATG+TGG | - | chr8_1:91854305-91854324 | Msa1226110:intron | 35.0% | |
GTAACATACTTCAAATGTGG+AGG | - | chr8_1:91854308-91854327 | Msa1226110:intron | 35.0% | |
AGTAGTGTCCGATCAATAAA+TGG | + | chr8_1:91854443-91854462 | None:intergenic | 35.0% | |
AAAGCTAAGTCCAAAGAAGT+TGG | - | chr8_1:91854607-91854626 | Msa1226110:intron | 35.0% | |
ATCTCATGTCAAAACCAACA+TGG | - | chr8_1:91854830-91854849 | Msa1226110:intron | 35.0% | |
AAATCTTGCGATCGTTAGTT+GGG | - | chr8_1:91854981-91855000 | Msa1226110:intron | 35.0% | |
CCAAAATCAGCATCATAGAT+TGG | + | chr8_1:91855015-91855034 | None:intergenic | 35.0% | |
!!! | CCAATCTATGATGCTGATTT+TGG | - | chr8_1:91855012-91855031 | Msa1226110:intron | 35.0% |
!!! | TCTATGATGCTGATTTTGGT+TGG | - | chr8_1:91855016-91855035 | Msa1226110:intron | 35.0% |
!!! | CTATGATGCTGATTTTGGTT+GGG | - | chr8_1:91855017-91855036 | Msa1226110:intron | 35.0% |
!!! | TATGATGCTGATTTTGGTTG+GGG | - | chr8_1:91855018-91855037 | Msa1226110:intron | 35.0% |
ATTCCAAGCTCAACAAATGA+TGG | - | chr8_1:91855093-91855112 | Msa1226110:intron | 35.0% | |
TTCCAAGCTCAACAAATGAT+GGG | - | chr8_1:91855094-91855113 | Msa1226110:intron | 35.0% | |
! | AAATGATGGGAGTTTATCTC+TGG | - | chr8_1:91855107-91855126 | Msa1226110:five_prime_UTR | 35.0% |
!! | CATGGAAGTGTTTAAGGAAT+TGG | - | chr8_1:91855152-91855171 | Msa1226110:five_prime_UTR | 35.0% |
ACTTGAGAAGATGATCGATG+GGG | + | chr8_1:91850254-91850273 | None:intergenic | 40.0% | |
GACTTGAGAAGATGATCGAT+GGG | + | chr8_1:91850255-91850274 | None:intergenic | 40.0% | |
AGACTTGAGAAGATGATCGA+TGG | + | chr8_1:91850256-91850275 | None:intergenic | 40.0% | |
AGAAAAAAGAGACGCAGAAG+GGG | - | chr8_1:91850865-91850884 | Msa1226110:intron | 40.0% | |
CACCCCTGTTATGAAAGAAT+GGG | + | chr8_1:91851171-91851190 | None:intergenic | 40.0% | |
ACACCCCTGTTATGAAAGAA+TGG | + | chr8_1:91851172-91851191 | None:intergenic | 40.0% | |
CACTATGAGAAACTAGTGTG+TGG | - | chr8_1:91851342-91851361 | Msa1226110:intron | 40.0% | |
CATTCACCCGTTCACAAAAA+TGG | + | chr8_1:91851466-91851485 | None:intergenic | 40.0% | |
AACGCGTATCCAGAAAATTC+CGG | - | chr8_1:91851606-91851625 | Msa1226110:intron | 40.0% | |
GCCTATACTCTGCCTATAAA+AGG | - | chr8_1:91851743-91851762 | Msa1226110:intron | 40.0% | |
! | TTTGGTGTGAAGAATGAGTG+GGG | + | chr8_1:91851777-91851796 | None:intergenic | 40.0% |
!! | GATTTGGTGTGAAGAATGAG+TGG | + | chr8_1:91851779-91851798 | None:intergenic | 40.0% |
GATTCGTTAACACAAATCGG+AGG | + | chr8_1:91851839-91851858 | None:intergenic | 40.0% | |
TAGAAGATGAAGAAACCGAC+GGG | + | chr8_1:91851888-91851907 | None:intergenic | 40.0% | |
GTAGAAGATGAAGAAACCGA+CGG | + | chr8_1:91851889-91851908 | None:intergenic | 40.0% | |
TAGTCTACCTTGCACAAACT+AGG | - | chr8_1:91852079-91852098 | Msa1226110:intron | 40.0% | |
AGTCTACCTTGCACAAACTA+GGG | - | chr8_1:91852080-91852099 | Msa1226110:intron | 40.0% | |
!! | GCTTTCTTTAAGACGTTTCG+CGG | + | chr8_1:91852111-91852130 | None:intergenic | 40.0% |
ACTCACCCAGTAATTTCGTT+CGG | - | chr8_1:91852143-91852162 | Msa1226110:intron | 40.0% | |
TGTTCACCCATCAAGAAAAG+TGG | + | chr8_1:91852475-91852494 | None:intergenic | 40.0% | |
GGTTCTATAGAAGTAAACGC+TGG | + | chr8_1:91852794-91852813 | None:intergenic | 40.0% | |
! | AATCTTGGCGTCGAAGAATT+TGG | + | chr8_1:91852827-91852846 | None:intergenic | 40.0% |
TATGAAGAAAGCTCTCAGCA+AGG | - | chr8_1:91852846-91852865 | Msa1226110:intron | 40.0% | |
GCTTGTCTCATTCTATCCAA+TGG | - | chr8_1:91852870-91852889 | Msa1226110:intron | 40.0% | |
TAACAAAAACGACCTGCCAT+TGG | + | chr8_1:91852889-91852908 | None:intergenic | 40.0% | |
AGTTTGCACAAGTGCAATGT+GGG | + | chr8_1:91853012-91853031 | None:intergenic | 40.0% | |
AAGTTTGCACAAGTGCAATG+TGG | + | chr8_1:91853013-91853032 | None:intergenic | 40.0% | |
TGAAACATACCTGCAACACT+AGG | + | chr8_1:91853080-91853099 | None:intergenic | 40.0% | |
!! | CATTATCTCCCATTTTCGAG+AGG | - | chr8_1:91853409-91853428 | Msa1226110:intron | 40.0% |
CCATGAATTCCTCTCGAAAA+TGG | + | chr8_1:91853421-91853440 | None:intergenic | 40.0% | |
!! | CCATTTTCGAGAGGAATTCA+TGG | - | chr8_1:91853418-91853437 | Msa1226110:intron | 40.0% |
GTGTTGCGAGAAAATTATGC+GGG | + | chr8_1:91853505-91853524 | None:intergenic | 40.0% | |
ATAAATTAGGACGAGTCCAG+TGG | + | chr8_1:91854065-91854084 | None:intergenic | 40.0% | |
ACTGGACTCGTCCTAATTTA+TGG | - | chr8_1:91854064-91854083 | Msa1226110:intron | 40.0% | |
!! | TAATTTATGGCGGATGGTGA+CGG | - | chr8_1:91854077-91854096 | Msa1226110:intron | 40.0% |
CGAACTTTAACTATTTGCGC+AGG | - | chr8_1:91854286-91854305 | Msa1226110:intron | 40.0% | |
CCATCCCACCATTTATTGAT+CGG | - | chr8_1:91854432-91854451 | Msa1226110:intron | 40.0% | |
GTGTCCGATCAATAAATGGT+GGG | + | chr8_1:91854439-91854458 | None:intergenic | 40.0% | |
AGTGTCCGATCAATAAATGG+TGG | + | chr8_1:91854440-91854459 | None:intergenic | 40.0% | |
!! | TGATCAAAAATGGGTTGTGG+TGG | + | chr8_1:91854478-91854497 | None:intergenic | 40.0% |
!! | ACGTGATCAAAAATGGGTTG+TGG | + | chr8_1:91854481-91854500 | None:intergenic | 40.0% |
TGTTGTGGAATCTTCATGGA+TGG | + | chr8_1:91854520-91854539 | None:intergenic | 40.0% | |
TTGTTACATTCTCTGAGCCA+GGG | + | chr8_1:91854546-91854565 | None:intergenic | 40.0% | |
GATTGTGTTGCCAACTTCTT+TGG | + | chr8_1:91854620-91854639 | None:intergenic | 40.0% | |
ACCACTTATGAGATGTTAGC+TGG | - | chr8_1:91854646-91854665 | Msa1226110:intron | 40.0% | |
ACCAGCTAACATCTCATAAG+TGG | + | chr8_1:91854650-91854669 | None:intergenic | 40.0% | |
AGATGTTAGCTGGTCATGTT+TGG | - | chr8_1:91854656-91854675 | Msa1226110:intron | 40.0% | |
ACCTTGATCTTCCATCTGTT+GGG | + | chr8_1:91854738-91854757 | None:intergenic | 40.0% | |
AACCTTGATCTTCCATCTGT+TGG | + | chr8_1:91854739-91854758 | None:intergenic | 40.0% | |
! | AGATCACTTGCTAGAGCTAT+AGG | + | chr8_1:91854814-91854833 | None:intergenic | 40.0% |
TCACAATGCATTGTTGCGAA+TGG | - | chr8_1:91854870-91854889 | Msa1226110:intron | 40.0% | |
GACACTTAACATTAGCGTTG+CGG | + | chr8_1:91854960-91854979 | None:intergenic | 40.0% | |
CAACTAACGATCGCAAGATT+TGG | + | chr8_1:91854982-91855001 | None:intergenic | 40.0% | |
CAAATCTTGCGATCGTTAGT+TGG | - | chr8_1:91854980-91854999 | Msa1226110:intron | 40.0% | |
TTCTCTTCAACATGAGCACA+TGG | - | chr8_1:91855134-91855153 | Msa1226110:five_prime_UTR | 40.0% | |
!! | TGAGCACATGGAAGTGTTTA+AGG | - | chr8_1:91855146-91855165 | Msa1226110:five_prime_UTR | 40.0% |
CTTCTCAAGTCTCAACCTCA+AGG | - | chr8_1:91850264-91850283 | Msa1226110:CDS | 45.0% | |
!! | AACATGGTGTCGTTACCTTG+AGG | + | chr8_1:91850282-91850301 | None:intergenic | 45.0% |
CATCATCTTGTGCGATTGTG+CGG | + | chr8_1:91850752-91850771 | None:intergenic | 45.0% | |
CGTGATTTCGTTGTCTTGTG+CGG | + | chr8_1:91850786-91850805 | None:intergenic | 45.0% | |
CACAAAAATGGGTACCCCAA+GGG | + | chr8_1:91851454-91851473 | None:intergenic | 45.0% | |
TCACAAAAATGGGTACCCCA+AGG | + | chr8_1:91851455-91851474 | None:intergenic | 45.0% | |
!! | GGGGTACCCATTTTTGTGAA+CGG | - | chr8_1:91851456-91851475 | Msa1226110:intron | 45.0% |
!! | GGGTACCCATTTTTGTGAAC+GGG | - | chr8_1:91851457-91851476 | Msa1226110:intron | 45.0% |
TTTAATCCAAGACCCAAGCC+CGG | + | chr8_1:91851533-91851552 | None:intergenic | 45.0% | |
! | ACGCGTTTTACGCGTAACTT+GGG | + | chr8_1:91851664-91851683 | None:intergenic | 45.0% |
! | AACGCGTTTTACGCGTAACT+TGG | + | chr8_1:91851665-91851684 | None:intergenic | 45.0% |
GCGTAAAACGCGTTTGCTTA+AGG | - | chr8_1:91851671-91851690 | Msa1226110:intron | 45.0% | |
! | CACAGTTGATGTTTCCTGTG+CGG | - | chr8_1:91851800-91851819 | Msa1226110:intron | 45.0% |
TTGATCGAAGCCACTCGATA+CGG | + | chr8_1:91851952-91851971 | None:intergenic | 45.0% | |
!! | TGATCTGGGCTGTTTTATCC+TGG | - | chr8_1:91852041-91852060 | Msa1226110:intron | 45.0% |
ACGTCTTAAAGAAAGCGACC+TGG | - | chr8_1:91852115-91852134 | Msa1226110:intron | 45.0% | |
TAAGATGGTGCAACCATCAG+AGG | - | chr8_1:91852705-91852724 | Msa1226110:exon | 45.0% | |
! | GGCGTCGAAGAATTTGGAAA+TGG | + | chr8_1:91852821-91852840 | None:intergenic | 45.0% |
GTCTCATTCTATCCAATGGC+AGG | - | chr8_1:91852874-91852893 | Msa1226110:intron | 45.0% | |
CCGTGCGAGTAATCAACAAT+GGG | + | chr8_1:91853039-91853058 | None:intergenic | 45.0% | |
! | CCCATTGTTGATTACTCGCA+CGG | - | chr8_1:91853036-91853055 | Msa1226110:intron | 45.0% |
TCCGTGCGAGTAATCAACAA+TGG | + | chr8_1:91853040-91853059 | None:intergenic | 45.0% | |
GTTGATTACTCGCACGGAAT+TGG | - | chr8_1:91853042-91853061 | Msa1226110:intron | 45.0% | |
ACATACCTGCAACACTAGGA+GGG | + | chr8_1:91853076-91853095 | None:intergenic | 45.0% | |
AACATACCTGCAACACTAGG+AGG | + | chr8_1:91853077-91853096 | None:intergenic | 45.0% | |
GACAAAGAGAGATGGTGTTC+CGG | + | chr8_1:91854038-91854057 | None:intergenic | 45.0% | |
GGACTCGTCCTAATTTATGG+CGG | - | chr8_1:91854067-91854086 | Msa1226110:intron | 45.0% | |
! | TCGTCCTAATTTATGGCGGA+TGG | - | chr8_1:91854071-91854090 | Msa1226110:intron | 45.0% |
GTCACCATCCGCCATAAATT+AGG | + | chr8_1:91854078-91854097 | None:intergenic | 45.0% | |
AAATGTGGAGGAGTCTCACT+AGG | - | chr8_1:91854320-91854339 | Msa1226110:intron | 45.0% | |
TGGGATGCACCATTATCTAG+CGG | - | chr8_1:91854346-91854365 | Msa1226110:intron | 45.0% | |
ATGCACCATTATCTAGCGGA+TGG | - | chr8_1:91854350-91854369 | Msa1226110:intron | 45.0% | |
AAGCTCCATCCGCTAGATAA+TGG | + | chr8_1:91854358-91854377 | None:intergenic | 45.0% | |
ACATGGTCAGATGTAACTCG+CGG | - | chr8_1:91854398-91854417 | Msa1226110:intron | 45.0% | |
! | CCGATCAATAAATGGTGGGA+TGG | + | chr8_1:91854435-91854454 | None:intergenic | 45.0% |
!! | AAATGGGTTGTGGTGGATCA+CGG | + | chr8_1:91854471-91854490 | None:intergenic | 45.0% |
TGTTACATTCTCTGAGCCAG+GGG | + | chr8_1:91854545-91854564 | None:intergenic | 45.0% | |
CTTGTTACATTCTCTGAGCC+AGG | + | chr8_1:91854547-91854566 | None:intergenic | 45.0% | |
TCCCAACAGATGGAAGATCA+AGG | - | chr8_1:91854734-91854753 | Msa1226110:intron | 45.0% | |
! | ACTTGCTAGAGCTATAGGTG+CGG | + | chr8_1:91854809-91854828 | None:intergenic | 45.0% |
CTGCTTACAGCATACCATGT+TGG | + | chr8_1:91854847-91854866 | None:intergenic | 45.0% | |
!!! | ATGCTGATTTTGGTTGGGGA+AGG | - | chr8_1:91855022-91855041 | Msa1226110:intron | 45.0% |
! | TTGGGGAAGGCCAATTTTCA+TGG | - | chr8_1:91855035-91855054 | Msa1226110:intron | 45.0% |
! | TGGGGAAGGCCAATTTTCAT+GGG | - | chr8_1:91855036-91855055 | Msa1226110:intron | 45.0% |
! | CTCCCATCATTTGTTGAGCT+TGG | + | chr8_1:91855099-91855118 | None:intergenic | 45.0% |
!! | TATATATATATATATATAGA+TGG | + | chr8_1:91853767-91853786 | None:intergenic | 5.0% |
TGAGAAGATGATCGATGGGG+AGG | + | chr8_1:91850251-91850270 | None:intergenic | 50.0% | |
! | CGCGTTTTACGCGTAACTTG+GGG | + | chr8_1:91851663-91851682 | None:intergenic | 50.0% |
TCTACTCCTTTCTGTCCCGT+CGG | - | chr8_1:91851870-91851889 | Msa1226110:intron | 50.0% | |
AAGAAACCGACGGGACAGAA+AGG | + | chr8_1:91851879-91851898 | None:intergenic | 50.0% | |
TCTACTCCTTTCTGTCCCGT+CGG | - | chr8_1:91851870-91851889 | Msa1226110:intron | 50.0% | |
ACCGCTCTATTCGAAACCGA+CGG | + | chr8_1:91851923-91851942 | None:intergenic | 50.0% | |
!! | GGGCTGTTTTATCCTGGAGA+CGG | - | chr8_1:91852047-91852066 | Msa1226110:intron | 50.0% |
! | GCACTACCCTAGTTTGTGCA+AGG | + | chr8_1:91852089-91852108 | None:intergenic | 50.0% |
TTACGACAAAGAGGACCGAG+TGG | - | chr8_1:91852906-91852925 | Msa1226110:intron | 50.0% | |
AGATTGACTGCGACGGTCAA+GGG | - | chr8_1:91852929-91852948 | Msa1226110:intron | 50.0% | |
CATACCTGCAACACTAGGAG+GGG | + | chr8_1:91853075-91853094 | None:intergenic | 50.0% | |
GTGGAGGAGACAAAGAGAGA+TGG | + | chr8_1:91854046-91854065 | None:intergenic | 50.0% | |
TCTCTCTTTGTCTCCTCCAC+TGG | - | chr8_1:91854046-91854065 | Msa1226110:intron | 50.0% | |
AATTAGGACGAGTCCAGTGG+AGG | + | chr8_1:91854062-91854081 | None:intergenic | 50.0% | |
!! | GATGGTGACGGTTGTGATGA+TGG | - | chr8_1:91854089-91854108 | Msa1226110:intron | 50.0% |
GAGGAGTCTCACTAGGTGTT+GGG | - | chr8_1:91854327-91854346 | Msa1226110:intron | 50.0% | |
! | TATCTAGCGGATGGAGCTTC+TGG | - | chr8_1:91854359-91854378 | Msa1226110:intron | 50.0% |
!! | AATGGGTTGTGGTGGATCAC+GGG | + | chr8_1:91854470-91854489 | None:intergenic | 50.0% |
GGGCTGTTGTGGAATCTTCA+TGG | + | chr8_1:91854524-91854543 | None:intergenic | 50.0% | |
GTTACATTCTCTGAGCCAGG+GGG | + | chr8_1:91854544-91854563 | None:intergenic | 50.0% | |
GTTGCAACCTCCACTTCCAT+CGG | - | chr8_1:91854756-91854775 | Msa1226110:intron | 50.0% | |
TTGCAACCTCCACTTCCATC+GGG | - | chr8_1:91854757-91854776 | Msa1226110:intron | 50.0% | |
AAGTAACCCGATGGAAGTGG+AGG | + | chr8_1:91854766-91854785 | None:intergenic | 50.0% | |
CCACTTCCATCGGGTTACTT+CGG | - | chr8_1:91854766-91854785 | Msa1226110:intron | 50.0% | |
ACATTGCCGAAGTAACCCGA+TGG | + | chr8_1:91854775-91854794 | None:intergenic | 50.0% | |
! | AGGCCAATTTTCATGGGACC+TGG | - | chr8_1:91855042-91855061 | Msa1226110:intron | 50.0% |
! | GGCCAATTTTCATGGGACCT+GGG | - | chr8_1:91855043-91855062 | Msa1226110:intron | 50.0% |
! | GCCAATTTTCATGGGACCTG+GGG | - | chr8_1:91855044-91855063 | Msa1226110:intron | 50.0% |
GACGCAGAAGGGGTGAATGT+AGG | - | chr8_1:91850875-91850894 | Msa1226110:intron | 55.0% | |
! | GGGGCGAGCTCTCCTTTTAT+AGG | + | chr8_1:91851758-91851777 | None:intergenic | 55.0% |
GGAGAAGAGAGAAACCGCAC+AGG | + | chr8_1:91851817-91851836 | None:intergenic | 55.0% | |
TCGAAACCGACGGGACAGAA+AGG | + | chr8_1:91851913-91851932 | None:intergenic | 55.0% | |
CCGCTCTATTCGAAACCGAC+GGG | + | chr8_1:91851922-91851941 | None:intergenic | 55.0% | |
!! | CCCGTCGGTTTCGAATAGAG+CGG | - | chr8_1:91851919-91851938 | Msa1226110:intron | 55.0% |
CGGTTACGTACCGTATCGAG+TGG | - | chr8_1:91851939-91851958 | Msa1226110:intron | 55.0% | |
! | GTTTTATCCTGGAGACGGCG+TGG | - | chr8_1:91852052-91852071 | Msa1226110:intron | 55.0% |
TTACTGGGTGAGTCACGACC+AGG | + | chr8_1:91852136-91852155 | None:intergenic | 55.0% | |
GATGGTGCAACCATCAGAGG+AGG | - | chr8_1:91852708-91852727 | Msa1226110:five_prime_UTR | 55.0% | |
TGTCGTGCAACCTCCTCTGA+TGG | + | chr8_1:91852721-91852740 | None:intergenic | 55.0% | |
AGAGGAGGTTGCACGACAGA+GGG | - | chr8_1:91852723-91852742 | Msa1226110:intron | 55.0% | |
CGTCGCAGTCAATCTCCACT+CGG | + | chr8_1:91852924-91852943 | None:intergenic | 55.0% | |
CGAGTGGAGATTGACTGCGA+CGG | - | chr8_1:91852922-91852941 | Msa1226110:intron | 55.0% | |
GAGATTGACTGCGACGGTCA+AGG | - | chr8_1:91852928-91852947 | Msa1226110:intron | 55.0% | |
GATTGACTGCGACGGTCAAG+GGG | - | chr8_1:91852930-91852949 | Msa1226110:intron | 55.0% | |
GTATCCCCTCCTAGTGTTGC+AGG | - | chr8_1:91853068-91853087 | Msa1226110:intron | 55.0% | |
GGTATCTCGCAGCAGAGATG+AGG | + | chr8_1:91854012-91854031 | None:intergenic | 55.0% | |
TCTGCTGCGAGATACCTCAC+CGG | - | chr8_1:91854016-91854035 | Msa1226110:intron | 55.0% | |
AGAGAGATGGTGTTCCGGTG+AGG | + | chr8_1:91854033-91854052 | None:intergenic | 55.0% | |
GGAGGAGTCTCACTAGGTGT+TGG | - | chr8_1:91854326-91854345 | Msa1226110:intron | 55.0% | |
AAGATTCCACAACAGCCCCC+TGG | - | chr8_1:91854526-91854545 | Msa1226110:intron | 55.0% | |
CCGAAGTAACCCGATGGAAG+TGG | + | chr8_1:91854769-91854788 | None:intergenic | 55.0% | |
GCCCCAGGTCCCATGAAAAT+TGG | + | chr8_1:91855048-91855067 | None:intergenic | 55.0% | |
AGTCCATCACAATCAGCCCC+AGG | + | chr8_1:91855063-91855082 | None:intergenic | 55.0% | |
TGATCGATGGGGAGGAGCAG+AGG | + | chr8_1:91850243-91850262 | None:intergenic | 60.0% | |
TAAGGGTGGGGTGACCTCCA+AGG | - | chr8_1:91851423-91851442 | Msa1226110:intron | 60.0% | |
AAGGGTGGGGTGACCTCCAA+GGG | - | chr8_1:91851424-91851443 | Msa1226110:intron | 60.0% | |
! | ACCTCCAAGGGTGTGCCCTT+GGG | - | chr8_1:91851436-91851455 | Msa1226110:intron | 60.0% |
CTAACAACCACGCCGTCTCC+AGG | + | chr8_1:91852062-91852081 | None:intergenic | 60.0% | |
CAGAGGAGGTTGCACGACAG+AGG | - | chr8_1:91852722-91852741 | Msa1226110:intron | 60.0% | |
AGGTTGCACGACAGAGGGTG+TGG | - | chr8_1:91852728-91852747 | Msa1226110:intron | 60.0% | |
ACGCTGGGCGTGTGCACATT+TGG | + | chr8_1:91852778-91852797 | None:intergenic | 60.0% | |
GGACCTGGGGCTGATTGTGA+TGG | - | chr8_1:91855057-91855076 | Msa1226110:intron | 60.0% | |
! | GACCTCCAAGGGTGTGCCCT+TGG | - | chr8_1:91851435-91851454 | Msa1226110:intron | 65.0% |
! | CCTCCAAGGGTGTGCCCTTG+GGG | - | chr8_1:91851437-91851456 | Msa1226110:intron | 65.0% |
! | GTACCCCAAGGGCACACCCT+TGG | + | chr8_1:91851443-91851462 | None:intergenic | 65.0% |
TCTGAGCCAGGGGGCTGTTG+TGG | + | chr8_1:91854535-91854554 | None:intergenic | 65.0% | |
! | CCCCAAGGGCACACCCTTGG+AGG | + | chr8_1:91851440-91851459 | None:intergenic | 70.0% |
ATCACGCGCGACGACGACGC+CGG | - | chr8_1:91851502-91851521 | Msa1226110:intron | 70.0% | |
TCCAAGACCCAAGCCCGGCC+CGG | + | chr8_1:91851528-91851547 | None:intergenic | 70.0% | |
! | AGACCCAAGCCCGGCCCGGC+CGG | + | chr8_1:91851524-91851543 | None:intergenic | 80.0% |
! | GCCGGGCCGGGCTTGGGTCT+TGG | - | chr8_1:91851524-91851543 | Msa1226110:intron | 80.0% |
! | CGCGCGACGACGACGCCGGC+CGG | - | chr8_1:91851506-91851525 | Msa1226110:intron | 85.0% |
! | GCGCGACGACGACGCCGGCC+GGG | - | chr8_1:91851507-91851526 | Msa1226110:intron | 85.0% |
! | GACGACGACGCCGGCCGGGC+CGG | - | chr8_1:91851511-91851530 | Msa1226110:intron | 85.0% |
! | ACGACGACGCCGGCCGGGCC+GGG | - | chr8_1:91851512-91851531 | Msa1226110:intron | 85.0% |
! | ACGCCGGCCGGGCCGGGCTT+GGG | - | chr8_1:91851518-91851537 | Msa1226110:intron | 85.0% |
! | GACGCCGGCCGGGCCGGGCT+TGG | - | chr8_1:91851517-91851536 | Msa1226110:intron | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 91850201 | 91855188 | 91850201 | ID=Msa1226110;Name=Msa1226110 |
chr8_1 | mRNA | 91850201 | 91855188 | 91850201 | ID=Msa1226110-mRNA-1;Parent=Msa1226110;Name=Msa1226110-mRNA-1;_AED=0.30;_eAED=0.30;_QI=105|0.66|0.5|1|0.66|0.5|4|0|389 |
chr8_1 | exon | 91850201 | 91850860 | 91850201 | ID=Msa1226110-mRNA-1:exon:33497;Parent=Msa1226110-mRNA-1 |
chr8_1 | exon | 91850980 | 91851081 | 91850980 | ID=Msa1226110-mRNA-1:exon:33496;Parent=Msa1226110-mRNA-1 |
chr8_1 | exon | 91852300 | 91852727 | 91852300 | ID=Msa1226110-mRNA-1:exon:33495;Parent=Msa1226110-mRNA-1 |
chr8_1 | exon | 91855104 | 91855188 | 91855104 | ID=Msa1226110-mRNA-1:exon:33494;Parent=Msa1226110-mRNA-1 |
chr8_1 | five_prime_UTR | 91855104 | 91855188 | 91855104 | ID=Msa1226110-mRNA-1:five_prime_utr;Parent=Msa1226110-mRNA-1 |
chr8_1 | five_prime_UTR | 91852708 | 91852727 | 91852708 | ID=Msa1226110-mRNA-1:five_prime_utr;Parent=Msa1226110-mRNA-1 |
chr8_1 | CDS | 91852300 | 91852707 | 91852300 | ID=Msa1226110-mRNA-1:cds;Parent=Msa1226110-mRNA-1 |
chr8_1 | CDS | 91850980 | 91851081 | 91850980 | ID=Msa1226110-mRNA-1:cds;Parent=Msa1226110-mRNA-1 |
chr8_1 | CDS | 91850201 | 91850860 | 91850201 | ID=Msa1226110-mRNA-1:cds;Parent=Msa1226110-mRNA-1 |
Gene Sequence |
Protein sequence |