Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143380 | XP_003629600.2 | 94.700 | 434 | 23 | 0 | 1 | 434 | 1 | 434 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143380 | sp|Q9LIS1|CR26L_ARATH | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 9.81e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143380 | A0A396GN49 | 94.700 | 434 | 23 | 0 | 1 | 434 | 1 | 434 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617650 | Msa1143380 | 0.994295 | 4.271179e-206 | -8.615850e-47 |
| Msa0648180 | Msa1143380 | 0.805954 | 1.040220e-49 | -8.615850e-47 |
| Msa0656950 | Msa1143380 | 0.962628 | 4.185141e-121 | -8.615850e-47 |
| Msa0700610 | Msa1143380 | 0.960090 | 3.635452e-118 | -8.615850e-47 |
| Msa0700850 | Msa1143380 | 0.841802 | 3.810358e-58 | -8.615850e-47 |
| Msa0713590 | Msa1143380 | 0.800969 | 1.123161e-48 | -8.615850e-47 |
| Msa0749130 | Msa1143380 | 0.803186 | 3.931814e-49 | -8.615850e-47 |
| Msa0184070 | Msa1143380 | 0.817145 | 3.837438e-52 | -8.615850e-47 |
| Msa0224700 | Msa1143380 | 0.801094 | 1.058716e-48 | -8.615850e-47 |
| Msa1122920 | Msa1143380 | 0.802185 | 6.325181e-49 | -8.615850e-47 |
| Msa1129150 | Msa1143380 | 0.837738 | 4.353997e-57 | -8.615850e-47 |
| Msa1129440 | Msa1143380 | 0.808822 | 2.564005e-50 | -8.615850e-47 |
| Msa1129920 | Msa1143380 | 0.812610 | 3.888345e-51 | -8.615850e-47 |
| Msa1143380 | Msa1178470 | 0.835942 | 1.250820e-56 | -8.615850e-47 |
| Msa1143380 | Msa1201710 | 0.817630 | 2.985191e-52 | -8.615850e-47 |
| Msa1143380 | Msa1214730 | 0.848935 | 4.462117e-60 | -8.615850e-47 |
| Msa1143380 | Msa1214870 | 0.839493 | 1.533008e-57 | -8.615850e-47 |
| Msa1143380 | Msa1226110 | 0.801238 | 9.892949e-49 | -8.615850e-47 |
| Msa1143380 | Msa1294730 | 0.827176 | 1.807623e-54 | -8.615850e-47 |
| Msa1143380 | Msa1300850 | 0.840693 | 7.458174e-58 | -8.615850e-47 |
| Msa1143380 | Msa1369860 | 0.803937 | 2.746609e-49 | -8.615850e-47 |
| Msa0485910 | Msa1143380 | 0.807993 | 3.852848e-50 | -8.615850e-47 |
| Msa0514280 | Msa1143380 | 0.823702 | 1.201576e-53 | -8.615850e-47 |
| Msa0554420 | Msa1143380 | 0.804201 | 2.419989e-49 | -8.615850e-47 |
| Msa0564150 | Msa1143380 | 0.973877 | 3.532093e-137 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143380 | MtrunA17_Chr8g0378151 | 94.700 | 434 | 23 | 0 | 1 | 434 | 1 | 434 | 0.0 | 853 |
| Msa1143380 | MtrunA17_Chr2g0298091 | 41.429 | 420 | 227 | 8 | 16 | 423 | 16 | 428 | 3.40e-99 | 303 |
| Msa1143380 | MtrunA17_Chr3g0132831 | 38.278 | 418 | 244 | 8 | 16 | 423 | 15 | 428 | 2.33e-94 | 291 |
| Msa1143380 | MtrunA17_Chr1g0163441 | 37.198 | 414 | 242 | 7 | 30 | 431 | 32 | 439 | 5.49e-89 | 277 |
| Msa1143380 | MtrunA17_Chr1g0148851 | 24.876 | 402 | 283 | 9 | 37 | 419 | 30 | 431 | 8.20e-28 | 114 |
| Msa1143380 | MtrunA17_Chr7g0274021 | 24.888 | 446 | 290 | 13 | 6 | 419 | 5 | 437 | 1.08e-27 | 114 |
| Msa1143380 | MtrunA17_Chr4g0001861 | 30.964 | 197 | 116 | 3 | 1 | 196 | 10 | 187 | 1.79e-17 | 84.3 |
| Msa1143380 | MtrunA17_Chr2g0334001 | 31.034 | 203 | 108 | 7 | 1 | 196 | 10 | 187 | 3.80e-16 | 80.1 |
| Msa1143380 | MtrunA17_Chr7g0224391 | 30.726 | 179 | 121 | 2 | 20 | 196 | 24 | 201 | 2.37e-15 | 77.8 |
| Msa1143380 | MtrunA17_Chr8g0386141 | 31.169 | 154 | 103 | 2 | 46 | 196 | 39 | 192 | 7.22e-15 | 76.3 |
| Msa1143380 | MtrunA17_Chr3g0087401 | 25.954 | 262 | 169 | 7 | 37 | 278 | 26 | 282 | 2.79e-14 | 74.3 |
| Msa1143380 | MtrunA17_Chr7g0273791 | 30.075 | 133 | 91 | 1 | 49 | 179 | 49 | 181 | 2.65e-13 | 71.6 |
| Msa1143380 | MtrunA17_Chr8g0371821 | 24.000 | 250 | 178 | 5 | 43 | 284 | 34 | 279 | 6.43e-13 | 70.1 |
| Msa1143380 | MtrunA17_Chr4g0004691 | 30.882 | 136 | 87 | 3 | 61 | 190 | 49 | 183 | 3.68e-12 | 65.1 |
| Msa1143380 | MtrunA17_Chr3g0132001 | 30.519 | 154 | 104 | 2 | 46 | 196 | 46 | 199 | 4.48e-12 | 67.8 |
| Msa1143380 | MtrunA17_Chr7g0273721 | 32.374 | 139 | 88 | 4 | 46 | 179 | 45 | 182 | 3.20e-11 | 65.1 |
| Msa1143380 | MtrunA17_Chr7g0273761 | 28.358 | 134 | 93 | 2 | 49 | 179 | 421 | 554 | 5.12e-11 | 65.1 |
| Msa1143380 | MtrunA17_Chr5g0433641 | 30.827 | 133 | 90 | 1 | 49 | 179 | 49 | 181 | 6.03e-11 | 64.3 |
| Msa1143380 | MtrunA17_Chr8g0376901 | 21.300 | 446 | 283 | 17 | 19 | 425 | 10 | 426 | 8.14e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1143380 | AT3G23840.1 | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 9.97e-107 | 322 |
| Msa1143380 | AT4G13840.1 | 39.019 | 428 | 250 | 6 | 5 | 429 | 7 | 426 | 4.12e-105 | 318 |
| Msa1143380 | AT4G24510.1 | 34.192 | 427 | 250 | 11 | 12 | 423 | 6 | 416 | 1.92e-83 | 262 |
| Msa1143380 | AT2G19070.1 | 26.634 | 413 | 249 | 19 | 38 | 407 | 29 | 430 | 4.18e-18 | 86.7 |
| Msa1143380 | AT4G29250.1 | 24.091 | 440 | 268 | 17 | 19 | 419 | 27 | 439 | 1.53e-17 | 85.1 |
| Msa1143380 | AT5G48930.1 | 24.291 | 247 | 178 | 4 | 35 | 274 | 25 | 269 | 2.69e-14 | 74.7 |
| Msa1143380 | AT5G41040.1 | 33.962 | 159 | 99 | 3 | 46 | 201 | 65 | 220 | 3.65e-14 | 74.7 |
| Msa1143380 | AT5G41040.2 | 33.962 | 159 | 99 | 3 | 46 | 201 | 49 | 204 | 3.69e-14 | 74.3 |
| Msa1143380 | AT5G63560.1 | 30.636 | 173 | 104 | 5 | 43 | 199 | 27 | 199 | 1.64e-13 | 72.4 |
| Msa1143380 | AT3G48720.1 | 30.323 | 155 | 104 | 3 | 46 | 196 | 41 | 195 | 2.80e-13 | 71.6 |
| Msa1143380 | AT5G57840.1 | 25.101 | 247 | 179 | 3 | 35 | 275 | 25 | 271 | 4.58e-13 | 71.2 |
| Msa1143380 | AT1G65450.1 | 27.049 | 244 | 167 | 6 | 46 | 278 | 51 | 294 | 5.07e-12 | 67.8 |
Find 142 sgRNAs with CRISPR-Local
Find 437 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTAGTTGATTGTAAATT+TGG | 0.111021 | 7_4:-18890178 | Msa1143380:three_prime_UTR |
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 7_4:-18890836 | Msa1143380:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 7_4:-18890616 | Msa1143380:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 7_4:-18890975 | Msa1143380:CDS |
| CCTTAGCTGGGCCCATGTTA+TGG | 0.166786 | 7_4:-18891090 | Msa1143380:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 7_4:-18890782 | Msa1143380:CDS |
| CTTAGCTGGGCCCATGTTAT+GGG | 0.193486 | 7_4:-18891089 | Msa1143380:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 7_4:-18891052 | Msa1143380:CDS |
| CCTCATTAACGGTGTGTTTA+TGG | 0.210576 | 7_4:-18890153 | Msa1143380:three_prime_UTR |
| GGATTTCATTGGGCCTTAGC+TGG | 0.223582 | 7_4:-18891103 | Msa1143380:CDS |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 7_4:+18890844 | None:intergenic |
| TGTTAGTTGATTGTAAATTT+GGG | 0.292985 | 7_4:-18890177 | Msa1143380:three_prime_UTR |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 7_4:-18891051 | Msa1143380:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 7_4:-18890691 | Msa1143380:CDS |
| AAGCTTAATAACCACTAGTA+TGG | 0.301349 | 7_4:-18897139 | Msa1143380:exon |
| TCATCCCTTGCGGCCGATTC+CGG | 0.304819 | 7_4:-18896891 | Msa1143380:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 7_4:-18890568 | Msa1143380:CDS |
| ATATCATTGCCCCTACCATT+AGG | 0.319594 | 7_4:+18890696 | None:intergenic |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 7_4:+18890845 | None:intergenic |
| AAGCCATTCATCTAGAGTTT+TGG | 0.331771 | 7_4:+18896798 | None:intergenic |
| CTCGTTTCTCAACAAGTCAT+TGG | 0.333685 | 7_4:-18896745 | Msa1143380:CDS |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 7_4:-18890463 | Msa1143380:CDS |
| TTTAAGATAGTGAAGTTTCA+TGG | 0.343891 | 7_4:+18897002 | None:intergenic |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 7_4:-18890400 | Msa1143380:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 7_4:+18890338 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 7_4:-18890920 | Msa1143380:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 7_4:-18890835 | Msa1143380:CDS |
| TTAAAGAACCTGCAACAAAA+TGG | 0.359088 | 7_4:+18896699 | None:intergenic |
| TATCATTGCCCCTACCATTA+GGG | 0.360008 | 7_4:+18890697 | None:intergenic |
| CGATTCCGGCGATCGGAATC+TGG | 0.360082 | 7_4:-18896877 | Msa1143380:CDS |
| GAAGGAGAAAATGATAATTC+TGG | 0.360908 | 7_4:+18896721 | None:intergenic |
| AGTGTGTAGTAAACAAATCT+TGG | 0.364561 | 7_4:+18890432 | None:intergenic |
| TTGAGAAACGAGCAACTTGT+AGG | 0.365130 | 7_4:+18896756 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 7_4:+18890731 | None:intergenic |
| GTTGGGCCAGGTCATGCCAC+TGG | 0.366990 | 7_4:-18897063 | Msa1143380:CDS |
| AAGTGTGGTGGGATTTCATT+GGG | 0.369203 | 7_4:-18891113 | Msa1143380:CDS |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 7_4:-18890944 | Msa1143380:CDS |
| TTGAAAGATACAAGAGGCTT+TGG | 0.372426 | 7_4:+18897184 | None:intergenic |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 7_4:+18890497 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 7_4:+18890984 | None:intergenic |
| TTTGGTGCAATTGGCCTCAA+TGG | 0.403810 | 7_4:+18896816 | None:intergenic |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 7_4:-18890426 | Msa1143380:CDS |
| AGATGAATGGCTTGCTATGA+TGG | 0.415307 | 7_4:-18896788 | Msa1143380:CDS |
| TAAATTTGGGGCCTCATTAA+CGG | 0.417528 | 7_4:-18890164 | Msa1143380:three_prime_UTR |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 7_4:-18890462 | Msa1143380:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 7_4:+18890748 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 7_4:+18890725 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.427066 | 7_4:-18890690 | Msa1143380:CDS |
| GATTTCATTGGGCCTTAGCT+GGG | 0.427691 | 7_4:-18891102 | Msa1143380:CDS |
| CAGATTCCGATCGCCGGAAT+CGG | 0.429202 | 7_4:+18896878 | None:intergenic |
| GGTTATTAAGCTTATAAGAA+AGG | 0.429802 | 7_4:+18897149 | None:intergenic |
| TATATTGCCAGAAGATGAAA+TGG | 0.440744 | 7_4:-18890334 | Msa1143380:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 7_4:+18890789 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 7_4:+18890793 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 7_4:+18890726 | None:intergenic |
| TCGTTTCTCAACAAGTCATT+GGG | 0.447263 | 7_4:-18896744 | Msa1143380:CDS |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 7_4:-18890943 | Msa1143380:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 7_4:-18890372 | Msa1143380:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 7_4:+18890749 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 7_4:+18890661 | None:intergenic |
| TAAGTGTGGTGGGATTTCAT+TGG | 0.465833 | 7_4:-18891114 | Msa1143380:CDS |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 7_4:-18890594 | Msa1143380:CDS |
| AAGGTCTCTTTCTCTTCTTG+TGG | 0.466828 | 7_4:+18897111 | None:intergenic |
| TTAGCTGGGCCCATGTTATG+GGG | 0.467497 | 7_4:-18891088 | Msa1143380:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 7_4:-18890303 | Msa1143380:CDS |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 7_4:-18890411 | Msa1143380:CDS |
| AGGTCTCTTTCTCTTCTTGT+GGG | 0.470309 | 7_4:+18897112 | None:intergenic |
| GTGTGTAGTAAACAAATCTT+GGG | 0.472684 | 7_4:+18890433 | None:intergenic |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 7_4:+18890372 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 7_4:+18890915 | None:intergenic |
| ATGGCCAGGTCCAAACCGTT+CGG | 0.477197 | 7_4:+18897021 | None:intergenic |
| GATAGTGAAGTTTCATGGCC+AGG | 0.479627 | 7_4:+18897007 | None:intergenic |
| GAAACTTCACTATCTTAAAG+TGG | 0.479693 | 7_4:-18896998 | Msa1143380:CDS |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 7_4:+18890995 | None:intergenic |
| AACAATTAAGAAAATAAAAG+AGG | 0.487357 | 7_4:-18896941 | Msa1143380:CDS |
| ATTTGAGAGTATCTTCAGTT+GGG | 0.488025 | 7_4:-18897080 | Msa1143380:CDS |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 7_4:+18890810 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 7_4:-18890934 | Msa1143380:CDS |
| GTTTGTCGACCCGACCCTAA+TGG | 0.497568 | 7_4:-18890711 | Msa1143380:CDS |
| CCATAACATGGGCCCAGCTA+AGG | 0.499246 | 7_4:+18891090 | None:intergenic |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 7_4:+18890939 | None:intergenic |
| AATGGCTTGCTATGATGGAT+TGG | 0.507896 | 7_4:-18896783 | Msa1143380:CDS |
| TTGCGGCCGATTCCGGCGAT+CGG | 0.508580 | 7_4:-18896884 | Msa1143380:CDS |
| GCACCAAAACTCTAGATGAA+TGG | 0.514485 | 7_4:-18896801 | Msa1143380:CDS |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 7_4:-18890657 | Msa1143380:CDS |
| AGAGTATCTTCAGTTGGGCC+AGG | 0.515864 | 7_4:-18897075 | Msa1143380:CDS |
| CAATCCGAACGGTTTGGACC+TGG | 0.517626 | 7_4:-18897025 | Msa1143380:CDS |
| TCCGACCCAGTGGCATGACC+TGG | 0.523816 | 7_4:+18897057 | None:intergenic |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 7_4:+18890792 | None:intergenic |
| GTCGACCAGATTCCGATCGC+CGG | 0.538465 | 7_4:+18896872 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 7_4:-18890420 | Msa1143380:CDS |
| TTAACGGTGTGTTTATGGCA+TGG | 0.540258 | 7_4:-18890148 | Msa1143380:three_prime_UTR |
| TCGACCCGACCCTAATGGTA+GGG | 0.545566 | 7_4:-18890706 | Msa1143380:CDS |
| GATCGCCGGAATCGGCCGCA+AGG | 0.546043 | 7_4:+18896886 | None:intergenic |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 7_4:-18890425 | Msa1143380:CDS |
| TAACTCAATTTAAGTGTGGT+GGG | 0.547840 | 7_4:-18891124 | Msa1143380:CDS |
| TTGGGCCAGGTCATGCCACT+GGG | 0.547919 | 7_4:-18897062 | Msa1143380:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 7_4:-18890288 | Msa1143380:CDS |
| TTGCCCCTACCATTAGGGTC+GGG | 0.551150 | 7_4:+18890702 | None:intergenic |
| ATCGCCGGAATCGGCCGCAA+GGG | 0.554171 | 7_4:+18896887 | None:intergenic |
| GATTTGAGAGTATCTTCAGT+TGG | 0.555245 | 7_4:-18897081 | Msa1143380:CDS |
| TACTCTCAAATCGTACACTA+AGG | 0.557317 | 7_4:+18897092 | None:intergenic |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 7_4:+18890794 | None:intergenic |
| GCCAGGTCATGCCACTGGGT+CGG | 0.558921 | 7_4:-18897058 | Msa1143380:CDS |
| GTTAGTTGATTGTAAATTTG+GGG | 0.560723 | 7_4:-18890176 | Msa1143380:three_prime_UTR |
| ATTGCCCCTACCATTAGGGT+CGG | 0.561243 | 7_4:+18890701 | None:intergenic |
| GTAACTCAATTTAAGTGTGG+TGG | 0.561280 | 7_4:-18891125 | Msa1143380:CDS |
| CCATAAACACACCGTTAATG+AGG | 0.561910 | 7_4:+18890153 | None:intergenic |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 7_4:-18890289 | Msa1143380:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 7_4:+18890977 | None:intergenic |
| TTTGACTCTGAGGCCGCACA+AGG | 0.563433 | 7_4:-18896967 | Msa1143380:CDS |
| CTTAATTGTTAGGCCTTGTG+CGG | 0.564584 | 7_4:+18896954 | None:intergenic |
| TAGCTGGGCCCATGTTATGG+GGG | 0.565629 | 7_4:-18891087 | Msa1143380:CDS |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 7_4:-18890661 | Msa1143380:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 7_4:-18891050 | Msa1143380:CDS |
| CAGGTAACTCAATTTAAGTG+TGG | 0.580586 | 7_4:-18891128 | Msa1143380:CDS |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 7_4:+18890859 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 7_4:+18891062 | None:intergenic |
| GTCGACCCGACCCTAATGGT+AGG | 0.594252 | 7_4:-18890707 | Msa1143380:CDS |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 7_4:-18890930 | Msa1143380:CDS |
| AGAACCTGCAACAAAATGGA+AGG | 0.600774 | 7_4:+18896703 | None:intergenic |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 7_4:+18890916 | None:intergenic |
| TTCGTCAAGTGCAATGATTG+TGG | 0.601190 | 7_4:-18896847 | Msa1143380:CDS |
| CAATCATTGCACTTGACGAA+GGG | 0.602139 | 7_4:+18896850 | None:intergenic |
| GATTATTATTTCATCCCTTG+CGG | 0.605065 | 7_4:-18896901 | Msa1143380:CDS |
| TTGTGGGAAAACCATACTAG+TGG | 0.606482 | 7_4:+18897128 | None:intergenic |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 7_4:-18890421 | Msa1143380:CDS |
| CGACCCGACCCTAATGGTAG+GGG | 0.607530 | 7_4:-18890705 | Msa1143380:CDS |
| GGTTTACTTCTTTGACTCTG+AGG | 0.609658 | 7_4:-18896977 | Msa1143380:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 7_4:+18890996 | None:intergenic |
| ACAATCATTGCACTTGACGA+AGG | 0.615639 | 7_4:+18896849 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 7_4:-18890424 | Msa1143380:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 7_4:+18890863 | None:intergenic |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 7_4:-18890756 | Msa1143380:CDS |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 7_4:+18890299 | None:intergenic |
| GAAACGAGCAACTTGTAGGA+AGG | 0.635824 | 7_4:+18896760 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 7_4:-18890667 | Msa1143380:CDS |
| TTGTGGAGCAAGAACCATTG+AGG | 0.669130 | 7_4:-18896830 | Msa1143380:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 7_4:-18890834 | Msa1143380:CDS |
| GTCGGGTCGACAAACTGTCA+CGG | 0.691405 | 7_4:+18890719 | None:intergenic |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 7_4:+18891063 | None:intergenic |
| AATTTGTTGAAAGATACAAG+AGG | 0.703489 | 7_4:+18897178 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAATAATTTTTTTTTTA+AGG | + | chr7_4:18894604-18894623 | None:intergenic | 0.0% |
| !! | TATCATTAAATATTTGATTA+AGG | + | chr7_4:18890642-18890661 | None:intergenic | 10.0% |
| !! | TATTAATTATTAGAGTTTAA+TGG | - | chr7_4:18890855-18890874 | Msa1143380:CDS | 10.0% |
| !! | ATTAAAAATATTAATTGATG+TGG | - | chr7_4:18890945-18890964 | Msa1143380:CDS | 10.0% |
| !!! | CTCAAATTAAATTTTTAATT+TGG | - | chr7_4:18891655-18891674 | Msa1143380:intron | 10.0% |
| !!! | AATTAAATTTTTAATTTGGA+AGG | - | chr7_4:18891659-18891678 | Msa1143380:intron | 10.0% |
| !!! | TTTTTATTTTTATTTTACAG+AGG | + | chr7_4:18891696-18891715 | None:intergenic | 10.0% |
| !! | TAAAAAAGTAAATCATTTAT+TGG | - | chr7_4:18892128-18892147 | Msa1143380:intron | 10.0% |
| !!! | ATACATTGATTTTTTTTTTT+TGG | + | chr7_4:18892358-18892377 | None:intergenic | 10.0% |
| !!! | ATTTGATATGAAATTTTTTT+AGG | + | chr7_4:18892776-18892795 | None:intergenic | 10.0% |
| !!! | ACTTTTTAAAAGTTAAAAAA+TGG | - | chr7_4:18894075-18894094 | Msa1143380:intron | 10.0% |
| !! | TAATAAAAACTTACTATTAA+AGG | + | chr7_4:18894224-18894243 | None:intergenic | 10.0% |
| !!! | TATTTATATTTTCAAAATGT+TGG | - | chr7_4:18894465-18894484 | Msa1143380:intron | 10.0% |
| !! | AAAATGAAGAAAATAAAAAA+TGG | - | chr7_4:18894496-18894515 | Msa1143380:intron | 10.0% |
| !!! | TTAAATGTTTTAATTTTTTC+AGG | - | chr7_4:18894724-18894743 | Msa1143380:intron | 10.0% |
| !!! | TTAAACATATTTTTTTTTGA+AGG | - | chr7_4:18895039-18895058 | Msa1143380:intron | 10.0% |
| !! | AAAATATTAAACATATTTAG+AGG | - | chr7_4:18895062-18895081 | Msa1143380:intron | 10.0% |
| !! | AAATATTAAACATATTTAGA+GGG | - | chr7_4:18895063-18895082 | Msa1143380:intron | 10.0% |
| !!! | TTTTTACTTAAATTTTGTTA+AGG | + | chr7_4:18895467-18895486 | None:intergenic | 10.0% |
| !!! | CTTTTATTTTCTTAATTGTT+AGG | + | chr7_4:18890345-18890364 | None:intergenic | 15.0% |
| !! | AACAATTAAGAAAATAAAAG+AGG | - | chr7_4:18890345-18890364 | Msa1143380:CDS | 15.0% |
| !!! | GTAATTTTAAATGTTTTGAT+TGG | - | chr7_4:18890967-18890986 | Msa1143380:CDS | 15.0% |
| !!! | ATGTGCAAAATTTTTTTAAA+CGG | - | chr7_4:18890994-18891013 | Msa1143380:CDS | 15.0% |
| !!! | CATATTTTAAGCTAAAATAT+TGG | + | chr7_4:18891204-18891223 | None:intergenic | 15.0% |
| !!! | CAATATTTTAGCTTAAAATA+TGG | - | chr7_4:18891202-18891221 | Msa1143380:intron | 15.0% |
| !!! | AATCTCTATTTTTTATTGAT+AGG | - | chr7_4:18891879-18891898 | Msa1143380:intron | 15.0% |
| !! | AGAATTCTTAAAAATTGTTT+CGG | - | chr7_4:18892423-18892442 | Msa1143380:intron | 15.0% |
| !!! | GTTGAATTGAATTTTAAATT+AGG | + | chr7_4:18892548-18892567 | None:intergenic | 15.0% |
| !! | AACACTTTAATTAATATGAA+TGG | - | chr7_4:18892925-18892944 | Msa1143380:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr7_4:18893209-18893228 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr7_4:18893208-18893227 | Msa1143380:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr7_4:18893851-18893870 | Msa1143380:intron | 15.0% |
| !! | AAAAATAATAAATGTTGCAT+TGG | - | chr7_4:18893877-18893896 | Msa1143380:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | - | chr7_4:18893918-18893937 | Msa1143380:intron | 15.0% |
| !! | AGTGATTAATTTCTAAATTT+AGG | + | chr7_4:18894304-18894323 | None:intergenic | 15.0% |
| !! | TTAATAAAACTTACTATTAC+AGG | - | chr7_4:18894370-18894389 | Msa1143380:intron | 15.0% |
| !!! | TTTGTTATAATTGAATTAGA+TGG | - | chr7_4:18895288-18895307 | Msa1143380:intron | 15.0% |
| !!! | TTTTGATTAGTTTTTATAGA+AGG | - | chr7_4:18895834-18895853 | Msa1143380:intron | 15.0% |
| !!! | TTTGATTAGTTTTTATAGAA+GGG | - | chr7_4:18895835-18895854 | Msa1143380:intron | 15.0% |
| !!! | TTTTAACCAAAATTCACTTT+TGG | + | chr7_4:18891063-18891082 | None:intergenic | 20.0% |
| !!! | TATTTTAGCTTAAAATATGG+AGG | - | chr7_4:18891205-18891224 | Msa1143380:intron | 20.0% |
| !!! | ATTTTAGCTTAAAATATGGA+GGG | - | chr7_4:18891206-18891225 | Msa1143380:intron | 20.0% |
| !!! | ATTTGAAAATCTGATAGTTT+TGG | + | chr7_4:18891233-18891252 | None:intergenic | 20.0% |
| !! | CTGAAAATAGTTTATGTAAA+TGG | + | chr7_4:18891761-18891780 | None:intergenic | 20.0% |
| !! | TTAAAGTTCTTAAAAATGTC+TGG | + | chr7_4:18892264-18892283 | None:intergenic | 20.0% |
| !!! | TTTTTTTGGTTACATTAAAG+AGG | + | chr7_4:18892344-18892363 | None:intergenic | 20.0% |
| !!! | CACTTTTAAACTCTAAATTT+TGG | + | chr7_4:18892610-18892629 | None:intergenic | 20.0% |
| !! | AAAATTCCATAACTACAATT+AGG | + | chr7_4:18892714-18892733 | None:intergenic | 20.0% |
| !!! | TTGTAGTTATGGAATTTTAT+TGG | - | chr7_4:18892716-18892735 | Msa1143380:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr7_4:18893218-18893237 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr7_4:18893295-18893314 | Msa1143380:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr7_4:18893428-18893447 | Msa1143380:intron | 20.0% |
| !! | GATAAATAAACATTTACCTA+CGG | - | chr7_4:18893619-18893638 | Msa1143380:intron | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr7_4:18893839-18893858 | Msa1143380:intron | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr7_4:18893840-18893859 | Msa1143380:intron | 20.0% |
| !!! | CAATACCTTTTTAAACTAAA+GGG | - | chr7_4:18894161-18894180 | Msa1143380:intron | 20.0% |
| !! | ATTTAAACCTTGATAAATGT+GGG | + | chr7_4:18894554-18894573 | None:intergenic | 20.0% |
| !! | AATTTAAACCTTGATAAATG+TGG | + | chr7_4:18894555-18894574 | None:intergenic | 20.0% |
| !!! | TGCATCTCAATTTTTTTAAA+AGG | + | chr7_4:18894637-18894656 | None:intergenic | 20.0% |
| !! | TTGAAACTAGAAGAAAATTA+TGG | + | chr7_4:18894812-18894831 | None:intergenic | 20.0% |
| !!! | TACTTAAATTTTGTTAAGGA+GGG | + | chr7_4:18895463-18895482 | None:intergenic | 20.0% |
| !!! | TTACTTAAATTTTGTTAAGG+AGG | + | chr7_4:18895464-18895483 | None:intergenic | 20.0% |
| !! | ACAAAAACTGTATTGTATAT+TGG | - | chr7_4:18895943-18895962 | Msa1143380:intron | 20.0% |
| !!! | TTGAGTACTTATATTCTTTT+AGG | - | chr7_4:18895976-18895995 | Msa1143380:intron | 20.0% |
| !! | AAACTTTATGTGCAATAATT+TGG | - | chr7_4:18896504-18896523 | Msa1143380:intron | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | - | chr7_4:18896718-18896737 | Msa1143380:CDS | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | - | chr7_4:18896741-18896760 | Msa1143380:CDS | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | - | chr7_4:18896823-18896842 | Msa1143380:CDS | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | - | chr7_4:18896824-18896843 | Msa1143380:CDS | 20.0% |
| !! | ATGTTAGTTGATTGTAAATT+TGG | - | chr7_4:18897108-18897127 | Msa1143380:CDS | 20.0% |
| !! | TGTTAGTTGATTGTAAATTT+GGG | - | chr7_4:18897109-18897128 | Msa1143380:CDS | 20.0% |
| !!! | AATTTGTTGAAAGATACAAG+AGG | + | chr7_4:18890111-18890130 | None:intergenic | 25.0% |
| ! | GGTTATTAAGCTTATAAGAA+AGG | + | chr7_4:18890140-18890159 | None:intergenic | 25.0% |
| !! | TTTAAGATAGTGAAGTTTCA+TGG | + | chr7_4:18890287-18890306 | None:intergenic | 25.0% |
| ! | ATAATTAATATCACTCCCTA+AGG | + | chr7_4:18890845-18890864 | None:intergenic | 25.0% |
| ! | TTATTAGAGTTTAATGGTAG+TGG | - | chr7_4:18890861-18890880 | Msa1143380:CDS | 25.0% |
| ! | TATTAGAGTTTAATGGTAGT+GGG | - | chr7_4:18890862-18890881 | Msa1143380:CDS | 25.0% |
| ! | GCGTAATAATAAGAGTTTAA+TGG | + | chr7_4:18891031-18891050 | None:intergenic | 25.0% |
| !!! | ATGTTACCATTTTGTTGATT+TGG | + | chr7_4:18891263-18891282 | None:intergenic | 25.0% |
| ! | AATCAACAAAATGGTAACAT+TGG | - | chr7_4:18891263-18891282 | Msa1143380:intron | 25.0% |
| !!! | AGGTTTACACAATGTTTTTT+TGG | + | chr7_4:18891461-18891480 | None:intergenic | 25.0% |
| ! | TAATGAATTCAAAGTTACAG+AGG | + | chr7_4:18891730-18891749 | None:intergenic | 25.0% |
| !!! | AGACATTTTAACACTTTACA+AGG | - | chr7_4:18891779-18891798 | Msa1143380:intron | 25.0% |
| !! | ATAAATGAGATTGATTTCGA+CGG | - | chr7_4:18891968-18891987 | Msa1143380:intron | 25.0% |
| !!! | AATGGATTGGGAAAATAATT+GGG | + | chr7_4:18892177-18892196 | None:intergenic | 25.0% |
| !!! | AAATGGATTGGGAAAATAAT+TGG | + | chr7_4:18892178-18892197 | None:intergenic | 25.0% |
| !! | CATAAAAAGTGAAATGGATT+GGG | + | chr7_4:18892189-18892208 | None:intergenic | 25.0% |
| ! | TGAATGTAGTAGTACTATAA+TGG | + | chr7_4:18892490-18892509 | None:intergenic | 25.0% |
| !!! | AACAGTTAATTTGTTGAACT+TGG | - | chr7_4:18892565-18892584 | Msa1143380:intron | 25.0% |
| ! | ATATCGTCAAAATATATGCA+AGG | + | chr7_4:18892690-18892709 | None:intergenic | 25.0% |
| ! | GATATTCCTAATTGTAGTTA+TGG | - | chr7_4:18892705-18892724 | Msa1143380:intron | 25.0% |
| ! | GGGAACTATTAATAAGAAAT+TGG | + | chr7_4:18892858-18892877 | None:intergenic | 25.0% |
| ! | TGAACTTACTTAATTGGATA+GGG | + | chr7_4:18892880-18892899 | None:intergenic | 25.0% |
| ! | ATTCTATGATGACAAATTGT+TGG | + | chr7_4:18892995-18893014 | None:intergenic | 25.0% |
| ! | AATAGTCTCACCAAATTAAA+TGG | - | chr7_4:18893017-18893036 | Msa1143380:intron | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | + | chr7_4:18893126-18893145 | None:intergenic | 25.0% |
| !!! | TTTAAAATGAGTGTCGTTTT+AGG | - | chr7_4:18893127-18893146 | Msa1143380:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr7_4:18893480-18893499 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr7_4:18893481-18893500 | None:intergenic | 25.0% |
| ! | TAAAATCGTCAAGATTACAA+CGG | + | chr7_4:18893536-18893555 | None:intergenic | 25.0% |
| ! | GTAAATGTTTATTTATCCGT+AGG | + | chr7_4:18893616-18893635 | None:intergenic | 25.0% |
| ! | CAGTAAAATAGTTGAATTCT+AGG | - | chr7_4:18893657-18893676 | Msa1143380:intron | 25.0% |
| !!! | TCCTTTTTTTCCAAATTTTG+AGG | - | chr7_4:18893741-18893760 | Msa1143380:intron | 25.0% |
| ! | AAGAGACAATTAATATGAGA+CGG | - | chr7_4:18893943-18893962 | Msa1143380:intron | 25.0% |
| !!! | AAAATACTAAGAGTGTCTTT+AGG | - | chr7_4:18893988-18894007 | Msa1143380:intron | 25.0% |
| !!! | AAATACTAAGAGTGTCTTTA+GGG | - | chr7_4:18893989-18894008 | Msa1143380:intron | 25.0% |
| ! | AAAAATGTGGTATTGTGAAA+TGG | - | chr7_4:18894034-18894053 | Msa1143380:intron | 25.0% |
| !! | GCAATACCTTTTTAAACTAA+AGG | - | chr7_4:18894160-18894179 | Msa1143380:intron | 25.0% |
| !! | CATTTCCCTTTAGTTTAAAA+AGG | + | chr7_4:18894169-18894188 | None:intergenic | 25.0% |
| ! | AAATGTTAACGAGTATCTTT+GGG | - | chr7_4:18894184-18894203 | Msa1143380:intron | 25.0% |
| ! | TTGAAAACACTCATTAACAA+AGG | + | chr7_4:18894266-18894285 | None:intergenic | 25.0% |
| ! | AATGTTAACAAGTTCTTTCT+GGG | + | chr7_4:18894409-18894428 | None:intergenic | 25.0% |
| ! | AAATGTTAACAAGTTCTTTC+TGG | + | chr7_4:18894410-18894429 | None:intergenic | 25.0% |
| ! | TACAATAATGTGATACTTGA+TGG | + | chr7_4:18894447-18894466 | None:intergenic | 25.0% |
| ! | GAAGAAAATAAAAAATGGAG+AGG | - | chr7_4:18894501-18894520 | Msa1143380:intron | 25.0% |
| !!! | ATTATGGCAGTTTTTAAAAC+AGG | + | chr7_4:18894796-18894815 | None:intergenic | 25.0% |
| ! | AACTAGGAACAAAATATTGT+CGG | - | chr7_4:18894849-18894868 | Msa1143380:intron | 25.0% |
| ! | AGCAAAATTTCAACAAAGTT+TGG | + | chr7_4:18894918-18894937 | None:intergenic | 25.0% |
| ! | AGAAATTTAAAGAATCTCAG+TGG | + | chr7_4:18894969-18894988 | None:intergenic | 25.0% |
| ! | AGCATTTCTCATATATGAAT+AGG | - | chr7_4:18895092-18895111 | Msa1143380:intron | 25.0% |
| ! | ATTAGATTGAAGAAAATACG+TGG | - | chr7_4:18895700-18895719 | Msa1143380:intron | 25.0% |
| ! | TGATCCATCAATTAATGTTA+GGG | - | chr7_4:18895790-18895809 | Msa1143380:intron | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | - | chr7_4:18896235-18896254 | Msa1143380:intron | 25.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | + | chr7_4:18896500-18896519 | None:intergenic | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | - | chr7_4:18896670-18896689 | Msa1143380:intron | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | - | chr7_4:18896740-18896759 | Msa1143380:CDS | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | - | chr7_4:18896742-18896761 | Msa1143380:CDS | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | + | chr7_4:18896792-18896811 | None:intergenic | 25.0% |
| ! | GTTAGTTGATTGTAAATTTG+GGG | - | chr7_4:18897110-18897129 | Msa1143380:CDS | 25.0% |
| AAGCTTAATAACCACTAGTA+TGG | - | chr7_4:18890147-18890166 | Msa1143380:three_prime_UTR | 30.0% | |
| !! | ATTTGAGAGTATCTTCAGTT+GGG | - | chr7_4:18890206-18890225 | Msa1143380:three_prime_UTR | 30.0% |
| GAAACTTCACTATCTTAAAG+TGG | - | chr7_4:18890288-18890307 | Msa1143380:CDS | 30.0% | |
| GATTATTATTTCATCCCTTG+CGG | - | chr7_4:18890385-18890404 | Msa1143380:CDS | 30.0% | |
| GAAGGAGAAAATGATAATTC+TGG | + | chr7_4:18890568-18890587 | None:intergenic | 30.0% | |
| TTAAAGAACCTGCAACAAAA+TGG | + | chr7_4:18890590-18890609 | None:intergenic | 30.0% | |
| TAGAGAGATGCATATGTATT+AGG | + | chr7_4:18890669-18890688 | None:intergenic | 30.0% | |
| ! | TTGTACGTGCAAAATTGTTT+TGG | + | chr7_4:18890896-18890915 | None:intergenic | 30.0% |
| ! | TTCTCTCCAAAAGTGAATTT+TGG | - | chr7_4:18891054-18891073 | Msa1143380:CDS | 30.0% |
| AGAAGACCAAATCAACAAAA+TGG | - | chr7_4:18891254-18891273 | Msa1143380:intron | 30.0% | |
| AACTAACTTCATCGTCTTTA+AGG | - | chr7_4:18891359-18891378 | Msa1143380:intron | 30.0% | |
| !!! | CCTTTCACTCTCATTTTTTA+TGG | + | chr7_4:18891615-18891634 | None:intergenic | 30.0% |
| CCATAAAAAATGAGAGTGAA+AGG | - | chr7_4:18891612-18891631 | Msa1143380:intron | 30.0% | |
| AGAGTGAAAGGAAAGTTAAA+AGG | - | chr7_4:18891624-18891643 | Msa1143380:intron | 30.0% | |
| GAGTGAAAGGAAAGTTAAAA+GGG | - | chr7_4:18891625-18891644 | Msa1143380:intron | 30.0% | |
| ATAGACTCTGTAATTTGAGT+GGG | + | chr7_4:18891919-18891938 | None:intergenic | 30.0% | |
| AATAGACTCTGTAATTTGAG+TGG | + | chr7_4:18891920-18891939 | None:intergenic | 30.0% | |
| TTACACTCTTATTAACCGAA+GGG | + | chr7_4:18892035-18892054 | None:intergenic | 30.0% | |
| ATTACACTCTTATTAACCGA+AGG | + | chr7_4:18892036-18892055 | None:intergenic | 30.0% | |
| ! | AGTAAATCATTTATTGGCCT+TGG | - | chr7_4:18892134-18892153 | Msa1143380:intron | 30.0% |
| CCATAAAAAGTGAAATGGAT+TGG | + | chr7_4:18892190-18892209 | None:intergenic | 30.0% | |
| !!! | CCAATCCATTTCACTTTTTA+TGG | - | chr7_4:18892187-18892206 | Msa1143380:intron | 30.0% |
| CTCTACCATAAAAAGTGAAA+TGG | + | chr7_4:18892195-18892214 | None:intergenic | 30.0% | |
| TGTAGTAGTACTATAATGGT+AGG | + | chr7_4:18892486-18892505 | None:intergenic | 30.0% | |
| !!! | GACGATATTCCTTTTTTTTG+TGG | - | chr7_4:18892642-18892661 | Msa1143380:intron | 30.0% |
| !!! | GATATTCCTTTTTTTTGTGG+TGG | - | chr7_4:18892645-18892664 | Msa1143380:intron | 30.0% |
| AAGAAATTGGTTGCAAATAC+CGG | + | chr7_4:18892845-18892864 | None:intergenic | 30.0% | |
| AACTTACTTAATTGGATAGG+GGG | + | chr7_4:18892878-18892897 | None:intergenic | 30.0% | |
| GAACTTACTTAATTGGATAG+GGG | + | chr7_4:18892879-18892898 | None:intergenic | 30.0% | |
| GTGAACTTACTTAATTGGAT+AGG | + | chr7_4:18892881-18892900 | None:intergenic | 30.0% | |
| GTTAGGTGAACTTACTTAAT+TGG | + | chr7_4:18892886-18892905 | None:intergenic | 30.0% | |
| TACATGACTTCTGTATGATT+TGG | + | chr7_4:18892957-18892976 | None:intergenic | 30.0% | |
| GAAGTCATGTACAGTATTTA+TGG | - | chr7_4:18892966-18892985 | Msa1143380:intron | 30.0% | |
| GGGTACTATACCATTTAATT+TGG | + | chr7_4:18893030-18893049 | None:intergenic | 30.0% | |
| GAAAGAAACTCCTAACTTTA+AGG | + | chr7_4:18893056-18893075 | None:intergenic | 30.0% | |
| ! | GAGTATTATTTAGAGTAGGA+GGG | + | chr7_4:18893100-18893119 | None:intergenic | 30.0% |
| ! | GATGGAGTATTATTTAGAGT+AGG | + | chr7_4:18893104-18893123 | None:intergenic | 30.0% |
| ! | AGTCGTTTAAGGTTTATACA+CGG | - | chr7_4:18893391-18893410 | Msa1143380:intron | 30.0% |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr7_4:18893477-18893496 | Msa1143380:intron | 30.0% | |
| AAAATCGTCAAGATTACAAC+GGG | + | chr7_4:18893535-18893554 | None:intergenic | 30.0% | |
| GTTAATTATACATTGTCCGT+AGG | + | chr7_4:18893638-18893657 | None:intergenic | 30.0% | |
| !!! | ACTAATTGTCATTTTTCCGT+AGG | + | chr7_4:18893689-18893708 | None:intergenic | 30.0% |
| GGAAAAATGACAATTAGTGA+CGG | - | chr7_4:18893691-18893710 | Msa1143380:intron | 30.0% | |
| GGAAAAAAAACTTGTACCTA+CGG | + | chr7_4:18893724-18893743 | None:intergenic | 30.0% | |
| GCCTCAAAATTTGGAAAAAA+AGG | + | chr7_4:18893745-18893764 | None:intergenic | 30.0% | |
| AGAAGACAGACATAAAAATG+TGG | - | chr7_4:18894021-18894040 | Msa1143380:intron | 30.0% | |
| TGTGAAATGGTTAAAAGTGA+TGG | - | chr7_4:18894047-18894066 | Msa1143380:intron | 30.0% | |
| TATTTACTTAACTAGTGCTC+CGG | - | chr7_4:18894125-18894144 | Msa1143380:intron | 30.0% | |
| GAAATGTTAACGAGTATCTT+TGG | - | chr7_4:18894183-18894202 | Msa1143380:intron | 30.0% | |
| CTAGTTTAGTTGCTATAACA+TGG | + | chr7_4:18894835-18894854 | None:intergenic | 30.0% | |
| CATGTTATAGCAACTAAACT+AGG | - | chr7_4:18894833-18894852 | Msa1143380:intron | 30.0% | |
| !! | TAATTATCCCAATTTGTTGC+TGG | - | chr7_4:18894876-18894895 | Msa1143380:intron | 30.0% |
| CATCTCTCATAAAAATGACA+AGG | + | chr7_4:18895198-18895217 | None:intergenic | 30.0% | |
| GGATAAGATGTACATAAGTA+CGG | + | chr7_4:18895343-18895362 | None:intergenic | 30.0% | |
| CACAAAAAGACAAAAAAGAG+AGG | + | chr7_4:18895364-18895383 | None:intergenic | 30.0% | |
| !! | TAAGAAAACTGAAAAGTGTC+AGG | + | chr7_4:18895426-18895445 | None:intergenic | 30.0% |
| GTGATCCATCAATTAATGTT+AGG | - | chr7_4:18895789-18895808 | Msa1143380:intron | 30.0% | |
| CTTTCCCTAACATTAATTGA+TGG | + | chr7_4:18895797-18895816 | None:intergenic | 30.0% | |
| CTTCAAGAATATTCAATGCA+TGG | + | chr7_4:18896111-18896130 | None:intergenic | 30.0% | |
| TAACTCAATTTAAGTGTGGT+GGG | - | chr7_4:18896162-18896181 | Msa1143380:intron | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | - | chr7_4:18896234-18896253 | Msa1143380:intron | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | - | chr7_4:18896236-18896255 | Msa1143380:intron | 30.0% | |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | + | chr7_4:18896267-18896286 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | + | chr7_4:18896323-18896342 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | + | chr7_4:18896324-18896343 | None:intergenic | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | + | chr7_4:18896399-18896418 | None:intergenic | 30.0% |
| TTCTTGCAAGTTGTTCATTA+GGG | + | chr7_4:18896444-18896463 | None:intergenic | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | - | chr7_4:18896450-18896469 | Msa1143380:intron | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | - | chr7_4:18896451-18896470 | Msa1143380:intron | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | - | chr7_4:18896452-18896471 | Msa1143380:intron | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | + | chr7_4:18896495-18896514 | None:intergenic | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | + | chr7_4:18896496-18896515 | None:intergenic | 30.0% | |
| AAATGACCAATTGATATGCA+AGG | - | chr7_4:18896619-18896638 | Msa1143380:intron | 30.0% | |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | - | chr7_4:18896764-18896783 | Msa1143380:CDS | 30.0% |
| GTGTGTAGTAAACAAATCTT+GGG | + | chr7_4:18896856-18896875 | None:intergenic | 30.0% | |
| AGTGTGTAGTAAACAAATCT+TGG | + | chr7_4:18896857-18896876 | None:intergenic | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | - | chr7_4:18896860-18896879 | Msa1143380:CDS | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | - | chr7_4:18896861-18896880 | Msa1143380:CDS | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | + | chr7_4:18896951-18896970 | None:intergenic | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | - | chr7_4:18896952-18896971 | Msa1143380:CDS | 30.0% | |
| ! | AGTTTTACCATTTCATCTTC+TGG | + | chr7_4:18896962-18896981 | None:intergenic | 30.0% |
| TACTCTCAAATCGTACACTA+AGG | + | chr7_4:18890197-18890216 | None:intergenic | 35.0% | |
| !! | GATTTGAGAGTATCTTCAGT+TGG | - | chr7_4:18890205-18890224 | Msa1143380:three_prime_UTR | 35.0% |
| ! | GATGTTTTTCACAATCCGAA+CGG | - | chr7_4:18890250-18890269 | Msa1143380:three_prime_UTR | 35.0% |
| !! | ATCTAGAGTTTTGGTGCAAT+TGG | + | chr7_4:18890482-18890501 | None:intergenic | 35.0% |
| !! | AAGCCATTCATCTAGAGTTT+TGG | + | chr7_4:18890491-18890510 | None:intergenic | 35.0% |
| TCGTTTCTCAACAAGTCATT+GGG | - | chr7_4:18890542-18890561 | Msa1143380:CDS | 35.0% | |
| ! | AAGCCTGTAACCAATTTGTT+AGG | - | chr7_4:18891318-18891337 | Msa1143380:intron | 35.0% |
| TGACCTAACAAATTGGTTAC+AGG | + | chr7_4:18891324-18891343 | None:intergenic | 35.0% | |
| GTTAGCATGACCTAACAAAT+TGG | + | chr7_4:18891331-18891350 | None:intergenic | 35.0% | |
| !!! | CACAATGTTTTTTTGGTCAC+AGG | + | chr7_4:18891454-18891473 | None:intergenic | 35.0% |
| AACCTAAAGCCTGTAATGTA+AGG | - | chr7_4:18891476-18891495 | Msa1143380:intron | 35.0% | |
| TTCCTTACATTACAGGCTTT+AGG | + | chr7_4:18891481-18891500 | None:intergenic | 35.0% | |
| AAGCCTGTAATGTAAGGAAT+TGG | - | chr7_4:18891482-18891501 | Msa1143380:intron | 35.0% | |
| ACTGTCACATAAAGATTGAG+AGG | - | chr7_4:18891506-18891525 | Msa1143380:intron | 35.0% | |
| CTGTCACATAAAGATTGAGA+GGG | - | chr7_4:18891507-18891526 | Msa1143380:intron | 35.0% | |
| TAGACTCTGTAATTTGAGTG+GGG | + | chr7_4:18891918-18891937 | None:intergenic | 35.0% | |
| TACACTCTTATTAACCGAAG+GGG | + | chr7_4:18892034-18892053 | None:intergenic | 35.0% | |
| !! | AAAATAATTGGGTTGACGGT+CGG | + | chr7_4:18892166-18892185 | None:intergenic | 35.0% |
| !! | TGGGAAAATAATTGGGTTGA+CGG | + | chr7_4:18892170-18892189 | None:intergenic | 35.0% |
| TCAAAATATATGCAAGGTCC+GGG | + | chr7_4:18892684-18892703 | None:intergenic | 35.0% | |
| GTCAAAATATATGCAAGGTC+CGG | + | chr7_4:18892685-18892704 | None:intergenic | 35.0% | |
| AAAAGTAGCAGTGAGTAGTT+AGG | + | chr7_4:18892903-18892922 | None:intergenic | 35.0% | |
| ! | TGACTTCTGTATGATTTGGA+AGG | + | chr7_4:18892953-18892972 | None:intergenic | 35.0% |
| ! | AACTCCTAACTTTAAGGAGA+GGG | + | chr7_4:18893050-18893069 | None:intergenic | 35.0% |
| ! | AAACTCCTAACTTTAAGGAG+AGG | + | chr7_4:18893051-18893070 | None:intergenic | 35.0% |
| GAGTAGTAAAGTAGAGAACA+TGG | + | chr7_4:18893078-18893097 | None:intergenic | 35.0% | |
| ! | GGAGTATTATTTAGAGTAGG+AGG | + | chr7_4:18893101-18893120 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+TGG | + | chr7_4:18893122-18893141 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr7_4:18893257-18893276 | Msa1143380:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr7_4:18893361-18893380 | Msa1143380:intron | 35.0% |
| ! | GTCGTTTAAGGTTTATACAC+GGG | - | chr7_4:18893392-18893411 | Msa1143380:intron | 35.0% |
| AGGTTTATACACGGGTATTA+AGG | - | chr7_4:18893400-18893419 | Msa1143380:intron | 35.0% | |
| AAATCGTCAAGATTACAACG+GGG | + | chr7_4:18893534-18893553 | None:intergenic | 35.0% | |
| ! | ACACACATGACTTTTACCTA+CGG | - | chr7_4:18893597-18893616 | Msa1143380:intron | 35.0% |
| ! | GAATTCTAGGCTTTTACCTA+CGG | - | chr7_4:18893670-18893689 | Msa1143380:intron | 35.0% |
| AGACAATTAATATGAGACGG+AGG | - | chr7_4:18893946-18893965 | Msa1143380:intron | 35.0% | |
| GACAATTAATATGAGACGGA+GGG | - | chr7_4:18893947-18893966 | Msa1143380:intron | 35.0% | |
| ATTTACTTAACTAGTGCTCC+GGG | - | chr7_4:18894126-18894145 | Msa1143380:intron | 35.0% | |
| AACAAAGTTTGGACATGAGA+TGG | + | chr7_4:18894907-18894926 | None:intergenic | 35.0% | |
| !!! | AACTGAAAAGTGTCAGGTTT+TGG | + | chr7_4:18895420-18895439 | None:intergenic | 35.0% |
| ATTGAAGAAAATACGTGGTG+TGG | - | chr7_4:18895705-18895724 | Msa1143380:intron | 35.0% | |
| !! | CTTATCTCTAGTCTTGTGAA+AGG | + | chr7_4:18895740-18895759 | None:intergenic | 35.0% |
| ACGTAGTACTCTATAACTGA+AGG | + | chr7_4:18895903-18895922 | None:intergenic | 35.0% | |
| !! | GAAAAGCATTCATAAGTCGT+TGG | - | chr7_4:18896130-18896149 | Msa1143380:intron | 35.0% |
| CAGGTAACTCAATTTAAGTG+TGG | - | chr7_4:18896158-18896177 | Msa1143380:intron | 35.0% | |
| GTAACTCAATTTAAGTGTGG+TGG | - | chr7_4:18896161-18896180 | Msa1143380:intron | 35.0% | |
| ! | TGAAATCTGAAGCTGAATGT+GGG | + | chr7_4:18896226-18896245 | None:intergenic | 35.0% |
| ! | ATGAAATCTGAAGCTGAATG+TGG | + | chr7_4:18896227-18896246 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | + | chr7_4:18896312-18896331 | None:intergenic | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | + | chr7_4:18896325-18896344 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | - | chr7_4:18896322-18896341 | Msa1143380:intron | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | + | chr7_4:18896339-18896358 | None:intergenic | 35.0% |
| AGGAACCAGCTACATTTAAA+CGG | - | chr7_4:18896342-18896361 | Msa1143380:intron | 35.0% | |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | + | chr7_4:18896394-18896413 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | + | chr7_4:18896395-18896414 | None:intergenic | 35.0% |
| GTTCTTGCAAGTTGTTCATT+AGG | + | chr7_4:18896445-18896464 | None:intergenic | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | + | chr7_4:18896497-18896516 | None:intergenic | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | - | chr7_4:18896862-18896881 | Msa1143380:CDS | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | + | chr7_4:18896917-18896936 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | - | chr7_4:18896914-18896933 | Msa1143380:CDS | 35.0% | |
| AAATCCGAGCTTAATGTGTA+TGG | - | chr7_4:18896983-18897002 | Msa1143380:CDS | 35.0% | |
| GATACCATACACATTAAGCT+CGG | + | chr7_4:18896990-18897009 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | - | chr7_4:18896997-18897016 | Msa1143380:CDS | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | - | chr7_4:18896998-18897017 | Msa1143380:CDS | 35.0% | |
| ! | TGAGGGTGACTTTTAATGAT+TGG | - | chr7_4:18897015-18897034 | Msa1143380:CDS | 35.0% |
| ! | TAAATTTGGGGCCTCATTAA+CGG | - | chr7_4:18897122-18897141 | Msa1143380:CDS | 35.0% |
| TTGTGGGAAAACCATACTAG+TGG | + | chr7_4:18890161-18890180 | None:intergenic | 40.0% | |
| AGGTCTCTTTCTCTTCTTGT+GGG | + | chr7_4:18890177-18890196 | None:intergenic | 40.0% | |
| AAGGTCTCTTTCTCTTCTTG+TGG | + | chr7_4:18890178-18890197 | None:intergenic | 40.0% | |
| ! | TTTTCACAATCCGAACGGTT+TGG | - | chr7_4:18890255-18890274 | Msa1143380:three_prime_UTR | 40.0% |
| GGTTTACTTCTTTGACTCTG+AGG | - | chr7_4:18890309-18890328 | Msa1143380:CDS | 40.0% | |
| ! | CTTAATTGTTAGGCCTTGTG+CGG | + | chr7_4:18890335-18890354 | None:intergenic | 40.0% |
| CAATCATTGCACTTGACGAA+GGG | + | chr7_4:18890439-18890458 | None:intergenic | 40.0% | |
| ACAATCATTGCACTTGACGA+AGG | + | chr7_4:18890440-18890459 | None:intergenic | 40.0% | |
| TTCGTCAAGTGCAATGATTG+TGG | - | chr7_4:18890439-18890458 | Msa1143380:CDS | 40.0% | |
| GCACCAAAACTCTAGATGAA+TGG | - | chr7_4:18890485-18890504 | Msa1143380:CDS | 40.0% | |
| !! | AGATGAATGGCTTGCTATGA+TGG | - | chr7_4:18890498-18890517 | Msa1143380:CDS | 40.0% |
| !! | AATGGCTTGCTATGATGGAT+TGG | - | chr7_4:18890503-18890522 | Msa1143380:CDS | 40.0% |
| TTGAGAAACGAGCAACTTGT+AGG | + | chr7_4:18890533-18890552 | None:intergenic | 40.0% | |
| CTCGTTTCTCAACAAGTCAT+TGG | - | chr7_4:18890541-18890560 | Msa1143380:CDS | 40.0% | |
| ! | TTCTCCTTCCATTTTGTTGC+AGG | - | chr7_4:18890579-18890598 | Msa1143380:CDS | 40.0% |
| AGAACCTGCAACAAAATGGA+AGG | + | chr7_4:18890586-18890605 | None:intergenic | 40.0% | |
| TAATATCACTCCCTAAGGCA+AGG | + | chr7_4:18890840-18890859 | None:intergenic | 40.0% | |
| GTGCCAATTCCTTACATTAC+AGG | + | chr7_4:18891488-18891507 | None:intergenic | 40.0% | |
| ACACTCTTATTAACCGAAGG+GGG | + | chr7_4:18892033-18892052 | None:intergenic | 40.0% | |
| !!! | TTCCTTTTTTTTGTGGTGGC+CGG | - | chr7_4:18892649-18892668 | Msa1143380:intron | 40.0% |
| CAAAATATATGCAAGGTCCG+GGG | + | chr7_4:18892683-18892702 | None:intergenic | 40.0% | |
| AGTACCCTCTCCTTAAAGTT+AGG | - | chr7_4:18893043-18893062 | Msa1143380:intron | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr7_4:18893260-18893279 | Msa1143380:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_4:18893365-18893384 | Msa1143380:intron | 40.0% |
| ATTGTAGTTAGTGGAGTAGC+AGG | - | chr7_4:18893486-18893505 | Msa1143380:intron | 40.0% | |
| TTGTAGTTAGTGGAGTAGCA+GGG | - | chr7_4:18893487-18893506 | Msa1143380:intron | 40.0% | |
| CTTAAAGGGGCCTCAAAATT+TGG | + | chr7_4:18893754-18893773 | None:intergenic | 40.0% | |
| TCCAACTTAACTACTCCACA+GGG | + | chr7_4:18893823-18893842 | None:intergenic | 40.0% | |
| ATCCAACTTAACTACTCCAC+AGG | + | chr7_4:18893824-18893843 | None:intergenic | 40.0% | |
| !! | TAAGAGTGTCTTTAGGGCAT+TGG | - | chr7_4:18893995-18894014 | Msa1143380:intron | 40.0% |
| TTTACTTAACTAGTGCTCCG+GGG | - | chr7_4:18894127-18894146 | Msa1143380:intron | 40.0% | |
| AAATGTGGGACTGACCTTAA+TGG | + | chr7_4:18894540-18894559 | None:intergenic | 40.0% | |
| TTAGATGGCTAACAAGTTGC+TGG | - | chr7_4:18895303-18895322 | Msa1143380:intron | 40.0% | |
| TCACAAGACTAGAGATAAGC+TGG | - | chr7_4:18895741-18895760 | Msa1143380:intron | 40.0% | |
| ! | AAGCAACATGGACTTTGGAA+TGG | + | chr7_4:18895769-18895788 | None:intergenic | 40.0% |
| ATCACAAGCAACATGGACTT+TGG | + | chr7_4:18895774-18895793 | None:intergenic | 40.0% | |
| ! | TTGATGGATCACAAGCAACA+TGG | + | chr7_4:18895781-18895800 | None:intergenic | 40.0% |
| GGGCAACACAAATTGTTAAG+AGG | - | chr7_4:18895855-18895874 | Msa1143380:intron | 40.0% | |
| !!! | TCATAAGTCGTTGGTTTTGC+AGG | - | chr7_4:18896139-18896158 | Msa1143380:intron | 40.0% |
| ! | TAAGTGTGGTGGGATTTCAT+TGG | - | chr7_4:18896172-18896191 | Msa1143380:intron | 40.0% |
| ! | AAGTGTGGTGGGATTTCATT+GGG | - | chr7_4:18896173-18896192 | Msa1143380:intron | 40.0% |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | + | chr7_4:18896283-18896302 | None:intergenic | 40.0% |
| ACGGATCTTGGAATGTTGAA+GGG | + | chr7_4:18896293-18896312 | None:intergenic | 40.0% | |
| ! | GTCTCAACACCCCTTAATTT+TGG | - | chr7_4:18896311-18896330 | Msa1143380:intron | 40.0% |
| GGAACCAGCTACATTTAAAC+GGG | - | chr7_4:18896343-18896362 | Msa1143380:intron | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | + | chr7_4:18896350-18896369 | None:intergenic | 40.0% | |
| !! | TACATTTAAACGGGTTGACC+CGG | - | chr7_4:18896352-18896371 | Msa1143380:intron | 40.0% |
| CCCAGCCAACAACAAAAAAA+TGG | - | chr7_4:18896391-18896410 | Msa1143380:intron | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | + | chr7_4:18896430-18896449 | None:intergenic | 40.0% | |
| TATCATTGCCCCTACCATTA+GGG | + | chr7_4:18896592-18896611 | None:intergenic | 40.0% | |
| ATATCATTGCCCCTACCATT+AGG | + | chr7_4:18896593-18896612 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | - | chr7_4:18896595-18896614 | Msa1143380:intron | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | - | chr7_4:18896596-18896615 | Msa1143380:intron | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | + | chr7_4:18896628-18896647 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | - | chr7_4:18896625-18896644 | Msa1143380:intron | 40.0% | |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | - | chr7_4:18896685-18896704 | Msa1143380:intron | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | - | chr7_4:18896898-18896917 | Msa1143380:CDS | 40.0% |
| CCATAAACACACCGTTAATG+AGG | + | chr7_4:18897136-18897155 | None:intergenic | 40.0% | |
| CCTCATTAACGGTGTGTTTA+TGG | - | chr7_4:18897133-18897152 | Msa1143380:exon | 40.0% | |
| TTAACGGTGTGTTTATGGCA+TGG | - | chr7_4:18897138-18897157 | Msa1143380:exon | 40.0% | |
| GATAGTGAAGTTTCATGGCC+AGG | + | chr7_4:18890282-18890301 | None:intergenic | 45.0% | |
| TTGTGGAGCAAGAACCATTG+AGG | - | chr7_4:18890456-18890475 | Msa1143380:CDS | 45.0% | |
| ! | TTTGGTGCAATTGGCCTCAA+TGG | + | chr7_4:18890473-18890492 | None:intergenic | 45.0% |
| GAAACGAGCAACTTGTAGGA+AGG | + | chr7_4:18890529-18890548 | None:intergenic | 45.0% | |
| TTTCGTACTCTCCTTGCCTT+AGG | - | chr7_4:18890826-18890845 | Msa1143380:CDS | 45.0% | |
| TTCGTACTCTCCTTGCCTTA+GGG | - | chr7_4:18890827-18890846 | Msa1143380:CDS | 45.0% | |
| ! | TTGAGAGGGTGTAGTAGTAG+TGG | - | chr7_4:18891521-18891540 | Msa1143380:intron | 45.0% |
| AATTGAGAGAACACCCCCTT+CGG | - | chr7_4:18892017-18892036 | Msa1143380:intron | 45.0% | |
| !!! | TCCTTTTTTTTGTGGTGGCC+GGG | - | chr7_4:18892650-18892669 | Msa1143380:intron | 45.0% |
| CGACTCTAACACAATTTCGC+CGG | - | chr7_4:18892823-18892842 | Msa1143380:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_4:18893364-18893383 | Msa1143380:intron | 45.0% |
| ! | GTCATGTGTGTCACTCTAAG+TGG | + | chr7_4:18893588-18893607 | None:intergenic | 45.0% |
| !!! | TAGTGACGGATTTTGTCCGT+AGG | - | chr7_4:18893705-18893724 | Msa1143380:intron | 45.0% |
| ! | TTGAGGCCCCTTTAAGTTTG+AGG | - | chr7_4:18893758-18893777 | Msa1143380:intron | 45.0% |
| ACAGGGCCTCAAACTTAAAG+GGG | + | chr7_4:18893767-18893786 | None:intergenic | 45.0% | |
| CACAGGGCCTCAAACTTAAA+GGG | + | chr7_4:18893768-18893787 | None:intergenic | 45.0% | |
| GTATTGCTAACCAATGTCCC+CGG | + | chr7_4:18894147-18894166 | None:intergenic | 45.0% | |
| GATCTTAACCCCCTCCATTA+AGG | - | chr7_4:18894523-18894542 | Msa1143380:intron | 45.0% | |
| GGTCAGTCCCACATTTATCA+AGG | - | chr7_4:18894544-18894563 | Msa1143380:intron | 45.0% | |
| GGACAGACCAGCAACAAATT+GGG | + | chr7_4:18894886-18894905 | None:intergenic | 45.0% | |
| TGGACAGACCAGCAACAAAT+TGG | + | chr7_4:18894887-18894906 | None:intergenic | 45.0% | |
| ! | CTCAGTGGTGTCAATAGTGA+TGG | + | chr7_4:18894954-18894973 | None:intergenic | 45.0% |
| GATTTCATTGGGCCTTAGCT+GGG | - | chr7_4:18896184-18896203 | Msa1143380:intron | 45.0% | |
| GACGGATCTTGGAATGTTGA+AGG | + | chr7_4:18896294-18896313 | None:intergenic | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | + | chr7_4:18896426-18896445 | None:intergenic | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | - | chr7_4:18896629-18896648 | Msa1143380:intron | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | - | chr7_4:18896865-18896884 | Msa1143380:CDS | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | - | chr7_4:18896866-18896885 | Msa1143380:CDS | 45.0% | |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | - | chr7_4:18896886-18896905 | Msa1143380:CDS | 45.0% |
| !!! | TGTTTTAAATAAAAATTTAA+AGG | - | chr7_4:18891099-18891118 | Msa1143380:CDS | 5.0% |
| !!! | AAATATTTTTTTACAAATTT+AGG | - | chr7_4:18891822-18891841 | Msa1143380:intron | 5.0% |
| !!! | AATATTTTTTTACAAATTTA+GGG | - | chr7_4:18891823-18891842 | Msa1143380:intron | 5.0% |
| ! | AGAGTATCTTCAGTTGGGCC+AGG | - | chr7_4:18890211-18890230 | Msa1143380:three_prime_UTR | 50.0% |
| GTGAAAAACATCCGACCCAG+TGG | + | chr7_4:18890242-18890261 | None:intergenic | 50.0% | |
| TCCCGGCCACCACAAAAAAA+AGG | + | chr7_4:18892654-18892673 | None:intergenic | 50.0% | |
| ACGGAGGGAGTAGTCGTTTA+AGG | - | chr7_4:18893380-18893399 | Msa1143380:intron | 50.0% | |
| GGCATCCGAATTGTCGAAGA+CGG | + | chr7_4:18893513-18893532 | None:intergenic | 50.0% | |
| GCACAGGGCCTCAAACTTAA+AGG | + | chr7_4:18893769-18893788 | None:intergenic | 50.0% | |
| TTGATGCTCTTGCACAGAGC+CGG | - | chr7_4:18893797-18893816 | Msa1143380:intron | 50.0% | |
| ACTTAACTACTCCACAGGGC+CGG | + | chr7_4:18893819-18893838 | None:intergenic | 50.0% | |
| GCCCTGTGGAGTAGTTAAGT+TGG | - | chr7_4:18893819-18893838 | Msa1143380:intron | 50.0% | |
| TGGGACTGACCTTAATGGAG+GGG | + | chr7_4:18894535-18894554 | None:intergenic | 50.0% | |
| GTGGGACTGACCTTAATGGA+GGG | + | chr7_4:18894536-18894555 | None:intergenic | 50.0% | |
| TGTGGGACTGACCTTAATGG+AGG | + | chr7_4:18894537-18894556 | None:intergenic | 50.0% | |
| ! | TGTGCATGAGAGTATGTGCG+AGG | - | chr7_4:18895380-18895399 | Msa1143380:intron | 50.0% |
| GGATTTCATTGGGCCTTAGC+TGG | - | chr7_4:18896183-18896202 | Msa1143380:intron | 50.0% | |
| CTTAGCTGGGCCCATGTTAT+GGG | - | chr7_4:18896197-18896216 | Msa1143380:intron | 50.0% | |
| TTAGCTGGGCCCATGTTATG+GGG | - | chr7_4:18896198-18896217 | Msa1143380:intron | 50.0% | |
| ATGTGGGTCCCCCATAACAT+GGG | + | chr7_4:18896210-18896229 | None:intergenic | 50.0% | |
| AATGTGGGTCCCCCATAACA+TGG | + | chr7_4:18896211-18896230 | None:intergenic | 50.0% | |
| !! | TTTAAACGGGTTGACCCGGT+TGG | - | chr7_4:18896356-18896375 | Msa1143380:intron | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | - | chr7_4:18896366-18896385 | Msa1143380:intron | 50.0% |
| GGATCCAATGATCACCAACC+GGG | + | chr7_4:18896373-18896392 | None:intergenic | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | + | chr7_4:18896374-18896393 | None:intergenic | 50.0% | |
| ! | GGAGGGGTTTGTTCAACACT+TGG | + | chr7_4:18896479-18896498 | None:intergenic | 50.0% |
| TTCGGATCCTTCTCGAACTC+GGG | + | chr7_4:18896540-18896559 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | + | chr7_4:18896541-18896560 | None:intergenic | 50.0% | |
| AACTGTCACGGTTGTGGGTT+CGG | + | chr7_4:18896558-18896577 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | + | chr7_4:18896563-18896582 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | + | chr7_4:18896564-18896583 | None:intergenic | 50.0% | |
| ATTGCCCCTACCATTAGGGT+CGG | + | chr7_4:18896588-18896607 | None:intergenic | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | - | chr7_4:18896692-18896711 | Msa1143380:intron | 50.0% | |
| ! | CAATCCGAACGGTTTGGACC+TGG | - | chr7_4:18890261-18890280 | Msa1143380:exon | 55.0% |
| ATGGCCAGGTCCAAACCGTT+CGG | + | chr7_4:18890268-18890287 | None:intergenic | 55.0% | |
| !! | TTTGACTCTGAGGCCGCACA+AGG | - | chr7_4:18890319-18890338 | Msa1143380:CDS | 55.0% |
| CAGATTCCGATCGCCGGAAT+CGG | + | chr7_4:18890411-18890430 | None:intergenic | 55.0% | |
| TTGACGGTCGGTCTCAACCA+AGG | + | chr7_4:18892154-18892173 | None:intergenic | 55.0% | |
| CAGGGCCGTCTTCGACAATT+CGG | - | chr7_4:18893505-18893524 | Msa1143380:intron | 55.0% | |
| ! | AAGTTTGAGGCCCTGTGCCA+CGG | - | chr7_4:18893771-18893790 | Msa1143380:intron | 55.0% |
| !! | GGCTCTGTGCAAGAGCATCA+AGG | + | chr7_4:18893798-18893817 | None:intergenic | 55.0% |
| AACTAGTGCTCCGGGGACAT+TGG | - | chr7_4:18894134-18894153 | Msa1143380:intron | 55.0% | |
| GGGACTGACCTTAATGGAGG+GGG | + | chr7_4:18894534-18894553 | None:intergenic | 55.0% | |
| CCATAACATGGGCCCAGCTA+AGG | + | chr7_4:18896199-18896218 | None:intergenic | 55.0% | |
| CCTTAGCTGGGCCCATGTTA+TGG | - | chr7_4:18896196-18896215 | Msa1143380:intron | 55.0% | |
| TAGCTGGGCCCATGTTATGG+GGG | - | chr7_4:18896199-18896218 | Msa1143380:intron | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | + | chr7_4:18896305-18896324 | None:intergenic | 55.0% |
| TGCATAGCCCGAGTTCGAGA+AGG | - | chr7_4:18896530-18896549 | Msa1143380:intron | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | + | chr7_4:18896570-18896589 | None:intergenic | 55.0% | |
| GTTTGTCGACCCGACCCTAA+TGG | - | chr7_4:18896575-18896594 | Msa1143380:intron | 55.0% | |
| TCGACCCGACCCTAATGGTA+GGG | - | chr7_4:18896580-18896599 | Msa1143380:intron | 55.0% | |
| TTGCCCCTACCATTAGGGTC+GGG | + | chr7_4:18896587-18896606 | None:intergenic | 55.0% | |
| CTTCAAGGGGTGGGAGATGA+AGG | - | chr7_4:18896875-18896894 | Msa1143380:CDS | 55.0% | |
| TTGGGCCAGGTCATGCCACT+GGG | - | chr7_4:18890224-18890243 | Msa1143380:three_prime_UTR | 60.0% | |
| ! | TCATCCCTTGCGGCCGATTC+CGG | - | chr7_4:18890395-18890414 | Msa1143380:CDS | 60.0% |
| CGATTCCGGCGATCGGAATC+TGG | - | chr7_4:18890409-18890428 | Msa1143380:CDS | 60.0% | |
| GTCGACCAGATTCCGATCGC+CGG | + | chr7_4:18890417-18890436 | None:intergenic | 60.0% | |
| AAGGTCCGGGGTTCGAATCC+CGG | + | chr7_4:18892671-18892690 | None:intergenic | 60.0% | |
| ! | AGTTTGAGGCCCTGTGCCAC+GGG | - | chr7_4:18893772-18893791 | Msa1143380:intron | 60.0% |
| !! | TGCAAGAGCATCAAGGCCCG+TGG | + | chr7_4:18893791-18893810 | None:intergenic | 60.0% |
| GTCGACCCGACCCTAATGGT+AGG | - | chr7_4:18896579-18896598 | Msa1143380:intron | 60.0% | |
| CGACCCGACCCTAATGGTAG+GGG | - | chr7_4:18896581-18896600 | Msa1143380:intron | 60.0% | |
| GTTGGGCCAGGTCATGCCAC+TGG | - | chr7_4:18890223-18890242 | Msa1143380:three_prime_UTR | 65.0% | |
| GCCAGGTCATGCCACTGGGT+CGG | - | chr7_4:18890228-18890247 | Msa1143380:three_prime_UTR | 65.0% | |
| TCCGACCCAGTGGCATGACC+TGG | + | chr7_4:18890232-18890251 | None:intergenic | 65.0% | |
| ATCGCCGGAATCGGCCGCAA+GGG | + | chr7_4:18890402-18890421 | None:intergenic | 65.0% | |
| ! | TTGCGGCCGATTCCGGCGAT+CGG | - | chr7_4:18890402-18890421 | Msa1143380:CDS | 65.0% |
| GCATCAAGGCCCGTGGCACA+GGG | + | chr7_4:18893784-18893803 | None:intergenic | 65.0% | |
| AGCATCAAGGCCCGTGGCAC+AGG | + | chr7_4:18893785-18893804 | None:intergenic | 65.0% | |
| GATCGCCGGAATCGGCCGCA+AGG | + | chr7_4:18890403-18890422 | None:intergenic | 70.0% | |
| GGTGGCCGGGATTCGAACCC+CGG | - | chr7_4:18892663-18892682 | Msa1143380:intron | 70.0% | |
| CTTGCACAGAGCCGGCCCTG+TGG | - | chr7_4:18893805-18893824 | Msa1143380:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 18890104 | 18897204 | 18890104 | ID=Msa1143380;Name=Msa1143380 |
| chr7_4 | mRNA | 18890104 | 18897204 | 18890104 | ID=Msa1143380-mRNA-1;Parent=Msa1143380;Name=Msa1143380-mRNA-1;_AED=0.01;_eAED=0.01;_QI=62|1|1|1|1|1|2|174|434 |
| chr7_4 | exon | 18890104 | 18891147 | 18890104 | ID=Msa1143380-mRNA-1:exon:4229;Parent=Msa1143380-mRNA-1 |
| chr7_4 | exon | 18896708 | 18897204 | 18896708 | ID=Msa1143380-mRNA-1:exon:4228;Parent=Msa1143380-mRNA-1 |
| chr7_4 | five_prime_UTR | 18897143 | 18897204 | 18897143 | ID=Msa1143380-mRNA-1:five_prime_utr;Parent=Msa1143380-mRNA-1 |
| chr7_4 | CDS | 18896708 | 18897142 | 18896708 | ID=Msa1143380-mRNA-1:cds;Parent=Msa1143380-mRNA-1 |
| chr7_4 | CDS | 18890278 | 18891147 | 18890278 | ID=Msa1143380-mRNA-1:cds;Parent=Msa1143380-mRNA-1 |
| chr7_4 | three_prime_UTR | 18890104 | 18890277 | 18890104 | ID=Msa1143380-mRNA-1:three_prime_utr;Parent=Msa1143380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
