AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1294730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294730 MtrunA17_Chr8g0371821 90.443 429 41 0 1 429 1 429 0.0 808
Msa1294730 MtrunA17_Chr4g0001861 74.827 433 105 3 1 429 1 433 0.0 683
Msa1294730 MtrunA17_Chr2g0334001 70.370 432 125 3 1 429 1 432 0.0 634
Msa1294730 MtrunA17_Chr2g0311401 71.096 301 84 3 132 429 2 302 2.87e-157 446
Msa1294730 MtrunA17_Chr4g0072041 36.889 450 253 9 3 427 14 457 2.02e-95 294
Msa1294730 MtrunA17_Chr4g0054081 36.807 451 237 11 11 427 17 453 3.29e-89 278
Msa1294730 MtrunA17_Chr3g0132001 36.256 422 252 7 11 426 22 432 4.51e-89 277
Msa1294730 MtrunA17_Chr3g0087401 32.969 458 265 13 2 427 1 448 1.67e-84 266
Msa1294730 MtrunA17_Chr7g0253501 35.637 463 254 15 2 428 1 455 3.46e-83 263
Msa1294730 MtrunA17_Chr8g0386141 33.949 433 264 8 3 426 7 426 3.33e-81 257
Msa1294730 MtrunA17_Chr7g0253531 35.421 463 255 15 2 428 1 455 1.16e-80 256
Msa1294730 MtrunA17_Chr7g0224391 34.028 432 268 8 3 426 13 435 9.26e-76 243
Msa1294730 MtrunA17_Chr7g0253541 33.548 465 257 17 3 428 4 455 4.68e-69 226
Msa1294730 MtrunA17_Chr2g0311411 66.197 142 48 0 1 142 1 142 1.90e-61 196
Msa1294730 MtrunA17_Chr2g0306321 31.525 387 233 12 22 388 40 414 3.77e-57 194
Msa1294730 MtrunA17_Chr7g0235531 27.664 441 297 7 3 428 4 437 4.67e-54 186
Msa1294730 MtrunA17_Chr7g0252731 30.788 406 226 13 1 388 15 383 4.04e-52 181
Msa1294730 MtrunA17_Chr1g0165671 30.926 443 275 16 1 425 23 452 2.89e-50 177
Msa1294730 MtrunA17_Chr1g0191081 27.765 443 297 13 1 429 14 447 5.60e-50 175
Msa1294730 MtrunA17_Chr4g0004701 39.545 220 120 5 222 428 21 240 2.48e-49 167
Msa1294730 MtrunA17_Chr1g0165661 29.263 434 261 12 3 412 9 420 6.55e-48 170
Msa1294730 MtrunA17_Chr7g0273761 28.345 441 290 14 1 424 378 809 1.08e-47 174
Msa1294730 MtrunA17_Chr7g0273761 29.180 305 185 11 136 424 32 321 9.56e-26 110
Msa1294730 MtrunA17_Chr5g0433641 28.315 445 287 15 1 425 6 438 1.02e-46 167
Msa1294730 MtrunA17_Chr1g0165681 28.606 416 277 10 8 412 14 420 5.97e-46 165
Msa1294730 MtrunA17_Chr7g0273781 28.637 433 282 13 9 425 49 470 9.48e-45 162
Msa1294730 MtrunA17_Chr7g0273721 26.846 447 292 12 1 425 7 440 1.27e-44 161
Msa1294730 MtrunA17_Chr7g0273731 29.083 447 280 15 1 425 89 520 4.07e-44 161
Msa1294730 MtrunA17_Chr7g0273791 27.640 445 289 15 1 425 6 437 5.85e-43 157
Msa1294730 MtrunA17_Chr3g0113821 26.368 402 269 10 3 388 5 395 2.15e-40 149
Msa1294730 MtrunA17_Chr5g0442701 26.106 452 296 14 3 423 10 454 7.90e-39 145
Msa1294730 MtrunA17_Chr1g0165711 28.899 436 233 15 9 425 15 392 8.63e-39 144
Msa1294730 MtrunA17_Chr4g0027071 26.696 457 282 17 3 424 12 450 1.82e-38 144
Msa1294730 MtrunA17_Chr3g0134041 27.206 408 266 13 26 414 34 429 2.19e-38 144
Msa1294730 MtrunA17_Chr6g0467861 24.948 477 292 16 3 429 47 507 1.66e-37 142
Msa1294730 MtrunA17_Chr3g0141851 27.714 433 270 18 11 423 20 429 2.22e-37 141
Msa1294730 MtrunA17_Chr8g0371851 68.367 98 28 2 1 95 28 125 2.47e-37 133
Msa1294730 MtrunA17_Chr5g0442691 25.000 452 301 13 3 423 33 477 6.90e-37 140
Msa1294730 MtrunA17_Chr3g0123061 27.603 413 251 13 24 423 28 405 9.23e-37 139
Msa1294730 MtrunA17_Chr2g0283361 26.411 443 295 15 2 424 1 432 8.66e-36 137
Msa1294730 MtrunA17_Chr3g0113181 27.250 400 246 14 56 419 66 456 2.35e-33 130
Msa1294730 MtrunA17_Chr3g0134071 27.701 361 218 10 54 389 68 410 2.65e-33 130
Msa1294730 MtrunA17_Chr3g0134091 27.595 395 229 11 56 419 68 436 9.41e-33 128
Msa1294730 MtrunA17_Chr3g0097841 31.532 222 140 5 219 428 21 242 1.14e-32 124
Msa1294730 MtrunA17_Chr4g0053111 25.510 392 254 10 56 429 62 433 5.22e-32 126
Msa1294730 MtrunA17_Chr8g0359251 28.000 400 246 15 43 423 56 432 1.99e-31 124
Msa1294730 MtrunA17_Chr5g0442721 25.000 456 290 14 3 419 10 452 3.03e-31 124
Msa1294730 MtrunA17_Chr3g0134061 26.376 436 270 15 16 414 20 441 3.10e-31 124
Msa1294730 MtrunA17_Chr4g0010331 28.278 389 234 15 56 420 55 422 5.18e-31 123
Msa1294730 MtrunA17_Chr8g0354371 28.084 381 244 15 56 421 64 429 1.09e-30 122
Msa1294730 MtrunA17_Chr3g0106691 28.804 368 229 13 3 348 56 412 2.08e-30 122
Msa1294730 MtrunA17_Chr3g0134111 26.478 389 253 12 56 423 65 441 2.90e-30 121
Msa1294730 MtrunA17_Chr3g0134121 26.500 400 235 13 56 423 69 441 3.00e-30 122
Msa1294730 MtrunA17_Chr3g0095731 26.128 421 262 15 39 423 46 453 4.66e-30 121
Msa1294730 MtrunA17_Chr4g0053081 24.359 390 254 14 56 422 64 435 9.11e-30 120
Msa1294730 MtrunA17_Chr4g0053091 25.381 394 234 15 56 429 67 420 1.37e-29 119
Msa1294730 MtrunA17_Chr4g0010361 27.273 385 250 10 56 420 55 429 1.40e-29 119
Msa1294730 MtrunA17_Chr4g0001801 71.212 66 19 0 151 216 1 66 2.03e-29 109
Msa1294730 MtrunA17_Chr4g0010311 26.098 387 251 12 56 420 55 428 2.67e-29 119
Msa1294730 MtrunA17_Chr4g0004691 31.892 185 116 4 5 184 6 185 4.23e-29 112
Msa1294730 MtrunA17_Chr3g0095721 26.014 419 256 15 51 428 65 470 5.89e-29 118
Msa1294730 MtrunA17_Chr4g0010381 27.411 394 238 17 56 421 55 428 6.04e-29 117
Msa1294730 MtrunA17_Chr3g0087221 27.778 396 242 17 56 421 55 436 7.10e-29 117
Msa1294730 MtrunA17_Chr5g0436621 22.595 447 238 11 55 423 60 476 7.40e-29 118
Msa1294730 MtrunA17_Chr3g0125001 26.753 385 245 16 56 421 55 421 1.87e-28 116
Msa1294730 MtrunA17_Chr6g0470591 30.205 341 204 16 11 327 19 349 4.27e-28 115
Msa1294730 MtrunA17_Chr4g0005941 25.349 430 239 10 56 419 60 473 1.76e-27 114
Msa1294730 MtrunA17_Chr7g0224131 27.249 389 245 11 56 422 55 427 3.75e-27 112
Msa1294730 MtrunA17_Chr4g0053061 26.076 395 250 14 56 422 87 467 4.88e-27 112
Msa1294730 MtrunA17_Chr6g0455341 26.202 416 268 17 39 425 50 455 9.96e-27 111
Msa1294730 MtrunA17_Chr8g0376901 25.116 430 263 19 23 426 28 424 1.46e-26 110
Msa1294730 MtrunA17_Chr7g0252771 28.736 261 157 7 181 427 7 252 1.57e-26 107
Msa1294730 MtrunA17_Chr3g0134101 26.425 386 237 11 56 423 86 442 3.90e-26 109
Msa1294730 MtrunA17_Chr4g0001811 68.493 73 17 2 358 429 15 82 5.74e-26 100
Msa1294730 MtrunA17_Chr8g0374641 26.343 391 245 15 56 420 59 432 5.80e-26 109
Msa1294730 MtrunA17_Chr5g0438701 22.613 398 280 13 35 423 37 415 9.01e-26 108
Msa1294730 MtrunA17_Chr8g0374911 25.840 387 261 13 56 422 80 460 9.50e-26 108
Msa1294730 MtrunA17_Chr3g0106721 27.824 363 238 12 3 346 10 367 1.01e-25 108
Msa1294730 MtrunA17_Chr3g0106661 26.782 463 285 18 3 424 10 459 1.24e-25 108
Msa1294730 MtrunA17_Chr5g0408911 26.596 376 247 15 24 385 41 401 1.71e-25 108
Msa1294730 MtrunA17_Chr7g0270771 29.352 293 163 11 1 277 1 265 1.97e-25 104
Msa1294730 MtrunA17_Chr5g0438681 22.871 411 284 12 24 423 26 414 4.25e-25 106
Msa1294730 MtrunA17_Chr7g0219241 24.368 435 276 16 32 428 52 471 5.11e-25 107
Msa1294730 MtrunA17_Chr6g0455361 25.476 420 263 18 39 425 50 452 4.04e-24 103
Msa1294730 MtrunA17_Chr8g0376911 23.571 420 282 11 24 426 26 423 5.64e-24 103
Msa1294730 MtrunA17_Chr3g0106761 26.667 315 207 10 45 347 9 311 2.28e-23 101
Msa1294730 MtrunA17_Chr4g0010121 26.593 361 217 15 56 389 99 438 3.02e-23 101
Msa1294730 MtrunA17_Chr4g0010351 28.205 273 181 8 56 315 55 325 3.94e-23 100
Msa1294730 MtrunA17_Chr4g0001791 71.875 64 18 0 70 133 1 64 1.25e-22 91.3
Msa1294730 MtrunA17_Chr4g0001781 68.852 61 19 0 1 61 1 61 1.28e-22 90.5
Msa1294730 MtrunA17_Chr7g0219331 24.466 421 261 16 2 383 102 504 2.43e-22 99.4
Msa1294730 MtrunA17_Chr8g0376891 21.481 405 290 12 34 426 36 424 5.20e-22 97.8
Msa1294730 MtrunA17_Chr6g0454761 23.571 420 274 18 39 425 532 937 6.51e-22 99.0
Msa1294730 MtrunA17_Chr6g0454761 22.642 424 272 16 39 425 45 449 2.55e-19 90.9
Msa1294730 MtrunA17_Chr7g0219291 22.633 433 281 15 32 428 399 813 1.12e-21 97.8
Msa1294730 MtrunA17_Chr1g0199561 24.574 411 259 15 35 416 37 425 1.54e-21 96.3
Msa1294730 MtrunA17_Chr7g0274021 26.087 322 222 10 35 348 40 353 2.87e-21 95.9
Msa1294730 MtrunA17_Chr3g0106741 27.551 294 189 11 70 348 59 343 7.33e-21 94.4
Msa1294730 MtrunA17_Chr8g0361771 23.317 416 263 18 1 387 1 389 8.58e-21 94.4
Msa1294730 MtrunA17_Chr2g0302471 29.139 151 98 2 2 151 3 145 1.74e-20 87.4
Msa1294730 MtrunA17_Chr7g0219301 23.176 466 295 15 2 425 9 453 2.10e-20 94.0
Msa1294730 MtrunA17_Chr3g0124341 25.485 412 256 15 56 426 67 468 5.01e-20 92.0
Msa1294730 MtrunA17_Chr8g0361781 24.455 413 256 20 4 387 4 389 5.04e-20 92.0
Msa1294730 MtrunA17_Chr7g0219121 22.362 398 245 14 32 383 50 429 2.29e-19 90.1
Msa1294730 MtrunA17_Chr2g0323501 23.284 408 267 14 56 426 73 471 2.29e-18 87.0
Msa1294730 MtrunA17_Chr7g0219181 22.479 476 309 16 3 428 8 473 4.10e-18 86.3
Msa1294730 MtrunA17_Chr6g0455351 26.154 325 205 11 39 333 50 369 4.48e-18 85.9
Msa1294730 MtrunA17_Chr2g0323481 22.326 430 288 11 34 426 37 457 7.61e-18 85.5
Msa1294730 MtrunA17_Chr3g0087901 23.394 436 256 20 39 422 47 456 7.67e-18 85.5
Msa1294730 MtrunA17_Chr7g0253521 31.538 130 76 4 311 428 16 144 8.26e-18 80.1
Msa1294730 MtrunA17_Chr7g0273741 34.586 133 83 3 9 137 16 148 4.31e-17 78.2
Msa1294730 MtrunA17_Chr3g0083761 24.725 364 230 15 55 385 63 415 9.46e-17 82.0
Msa1294730 MtrunA17_Chr6g0471371 35.556 135 83 3 7 137 13 147 5.59e-16 75.5
Msa1294730 MtrunA17_Chr6g0471971 25.410 244 142 9 151 387 1 211 3.39e-15 74.7
Msa1294730 MtrunA17_Chr3g0106711 31.282 195 121 7 3 185 10 203 3.71e-15 74.7
Msa1294730 MtrunA17_Chr1g0148851 21.789 436 306 12 5 423 13 430 1.18e-14 75.5
Msa1294730 MtrunA17_Chr7g0219881 20.312 448 293 17 24 426 28 456 2.10e-14 74.7
Msa1294730 MtrunA17_Chr3g0097851 32.222 90 61 0 249 338 25 114 2.35e-14 69.3
Msa1294730 MtrunA17_Chr1g0165741 32.374 139 90 3 3 137 9 147 3.11e-14 69.7
Msa1294730 MtrunA17_Chr6g0471381 25.630 238 150 6 187 412 7 229 9.36e-14 71.2
Msa1294730 MtrunA17_Chr8g0353901 25.366 205 147 4 222 422 19 221 7.32e-13 68.2
Msa1294730 MtrunA17_Chr7g0219211 25.000 240 128 9 32 237 52 273 2.65e-12 67.8
Msa1294730 MtrunA17_Chr3g0098961 33.663 101 65 2 9 107 19 119 3.20e-12 65.1
Msa1294730 MtrunA17_Chr3g0097831 35.366 82 52 1 2 82 1 82 1.21e-11 60.5
Msa1294730 MtrunA17_Chr8g0353421 34.343 99 63 2 11 107 17 115 3.11e-11 60.8
Msa1294730 MtrunA17_Chr2g0323511 23.035 369 236 12 55 383 74 434 5.22e-11 64.3
Msa1294730 MtrunA17_Chr8g0378151 26.994 163 118 1 25 187 35 196 6.31e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1294730 AT5G48930.1 66.282 433 142 3 1 429 1 433 0.0 606
Msa1294730 AT5G57840.1 37.387 444 256 7 1 429 1 437 5.98e-104 316
Msa1294730 AT2G19070.1 38.444 450 249 9 3 428 4 449 1.01e-97 300
Msa1294730 AT3G48720.1 33.333 429 274 5 2 426 8 428 3.23e-83 262
Msa1294730 AT5G63560.1 32.947 431 271 5 1 426 7 424 5.41e-82 259
Msa1294730 AT5G41040.2 33.409 440 265 9 3 429 17 441 2.14e-79 252
Msa1294730 AT5G41040.1 33.409 440 265 9 3 429 33 457 2.98e-79 253
Msa1294730 AT1G65450.1 30.713 407 246 13 1 388 16 405 5.01e-53 184
Msa1294730 AT1G27620.1 33.333 387 222 14 56 427 58 423 6.16e-52 181
Msa1294730 AT1G03390.1 28.571 441 271 14 13 426 32 455 1.55e-51 180
Msa1294730 AT5G17540.1 28.837 430 282 10 9 424 15 434 7.87e-48 170
Msa1294730 AT3G03480.1 29.817 436 277 13 3 422 19 441 1.17e-45 164
Msa1294730 AT2G40230.1 26.018 442 293 13 2 426 4 428 3.46e-42 154
Msa1294730 AT1G28680.1 27.753 454 277 17 3 424 4 438 2.95e-41 152
Msa1294730 AT1G78990.1 28.676 408 262 13 33 424 45 439 1.48e-38 145
Msa1294730 AT5G16410.1 27.820 399 257 14 24 406 61 444 8.32e-37 140
Msa1294730 AT1G28680.2 29.282 362 229 13 3 347 4 355 9.37e-37 139
Msa1294730 AT5G23940.1 28.093 388 243 13 56 420 65 439 3.08e-36 139
Msa1294730 AT1G32910.1 28.125 384 243 14 53 415 62 433 1.43e-35 137
Msa1294730 AT5G07860.1 27.806 392 235 12 56 423 72 439 3.87e-35 135
Msa1294730 AT1G24430.1 28.087 413 258 19 24 423 29 415 1.09e-32 128
Msa1294730 AT5G07870.1 25.954 393 253 12 56 423 72 451 6.50e-32 127
Msa1294730 AT5G07080.1 27.212 452 281 18 1 424 12 443 3.56e-31 124
Msa1294730 AT5G42830.1 25.700 393 250 11 56 423 64 439 1.44e-30 122
Msa1294730 AT5G67150.1 28.354 395 231 19 56 420 61 433 1.66e-30 122
Msa1294730 AT3G50280.1 26.020 392 250 13 56 429 59 428 2.50e-30 122
Msa1294730 AT3G50270.1 27.416 445 278 20 8 429 11 433 4.27e-30 121
Msa1294730 AT1G31490.1 28.747 407 249 18 24 410 29 414 4.47e-30 121
Msa1294730 AT5G67160.1 27.247 356 222 10 52 389 52 388 4.80e-30 121
Msa1294730 AT5G01210.1 27.390 387 243 10 67 419 73 455 1.46e-29 120
Msa1294730 AT2G39980.1 24.885 434 227 13 56 419 62 466 1.78e-29 120
Msa1294730 AT5G47950.1 25.728 412 265 14 24 424 29 410 5.41e-29 118
Msa1294730 AT5G07850.1 26.343 391 248 14 56 423 70 443 1.72e-28 117
Msa1294730 AT3G47170.1 29.589 365 206 16 10 341 19 365 1.90e-28 117
Msa1294730 AT4G15390.1 24.449 454 284 19 1 424 6 430 2.96e-28 116
Msa1294730 AT4G15390.2 24.449 454 284 19 1 424 6 430 2.96e-28 116
Msa1294730 AT1G65450.3 30.315 254 152 7 147 388 1 241 3.22e-28 113
Msa1294730 AT3G50300.1 25.814 430 284 16 3 410 4 420 3.50e-28 116
Msa1294730 AT3G30280.1 24.385 447 282 16 1 419 4 422 4.79e-28 115
Msa1294730 AT3G26040.1 25.000 444 289 15 1 424 1 420 5.48e-28 115
Msa1294730 AT4G31910.1 27.960 397 236 18 19 381 27 407 2.07e-27 114
Msa1294730 AT1G24420.2 26.075 372 232 13 67 423 76 419 8.45e-27 112
Msa1294730 AT1G24420.1 26.075 372 232 13 67 423 76 419 8.45e-27 112
Msa1294730 AT5G23970.1 24.201 438 290 15 1 423 1 411 2.14e-26 110
Msa1294730 AT5G38130.1 25.635 433 289 16 3 415 24 443 2.47e-26 110
Msa1294730 AT3G62160.1 25.490 408 233 16 53 428 52 420 3.24e-26 110
Msa1294730 AT3G50280.2 26.129 310 194 10 131 429 13 298 6.68e-26 107
Msa1294730 AT2G23510.1 25.778 450 279 17 8 424 18 445 3.39e-25 107
Msa1294730 AT5G47980.1 24.229 454 277 18 3 422 5 425 7.51e-25 106
Msa1294730 AT3G29670.1 25.000 376 234 15 39 384 45 402 2.90e-23 102
Msa1294730 AT5G39080.1 24.601 439 257 21 39 427 44 458 3.97e-23 101
Msa1294730 AT5G61160.1 23.866 419 283 15 36 427 38 447 8.73e-23 100
Msa1294730 AT5G39090.1 24.213 413 277 14 39 427 44 444 1.00e-22 100
Msa1294730 AT4G15400.1 25.282 443 278 17 3 422 5 417 1.14e-22 100
Msa1294730 AT2G25150.1 23.094 446 310 15 1 423 11 446 1.99e-22 99.8
Msa1294730 AT3G29635.1 23.711 388 250 14 28 383 33 406 6.76e-22 97.8
Msa1294730 AT3G50290.1 27.143 280 181 8 114 381 1 269 1.17e-21 94.7
Msa1294730 AT5G39050.1 24.855 346 223 10 110 427 128 464 8.89e-21 94.7
Msa1294730 AT3G29680.1 24.939 413 273 15 39 425 41 442 9.83e-21 94.4
Msa1294730 AT1G03940.1 26.464 427 260 18 40 426 48 460 3.90e-20 92.8
Msa1294730 AT3G29590.1 23.487 413 277 14 39 425 44 443 2.84e-18 87.0
Msa1294730 AT1G03495.1 27.397 292 176 12 40 300 48 334 4.14e-16 79.7

Find 121 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATCTATGATGCTGATTT+TGG 0.174848 8_3:-52527580 Msa1294730:CDS
AATCTTGGCGTCGAAGAATT+TGG 0.180314 8_3:+52529868 None:intergenic
GACTCATTCATAGATGATTT+TGG 0.200306 8_3:-52529716 Msa1294730:CDS
ATCTGTTGGGATATACAATT+TGG 0.202242 8_3:+52527870 None:intergenic
TGAGCACATGGAAGTGTTTA+AGG 0.217722 8_3:-52527446 Msa1294730:CDS
ACAAAATTATTGAGGTTTAT+AGG 0.234282 8_3:-52527399 Msa1294730:three_prime_UTR
GATTGTGTTGCCAACTTCTT+TGG 0.243766 8_3:+52527975 None:intergenic
CTCACAATAAACCAAGTTTC+AGG 0.274836 8_3:-52527082 Msa1294730:three_prime_UTR
TGGCGTCTTCAAATCAATAT+TGG 0.296957 8_3:+52529937 None:intergenic
GTTGATTACTCGCACGGAAT+TGG 0.305256 8_3:-52529650 Msa1294730:CDS
GCCCCAGGTCCCATGAAAAT+TGG 0.308839 8_3:+52527547 None:intergenic
TATCTAGCGGATGGAGCTTC+TGG 0.323110 8_3:-52528234 Msa1294730:CDS
CATGGAAGTGTTTAAGGAAT+TGG 0.330065 8_3:-52527440 Msa1294730:CDS
CTCCCATCATTTGTTGAGCT+TGG 0.337911 8_3:+52527496 None:intergenic
AACCTTGATCTTCCATCTGT+TGG 0.339884 8_3:+52527856 None:intergenic
ACGCTGGGCGTGTGCACATT+TGG 0.345761 8_3:+52529917 None:intergenic
GTATCCCCTCCTAGTGTTGC+AGG 0.361289 8_3:-52529624 Msa1294730:intron
CAACTAACGATCGCAAGATT+TGG 0.361643 8_3:+52527613 None:intergenic
TACCTCGATTTATTGTCATT+TGG 0.363029 8_3:-52527195 Msa1294730:three_prime_UTR
TTATAGGAGGAATTCTAATA+TGG 0.365749 8_3:-52527383 Msa1294730:three_prime_UTR
AGTAGTGTCCGATCAATAAA+TGG 0.376919 8_3:+52528153 None:intergenic
GAGAGCTTTCTTCATAATCT+TGG 0.393839 8_3:+52529853 None:intergenic
GGGCTGTTGTGGAATCTTCA+TGG 0.396336 8_3:+52528071 None:intergenic
GTCACAATGACCAAATCAAT+AGG 0.399719 8_3:+52527228 None:intergenic
AGATCACTTGCTAGAGCTAT+AGG 0.414190 8_3:+52527781 None:intergenic
CTTGTTACATTCTCTGAGCC+AGG 0.415957 8_3:+52528048 None:intergenic
AGATGTTAGCTGGTCATGTT+TGG 0.416361 8_3:-52527936 Msa1294730:CDS
AAGCTCCATCCGCTAGATAA+TGG 0.417712 8_3:+52528238 None:intergenic
CAAATCTTGCGATCGTTAGT+TGG 0.432391 8_3:-52527612 Msa1294730:CDS
CAATTTGGTTTCTTGATCAT+CGG 0.436135 8_3:+52527885 None:intergenic
ATTCCAAGCTCAACAAATGA+TGG 0.437823 8_3:-52527499 Msa1294730:CDS
ACCTTGATCTTCCATCTGTT+GGG 0.438044 8_3:+52527857 None:intergenic
CCAAAATCAGCATCATAGAT+TGG 0.443349 8_3:+52527580 None:intergenic
AATTTGGTTTCTTGATCATC+GGG 0.446925 8_3:+52527886 None:intergenic
TTGAAGAAACAAAATTATTG+AGG 0.452836 8_3:-52527407 Msa1294730:exon
AAATCTTGCGATCGTTAGTT+GGG 0.456385 8_3:-52527611 Msa1294730:CDS
ATGACCAAATCAATAGGGTT+TGG 0.461640 8_3:+52527234 None:intergenic
AAATGATGGGAGTTTATCTC+TGG 0.468887 8_3:-52527485 Msa1294730:CDS
GTGTCCAAACCCTATTGATT+TGG 0.470236 8_3:-52527238 Msa1294730:three_prime_UTR
GGACCTGGGGCTGATTGTGA+TGG 0.472141 8_3:-52527535 Msa1294730:CDS
GGCGTCGAAGAATTTGGAAA+TGG 0.476256 8_3:+52529874 None:intergenic
GAAGAATTTGGAAATGGTGT+TGG 0.485713 8_3:+52529880 None:intergenic
TCACAATGACCAAATCAATA+GGG 0.488414 8_3:+52527229 None:intergenic
CCATCCCACCATTTATTGAT+CGG 0.494066 8_3:-52528161 Msa1294730:CDS
GAGGAGTCTCACTAGGTGTT+GGG 0.500601 8_3:-52528266 Msa1294730:CDS
CACAATAAACCAAGTTTCAG+GGG 0.505363 8_3:-52527080 Msa1294730:three_prime_UTR
TCCAAATGTTTGAACTCTTG+TGG 0.509604 8_3:+52527004 None:intergenic
AGATTGACTGCGACGGTCAA+GGG 0.512197 8_3:-52529763 Msa1294730:CDS
GACTTGAGAAGATGATCGAT+GGG 0.512591 8_3:+52532473 None:intergenic
GTCTCATTCTATCCAATGGC+AGG 0.512688 8_3:-52529818 Msa1294730:CDS
GTTGCAACCTCCACTTCCAT+CGG 0.513383 8_3:-52527836 Msa1294730:CDS
ACCACTTATGAGATGTTAGC+TGG 0.515378 8_3:-52527946 Msa1294730:CDS
AATGGGTTGTGGTGGATCAC+GGG 0.517116 8_3:+52528125 None:intergenic
CCGAAGTAACCCGATGGAAG+TGG 0.519068 8_3:+52527826 None:intergenic
TTGTTACATTCTCTGAGCCA+GGG 0.519910 8_3:+52528049 None:intergenic
CCCATTGTTGATTACTCGCA+CGG 0.520681 8_3:-52529656 Msa1294730:CDS
TCACAATAAACCAAGTTTCA+GGG 0.521373 8_3:-52527081 Msa1294730:three_prime_UTR
AAATGGGTTGTGGTGGATCA+CGG 0.523511 8_3:+52528124 None:intergenic
TTGCAACCTCCACTTCCATC+GGG 0.527792 8_3:-52527835 Msa1294730:CDS
AGGTTGCACGACAGAGGGTG+TGG 0.528209 8_3:-52529964 Msa1294730:CDS
ACCAGCTAACATCTCATAAG+TGG 0.532159 8_3:+52527945 None:intergenic
GGAGGAGTCTCACTAGGTGT+TGG 0.533578 8_3:-52528267 Msa1294730:CDS
GAGATTGACTGCGACGGTCA+AGG 0.536807 8_3:-52529764 Msa1294730:CDS
TGTCGTGCAACCTCCTCTGA+TGG 0.537379 8_3:+52529974 None:intergenic
TCACAATGCATTGTTGCGAA+TGG 0.539746 8_3:-52527722 Msa1294730:CDS
CCGTGCGAGTAATCAACAAT+GGG 0.543465 8_3:+52529656 None:intergenic
CTGCTTACAGCATACCATGT+TGG 0.546067 8_3:+52527748 None:intergenic
TGAAACATACCTGCAACACT+AGG 0.550704 8_3:+52529615 None:intergenic
AAAGCTAAGTCCAAAGAAGT+TGG 0.554521 8_3:-52527985 Msa1294730:CDS
AGACTTGAGAAGATGATCGA+TGG 0.563265 8_3:+52532472 None:intergenic
TTCCAAGCTCAACAAATGAT+GGG 0.564691 8_3:-52527498 Msa1294730:CDS
GCTTGTCTCATTCTATCCAA+TGG 0.577382 8_3:-52529822 Msa1294730:CDS
GACACTTAACATTAGCGTTG+CGG 0.578284 8_3:+52527635 None:intergenic
TGTTACATTCTCTGAGCCAG+GGG 0.579400 8_3:+52528050 None:intergenic
CCACTTCCATCGGGTTACTT+CGG 0.580903 8_3:-52527826 Msa1294730:CDS
TGATCGATGGGGAGGAGCAG+AGG 0.581841 8_3:+52532485 None:intergenic
ATGCACCATTATCTAGCGGA+TGG 0.586149 8_3:-52528243 Msa1294730:CDS
TTCTCTTCAACATGAGCACA+TGG 0.587094 8_3:-52527458 Msa1294730:CDS
AAATGTGGAGGAGTCTCACT+AGG 0.587340 8_3:-52528273 Msa1294730:CDS
TAAGATGGTGCAACCATCAG+AGG 0.588848 8_3:-52529987 Msa1294730:CDS
AACATACCTGCAACACTAGG+AGG 0.589335 8_3:+52529618 None:intergenic
CAGGTAACATACTTCAAATG+TGG 0.592022 8_3:-52528288 Msa1294730:CDS
CTTCTCAAGTCTCAACCTCA+AGG 0.592352 8_3:-52532461 Msa1294730:intron
GTATTCACTTCATCAATACA+TGG 0.592850 8_3:-52528212 Msa1294730:CDS
TGTTGTGGAATCTTCATGGA+TGG 0.592987 8_3:+52528075 None:intergenic
AGTTTGCACAAGTGCAATGT+GGG 0.593249 8_3:+52529683 None:intergenic
CCGATCAATAAATGGTGGGA+TGG 0.595584 8_3:+52528161 None:intergenic
AAATTGTATATCCCAACAGA+TGG 0.596360 8_3:-52527868 Msa1294730:CDS
TAAGTGTTGTGTTGTTGTCG+TGG 0.596711 8_3:+52532526 None:intergenic
TCCCAACAGATGGAAGATCA+AGG 0.597699 8_3:-52527858 Msa1294730:CDS
ACATACCTGCAACACTAGGA+GGG 0.599464 8_3:+52529619 None:intergenic
GGTTCTATAGAAGTAAACGC+TGG 0.599513 8_3:+52529901 None:intergenic
TCCGTGCGAGTAATCAACAA+TGG 0.601479 8_3:+52529655 None:intergenic
AGTGTCCGATCAATAAATGG+TGG 0.602271 8_3:+52528156 None:intergenic
AAATTATTGAGGTTTATAGG+AGG 0.608707 8_3:-52527396 Msa1294730:three_prime_UTR
GATTGACTGCGACGGTCAAG+GGG 0.613982 8_3:-52529762 Msa1294730:CDS
GTGTCCGATCAATAAATGGT+GGG 0.614323 8_3:+52528157 None:intergenic
GTTCTATAGAAGTAAACGCT+GGG 0.614614 8_3:+52529902 None:intergenic
AGAGGAGGTTGCACGACAGA+GGG 0.614646 8_3:-52529969 Msa1294730:CDS
CGTCGCAGTCAATCTCCACT+CGG 0.618119 8_3:+52529771 None:intergenic
AGTCCATCACAATCAGCCCC+AGG 0.618805 8_3:+52527532 None:intergenic
AAATGTGAGAGATTCTAAGA+TGG 0.628367 8_3:-52530002 Msa1294730:CDS
CAGAGGAGGTTGCACGACAG+AGG 0.628673 8_3:-52529970 Msa1294730:CDS
TGAGAAGATGATCGATGGGG+AGG 0.633457 8_3:+52532477 None:intergenic
CATACCTGCAACACTAGGAG+GGG 0.639094 8_3:+52529620 None:intergenic
AAGTAACCCGATGGAAGTGG+AGG 0.642861 8_3:+52527829 None:intergenic
GTAACATACTTCAAATGTGG+AGG 0.650078 8_3:-52528285 Msa1294730:CDS
AAGTTTGCACAAGTGCAATG+TGG 0.654616 8_3:+52529682 None:intergenic
TTCCAAATGACAATAAATCG+AGG 0.658729 8_3:+52527193 None:intergenic
GTTACATTCTCTGAGCCAGG+GGG 0.664833 8_3:+52528051 None:intergenic
GATGGTGCAACCATCAGAGG+AGG 0.670764 8_3:-52529984 Msa1294730:CDS
ATCTCATGTCAAAACCAACA+TGG 0.673675 8_3:-52527762 Msa1294730:CDS
ACAATAAACCAAGTTTCAGG+GGG 0.674724 8_3:-52527079 Msa1294730:three_prime_UTR
ACATTGCCGAAGTAACCCGA+TGG 0.677759 8_3:+52527820 None:intergenic
TATGAAGAAAGCTCTCAGCA+AGG 0.680412 8_3:-52529846 Msa1294730:CDS
TTACGACAAAGAGGACCGAG+TGG 0.693636 8_3:-52529786 Msa1294730:CDS
TGGGATGCACCATTATCTAG+CGG 0.698386 8_3:-52528247 Msa1294730:CDS
ACATGGTCAGATGTAACTCG+CGG 0.711726 8_3:-52528195 Msa1294730:CDS
ACTTGAGAAGATGATCGATG+GGG 0.732649 8_3:+52532474 None:intergenic
ACTTGCTAGAGCTATAGGTG+CGG 0.736048 8_3:+52527786 None:intergenic
CGAGTGGAGATTGACTGCGA+CGG 0.747066 8_3:-52529770 Msa1294730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTATATATAAATAT+TGG + chr8_3:52527185-52527204 None:intergenic 0.0%
!! TTTATATATAAATATTGGAA+TGG + chr8_3:52527180-52527199 None:intergenic 10.0%
!!! ATATAAATAAAATGTAGTTT+TGG - chr8_3:52527193-52527212 Msa1294730:three_prime_UTR 10.0%
!!! TTTTTTAAAATCAAAACTTT+TGG - chr8_3:52527254-52527273 Msa1294730:three_prime_UTR 10.0%
!! ACAAATTATTCAAATTAAAA+AGG + chr8_3:52527867-52527886 None:intergenic 10.0%
!!! TTTTAGCATATAATTTTATT+TGG + chr8_3:52529042-52529061 None:intergenic 10.0%
!! ATGAAAATAATAAAGAAACA+TGG + chr8_3:52527119-52527138 None:intergenic 15.0%
!!! GACAATTAATTACTATTTTA+AGG + chr8_3:52527311-52527330 None:intergenic 15.0%
!!! ATTAATTGTCCAAATTTTTT+AGG - chr8_3:52527321-52527340 Msa1294730:three_prime_UTR 15.0%
!! ATCAATCTATTATATTTCTT+TGG - chr8_3:52530021-52530040 Msa1294730:exon 15.0%
!! TTATTAAATGAATCTTAAAG+TGG - chr8_3:52530127-52530146 Msa1294730:intron 15.0%
!! GAAAATATCAAAAACTAATT+TGG + chr8_3:52530401-52530420 None:intergenic 15.0%
!! AATTTGAGTAAAGATAATTA+TGG - chr8_3:52530532-52530551 Msa1294730:intron 15.0%
!! AAATAAAAAACAGATGTATT+AGG - chr8_3:52531126-52531145 Msa1294730:intron 15.0%
!! TGAACTAAAAAAAAAGTTAA+TGG - chr8_3:52532426-52532445 Msa1294730:intron 15.0%
!! GAACTAAAAAAAAAGTTAAT+GGG - chr8_3:52532427-52532446 Msa1294730:intron 15.0%
!! CACAACAAATTTGATATTAA+AGG + chr8_3:52527281-52527300 None:intergenic 20.0%
!!! TATCAAATTTGTTGTGATTT+TGG - chr8_3:52527285-52527304 Msa1294730:three_prime_UTR 20.0%
!!! TATTACATTGGTTACAATTA+TGG + chr8_3:52527387-52527406 None:intergenic 20.0%
!!! TTGGTCTTTAATTATTACAT+TGG + chr8_3:52527399-52527418 None:intergenic 20.0%
!!! TTTTTATCCTTCATTTATTG+AGG + chr8_3:52527749-52527768 None:intergenic 20.0%
!! TATATAAACACTTACTAGTT+GGG + chr8_3:52528226-52528245 None:intergenic 20.0%
!! TTATATAAACACTTACTAGT+TGG + chr8_3:52528227-52528246 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+AGG - chr8_3:52528226-52528245 Msa1294730:CDS 20.0%
!! ACTAGTAAGTGTTTATATAA+GGG - chr8_3:52528227-52528246 Msa1294730:CDS 20.0%
!! ATTATATATCCATCAACAAA+AGG - chr8_3:52529117-52529136 Msa1294730:intron 20.0%
!!! GACAAATGAATAATTTTGAT+TGG - chr8_3:52529269-52529288 Msa1294730:intron 20.0%
!! TAAACCATTTACAATTATTG+AGG + chr8_3:52530296-52530315 None:intergenic 20.0%
!!! ATTTGGTATTATTTTTTGTC+AGG + chr8_3:52530384-52530403 None:intergenic 20.0%
!! ATATATATATATAGATGGAC+AGG + chr8_3:52530609-52530628 None:intergenic 20.0%
!!! CTTATATGCAAATTTGTTTA+AGG + chr8_3:52530734-52530753 None:intergenic 20.0%
!! TTGAAGAAACAAAATTATTG+AGG - chr8_3:52532132-52532151 Msa1294730:intron 20.0%
!! ACAAAATTATTGAGGTTTAT+AGG - chr8_3:52532140-52532159 Msa1294730:intron 20.0%
!!! TTATTTTCATTACGTACTTT+TGG - chr8_3:52532402-52532421 Msa1294730:intron 20.0%
!! GACTTTTAGCCTAAAAAATT+TGG + chr8_3:52527333-52527352 None:intergenic 25.0%
!! GCTTTTATAATCAAGCTATT+TGG + chr8_3:52527418-52527437 None:intergenic 25.0%
! CAATAAAAACTTGATATACG+TGG - chr8_3:52527638-52527657 Msa1294730:CDS 25.0%
! AGGATAAAAAAACTTAGAGA+AGG - chr8_3:52527759-52527778 Msa1294730:CDS 25.0%
! TTCTTTCACTAATTGTGTTA+TGG - chr8_3:52527788-52527807 Msa1294730:CDS 25.0%
! AACACTTATACTTTAATCGT+TGG + chr8_3:52527927-52527946 None:intergenic 25.0%
! TTTGCAAAAAACGATTGAAT+TGG + chr8_3:52528072-52528091 None:intergenic 25.0%
! TTTATTGAGTTTAACCATGT+TGG - chr8_3:52528102-52528121 Msa1294730:CDS 25.0%
! GTTAATTCTAGTGAGAAAAT+TGG - chr8_3:52528132-52528151 Msa1294730:CDS 25.0%
! ATATAAACACTTACTAGTTG+GGG + chr8_3:52528225-52528244 None:intergenic 25.0%
! GTTTCTAAATTGGAAATATC+CGG + chr8_3:52528452-52528471 None:intergenic 25.0%
! AGAGTTCATAACAAAAAAAC+GGG + chr8_3:52528570-52528589 None:intergenic 25.0%
! CAGAGTTCATAACAAAAAAA+CGG + chr8_3:52528571-52528590 None:intergenic 25.0%
! AATGATTCGTTAACACAAAT+CGG + chr8_3:52528689-52528708 None:intergenic 25.0%
! ATATACCGAACGAAATTATT+GGG + chr8_3:52528998-52529017 None:intergenic 25.0%
! AATATACCGAACGAAATTAT+TGG + chr8_3:52528999-52529018 None:intergenic 25.0%
!!! TTTTATCCACTTTTCTTGAT+GGG - chr8_3:52529313-52529332 Msa1294730:intron 25.0%
!!! TTATGATCATCGTAGTTTTT+TGG + chr8_3:52529519-52529538 None:intergenic 25.0%
! CAAACCTCAATAATTGTAAA+TGG - chr8_3:52530289-52530308 Msa1294730:intron 25.0%
! TCTGACTCACTATAATATAT+AGG + chr8_3:52530446-52530465 None:intergenic 25.0%
!!! TCCTCGATATTTTTATATCT+GGG + chr8_3:52530480-52530499 None:intergenic 25.0%
! ATAATTATGGAGACCAAAAT+GGG - chr8_3:52530545-52530564 Msa1294730:intron 25.0%
!! AAAGAAAAGATGATTTTGAG+TGG - chr8_3:52530687-52530706 Msa1294730:intron 25.0%
! TAATCAAAATAAGAGACGTT+CGG - chr8_3:52530871-52530890 Msa1294730:intron 25.0%
! ACACAAAAATGATACCATAT+AGG + chr8_3:52531165-52531184 None:intergenic 25.0%
! AATTCAACGTGATCAAAAAT+GGG + chr8_3:52531434-52531453 None:intergenic 25.0%
! AAATTATTGAGGTTTATAGG+AGG - chr8_3:52532143-52532162 Msa1294730:intron 25.0%
! TTATAGGAGGAATTCTAATA+TGG - chr8_3:52532156-52532175 Msa1294730:intron 25.0%
!!! AAGACCAAATAAAAAGTGTT+TGG - chr8_3:52532183-52532202 Msa1294730:intron 25.0%
!!! TAAATCGAGGTATTCTTTTA+TGG + chr8_3:52532336-52532355 None:intergenic 25.0%
TGTAAGTGTGACAAAATAAG+TGG + chr8_3:52527220-52527239 None:intergenic 30.0%
!!! ACTCATCAGTTTTGAGTTAA+AGG - chr8_3:52528018-52528037 Msa1294730:CDS 30.0%
!!! CTCATCAGTTTTGAGTTAAA+GGG - chr8_3:52528019-52528038 Msa1294730:CDS 30.0%
!!! AATCGTTTTTTGCAAACGTA+TGG - chr8_3:52528076-52528095 Msa1294730:CDS 30.0%
AATTAACTAGTGTTCCAACA+TGG + chr8_3:52528119-52528138 None:intergenic 30.0%
GACTTAAAAATGTCTCACAT+TGG - chr8_3:52528192-52528211 Msa1294730:CDS 30.0%
AGTAAGTGTTTATATAAGGG+TGG - chr8_3:52528230-52528249 Msa1294730:CDS 30.0%
GTAAGTGTTTATATAAGGGT+GGG - chr8_3:52528231-52528250 Msa1294730:CDS 30.0%
TAAGTGTTTATATAAGGGTG+GGG - chr8_3:52528232-52528251 Msa1294730:CDS 30.0%
!!! AACGCGTTTTGTTTCTAAAT+TGG + chr8_3:52528462-52528481 None:intergenic 30.0%
!! AACAAAAAAACGGGTTACTT+GGG + chr8_3:52528561-52528580 None:intergenic 30.0%
!! TAACAAAAAAACGGGTTACT+TGG + chr8_3:52528562-52528581 None:intergenic 30.0%
ATATATCCATCAACAAAAGG+TGG - chr8_3:52529120-52529139 Msa1294730:intron 30.0%
AAGCGACATGTATTATGAAA+CGG - chr8_3:52529207-52529226 Msa1294730:intron 30.0%
AAGTGGATAAAAGTAACTCA+TGG + chr8_3:52529305-52529324 None:intergenic 30.0%
!! CTTTTATCCACTTTTCTTGA+TGG - chr8_3:52529312-52529331 Msa1294730:intron 30.0%
!! ACCATTATAGTTGATAGTGT+AGG - chr8_3:52529487-52529506 Msa1294730:intron 30.0%
TCCTACACTATCAACTATAA+TGG + chr8_3:52529491-52529510 None:intergenic 30.0%
! AAATGTGAGAGATTCTAAGA+TGG - chr8_3:52529537-52529556 Msa1294730:intron 30.0%
! GACTCATTCATAGATGATTT+TGG - chr8_3:52529823-52529842 Msa1294730:CDS 30.0%
AGCGAGTAGTTAATAAGATT+TGG - chr8_3:52530175-52530194 Msa1294730:intron 30.0%
TCCCAGATATAAAAATATCG+AGG - chr8_3:52530476-52530495 Msa1294730:intron 30.0%
!! GTCCTCGATATTTTTATATC+TGG + chr8_3:52530481-52530500 None:intergenic 30.0%
GATAATTATGGAGACCAAAA+TGG - chr8_3:52530544-52530563 Msa1294730:intron 30.0%
! CAAAGAATTAATGCCCATTT+TGG + chr8_3:52530561-52530580 None:intergenic 30.0%
TTTATCAAAGATAATTCGCG+TGG - chr8_3:52530582-52530601 Msa1294730:intron 30.0%
AGACAATTGAAGCATAAATG+TGG - chr8_3:52531027-52531046 Msa1294730:intron 30.0%
GACAATTGAAGCATAAATGT+GGG - chr8_3:52531028-52531047 Msa1294730:intron 30.0%
ACAATTGAAGCATAAATGTG+GGG - chr8_3:52531029-52531048 Msa1294730:intron 30.0%
GTGATAGTAGAATACCTATA+TGG - chr8_3:52531148-52531167 Msa1294730:intron 30.0%
GTATTCACTTCATCAATACA+TGG - chr8_3:52531327-52531346 Msa1294730:intron 30.0%
GAATTCAACGTGATCAAAAA+TGG + chr8_3:52531435-52531454 None:intergenic 30.0%
! AATTTGGTTTCTTGATCATC+GGG + chr8_3:52531656-52531675 None:intergenic 30.0%
! CAATTTGGTTTCTTGATCAT+CGG + chr8_3:52531657-52531676 None:intergenic 30.0%
ATCTGTTGGGATATACAATT+TGG + chr8_3:52531672-52531691 None:intergenic 30.0%
AAATTGTATATCCCAACAGA+TGG - chr8_3:52531671-52531690 Msa1294730:intron 30.0%
!! GTGACCAAACACTTTTTATT+TGG + chr8_3:52532190-52532209 None:intergenic 30.0%
TCACAATGACCAAATCAATA+GGG + chr8_3:52532313-52532332 None:intergenic 30.0%
TACCTCGATTTATTGTCATT+TGG - chr8_3:52532344-52532363 Msa1294730:intron 30.0%
TTCCAAATGACAATAAATCG+AGG + chr8_3:52532349-52532368 None:intergenic 30.0%
TCACAATAAACCAAGTTTCA+GGG - chr8_3:52532458-52532477 Msa1294730:intron 30.0%
! AGGCTAAAAGTCATCACTTT+TGG - chr8_3:52527341-52527360 Msa1294730:three_prime_UTR 35.0%
!! TTTGATTTCGAGTCTTGTTG+GGG + chr8_3:52527518-52527537 None:intergenic 35.0%
!! GTTTGATTTCGAGTCTTGTT+GGG + chr8_3:52527519-52527538 None:intergenic 35.0%
! TGTTTGATTTCGAGTCTTGT+TGG + chr8_3:52527520-52527539 None:intergenic 35.0%
AAAGAAAAAAGAGACGCAGA+AGG - chr8_3:52527684-52527703 Msa1294730:CDS 35.0%
AAGAAAAAAGAGACGCAGAA+GGG - chr8_3:52527685-52527704 Msa1294730:CDS 35.0%
CACTCATCCTCAATAAATGA+AGG - chr8_3:52527739-52527758 Msa1294730:CDS 35.0%
GTCTCTTTACTTTACAACTC+AGG - chr8_3:52527888-52527907 Msa1294730:CDS 35.0%
AGTACCCATTCTTTCATAAC+AGG - chr8_3:52527985-52528004 Msa1294730:CDS 35.0%
GTACCCATTCTTTCATAACA+GGG - chr8_3:52527986-52528005 Msa1294730:CDS 35.0%
TACCCATTCTTTCATAACAG+GGG - chr8_3:52527987-52528006 Msa1294730:CDS 35.0%
AACTCAAAACTGATGAGTCA+TGG + chr8_3:52528016-52528035 None:intergenic 35.0%
ACTATGAGAAACTAGTGTGT+GGG - chr8_3:52528164-52528183 Msa1294730:CDS 35.0%
ATTCACCCGTTCACAAAAAT+GGG + chr8_3:52528286-52528305 None:intergenic 35.0%
! AATTTTCTGGATACGCGTTT+TGG + chr8_3:52528429-52528448 None:intergenic 35.0%
! TGGAAATATCCGGAATTTTC+TGG + chr8_3:52528442-52528461 None:intergenic 35.0%
AAACAAAACGCGTTTGCTTA+AGG - chr8_3:52528468-52528487 Msa1294730:intron 35.0%
!! ACAAAAAAACGGGTTACTTG+GGG + chr8_3:52528560-52528579 None:intergenic 35.0%
! TCCTTTTATAGGCAGAGTAT+AGG + chr8_3:52528594-52528613 None:intergenic 35.0%
!! ATTTGGTGTGAAGAATGAGT+GGG + chr8_3:52528625-52528644 None:intergenic 35.0%
GAAACATCAACTGTGAGATT+TGG + chr8_3:52528642-52528661 None:intergenic 35.0%
ATTCGTTAACACAAATCGGA+GGG + chr8_3:52528685-52528704 None:intergenic 35.0%
AACGATTGAACCATACTTTG+AGG - chr8_3:52528818-52528837 Msa1294730:intron 35.0%
GAGAATTACACCTCAAAGTA+TGG + chr8_3:52528831-52528850 None:intergenic 35.0%
ATATACTCGAAACAGTGATC+TGG - chr8_3:52528873-52528892 Msa1294730:intron 35.0%
TATACTCGAAACAGTGATCT+GGG - chr8_3:52528874-52528893 Msa1294730:intron 35.0%
ACTCACCCAATAATTTCGTT+CGG - chr8_3:52528990-52529009 Msa1294730:intron 35.0%
! TTCTATCCACCTTTTGTTGA+TGG + chr8_3:52529129-52529148 None:intergenic 35.0%
GACATGTATTATGAAACGGA+TGG - chr8_3:52529211-52529230 Msa1294730:intron 35.0%
TGGCGTCTTCAAATCAATAT+TGG + chr8_3:52529605-52529624 None:intergenic 35.0%
GTTCTATAGAAGTAAACGCT+GGG + chr8_3:52529640-52529659 None:intergenic 35.0%
GAAGAATTTGGAAATGGTGT+TGG + chr8_3:52529662-52529681 None:intergenic 35.0%
GAGAGCTTTCTTCATAATCT+TGG + chr8_3:52529689-52529708 None:intergenic 35.0%
!! TCGTTTTTGTTACGACAAAG+AGG - chr8_3:52529744-52529763 Msa1294730:CDS 35.0%
ATCTTATTAACTACTCGCTC+TGG + chr8_3:52530174-52530193 None:intergenic 35.0%
CATGAATTCCTCTCGAAAAT+GGG + chr8_3:52530267-52530286 None:intergenic 35.0%
!! CATTTTCGAGAGGAATTCAT+GGG - chr8_3:52530266-52530285 Msa1294730:intron 35.0%
TGTGTTGCGAGAAAATTATG+CGG + chr8_3:52530353-52530372 None:intergenic 35.0%
CAATTGAAGCATAAATGTGG+GGG - chr8_3:52531030-52531049 Msa1294730:intron 35.0%
AATTGAAGCATAAATGTGGG+GGG - chr8_3:52531031-52531050 Msa1294730:intron 35.0%
CAGGTAACATACTTCAAATG+TGG - chr8_3:52531251-52531270 Msa1294730:intron 35.0%
GTAACATACTTCAAATGTGG+AGG - chr8_3:52531254-52531273 Msa1294730:intron 35.0%
AGTAGTGTCCGATCAATAAA+TGG + chr8_3:52531389-52531408 None:intergenic 35.0%
AAAGCTAAGTCCAAAGAAGT+TGG - chr8_3:52531554-52531573 Msa1294730:intron 35.0%
ATCTCATGTCAAAACCAACA+TGG - chr8_3:52531777-52531796 Msa1294730:intron 35.0%
AAATCTTGCGATCGTTAGTT+GGG - chr8_3:52531928-52531947 Msa1294730:intron 35.0%
CCAAAATCAGCATCATAGAT+TGG + chr8_3:52531962-52531981 None:intergenic 35.0%
!!! CCAATCTATGATGCTGATTT+TGG - chr8_3:52531959-52531978 Msa1294730:intron 35.0%
!!! TCTATGATGCTGATTTTGGT+TGG - chr8_3:52531963-52531982 Msa1294730:intron 35.0%
!!! CTATGATGCTGATTTTGGTT+GGG - chr8_3:52531964-52531983 Msa1294730:intron 35.0%
!!! TATGATGCTGATTTTGGTTG+GGG - chr8_3:52531965-52531984 Msa1294730:intron 35.0%
ATTCCAAGCTCAACAAATGA+TGG - chr8_3:52532040-52532059 Msa1294730:intron 35.0%
TTCCAAGCTCAACAAATGAT+GGG - chr8_3:52532041-52532060 Msa1294730:intron 35.0%
! AAATGATGGGAGTTTATCTC+TGG - chr8_3:52532054-52532073 Msa1294730:intron 35.0%
!! CATGGAAGTGTTTAAGGAAT+TGG - chr8_3:52532099-52532118 Msa1294730:intron 35.0%
ATGACCAAATCAATAGGGTT+TGG + chr8_3:52532308-52532327 None:intergenic 35.0%
GTCACAATGACCAAATCAAT+AGG + chr8_3:52532314-52532333 None:intergenic 35.0%
CTCACAATAAACCAAGTTTC+AGG - chr8_3:52532457-52532476 Msa1294730:intron 35.0%
CACAATAAACCAAGTTTCAG+GGG - chr8_3:52532459-52532478 Msa1294730:intron 35.0%
ACAATAAACCAAGTTTCAGG+GGG - chr8_3:52532460-52532479 Msa1294730:intron 35.0%
ACTTGAGAAGATGATCGATG+GGG + chr8_3:52527068-52527087 None:intergenic 40.0%
GACTTGAGAAGATGATCGAT+GGG + chr8_3:52527069-52527088 None:intergenic 40.0%
AGACTTGAGAAGATGATCGA+TGG + chr8_3:52527070-52527089 None:intergenic 40.0%
AGAAAAAAGAGACGCAGAAG+GGG - chr8_3:52527686-52527705 Msa1294730:CDS 40.0%
CACCCCTGTTATGAAAGAAT+GGG + chr8_3:52527992-52528011 None:intergenic 40.0%
ACACCCCTGTTATGAAAGAA+TGG + chr8_3:52527993-52528012 None:intergenic 40.0%
CACTATGAGAAACTAGTGTG+TGG - chr8_3:52528163-52528182 Msa1294730:CDS 40.0%
CATTCACCCGTTCACAAAAA+TGG + chr8_3:52528287-52528306 None:intergenic 40.0%
AACGCGTATCCAGAAAATTC+CGG - chr8_3:52528430-52528449 Msa1294730:intron 40.0%
GCCTATACTCTGCCTATAAA+AGG - chr8_3:52528590-52528609 Msa1294730:intron 40.0%
! TTTGGTGTGAAGAATGAGTG+GGG + chr8_3:52528624-52528643 None:intergenic 40.0%
!! GATTTGGTGTGAAGAATGAG+TGG + chr8_3:52528626-52528645 None:intergenic 40.0%
GATTCGTTAACACAAATCGG+AGG + chr8_3:52528686-52528705 None:intergenic 40.0%
TAGAAGATGAAGAAACCGAC+AGG + chr8_3:52528735-52528754 None:intergenic 40.0%
TAGTCTACCTTGCACAAACT+AGG - chr8_3:52528926-52528945 Msa1294730:intron 40.0%
AGTCTACCTTGCACAAACTA+GGG - chr8_3:52528927-52528946 Msa1294730:intron 40.0%
!! GCTTTCTTTAAGACGTTTCG+CGG + chr8_3:52528958-52528977 None:intergenic 40.0%
TGTTCACCCATCAAGAAAAG+TGG + chr8_3:52529322-52529341 None:intergenic 40.0%
GGTTCTATAGAAGTAAACGC+TGG + chr8_3:52529641-52529660 None:intergenic 40.0%
! AATCTTGGCGTCGAAGAATT+TGG + chr8_3:52529674-52529693 None:intergenic 40.0%
TATGAAGAAAGCTCTCAGCA+AGG - chr8_3:52529693-52529712 Msa1294730:CDS 40.0%
GCTTGTCTCATTCTATCCAA+TGG - chr8_3:52529717-52529736 Msa1294730:CDS 40.0%
TAACAAAAACGACCTGCCAT+TGG + chr8_3:52529736-52529755 None:intergenic 40.0%
AGTTTGCACAAGTGCAATGT+GGG + chr8_3:52529859-52529878 None:intergenic 40.0%
AAGTTTGCACAAGTGCAATG+TGG + chr8_3:52529860-52529879 None:intergenic 40.0%
TGAAACATACCTGCAACACT+AGG + chr8_3:52529927-52529946 None:intergenic 40.0%
!! CATTATCTCCCATTTTCGAG+AGG - chr8_3:52530256-52530275 Msa1294730:intron 40.0%
CCATGAATTCCTCTCGAAAA+TGG + chr8_3:52530268-52530287 None:intergenic 40.0%
!! CCATTTTCGAGAGGAATTCA+TGG - chr8_3:52530265-52530284 Msa1294730:intron 40.0%
GTGTTGCGAGAAAATTATGC+GGG + chr8_3:52530352-52530371 None:intergenic 40.0%
ATAAATTAGGACGAGTCCAG+TGG + chr8_3:52530959-52530978 None:intergenic 40.0%
ACTGGACTCGTCCTAATTTA+TGG - chr8_3:52530958-52530977 Msa1294730:intron 40.0%
!! TAATTTATGGCGGATGGTGA+CGG - chr8_3:52530971-52530990 Msa1294730:intron 40.0%
CGAACTTTAACTATTTGCGC+AGG - chr8_3:52531232-52531251 Msa1294730:intron 40.0%
CCATCCCACCATTTATTGAT+CGG - chr8_3:52531378-52531397 Msa1294730:intron 40.0%
GTGTCCGATCAATAAATGGT+GGG + chr8_3:52531385-52531404 None:intergenic 40.0%
AGTGTCCGATCAATAAATGG+TGG + chr8_3:52531386-52531405 None:intergenic 40.0%
!! TGATCAAAAATGGGTTGTGG+TGG + chr8_3:52531425-52531444 None:intergenic 40.0%
!! ACGTGATCAAAAATGGGTTG+TGG + chr8_3:52531428-52531447 None:intergenic 40.0%
TGTTGTGGAATCTTCATGGA+TGG + chr8_3:52531467-52531486 None:intergenic 40.0%
TTGTTACATTCTCTGAGCCA+GGG + chr8_3:52531493-52531512 None:intergenic 40.0%
GATTGTGTTGCCAACTTCTT+TGG + chr8_3:52531567-52531586 None:intergenic 40.0%
ACCACTTATGAGATGTTAGC+TGG - chr8_3:52531593-52531612 Msa1294730:intron 40.0%
ACCAGCTAACATCTCATAAG+TGG + chr8_3:52531597-52531616 None:intergenic 40.0%
AGATGTTAGCTGGTCATGTT+TGG - chr8_3:52531603-52531622 Msa1294730:intron 40.0%
ACCTTGATCTTCCATCTGTT+GGG + chr8_3:52531685-52531704 None:intergenic 40.0%
AACCTTGATCTTCCATCTGT+TGG + chr8_3:52531686-52531705 None:intergenic 40.0%
! AGATCACTTGCTAGAGCTAT+AGG + chr8_3:52531761-52531780 None:intergenic 40.0%
TCACAATGCATTGTTGCGAA+TGG - chr8_3:52531817-52531836 Msa1294730:intron 40.0%
GACACTTAACATTAGCGTTG+CGG + chr8_3:52531907-52531926 None:intergenic 40.0%
CAACTAACGATCGCAAGATT+TGG + chr8_3:52531929-52531948 None:intergenic 40.0%
CAAATCTTGCGATCGTTAGT+TGG - chr8_3:52531927-52531946 Msa1294730:intron 40.0%
TTCTCTTCAACATGAGCACA+TGG - chr8_3:52532081-52532100 Msa1294730:intron 40.0%
!! TGAGCACATGGAAGTGTTTA+AGG - chr8_3:52532093-52532112 Msa1294730:intron 40.0%
! GTGTCCAAACCCTATTGATT+TGG - chr8_3:52532301-52532320 Msa1294730:intron 40.0%
TACTATAACCCCCTGAAACT+TGG + chr8_3:52532471-52532490 None:intergenic 40.0%
CTTCTCAAGTCTCAACCTCA+AGG - chr8_3:52527078-52527097 Msa1294730:three_prime_UTR 45.0%
TGTCGTTACTCGTTACCTTG+AGG + chr8_3:52527096-52527115 None:intergenic 45.0%
CATCATCTTGTGCGATTGTG+CGG + chr8_3:52527573-52527592 None:intergenic 45.0%
CGTGATTTCGTTGTCTTGTG+CGG + chr8_3:52527607-52527626 None:intergenic 45.0%
CACAAAAATGGGTACCCCAA+GGG + chr8_3:52528275-52528294 None:intergenic 45.0%
TCACAAAAATGGGTACCCCA+AGG + chr8_3:52528276-52528295 None:intergenic 45.0%
!! GGGGTACCCATTTTTGTGAA+CGG - chr8_3:52528277-52528296 Msa1294730:CDS 45.0%
!! GGGTACCCATTTTTGTGAAC+GGG - chr8_3:52528278-52528297 Msa1294730:CDS 45.0%
GCGTAAAACGCGTTTGCTTA+AGG - chr8_3:52528518-52528537 Msa1294730:intron 45.0%
! CACAGTTGATGTTTCCTGTG+CGG - chr8_3:52528647-52528666 Msa1294730:intron 45.0%
TCTACTCCTTTCTGTCCTGT+CGG - chr8_3:52528717-52528736 Msa1294730:intron 45.0%
AAGAAACCGACAGGACAGAA+AGG + chr8_3:52528726-52528745 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + chr8_3:52528799-52528818 None:intergenic 45.0%
!! TGATCTGGGCTGTTTTATCC+TGG - chr8_3:52528888-52528907 Msa1294730:intron 45.0%
ACGTCTTAAAGAAAGCGACC+TGG - chr8_3:52528962-52528981 Msa1294730:intron 45.0%
TAAGATGGTGCAACCATCAG+AGG - chr8_3:52529552-52529571 Msa1294730:intron 45.0%
! GGCGTCGAAGAATTTGGAAA+TGG + chr8_3:52529668-52529687 None:intergenic 45.0%
GTCTCATTCTATCCAATGGC+AGG - chr8_3:52529721-52529740 Msa1294730:CDS 45.0%
CCGTGCGAGTAATCAACAAT+GGG + chr8_3:52529886-52529905 None:intergenic 45.0%
! CCCATTGTTGATTACTCGCA+CGG - chr8_3:52529883-52529902 Msa1294730:CDS 45.0%
TCCGTGCGAGTAATCAACAA+TGG + chr8_3:52529887-52529906 None:intergenic 45.0%
GTTGATTACTCGCACGGAAT+TGG - chr8_3:52529889-52529908 Msa1294730:CDS 45.0%
ACATACCTGCAACACTAGGA+GGG + chr8_3:52529923-52529942 None:intergenic 45.0%
AACATACCTGCAACACTAGG+AGG + chr8_3:52529924-52529943 None:intergenic 45.0%
GACAAAGAGAGATGGTGTTC+CGG + chr8_3:52530932-52530951 None:intergenic 45.0%
GGACTCGTCCTAATTTATGG+CGG - chr8_3:52530961-52530980 Msa1294730:intron 45.0%
! TCGTCCTAATTTATGGCGGA+TGG - chr8_3:52530965-52530984 Msa1294730:intron 45.0%
GTCACCATCCGCCATAAATT+AGG + chr8_3:52530972-52530991 None:intergenic 45.0%
! GGTTGTGATGATGTTGCAGT+TGG - chr8_3:52530992-52531011 Msa1294730:intron 45.0%
TGATGTTGCAGTTGGAGCTT+TGG - chr8_3:52531000-52531019 Msa1294730:intron 45.0%
AAATGTGGAGGAGTCTCACT+AGG - chr8_3:52531266-52531285 Msa1294730:intron 45.0%
TGGGATGCACCATTATCTAG+CGG - chr8_3:52531292-52531311 Msa1294730:intron 45.0%
ATGCACCATTATCTAGCGGA+TGG - chr8_3:52531296-52531315 Msa1294730:intron 45.0%
AAGCTCCATCCGCTAGATAA+TGG + chr8_3:52531304-52531323 None:intergenic 45.0%
ACATGGTCAGATGTAACTCG+CGG - chr8_3:52531344-52531363 Msa1294730:intron 45.0%
! CCGATCAATAAATGGTGGGA+TGG + chr8_3:52531381-52531400 None:intergenic 45.0%
!! AAATGGGTTGTGGTGGATCA+CGG + chr8_3:52531418-52531437 None:intergenic 45.0%
TGTTACATTCTCTGAGCCAG+GGG + chr8_3:52531492-52531511 None:intergenic 45.0%
CTTGTTACATTCTCTGAGCC+AGG + chr8_3:52531494-52531513 None:intergenic 45.0%
TCCCAACAGATGGAAGATCA+AGG - chr8_3:52531681-52531700 Msa1294730:intron 45.0%
! ACTTGCTAGAGCTATAGGTG+CGG + chr8_3:52531756-52531775 None:intergenic 45.0%
CTGCTTACAGCATACCATGT+TGG + chr8_3:52531794-52531813 None:intergenic 45.0%
!!! ATGCTGATTTTGGTTGGGGA+AGG - chr8_3:52531969-52531988 Msa1294730:intron 45.0%
! TTGGGGAAGGCCAATTTTCA+TGG - chr8_3:52531982-52532001 Msa1294730:intron 45.0%
! TGGGGAAGGCCAATTTTCAT+GGG - chr8_3:52531983-52532002 Msa1294730:intron 45.0%
! CTCCCATCATTTGTTGAGCT+TGG + chr8_3:52532046-52532065 None:intergenic 45.0%
!! ATATAATTTAAATATATTGA+TGG + chr8_3:52529065-52529084 None:intergenic 5.0%
!! TATATATATATATATATAGA+TGG + chr8_3:52530614-52530633 None:intergenic 5.0%
!! ATAAAAAAACAAAATAAAAA+TGG + chr8_3:52532386-52532405 None:intergenic 5.0%
TGAGAAGATGATCGATGGGG+AGG + chr8_3:52527065-52527084 None:intergenic 50.0%
! ACGCGTTTTACGCGTGACTT+GGG + chr8_3:52528511-52528530 None:intergenic 50.0%
! AACGCGTTTTACGCGTGACT+TGG + chr8_3:52528512-52528531 None:intergenic 50.0%
TCTACTCCTTTCTGTCCCGT+CGG - chr8_3:52528751-52528770 Msa1294730:intron 50.0%
ACCGCTCTATTCGAAACCGA+CGG + chr8_3:52528770-52528789 None:intergenic 50.0%
!! GGGCTGTTTTATCCTGGAGA+CGG - chr8_3:52528894-52528913 Msa1294730:intron 50.0%
! GCACTACCCTAGTTTGTGCA+AGG + chr8_3:52528936-52528955 None:intergenic 50.0%
TTATTGGGTGAGTCACGACC+AGG + chr8_3:52528983-52529002 None:intergenic 50.0%
TTACGACAAAGAGGACCGAG+TGG - chr8_3:52529753-52529772 Msa1294730:CDS 50.0%
AGATTGACTGCGACGGTCAA+GGG - chr8_3:52529776-52529795 Msa1294730:CDS 50.0%
CATACCTGCAACACTAGGAG+GGG + chr8_3:52529922-52529941 None:intergenic 50.0%
GTGGAGGAGACAAAGAGAGA+TGG + chr8_3:52530940-52530959 None:intergenic 50.0%
TCTCTCTTTGTCTCCTCCAC+TGG - chr8_3:52530940-52530959 Msa1294730:intron 50.0%
AATTAGGACGAGTCCAGTGG+AGG + chr8_3:52530956-52530975 None:intergenic 50.0%
! TGTTGCAGTTGGAGCTTTGG+AGG - chr8_3:52531003-52531022 Msa1294730:intron 50.0%
TGAAGCATAAATGTGGGGGG+TGG - chr8_3:52531034-52531053 Msa1294730:intron 50.0%
GAAGCATAAATGTGGGGGGT+GGG - chr8_3:52531035-52531054 Msa1294730:intron 50.0%
AAGCATAAATGTGGGGGGTG+GGG - chr8_3:52531036-52531055 Msa1294730:intron 50.0%
GAGGAGTCTCACTAGGTGTT+GGG - chr8_3:52531273-52531292 Msa1294730:intron 50.0%
! TATCTAGCGGATGGAGCTTC+TGG - chr8_3:52531305-52531324 Msa1294730:intron 50.0%
!! AATGGGTTGTGGTGGATCAC+GGG + chr8_3:52531417-52531436 None:intergenic 50.0%
GGGCTGTTGTGGAATCTTCA+TGG + chr8_3:52531471-52531490 None:intergenic 50.0%
GTTACATTCTCTGAGCCAGG+GGG + chr8_3:52531491-52531510 None:intergenic 50.0%
GTTGCAACCTCCACTTCCAT+CGG - chr8_3:52531703-52531722 Msa1294730:intron 50.0%
TTGCAACCTCCACTTCCATC+GGG - chr8_3:52531704-52531723 Msa1294730:intron 50.0%
AAGTAACCCGATGGAAGTGG+AGG + chr8_3:52531713-52531732 None:intergenic 50.0%
CCACTTCCATCGGGTTACTT+CGG - chr8_3:52531713-52531732 Msa1294730:intron 50.0%
ACATTGCCGAAGTAACCCGA+TGG + chr8_3:52531722-52531741 None:intergenic 50.0%
! AGGCCAATTTTCATGGGACC+TGG - chr8_3:52531989-52532008 Msa1294730:intron 50.0%
! GGCCAATTTTCATGGGACCT+GGG - chr8_3:52531990-52532009 Msa1294730:intron 50.0%
! GCCAATTTTCATGGGACCTG+GGG - chr8_3:52531991-52532010 Msa1294730:intron 50.0%
GACGCAGAAGGGGTGATTGT+AGG - chr8_3:52527696-52527715 Msa1294730:CDS 55.0%
! CGCGTTTTACGCGTGACTTG+GGG + chr8_3:52528510-52528529 None:intergenic 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG + chr8_3:52528605-52528624 None:intergenic 55.0%
GGAGAAGAGAGAAACCGCAC+AGG + chr8_3:52528664-52528683 None:intergenic 55.0%
TCGAAACCGACGGGACAGAA+AGG + chr8_3:52528760-52528779 None:intergenic 55.0%
CCGCTCTATTCGAAACCGAC+GGG + chr8_3:52528769-52528788 None:intergenic 55.0%
!! CCCGTCGGTTTCGAATAGAG+CGG - chr8_3:52528766-52528785 Msa1294730:intron 55.0%
CGGTTACGTACCGTATCGAG+TGG - chr8_3:52528786-52528805 Msa1294730:intron 55.0%
! GTTTTATCCTGGAGACGGCG+TGG - chr8_3:52528899-52528918 Msa1294730:intron 55.0%
GATGGTGCAACCATCAGAGG+AGG - chr8_3:52529555-52529574 Msa1294730:intron 55.0%
TGTCGTGCAACCTCCTCTGA+TGG + chr8_3:52529568-52529587 None:intergenic 55.0%
AGAGGAGGTTGCACGACAGA+GGG - chr8_3:52529570-52529589 Msa1294730:intron 55.0%
CGTCGCAGTCAATCTCCACT+CGG + chr8_3:52529771-52529790 None:intergenic 55.0%
CGAGTGGAGATTGACTGCGA+CGG - chr8_3:52529769-52529788 Msa1294730:CDS 55.0%
GAGATTGACTGCGACGGTCA+AGG - chr8_3:52529775-52529794 Msa1294730:CDS 55.0%
GATTGACTGCGACGGTCAAG+GGG - chr8_3:52529777-52529796 Msa1294730:CDS 55.0%
GTATCCCCTCCTAGTGTTGC+AGG - chr8_3:52529915-52529934 Msa1294730:CDS 55.0%
GGTATCTCGCAGCAGAGATG+AGG + chr8_3:52530906-52530925 None:intergenic 55.0%
TCTGCTGCGAGATACCTCAC+CGG - chr8_3:52530910-52530929 Msa1294730:intron 55.0%
AGAGAGATGGTGTTCCGGTG+AGG + chr8_3:52530927-52530946 None:intergenic 55.0%
AGCATAAATGTGGGGGGTGG+GGG - chr8_3:52531037-52531056 Msa1294730:intron 55.0%
GGAGGAGTCTCACTAGGTGT+TGG - chr8_3:52531272-52531291 Msa1294730:intron 55.0%
AAGATTCCACAACAGCCCCC+TGG - chr8_3:52531473-52531492 Msa1294730:intron 55.0%
CCGAAGTAACCCGATGGAAG+TGG + chr8_3:52531716-52531735 None:intergenic 55.0%
GCCCCAGGTCCCATGAAAAT+TGG + chr8_3:52531995-52532014 None:intergenic 55.0%
TGATCGATGGGGAGGAGCAG+AGG + chr8_3:52527057-52527076 None:intergenic 60.0%
TAAGGGTGGGGTGACCTCCA+AGG - chr8_3:52528244-52528263 Msa1294730:CDS 60.0%
AAGGGTGGGGTGACCTCCAA+GGG - chr8_3:52528245-52528264 Msa1294730:CDS 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG - chr8_3:52528257-52528276 Msa1294730:CDS 60.0%
TATATCACGCGCGACGACGC+CGG - chr8_3:52528320-52528339 Msa1294730:intron 60.0%
CTAACAACCACGCCGTCTCC+AGG + chr8_3:52528909-52528928 None:intergenic 60.0%
CAGAGGAGGTTGCACGACAG+AGG - chr8_3:52529569-52529588 Msa1294730:intron 60.0%
AGGTTGCACGACAGAGGGTG+TGG - chr8_3:52529575-52529594 Msa1294730:intron 60.0%
ACGCTGGGCGTGTGCACATT+TGG + chr8_3:52529625-52529644 None:intergenic 60.0%
GCATAAATGTGGGGGGTGGG+GGG - chr8_3:52531038-52531057 Msa1294730:intron 60.0%
! GGGGGTGTAGATGGAGGAGA+TGG - chr8_3:52531062-52531081 Msa1294730:intron 60.0%
! GACCTCCAAGGGTGTGCCCT+TGG - chr8_3:52528256-52528275 Msa1294730:CDS 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG - chr8_3:52528258-52528277 Msa1294730:CDS 65.0%
! GTACCCCAAGGGCACACCCT+TGG + chr8_3:52528264-52528283 None:intergenic 65.0%
CCAAGACCCAAGCCCAAGCC+CGG + chr8_3:52528351-52528370 None:intergenic 65.0%
TAAATGTGGGGGGTGGGGGG+TGG - chr8_3:52531041-52531060 Msa1294730:intron 65.0%
AAATGTGGGGGGTGGGGGGT+GGG - chr8_3:52531042-52531061 Msa1294730:intron 65.0%
TCTGAGCCAGGGGGCTGTTG+TGG + chr8_3:52531482-52531501 None:intergenic 65.0%
! CCCCAAGGGCACACCCTTGG+AGG + chr8_3:52528261-52528280 None:intergenic 70.0%
CCGGGCTTGGGCTTGGGTCT+TGG - chr8_3:52528348-52528367 Msa1294730:intron 70.0%
AATGTGGGGGGTGGGGGGTG+GGG - chr8_3:52531043-52531062 Msa1294730:intron 70.0%
! GTGGGGGGTGGGGGTGTAGA+TGG - chr8_3:52531053-52531072 Msa1294730:intron 70.0%
! GGGGGTGGGGGTGTAGATGG+AGG - chr8_3:52531056-52531075 Msa1294730:intron 70.0%
ACCCAAGCCCAAGCCCGGCC+CGG + chr8_3:52528346-52528365 None:intergenic 75.0%
ATGTGGGGGGTGGGGGGTGG+GGG - chr8_3:52531044-52531063 Msa1294730:intron 75.0%
! TCACGCGCGACGACGCCGGC+CGG - chr8_3:52528324-52528343 Msa1294730:intron 80.0%
! AAGCCCAAGCCCGGCCCGGC+CGG + chr8_3:52528342-52528361 None:intergenic 80.0%
! GCCGGGCCGGGCTTGGGCTT+GGG - chr8_3:52528342-52528361 Msa1294730:intron 80.0%
! CACGCGCGACGACGCCGGCC+GGG - chr8_3:52528325-52528344 Msa1294730:intron 85.0%
! ACGCCGGCCGGGCCGGGCTT+GGG - chr8_3:52528336-52528355 Msa1294730:intron 85.0%
! GGCCGGGCCGGGCTTGGGCT+TGG - chr8_3:52528341-52528360 Msa1294730:intron 85.0%
! CGCGACGACGCCGGCCGGGC+CGG - chr8_3:52528329-52528348 Msa1294730:intron 90.0%
! GCGACGACGCCGGCCGGGCC+GGG - chr8_3:52528330-52528349 Msa1294730:intron 90.0%
! GACGCCGGCCGGGCCGGGCT+TGG - chr8_3:52528335-52528354 Msa1294730:intron 90.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 52527015 52532546 52527015 ID=Msa1294730;Name=Msa1294730
chr8_3 mRNA 52527015 52532546 52527015 ID=Msa1294730-mRNA-1;Parent=Msa1294730;Name=Msa1294730-mRNA-1;_AED=0.22;_eAED=0.22;_QI=105|1|1|1|0.5|0.33|3|411|429
chr8_3 exon 52527015 52528307 52527015 ID=Msa1294730-mRNA-1:exon:14930;Parent=Msa1294730-mRNA-1
chr8_3 exon 52529625 52530052 52529625 ID=Msa1294730-mRNA-1:exon:14929;Parent=Msa1294730-mRNA-1
chr8_3 exon 52532462 52532546 52532462 ID=Msa1294730-mRNA-1:exon:14928;Parent=Msa1294730-mRNA-1
chr8_3 five_prime_UTR 52532462 52532546 52532462 ID=Msa1294730-mRNA-1:five_prime_utr;Parent=Msa1294730-mRNA-1
chr8_3 five_prime_UTR 52530033 52530052 52530033 ID=Msa1294730-mRNA-1:five_prime_utr;Parent=Msa1294730-mRNA-1
chr8_3 CDS 52529625 52530032 52529625 ID=Msa1294730-mRNA-1:cds;Parent=Msa1294730-mRNA-1
chr8_3 CDS 52527426 52528307 52527426 ID=Msa1294730-mRNA-1:cds;Parent=Msa1294730-mRNA-1
chr8_3 three_prime_UTR 52527015 52527425 52527015 ID=Msa1294730-mRNA-1:three_prime_utr;Parent=Msa1294730-mRNA-1
Gene Sequence

>Msa1294730

ATGATCATAAATGTGAGAGATTCTAAGATGGTGCAACCATCAGAGGAGGTTGCACGACAGAGGGTGTGGATCTCCAATATTGATTTGAAGACGCCAAATGTGCACACGCCCAGCGTTTACTTCTATAGAACCAACACCATTTCCAAATTCTTCGACGCCAAGATTATGAAGAAAGCTCTCAGCAAGGTGCTTGTCTCATTCTATCCAATGGCAGGTCGTTTTTGTTACGACAAAGAGGACCGAGTGGAGATTGACTGCGACGGTCAAGGGGTGCTCTTTGTTGAAGCTGACACTGACTCATTCATAGATGATTTTGGTGACTTTGCTCCCACATTGCACTTGTGCAAACTTATTCCCATTGTTGATTACTCGCACGGAATTGGAACGTATCCCCTCCTAGTGTTGCAGGTAACATACTTCAAATGTGGAGGAGTCTCACTAGGTGTTGGGATGCACCATTATCTAGCGGATGGAGCTTCTGGTATTCACTTCATCAATACATGGTCAGATGTAACTCGCGGACTAGATGCTTCCATCCCACCATTTATTGATCGGACACTACTTCGTGCCCGTGATCCACCACAACCCATTTTTGATCACGTTGAATTCAAATCTTCACCATCCATGAAGATTCCACAACAGCCCCCTGGCTCAGAGAATGTAACAAGATCGATTTACAAATTGTCTCACGAACAACTCAACAAGTTGAAAGCTAAGTCCAAAGAAGTTGGCAACACAATCAACTACACCACTTATGAGATGTTAGCTGGTCATGTTTGGAGAAGTGTCTGCAAAGCAAGATCACTTCCCGATGATCAAGAAACCAAATTGTATATCCCAACAGATGGAAGATCAAGGTTGCAACCTCCACTTCCATCGGGTTACTTCGGCAATGTGATATTCTCAACCGCACCTATAGCTCTAGCAAGTGATCTCATGTCAAAACCAACATGGTATGCTGTAAGCAGAATTCACAATGCATTGTTGCGAATGGACGATGAATACATGAAATCTGCTATTGATTATCTAGAGTTACAACATGATATAACAACTATTTTCCGCAACGCTAATGTTAAGTGTCCAAATCTTGCGATCGTTAGTTGGGCAAAGTTTCCAATCTATGATGCTGATTTTGGTTGGGGAAGGCCAATTTTCATGGGACCTGGGGCTGATTGTGATGGACTGTCTTTTATAATTCCAAGCTCAACAAATGATGGGAGTTTATCTCTGGTAATTTCTCTTCAACATGAGCACATGGAAGTGTTTAAGGAATTGGTGTATGATATTTGA
Protein sequence

>Msa1294730

MIINVRDSKMVQPSEEVARQRVWISNIDLKTPNVHTPSVYFYRTNTISKFFDAKIMKKALSKVLVSFYPMAGRFCYDKEDRVEIDCDGQGVLFVEADTDSFIDDFGDFAPTLHLCKLIPIVDYSHGIGTYPLLVLQVTYFKCGGVSLGVGMHHYLADGASGIHFINTWSDVTRGLDASIPPFIDRTLLRARDPPQPIFDHVEFKSSPSMKIPQQPPGSENVTRSIYKLSHEQLNKLKAKSKEVGNTINYTTYEMLAGHVWRSVCKARSLPDDQETKLYIPTDGRSRLQPPLPSGYFGNVIFSTAPIALASDLMSKPTWYAVSRIHNALLRMDDEYMKSAIDYLELQHDITTIFRNANVKCPNLAIVSWAKFPIYDADFGWGRPIFMGPGADCDGLSFIIPSSTNDGSLSLVISLQHEHMEVFKELVYDI*