Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617650 | XP_003629600.2 | 94.700 | 434 | 23 | 0 | 1 | 434 | 1 | 434 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617650 | sp|Q9LIS1|CR26L_ARATH | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 9.81e-106 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0617650 | Msa0648180 | 0.804853 | 1.769550e-49 | -8.615850e-47 |
| Msa0617650 | Msa0656950 | 0.961119 | 2.473005e-119 | -8.615850e-47 |
| Msa0617650 | Msa0700610 | 0.958737 | 1.120376e-116 | -8.615850e-47 |
| Msa0617650 | Msa0700850 | 0.837067 | 6.467476e-57 | -8.615850e-47 |
| Msa0617650 | Msa0886880 | 0.804001 | 2.663777e-49 | -8.615850e-47 |
| Msa0617650 | Msa1129150 | 0.829648 | 4.576465e-55 | -8.615850e-47 |
| Msa0617650 | Msa1129440 | 0.804983 | 1.662020e-49 | -8.615850e-47 |
| Msa0617650 | Msa1129920 | 0.809377 | 1.950479e-50 | -8.615850e-47 |
| Msa0617650 | Msa1143380 | 0.994295 | 4.271179e-206 | -8.615850e-47 |
| Msa0617650 | Msa1178470 | 0.835343 | 1.773226e-56 | -8.615850e-47 |
| Msa0617650 | Msa1201710 | 0.820846 | 5.526951e-53 | -8.615850e-47 |
| Msa0617650 | Msa1208510 | 0.808330 | 3.265492e-50 | -8.615850e-47 |
| Msa0617650 | Msa1214730 | 0.855464 | 6.199924e-62 | -8.615850e-47 |
| Msa0617650 | Msa1214870 | 0.845866 | 3.108428e-59 | -8.615850e-47 |
| Msa0617650 | Msa1226110 | 0.802458 | 5.556408e-49 | -8.615850e-47 |
| Msa0617650 | Msa1275290 | 0.806743 | 7.094167e-50 | -8.615850e-47 |
| Msa0617650 | Msa1294730 | 0.833132 | 6.355999e-56 | -8.615850e-47 |
| Msa0617650 | Msa1300850 | 0.847206 | 1.339400e-59 | -8.615850e-47 |
| Msa0617650 | Msa1330240 | 0.805395 | 1.362611e-49 | -8.615850e-47 |
| Msa0617650 | Msa1369860 | 0.811477 | 6.865544e-51 | -8.615850e-47 |
| Msa0184070 | Msa0617650 | 0.813231 | 2.841879e-51 | -8.615850e-47 |
| Msa0224700 | Msa0617650 | 0.804361 | 2.241369e-49 | -8.615850e-47 |
| Msa0467890 | Msa0617650 | 0.801036 | 1.087942e-48 | -8.615850e-47 |
| Msa0467970 | Msa0617650 | 0.803100 | 4.096277e-49 | -8.615850e-47 |
| Msa0485910 | Msa0617650 | 0.808716 | 2.701077e-50 | -8.615850e-47 |
| Msa0514280 | Msa0617650 | 0.830174 | 3.406204e-55 | -8.615850e-47 |
| Msa0554420 | Msa0617650 | 0.802373 | 5.786299e-49 | -8.615850e-47 |
| Msa0564150 | Msa0617650 | 0.963783 | 1.647964e-122 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617650 | MtrunA17_Chr8g0378151 | 94.700 | 434 | 23 | 0 | 1 | 434 | 1 | 434 | 0.0 | 853 |
| Msa0617650 | MtrunA17_Chr2g0298091 | 41.429 | 420 | 227 | 8 | 16 | 423 | 16 | 428 | 3.40e-99 | 303 |
| Msa0617650 | MtrunA17_Chr3g0132831 | 38.278 | 418 | 244 | 8 | 16 | 423 | 15 | 428 | 2.33e-94 | 291 |
| Msa0617650 | MtrunA17_Chr1g0163441 | 37.198 | 414 | 242 | 7 | 30 | 431 | 32 | 439 | 5.49e-89 | 277 |
| Msa0617650 | MtrunA17_Chr1g0148851 | 24.876 | 402 | 283 | 9 | 37 | 419 | 30 | 431 | 8.20e-28 | 114 |
| Msa0617650 | MtrunA17_Chr7g0274021 | 24.888 | 446 | 290 | 13 | 6 | 419 | 5 | 437 | 1.08e-27 | 114 |
| Msa0617650 | MtrunA17_Chr4g0001861 | 30.964 | 197 | 116 | 3 | 1 | 196 | 10 | 187 | 1.79e-17 | 84.3 |
| Msa0617650 | MtrunA17_Chr2g0334001 | 31.034 | 203 | 108 | 7 | 1 | 196 | 10 | 187 | 3.80e-16 | 80.1 |
| Msa0617650 | MtrunA17_Chr7g0224391 | 30.726 | 179 | 121 | 2 | 20 | 196 | 24 | 201 | 2.37e-15 | 77.8 |
| Msa0617650 | MtrunA17_Chr8g0386141 | 31.169 | 154 | 103 | 2 | 46 | 196 | 39 | 192 | 7.22e-15 | 76.3 |
| Msa0617650 | MtrunA17_Chr3g0087401 | 25.954 | 262 | 169 | 7 | 37 | 278 | 26 | 282 | 2.79e-14 | 74.3 |
| Msa0617650 | MtrunA17_Chr7g0273791 | 30.075 | 133 | 91 | 1 | 49 | 179 | 49 | 181 | 2.65e-13 | 71.6 |
| Msa0617650 | MtrunA17_Chr8g0371821 | 24.000 | 250 | 178 | 5 | 43 | 284 | 34 | 279 | 6.43e-13 | 70.1 |
| Msa0617650 | MtrunA17_Chr4g0004691 | 30.882 | 136 | 87 | 3 | 61 | 190 | 49 | 183 | 3.68e-12 | 65.1 |
| Msa0617650 | MtrunA17_Chr3g0132001 | 30.519 | 154 | 104 | 2 | 46 | 196 | 46 | 199 | 4.48e-12 | 67.8 |
| Msa0617650 | MtrunA17_Chr7g0273721 | 32.374 | 139 | 88 | 4 | 46 | 179 | 45 | 182 | 3.20e-11 | 65.1 |
| Msa0617650 | MtrunA17_Chr7g0273761 | 28.358 | 134 | 93 | 2 | 49 | 179 | 421 | 554 | 5.12e-11 | 65.1 |
| Msa0617650 | MtrunA17_Chr5g0433641 | 30.827 | 133 | 90 | 1 | 49 | 179 | 49 | 181 | 6.03e-11 | 64.3 |
| Msa0617650 | MtrunA17_Chr8g0376901 | 21.300 | 446 | 283 | 17 | 19 | 425 | 10 | 426 | 8.14e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617650 | AT3G23840.1 | 42.494 | 433 | 228 | 10 | 1 | 429 | 1 | 416 | 9.97e-107 | 322 |
| Msa0617650 | AT4G13840.1 | 39.019 | 428 | 250 | 6 | 5 | 429 | 7 | 426 | 4.12e-105 | 318 |
| Msa0617650 | AT4G24510.1 | 34.192 | 427 | 250 | 11 | 12 | 423 | 6 | 416 | 1.92e-83 | 262 |
| Msa0617650 | AT2G19070.1 | 26.634 | 413 | 249 | 19 | 38 | 407 | 29 | 430 | 4.18e-18 | 86.7 |
| Msa0617650 | AT4G29250.1 | 24.091 | 440 | 268 | 17 | 19 | 419 | 27 | 439 | 1.53e-17 | 85.1 |
| Msa0617650 | AT5G48930.1 | 24.291 | 247 | 178 | 4 | 35 | 274 | 25 | 269 | 2.69e-14 | 74.7 |
| Msa0617650 | AT5G41040.1 | 33.962 | 159 | 99 | 3 | 46 | 201 | 65 | 220 | 3.65e-14 | 74.7 |
| Msa0617650 | AT5G41040.2 | 33.962 | 159 | 99 | 3 | 46 | 201 | 49 | 204 | 3.69e-14 | 74.3 |
| Msa0617650 | AT5G63560.1 | 30.636 | 173 | 104 | 5 | 43 | 199 | 27 | 199 | 1.64e-13 | 72.4 |
| Msa0617650 | AT3G48720.1 | 30.323 | 155 | 104 | 3 | 46 | 196 | 41 | 195 | 2.80e-13 | 71.6 |
| Msa0617650 | AT5G57840.1 | 25.101 | 247 | 179 | 3 | 35 | 275 | 25 | 271 | 4.58e-13 | 71.2 |
| Msa0617650 | AT1G65450.1 | 27.049 | 244 | 167 | 6 | 46 | 278 | 51 | 294 | 5.07e-12 | 67.8 |
Find 142 sgRNAs with CRISPR-Local
Find 437 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTAGTTGATTGTAAATT+TGG | 0.111021 | 4_2:-68290442 | Msa0617650:three_prime_UTR |
| ACAACTTGCAAGAACAAATT+TGG | 0.140491 | 4_2:-68291101 | Msa0617650:CDS |
| TGACACTAGTTTGAAAATTT+TGG | 0.151455 | 4_2:-68290881 | Msa0617650:CDS |
| GTCTCAACACCCCTTAATTT+TGG | 0.157335 | 4_2:-68291240 | Msa0617650:CDS |
| CCTTAGCTGGGCCCATGTTA+TGG | 0.166786 | 4_2:-68291355 | Msa0617650:CDS |
| AAACTTTATGTGCAATAATT+TGG | 0.180735 | 4_2:-68291047 | Msa0617650:CDS |
| CTTAGCTGGGCCCATGTTAT+GGG | 0.193486 | 4_2:-68291354 | Msa0617650:CDS |
| CTTCAGATTTCATCAACTTA+TGG | 0.205690 | 4_2:-68291317 | Msa0617650:CDS |
| CCTCATTAACGGTGTGTTTA+TGG | 0.210576 | 4_2:-68290417 | Msa0617650:three_prime_UTR |
| GGATTTCATTGGGCCTTAGC+TGG | 0.223582 | 4_2:-68291368 | Msa0617650:CDS |
| GTTCTTGCAAGTTGTTCATT+AGG | 0.260077 | 4_2:+68291109 | None:intergenic |
| TGTTAGTTGATTGTAAATTT+GGG | 0.292985 | 4_2:-68290441 | Msa0617650:three_prime_UTR |
| TTCAGATTTCATCAACTTAT+GGG | 0.298539 | 4_2:-68291316 | Msa0617650:CDS |
| TGGTAGGGGCAATGATATAA+TGG | 0.301115 | 4_2:-68290956 | Msa0617650:CDS |
| AAGCTTAATAACCACTAGTA+TGG | 0.301349 | 4_2:-68297406 | Msa0617650:exon |
| TCATCCCTTGCGGCCGATTC+CGG | 0.304819 | 4_2:-68297158 | Msa0617650:CDS |
| TGATGAAAGAAATCAAATTA+TGG | 0.305939 | 4_2:-68290833 | Msa0617650:CDS |
| ATATCATTGCCCCTACCATT+AGG | 0.319594 | 4_2:+68290961 | None:intergenic |
| TTCTTGCAAGTTGTTCATTA+GGG | 0.331603 | 4_2:+68291110 | None:intergenic |
| AAGCCATTCATCTAGAGTTT+TGG | 0.331771 | 4_2:+68297065 | None:intergenic |
| CTCGTTTCTCAACAAGTCAT+TGG | 0.333685 | 4_2:-68297012 | Msa0617650:CDS |
| TGTGTATGACTTAAAATTAA+AGG | 0.335448 | 4_2:-68290728 | Msa0617650:CDS |
| TTTAAGATAGTGAAGTTTCA+TGG | 0.343891 | 4_2:+68297269 | None:intergenic |
| GGGAGATGAAGGTGTTGTTT+TGG | 0.345479 | 4_2:-68290665 | Msa0617650:CDS |
| TTCATCTTCTGGCAATATAA+TGG | 0.352304 | 4_2:+68290603 | None:intergenic |
| TTGACCCGGTTGGTGATCAT+TGG | 0.353117 | 4_2:-68291185 | Msa0617650:CDS |
| CAACTTGCAAGAACAAATTT+GGG | 0.358829 | 4_2:-68291100 | Msa0617650:CDS |
| TTAAAGAACCTGCAACAAAA+TGG | 0.359088 | 4_2:+68296966 | None:intergenic |
| TATCATTGCCCCTACCATTA+GGG | 0.360008 | 4_2:+68290962 | None:intergenic |
| CGATTCCGGCGATCGGAATC+TGG | 0.360082 | 4_2:-68297144 | Msa0617650:CDS |
| GAAGGAGAAAATGATAATTC+TGG | 0.360908 | 4_2:+68296988 | None:intergenic |
| AGTGTGTAGTAAACAAATCT+TGG | 0.364561 | 4_2:+68290697 | None:intergenic |
| TTGAGAAACGAGCAACTTGT+AGG | 0.365130 | 4_2:+68297023 | None:intergenic |
| AACTGTCACGGTTGTGGGTT+CGG | 0.365252 | 4_2:+68290996 | None:intergenic |
| GTTGGGCCAGGTCATGCCAC+TGG | 0.366990 | 4_2:-68297330 | Msa0617650:CDS |
| AAGTGTGGTGGGATTTCATT+GGG | 0.369203 | 4_2:-68291378 | Msa0617650:CDS |
| AGGAACCAGCTACATTTAAA+CGG | 0.370152 | 4_2:-68291209 | Msa0617650:CDS |
| TTGAAAGATACAAGAGGCTT+TGG | 0.372426 | 4_2:+68297451 | None:intergenic |
| TAAGTCAAGAAATGTCAAAT+TGG | 0.372854 | 4_2:+68290762 | None:intergenic |
| AGGGGTGTTGAGACGGATCT+TGG | 0.389004 | 4_2:+68291249 | None:intergenic |
| TTTGGTGCAATTGGCCTCAA+TGG | 0.403810 | 4_2:+68297083 | None:intergenic |
| TTTGTTTACTACACACTTCA+AGG | 0.403996 | 4_2:-68290691 | Msa0617650:CDS |
| AGATGAATGGCTTGCTATGA+TGG | 0.415307 | 4_2:-68297055 | Msa0617650:CDS |
| TAAATTTGGGGCCTCATTAA+CGG | 0.417528 | 4_2:-68290428 | Msa0617650:three_prime_UTR |
| GTGTATGACTTAAAATTAAA+GGG | 0.419239 | 4_2:-68290727 | Msa0617650:CDS |
| GTTCGGATCCTTCTCGAACT+CGG | 0.421086 | 4_2:+68291013 | None:intergenic |
| TCGACAAACTGTCACGGTTG+TGG | 0.425168 | 4_2:+68290990 | None:intergenic |
| GGTAGGGGCAATGATATAAT+GGG | 0.427066 | 4_2:-68290955 | Msa0617650:CDS |
| GATTTCATTGGGCCTTAGCT+GGG | 0.427691 | 4_2:-68291367 | Msa0617650:CDS |
| CAGATTCCGATCGCCGGAAT+CGG | 0.429202 | 4_2:+68297145 | None:intergenic |
| GGTTATTAAGCTTATAAGAA+AGG | 0.429802 | 4_2:+68297416 | None:intergenic |
| TATATTGCCAGAAGATGAAA+TGG | 0.440744 | 4_2:-68290599 | Msa0617650:CDS |
| ATTGCACATAAAGTTTCAAA+TGG | 0.442525 | 4_2:+68291054 | None:intergenic |
| CACATAAAGTTTCAAATGGA+GGG | 0.442722 | 4_2:+68291058 | None:intergenic |
| CGACAAACTGTCACGGTTGT+GGG | 0.445047 | 4_2:+68290991 | None:intergenic |
| TCGTTTCTCAACAAGTCATT+GGG | 0.447263 | 4_2:-68297011 | Msa0617650:CDS |
| GGAACCAGCTACATTTAAAC+GGG | 0.448779 | 4_2:-68291208 | Msa0617650:CDS |
| CCTAAGGTGAATGATATTGA+TGG | 0.452041 | 4_2:-68290637 | Msa0617650:CDS |
| TTCGGATCCTTCTCGAACTC+GGG | 0.459230 | 4_2:+68291014 | None:intergenic |
| CCTCAACCTTGCATATCAAT+TGG | 0.459576 | 4_2:+68290926 | None:intergenic |
| TAAGTGTGGTGGGATTTCAT+TGG | 0.465833 | 4_2:-68291379 | Msa0617650:CDS |
| GCTAGCATGCTTGTGGATCA+AGG | 0.466138 | 4_2:-68290859 | Msa0617650:CDS |
| AAGGTCTCTTTCTCTTCTTG+TGG | 0.466828 | 4_2:+68297378 | None:intergenic |
| TTAGCTGGGCCCATGTTATG+GGG | 0.467497 | 4_2:-68291353 | Msa0617650:CDS |
| AAATCCGAGCTTAATGTGTA+TGG | 0.468103 | 4_2:-68290568 | Msa0617650:CDS |
| CTTCAAGGGGTGGGAGATGA+AGG | 0.469388 | 4_2:-68290676 | Msa0617650:CDS |
| AGGTCTCTTTCTCTTCTTGT+GGG | 0.470309 | 4_2:+68297379 | None:intergenic |
| GTGTGTAGTAAACAAATCTT+GGG | 0.472684 | 4_2:+68290698 | None:intergenic |
| CCATCAATATCATTCACCTT+AGG | 0.474137 | 4_2:+68290637 | None:intergenic |
| GGGATCCAATGATCACCAAC+CGG | 0.475921 | 4_2:+68291180 | None:intergenic |
| ATGGCCAGGTCCAAACCGTT+CGG | 0.477197 | 4_2:+68297288 | None:intergenic |
| GATAGTGAAGTTTCATGGCC+AGG | 0.479627 | 4_2:+68297274 | None:intergenic |
| GAAACTTCACTATCTTAAAG+TGG | 0.479693 | 4_2:-68297265 | Msa0617650:CDS |
| GACGGATCTTGGAATGTTGA+AGG | 0.485139 | 4_2:+68291260 | None:intergenic |
| AACAATTAAGAAAATAAAAG+AGG | 0.487357 | 4_2:-68297208 | Msa0617650:CDS |
| ATTTGAGAGTATCTTCAGTT+GGG | 0.488025 | 4_2:-68297347 | Msa0617650:CDS |
| GGAGGGGTTTGTTCAACACT+TGG | 0.494342 | 4_2:+68291075 | None:intergenic |
| TACATTTAAACGGGTTGACC+CGG | 0.497184 | 4_2:-68291199 | Msa0617650:CDS |
| GTTTGTCGACCCGACCCTAA+TGG | 0.497568 | 4_2:-68290976 | Msa0617650:CDS |
| CCATAACATGGGCCCAGCTA+AGG | 0.499246 | 4_2:+68291355 | None:intergenic |
| TCAACCCGTTTAAATGTAGC+TGG | 0.502437 | 4_2:+68291204 | None:intergenic |
| AATGGCTTGCTATGATGGAT+TGG | 0.507896 | 4_2:-68297050 | Msa0617650:CDS |
| TTGCGGCCGATTCCGGCGAT+CGG | 0.508580 | 4_2:-68297151 | Msa0617650:CDS |
| GCACCAAAACTCTAGATGAA+TGG | 0.514485 | 4_2:-68297068 | Msa0617650:CDS |
| TTGATATGCAAGGTTGAGGC+AGG | 0.515574 | 4_2:-68290922 | Msa0617650:CDS |
| AGAGTATCTTCAGTTGGGCC+AGG | 0.515864 | 4_2:-68297342 | Msa0617650:CDS |
| CAATCCGAACGGTTTGGACC+TGG | 0.517626 | 4_2:-68297292 | Msa0617650:CDS |
| TCCGACCCAGTGGCATGACC+TGG | 0.523816 | 4_2:+68297324 | None:intergenic |
| GCACATAAAGTTTCAAATGG+AGG | 0.536084 | 4_2:+68291057 | None:intergenic |
| GTCGACCAGATTCCGATCGC+CGG | 0.538465 | 4_2:+68297139 | None:intergenic |
| TACTACACACTTCAAGGGGT+GGG | 0.539191 | 4_2:-68290685 | Msa0617650:CDS |
| TTAACGGTGTGTTTATGGCA+TGG | 0.540258 | 4_2:-68290412 | Msa0617650:three_prime_UTR |
| TCGACCCGACCCTAATGGTA+GGG | 0.545566 | 4_2:-68290971 | Msa0617650:CDS |
| GATCGCCGGAATCGGCCGCA+AGG | 0.546043 | 4_2:+68297153 | None:intergenic |
| TTGTTTACTACACACTTCAA+GGG | 0.547045 | 4_2:-68290690 | Msa0617650:CDS |
| TAACTCAATTTAAGTGTGGT+GGG | 0.547840 | 4_2:-68291389 | Msa0617650:CDS |
| TTGGGCCAGGTCATGCCACT+GGG | 0.547919 | 4_2:-68297329 | Msa0617650:CDS |
| GTGTATGGTATCATGTTTGA+GGG | 0.549776 | 4_2:-68290553 | Msa0617650:CDS |
| TTGCCCCTACCATTAGGGTC+GGG | 0.551150 | 4_2:+68290967 | None:intergenic |
| ATCGCCGGAATCGGCCGCAA+GGG | 0.554171 | 4_2:+68297154 | None:intergenic |
| GATTTGAGAGTATCTTCAGT+TGG | 0.555245 | 4_2:-68297348 | Msa0617650:CDS |
| TACTCTCAAATCGTACACTA+AGG | 0.557317 | 4_2:+68297359 | None:intergenic |
| ACATAAAGTTTCAAATGGAG+GGG | 0.558070 | 4_2:+68291059 | None:intergenic |
| GCCAGGTCATGCCACTGGGT+CGG | 0.558921 | 4_2:-68297325 | Msa0617650:CDS |
| GTTAGTTGATTGTAAATTTG+GGG | 0.560723 | 4_2:-68290440 | Msa0617650:three_prime_UTR |
| ATTGCCCCTACCATTAGGGT+CGG | 0.561243 | 4_2:+68290966 | None:intergenic |
| GTAACTCAATTTAAGTGTGG+TGG | 0.561280 | 4_2:-68291390 | Msa0617650:CDS |
| CCATAAACACACCGTTAATG+AGG | 0.561910 | 4_2:+68290417 | None:intergenic |
| TGTGTATGGTATCATGTTTG+AGG | 0.561998 | 4_2:-68290554 | Msa0617650:CDS |
| AAAATTAAGGGGTGTTGAGA+CGG | 0.562724 | 4_2:+68291242 | None:intergenic |
| TTTGACTCTGAGGCCGCACA+AGG | 0.563433 | 4_2:-68297234 | Msa0617650:CDS |
| CTTAATTGTTAGGCCTTGTG+CGG | 0.564584 | 4_2:+68297221 | None:intergenic |
| TAGCTGGGCCCATGTTATGG+GGG | 0.565629 | 4_2:-68291352 | Msa0617650:CDS |
| CCAATTGATATGCAAGGTTG+AGG | 0.574004 | 4_2:-68290926 | Msa0617650:CDS |
| TCAGATTTCATCAACTTATG+GGG | 0.579204 | 4_2:-68291315 | Msa0617650:CDS |
| CAGGTAACTCAATTTAAGTG+TGG | 0.580586 | 4_2:-68291393 | Msa0617650:CDS |
| TCATTAGGGAGCTAGTTATG+TGG | 0.584575 | 4_2:+68291124 | None:intergenic |
| ATGAAATCTGAAGCTGAATG+TGG | 0.593595 | 4_2:+68291327 | None:intergenic |
| GTCGACCCGACCCTAATGGT+AGG | 0.594252 | 4_2:-68290972 | Msa0617650:CDS |
| TTTAAACGGGTTGACCCGGT+TGG | 0.594712 | 4_2:-68291195 | Msa0617650:CDS |
| AGAACCTGCAACAAAATGGA+AGG | 0.600774 | 4_2:+68296970 | None:intergenic |
| GGATCCAATGATCACCAACC+GGG | 0.601111 | 4_2:+68291181 | None:intergenic |
| TTCGTCAAGTGCAATGATTG+TGG | 0.601190 | 4_2:-68297114 | Msa0617650:CDS |
| CAATCATTGCACTTGACGAA+GGG | 0.602139 | 4_2:+68297117 | None:intergenic |
| GATTATTATTTCATCCCTTG+CGG | 0.605065 | 4_2:-68297168 | Msa0617650:CDS |
| TTGTGGGAAAACCATACTAG+TGG | 0.606482 | 4_2:+68297395 | None:intergenic |
| TTACTACACACTTCAAGGGG+TGG | 0.606615 | 4_2:-68290686 | Msa0617650:CDS |
| CGACCCGACCCTAATGGTAG+GGG | 0.607530 | 4_2:-68290970 | Msa0617650:CDS |
| GGTTTACTTCTTTGACTCTG+AGG | 0.609658 | 4_2:-68297244 | Msa0617650:CDS |
| ACGGATCTTGGAATGTTGAA+GGG | 0.614481 | 4_2:+68291261 | None:intergenic |
| ACAATCATTGCACTTGACGA+AGG | 0.615639 | 4_2:+68297116 | None:intergenic |
| TGTTTACTACACACTTCAAG+GGG | 0.616578 | 4_2:-68290689 | Msa0617650:CDS |
| TAGGGAGCTAGTTATGTGGA+AGG | 0.620633 | 4_2:+68291128 | None:intergenic |
| TGCATAGCCCGAGTTCGAGA+AGG | 0.625715 | 4_2:-68291021 | Msa0617650:CDS |
| GATACCATACACATTAAGCT+CGG | 0.633143 | 4_2:+68290564 | None:intergenic |
| GAAACGAGCAACTTGTAGGA+AGG | 0.635824 | 4_2:+68297027 | None:intergenic |
| AAATGACCAATTGATATGCA+AGG | 0.646231 | 4_2:-68290932 | Msa0617650:CDS |
| TTGTGGAGCAAGAACCATTG+AGG | 0.669130 | 4_2:-68297097 | Msa0617650:CDS |
| AACTTGCAAGAACAAATTTG+GGG | 0.669322 | 4_2:-68291099 | Msa0617650:CDS |
| GTCGGGTCGACAAACTGTCA+CGG | 0.691405 | 4_2:+68290984 | None:intergenic |
| TGAAATCTGAAGCTGAATGT+GGG | 0.702970 | 4_2:+68291328 | None:intergenic |
| AATTTGTTGAAAGATACAAG+AGG | 0.703489 | 4_2:+68297445 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATAATAATTTTTTTTTTA+AGG | + | chr4_2:68294868-68294887 | None:intergenic | 0.0% |
| !! | TATCATTAAATATTTGATTA+AGG | + | chr4_2:68290906-68290925 | None:intergenic | 10.0% |
| !! | TATTAATTATTAGAGTTTAA+TGG | - | chr4_2:68291119-68291138 | Msa0617650:CDS | 10.0% |
| !! | ATTAAAAATATTAATTGATG+TGG | - | chr4_2:68291209-68291228 | Msa0617650:CDS | 10.0% |
| !!! | CTCAAATTAAATTTTTAATT+TGG | - | chr4_2:68291919-68291938 | Msa0617650:intron | 10.0% |
| !!! | AATTAAATTTTTAATTTGGA+AGG | - | chr4_2:68291923-68291942 | Msa0617650:intron | 10.0% |
| !!! | TTTTTATTTTTATTTTACAG+AGG | + | chr4_2:68291960-68291979 | None:intergenic | 10.0% |
| !! | ATAAAAAGTAAATCATTTAT+TGG | - | chr4_2:68292390-68292409 | Msa0617650:intron | 10.0% |
| !!! | ATACATTGATTTTTTTTTTT+TGG | + | chr4_2:68292621-68292640 | None:intergenic | 10.0% |
| !!! | ATTTGATATGAAATTTTTTT+AGG | + | chr4_2:68293039-68293058 | None:intergenic | 10.0% |
| !!! | ACTTTTTAAAAGTTAAAAAA+TGG | - | chr4_2:68294338-68294357 | Msa0617650:intron | 10.0% |
| !! | TAATAAAAACTTACTATTAA+AGG | + | chr4_2:68294488-68294507 | None:intergenic | 10.0% |
| !!! | TATTTATATTTTCAAAATGT+TGG | - | chr4_2:68294729-68294748 | Msa0617650:intron | 10.0% |
| !! | AAAATGAAGAAAATAAAAAA+TGG | - | chr4_2:68294760-68294779 | Msa0617650:intron | 10.0% |
| !!! | TTAAATGTTTTAATTTTTTC+AGG | - | chr4_2:68294989-68295008 | Msa0617650:intron | 10.0% |
| !!! | TTAAACATATTTTTTTTTGA+AGG | - | chr4_2:68295305-68295324 | Msa0617650:intron | 10.0% |
| !! | AAAATATTAAACATATTTAG+AGG | - | chr4_2:68295328-68295347 | Msa0617650:intron | 10.0% |
| !! | AAATATTAAACATATTTAGA+GGG | - | chr4_2:68295329-68295348 | Msa0617650:intron | 10.0% |
| !!! | TTTTTACTTAAATTTTGTTA+AGG | + | chr4_2:68295733-68295752 | None:intergenic | 10.0% |
| !!! | CTTTTATTTTCTTAATTGTT+AGG | + | chr4_2:68290609-68290628 | None:intergenic | 15.0% |
| !! | AACAATTAAGAAAATAAAAG+AGG | - | chr4_2:68290609-68290628 | Msa0617650:CDS | 15.0% |
| !!! | GTAATTTTAAATGTTTTGAT+TGG | - | chr4_2:68291231-68291250 | Msa0617650:CDS | 15.0% |
| !!! | CATATTTTAAGCTAAAATAT+TGG | + | chr4_2:68291468-68291487 | None:intergenic | 15.0% |
| !!! | CAATATTTTAGCTTAAAATA+TGG | - | chr4_2:68291466-68291485 | Msa0617650:intron | 15.0% |
| !!! | AATCTCTATTTTTTATTGAT+AGG | - | chr4_2:68292142-68292161 | Msa0617650:intron | 15.0% |
| !! | AGAATTCTTAAAAATTGTTT+CGG | - | chr4_2:68292686-68292705 | Msa0617650:intron | 15.0% |
| !!! | GTTGAATTGAATTTTAAATT+AGG | + | chr4_2:68292811-68292830 | None:intergenic | 15.0% |
| !! | AACACTTTAATTAATATGAA+TGG | - | chr4_2:68293188-68293207 | Msa0617650:intron | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_2:68293472-68293491 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_2:68293471-68293490 | Msa0617650:intron | 15.0% |
| !!! | AATAAATAAGGGTATAATAA+TGG | - | chr4_2:68294114-68294133 | Msa0617650:intron | 15.0% |
| !! | AAAAATAATAAATGTTGCAT+TGG | - | chr4_2:68294140-68294159 | Msa0617650:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | - | chr4_2:68294181-68294200 | Msa0617650:intron | 15.0% |
| !! | AGTGATTAATTTCTAAATTT+AGG | + | chr4_2:68294568-68294587 | None:intergenic | 15.0% |
| !! | TTAATAAAACTTACTATTAC+AGG | - | chr4_2:68294634-68294653 | Msa0617650:intron | 15.0% |
| !!! | TTTGTTATAATTGAATTAGA+TGG | - | chr4_2:68295554-68295573 | Msa0617650:intron | 15.0% |
| !!! | TTTTGATTAGTTTTTATAGA+AGG | - | chr4_2:68296100-68296119 | Msa0617650:intron | 15.0% |
| !!! | TTTGATTAGTTTTTATAGAA+GGG | - | chr4_2:68296101-68296120 | Msa0617650:intron | 15.0% |
| !!! | ATGTGCAAAATTGTTTTAAA+CGG | - | chr4_2:68291258-68291277 | Msa0617650:CDS | 20.0% |
| !!! | TTTTAACCAAAATTCACTTT+TGG | + | chr4_2:68291327-68291346 | None:intergenic | 20.0% |
| !!! | TATTTTAGCTTAAAATATGG+AGG | - | chr4_2:68291469-68291488 | Msa0617650:intron | 20.0% |
| !!! | ATTTTAGCTTAAAATATGGA+GGG | - | chr4_2:68291470-68291489 | Msa0617650:intron | 20.0% |
| !!! | ATTTGAAAATCTGATAGTTT+TGG | + | chr4_2:68291497-68291516 | None:intergenic | 20.0% |
| !! | CTGAAAATAGTTTATGTAAA+TGG | + | chr4_2:68292025-68292044 | None:intergenic | 20.0% |
| !! | TAAAGTTCTTAAAAAATGTC+TGG | + | chr4_2:68292526-68292545 | None:intergenic | 20.0% |
| !!! | TTTTTTTGGTTACATTAAAG+AGG | + | chr4_2:68292607-68292626 | None:intergenic | 20.0% |
| !!! | CACTTTTAAACTCTAAATTT+TGG | + | chr4_2:68292873-68292892 | None:intergenic | 20.0% |
| !! | AAAATTCCATAACTACAATT+AGG | + | chr4_2:68292977-68292996 | None:intergenic | 20.0% |
| !!! | TTGTAGTTATGGAATTTTAT+TGG | - | chr4_2:68292979-68292998 | Msa0617650:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_2:68293481-68293500 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_2:68293558-68293577 | Msa0617650:intron | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr4_2:68293691-68293710 | Msa0617650:intron | 20.0% |
| !! | GATAAATAAACATTTACCTA+CGG | - | chr4_2:68293882-68293901 | Msa0617650:intron | 20.0% |
| !! | TGGATGAAATTCAATAAATA+AGG | - | chr4_2:68294102-68294121 | Msa0617650:intron | 20.0% |
| !! | GGATGAAATTCAATAAATAA+GGG | - | chr4_2:68294103-68294122 | Msa0617650:intron | 20.0% |
| !! | ATTTAAACCTTGATAAATGT+GGG | + | chr4_2:68294818-68294837 | None:intergenic | 20.0% |
| !! | AATTTAAACCTTGATAAATG+TGG | + | chr4_2:68294819-68294838 | None:intergenic | 20.0% |
| !!! | GCATCTCAATTTTTTTTAAA+AGG | + | chr4_2:68294901-68294920 | None:intergenic | 20.0% |
| !! | TTGAAACTAGAAGAAAATTA+TGG | + | chr4_2:68295077-68295096 | None:intergenic | 20.0% |
| !!! | TACTTAAATTTTGTTAAGGA+GGG | + | chr4_2:68295729-68295748 | None:intergenic | 20.0% |
| !!! | TTACTTAAATTTTGTTAAGG+AGG | + | chr4_2:68295730-68295749 | None:intergenic | 20.0% |
| !! | ACAAAAACTGTATTGTATAT+TGG | - | chr4_2:68296209-68296228 | Msa0617650:intron | 20.0% |
| !!! | TTGAGTACTTATATTCTTTT+AGG | - | chr4_2:68296242-68296261 | Msa0617650:intron | 20.0% |
| !! | AAACTTTATGTGCAATAATT+TGG | - | chr4_2:68296770-68296789 | Msa0617650:intron | 20.0% |
| !! | TGATGAAAGAAATCAAATTA+TGG | - | chr4_2:68296984-68297003 | Msa0617650:CDS | 20.0% |
| !! | ATATAGTAGAAAAAGATCAA+GGG | - | chr4_2:68297007-68297026 | Msa0617650:CDS | 20.0% |
| !! | TGTGTATGACTTAAAATTAA+AGG | - | chr4_2:68297089-68297108 | Msa0617650:CDS | 20.0% |
| !! | GTGTATGACTTAAAATTAAA+GGG | - | chr4_2:68297090-68297109 | Msa0617650:CDS | 20.0% |
| !! | ATGTTAGTTGATTGTAAATT+TGG | - | chr4_2:68297375-68297394 | Msa0617650:CDS | 20.0% |
| !! | TGTTAGTTGATTGTAAATTT+GGG | - | chr4_2:68297376-68297395 | Msa0617650:CDS | 20.0% |
| !!! | AATTTGTTGAAAGATACAAG+AGG | + | chr4_2:68290375-68290394 | None:intergenic | 25.0% |
| ! | GGTTATTAAGCTTATAAGAA+AGG | + | chr4_2:68290404-68290423 | None:intergenic | 25.0% |
| !! | TTTAAGATAGTGAAGTTTCA+TGG | + | chr4_2:68290551-68290570 | None:intergenic | 25.0% |
| ! | ATAATTAATATCACTCCCTA+AGG | + | chr4_2:68291109-68291128 | None:intergenic | 25.0% |
| ! | TTATTAGAGTTTAATGGTAG+TGG | - | chr4_2:68291125-68291144 | Msa0617650:CDS | 25.0% |
| ! | TATTAGAGTTTAATGGTAGT+GGG | - | chr4_2:68291126-68291145 | Msa0617650:CDS | 25.0% |
| ! | GCGTAATAATAAGAGTTTAA+TGG | + | chr4_2:68291295-68291314 | None:intergenic | 25.0% |
| !!! | ATGTTACCATTTTGTTGATT+TGG | + | chr4_2:68291527-68291546 | None:intergenic | 25.0% |
| ! | AATCAACAAAATGGTAACAT+TGG | - | chr4_2:68291527-68291546 | Msa0617650:intron | 25.0% |
| !!! | AGGTTTACACAATGTTTTTT+TGG | + | chr4_2:68291725-68291744 | None:intergenic | 25.0% |
| ! | TAATGAATTCAAAGTTACAG+AGG | + | chr4_2:68291994-68292013 | None:intergenic | 25.0% |
| !!! | AGACATTTTAACACTTTACA+AGG | - | chr4_2:68292043-68292062 | Msa0617650:intron | 25.0% |
| !! | ATAAATGAGATTGATTTCGA+CGG | - | chr4_2:68292231-68292250 | Msa0617650:intron | 25.0% |
| !!! | AATGGATTGGGAAAATAATT+GGG | + | chr4_2:68292439-68292458 | None:intergenic | 25.0% |
| !!! | AAATGGATTGGGAAAATAAT+TGG | + | chr4_2:68292440-68292459 | None:intergenic | 25.0% |
| !! | CATAAAAAGTGAAATGGATT+GGG | + | chr4_2:68292451-68292470 | None:intergenic | 25.0% |
| ! | TGAATGTAGTAGTACTATAA+TGG | + | chr4_2:68292753-68292772 | None:intergenic | 25.0% |
| !!! | AACAGTTAATTTGTTGAACT+TGG | - | chr4_2:68292828-68292847 | Msa0617650:intron | 25.0% |
| ! | ATATCGTCAAAATATATGCA+AGG | + | chr4_2:68292953-68292972 | None:intergenic | 25.0% |
| ! | GATATTCCTAATTGTAGTTA+TGG | - | chr4_2:68292968-68292987 | Msa0617650:intron | 25.0% |
| ! | GGGAACTATTAATAAGAAAT+TGG | + | chr4_2:68293121-68293140 | None:intergenic | 25.0% |
| ! | TGAACTTACTTAATTGGATA+GGG | + | chr4_2:68293143-68293162 | None:intergenic | 25.0% |
| ! | ATTCTATGATGACAAATTGT+TGG | + | chr4_2:68293258-68293277 | None:intergenic | 25.0% |
| ! | AATAGTCTCACCAAATTAAA+TGG | - | chr4_2:68293280-68293299 | Msa0617650:intron | 25.0% |
| !!! | AAACGACACTCATTTTAAAA+CGG | + | chr4_2:68293389-68293408 | None:intergenic | 25.0% |
| !!! | TTTAAAATGAGTGTCGTTTT+AGG | - | chr4_2:68293390-68293409 | Msa0617650:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr4_2:68293743-68293762 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr4_2:68293744-68293763 | None:intergenic | 25.0% |
| ! | TAAAATCGTCAAGATTACAA+CGG | + | chr4_2:68293799-68293818 | None:intergenic | 25.0% |
| ! | GTAAATGTTTATTTATCCGT+AGG | + | chr4_2:68293879-68293898 | None:intergenic | 25.0% |
| ! | CAGTAAAATAGTTGAATTCT+AGG | - | chr4_2:68293920-68293939 | Msa0617650:intron | 25.0% |
| !!! | TCCTTTTTTTCCAAATTTTG+AGG | - | chr4_2:68294004-68294023 | Msa0617650:intron | 25.0% |
| ! | AAGAGACAATTAATATGAGA+CGG | - | chr4_2:68294206-68294225 | Msa0617650:intron | 25.0% |
| !!! | AAAATACTAAGAGTGTCTTT+AGG | - | chr4_2:68294251-68294270 | Msa0617650:intron | 25.0% |
| !!! | AAATACTAAGAGTGTCTTTA+GGG | - | chr4_2:68294252-68294271 | Msa0617650:intron | 25.0% |
| ! | AAAAATGTGGTATTGTGAAA+TGG | - | chr4_2:68294297-68294316 | Msa0617650:intron | 25.0% |
| !! | CAATACCCTTTTAAACTAAA+GGG | - | chr4_2:68294425-68294444 | Msa0617650:intron | 25.0% |
| !! | CATTTCCCTTTAGTTTAAAA+GGG | + | chr4_2:68294433-68294452 | None:intergenic | 25.0% |
| !! | ACATTTCCCTTTAGTTTAAA+AGG | + | chr4_2:68294434-68294453 | None:intergenic | 25.0% |
| ! | AAATGTTAACGAGTATCTTT+GGG | - | chr4_2:68294448-68294467 | Msa0617650:intron | 25.0% |
| ! | TTGAAAACACTCATTAACAA+AGG | + | chr4_2:68294530-68294549 | None:intergenic | 25.0% |
| ! | AATGTTAACAAGTTCTTTCT+GGG | + | chr4_2:68294673-68294692 | None:intergenic | 25.0% |
| ! | AAATGTTAACAAGTTCTTTC+TGG | + | chr4_2:68294674-68294693 | None:intergenic | 25.0% |
| ! | TACAATAATGTGATACTTGA+TGG | + | chr4_2:68294711-68294730 | None:intergenic | 25.0% |
| ! | GAAGAAAATAAAAAATGGAG+AGG | - | chr4_2:68294765-68294784 | Msa0617650:intron | 25.0% |
| !!! | ATTATGGCAGTTTTTAAAAC+AGG | + | chr4_2:68295061-68295080 | None:intergenic | 25.0% |
| ! | AACTAGGAACAAAATATTGT+CGG | - | chr4_2:68295114-68295133 | Msa0617650:intron | 25.0% |
| ! | AGCAAAATTTCAACAAAGTT+TGG | + | chr4_2:68295183-68295202 | None:intergenic | 25.0% |
| ! | AGAAATTTAAAGAATCTCAG+TGG | + | chr4_2:68295234-68295253 | None:intergenic | 25.0% |
| ! | AGCATTTCTCATATATGAAT+AGG | - | chr4_2:68295358-68295377 | Msa0617650:intron | 25.0% |
| ! | ATTAGATTGAAGAAAATACG+TGG | - | chr4_2:68295966-68295985 | Msa0617650:intron | 25.0% |
| ! | TGATCCATCAATTAATGTTA+GGG | - | chr4_2:68296056-68296075 | Msa0617650:intron | 25.0% |
| ! | TTCAGATTTCATCAACTTAT+GGG | - | chr4_2:68296501-68296520 | Msa0617650:intron | 25.0% |
| ! | ATTGCACATAAAGTTTCAAA+TGG | + | chr4_2:68296766-68296785 | None:intergenic | 25.0% |
| !!! | TGACACTAGTTTGAAAATTT+TGG | - | chr4_2:68296936-68296955 | Msa0617650:intron | 25.0% |
| ! | GATATAGTAGAAAAAGATCA+AGG | - | chr4_2:68297006-68297025 | Msa0617650:CDS | 25.0% |
| ! | TATAGTAGAAAAAGATCAAG+GGG | - | chr4_2:68297008-68297027 | Msa0617650:CDS | 25.0% |
| ! | TAAGTCAAGAAATGTCAAAT+TGG | + | chr4_2:68297058-68297077 | None:intergenic | 25.0% |
| ! | GTTAGTTGATTGTAAATTTG+GGG | - | chr4_2:68297377-68297396 | Msa0617650:CDS | 25.0% |
| AAGCTTAATAACCACTAGTA+TGG | - | chr4_2:68290411-68290430 | Msa0617650:three_prime_UTR | 30.0% | |
| !! | ATTTGAGAGTATCTTCAGTT+GGG | - | chr4_2:68290470-68290489 | Msa0617650:three_prime_UTR | 30.0% |
| GAAACTTCACTATCTTAAAG+TGG | - | chr4_2:68290552-68290571 | Msa0617650:CDS | 30.0% | |
| GATTATTATTTCATCCCTTG+CGG | - | chr4_2:68290649-68290668 | Msa0617650:CDS | 30.0% | |
| GAAGGAGAAAATGATAATTC+TGG | + | chr4_2:68290832-68290851 | None:intergenic | 30.0% | |
| TTAAAGAACCTGCAACAAAA+TGG | + | chr4_2:68290854-68290873 | None:intergenic | 30.0% | |
| TAGAGAGATGCATATGTATT+AGG | + | chr4_2:68290933-68290952 | None:intergenic | 30.0% | |
| ! | TTGTACGTGCAAAATTGTTT+TGG | + | chr4_2:68291160-68291179 | None:intergenic | 30.0% |
| ! | TTCTCTCCAAAAGTGAATTT+TGG | - | chr4_2:68291318-68291337 | Msa0617650:CDS | 30.0% |
| AGAAGACCAAATCAACAAAA+TGG | - | chr4_2:68291518-68291537 | Msa0617650:intron | 30.0% | |
| AACTAACTTCATCGTCTTTA+AGG | - | chr4_2:68291623-68291642 | Msa0617650:intron | 30.0% | |
| !!! | CCTTTCACTCTCATTTTTTA+TGG | + | chr4_2:68291879-68291898 | None:intergenic | 30.0% |
| CCATAAAAAATGAGAGTGAA+AGG | - | chr4_2:68291876-68291895 | Msa0617650:intron | 30.0% | |
| AGAGTGAAAGGAAAGTTAAA+AGG | - | chr4_2:68291888-68291907 | Msa0617650:intron | 30.0% | |
| GAGTGAAAGGAAAGTTAAAA+GGG | - | chr4_2:68291889-68291908 | Msa0617650:intron | 30.0% | |
| ATAGACTCTGTAATTTGAGT+GGG | + | chr4_2:68292182-68292201 | None:intergenic | 30.0% | |
| AATAGACTCTGTAATTTGAG+TGG | + | chr4_2:68292183-68292202 | None:intergenic | 30.0% | |
| TTACACTCTTATTAACCGAA+GGG | + | chr4_2:68292298-68292317 | None:intergenic | 30.0% | |
| ATTACACTCTTATTAACCGA+AGG | + | chr4_2:68292299-68292318 | None:intergenic | 30.0% | |
| ! | AGTAAATCATTTATTGGCCT+TGG | - | chr4_2:68292396-68292415 | Msa0617650:intron | 30.0% |
| CCATAAAAAGTGAAATGGAT+TGG | + | chr4_2:68292452-68292471 | None:intergenic | 30.0% | |
| !!! | CCAATCCATTTCACTTTTTA+TGG | - | chr4_2:68292449-68292468 | Msa0617650:intron | 30.0% |
| CTCTACCATAAAAAGTGAAA+TGG | + | chr4_2:68292457-68292476 | None:intergenic | 30.0% | |
| TGTAGTAGTACTATAATGGT+AGG | + | chr4_2:68292749-68292768 | None:intergenic | 30.0% | |
| !!! | GACGATATTCCTTTTTTTTG+TGG | - | chr4_2:68292905-68292924 | Msa0617650:intron | 30.0% |
| !!! | GATATTCCTTTTTTTTGTGG+TGG | - | chr4_2:68292908-68292927 | Msa0617650:intron | 30.0% |
| AAGAAATTGGTTGCAAATAC+CGG | + | chr4_2:68293108-68293127 | None:intergenic | 30.0% | |
| AACTTACTTAATTGGATAGG+GGG | + | chr4_2:68293141-68293160 | None:intergenic | 30.0% | |
| GAACTTACTTAATTGGATAG+GGG | + | chr4_2:68293142-68293161 | None:intergenic | 30.0% | |
| GTGAACTTACTTAATTGGAT+AGG | + | chr4_2:68293144-68293163 | None:intergenic | 30.0% | |
| GTTAGGTGAACTTACTTAAT+TGG | + | chr4_2:68293149-68293168 | None:intergenic | 30.0% | |
| TACATGACTTCTGTATGATT+TGG | + | chr4_2:68293220-68293239 | None:intergenic | 30.0% | |
| GAAGTCATGTACAGTATTTA+TGG | - | chr4_2:68293229-68293248 | Msa0617650:intron | 30.0% | |
| GGGTACTATACCATTTAATT+TGG | + | chr4_2:68293293-68293312 | None:intergenic | 30.0% | |
| GAAAGAAACTCCTAACTTTA+AGG | + | chr4_2:68293319-68293338 | None:intergenic | 30.0% | |
| ! | GAGTATTATTTAGAGTAGGA+GGG | + | chr4_2:68293363-68293382 | None:intergenic | 30.0% |
| ! | GATGGAGTATTATTTAGAGT+AGG | + | chr4_2:68293367-68293386 | None:intergenic | 30.0% |
| ! | AGTCGTTTAAGGTTTATACA+CGG | - | chr4_2:68293654-68293673 | Msa0617650:intron | 30.0% |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr4_2:68293740-68293759 | Msa0617650:intron | 30.0% | |
| AAAATCGTCAAGATTACAAC+GGG | + | chr4_2:68293798-68293817 | None:intergenic | 30.0% | |
| GTTAATTATACATTGTCCGT+AGG | + | chr4_2:68293901-68293920 | None:intergenic | 30.0% | |
| !!! | ACTAATTGTCATTTTTCCGT+AGG | + | chr4_2:68293952-68293971 | None:intergenic | 30.0% |
| GGAAAAATGACAATTAGTGA+CGG | - | chr4_2:68293954-68293973 | Msa0617650:intron | 30.0% | |
| GGAAAAAAAACTTGTACCTA+CGG | + | chr4_2:68293987-68294006 | None:intergenic | 30.0% | |
| GCCTCAAAATTTGGAAAAAA+AGG | + | chr4_2:68294008-68294027 | None:intergenic | 30.0% | |
| AGAAGACAGACATAAAAATG+TGG | - | chr4_2:68294284-68294303 | Msa0617650:intron | 30.0% | |
| TGTGAAATGGTTAAAAGTGA+TGG | - | chr4_2:68294310-68294329 | Msa0617650:intron | 30.0% | |
| TATTTACTTAACTAGTGCTC+CGG | - | chr4_2:68294389-68294408 | Msa0617650:intron | 30.0% | |
| ! | GCAATACCCTTTTAAACTAA+AGG | - | chr4_2:68294424-68294443 | Msa0617650:intron | 30.0% |
| GAAATGTTAACGAGTATCTT+TGG | - | chr4_2:68294447-68294466 | Msa0617650:intron | 30.0% | |
| CTAGTTTAGTTGCTATAACA+TGG | + | chr4_2:68295100-68295119 | None:intergenic | 30.0% | |
| CATGTTATAGCAACTAAACT+AGG | - | chr4_2:68295098-68295117 | Msa0617650:intron | 30.0% | |
| !! | TAATTATCCCAATTTGTTGC+TGG | - | chr4_2:68295141-68295160 | Msa0617650:intron | 30.0% |
| CATCTCTCATAAAAATGACA+AGG | + | chr4_2:68295464-68295483 | None:intergenic | 30.0% | |
| GGATAAGATGTACATAAGTA+CGG | + | chr4_2:68295609-68295628 | None:intergenic | 30.0% | |
| CACAAAAAGACAAAAAAGAG+AGG | + | chr4_2:68295630-68295649 | None:intergenic | 30.0% | |
| !! | TAAGAAAACTGAAAAGTGTC+AGG | + | chr4_2:68295692-68295711 | None:intergenic | 30.0% |
| GTGATCCATCAATTAATGTT+AGG | - | chr4_2:68296055-68296074 | Msa0617650:intron | 30.0% | |
| CTTTCCCTAACATTAATTGA+TGG | + | chr4_2:68296063-68296082 | None:intergenic | 30.0% | |
| CTTCAAGAATATTCAATGCA+TGG | + | chr4_2:68296377-68296396 | None:intergenic | 30.0% | |
| TAACTCAATTTAAGTGTGGT+GGG | - | chr4_2:68296428-68296447 | Msa0617650:intron | 30.0% | |
| CTTCAGATTTCATCAACTTA+TGG | - | chr4_2:68296500-68296519 | Msa0617650:intron | 30.0% | |
| TCAGATTTCATCAACTTATG+GGG | - | chr4_2:68296502-68296521 | Msa0617650:intron | 30.0% | |
| ! | TTTTAGGCTCAAATTGTTCA+AGG | + | chr4_2:68296533-68296552 | None:intergenic | 30.0% |
| ! | TTTTCGGATCCAAAATTAAG+GGG | + | chr4_2:68296589-68296608 | None:intergenic | 30.0% |
| ! | CTTTTCGGATCCAAAATTAA+GGG | + | chr4_2:68296590-68296609 | None:intergenic | 30.0% |
| !!! | TGTGTCCATTTTTTTGTTGT+TGG | + | chr4_2:68296665-68296684 | None:intergenic | 30.0% |
| TTCTTGCAAGTTGTTCATTA+GGG | + | chr4_2:68296710-68296729 | None:intergenic | 30.0% | |
| ACAACTTGCAAGAACAAATT+TGG | - | chr4_2:68296716-68296735 | Msa0617650:intron | 30.0% | |
| CAACTTGCAAGAACAAATTT+GGG | - | chr4_2:68296717-68296736 | Msa0617650:intron | 30.0% | |
| AACTTGCAAGAACAAATTTG+GGG | - | chr4_2:68296718-68296737 | Msa0617650:intron | 30.0% | |
| ACATAAAGTTTCAAATGGAG+GGG | + | chr4_2:68296761-68296780 | None:intergenic | 30.0% | |
| CACATAAAGTTTCAAATGGA+GGG | + | chr4_2:68296762-68296781 | None:intergenic | 30.0% | |
| AAATGACCAATTGATATGCA+AGG | - | chr4_2:68296885-68296904 | Msa0617650:intron | 30.0% | |
| !!! | GTGACTGATTTTTTTGTCTA+TGG | - | chr4_2:68297030-68297049 | Msa0617650:CDS | 30.0% |
| GTGTGTAGTAAACAAATCTT+GGG | + | chr4_2:68297122-68297141 | None:intergenic | 30.0% | |
| AGTGTGTAGTAAACAAATCT+TGG | + | chr4_2:68297123-68297142 | None:intergenic | 30.0% | |
| TTTGTTTACTACACACTTCA+AGG | - | chr4_2:68297126-68297145 | Msa0617650:CDS | 30.0% | |
| TTGTTTACTACACACTTCAA+GGG | - | chr4_2:68297127-68297146 | Msa0617650:CDS | 30.0% | |
| TTCATCTTCTGGCAATATAA+TGG | + | chr4_2:68297217-68297236 | None:intergenic | 30.0% | |
| TATATTGCCAGAAGATGAAA+TGG | - | chr4_2:68297218-68297237 | Msa0617650:CDS | 30.0% | |
| ! | AGTTTTACCATTTCATCTTC+TGG | + | chr4_2:68297228-68297247 | None:intergenic | 30.0% |
| TACTCTCAAATCGTACACTA+AGG | + | chr4_2:68290461-68290480 | None:intergenic | 35.0% | |
| !! | GATTTGAGAGTATCTTCAGT+TGG | - | chr4_2:68290469-68290488 | Msa0617650:three_prime_UTR | 35.0% |
| ! | GATGTTTTTCACAATCCGAA+CGG | - | chr4_2:68290514-68290533 | Msa0617650:three_prime_UTR | 35.0% |
| !! | ATCTAGAGTTTTGGTGCAAT+TGG | + | chr4_2:68290746-68290765 | None:intergenic | 35.0% |
| !! | AAGCCATTCATCTAGAGTTT+TGG | + | chr4_2:68290755-68290774 | None:intergenic | 35.0% |
| TCGTTTCTCAACAAGTCATT+GGG | - | chr4_2:68290806-68290825 | Msa0617650:CDS | 35.0% | |
| ! | AAGCCTGTAACCAATTTGTT+AGG | - | chr4_2:68291582-68291601 | Msa0617650:intron | 35.0% |
| TGACCTAACAAATTGGTTAC+AGG | + | chr4_2:68291588-68291607 | None:intergenic | 35.0% | |
| GTTAGCATGACCTAACAAAT+TGG | + | chr4_2:68291595-68291614 | None:intergenic | 35.0% | |
| !!! | CACAATGTTTTTTTGGTCAC+AGG | + | chr4_2:68291718-68291737 | None:intergenic | 35.0% |
| AACCTAAAGCCTGTAATGTA+AGG | - | chr4_2:68291740-68291759 | Msa0617650:intron | 35.0% | |
| TTCCTTACATTACAGGCTTT+AGG | + | chr4_2:68291745-68291764 | None:intergenic | 35.0% | |
| AAGCCTGTAATGTAAGGAAT+TGG | - | chr4_2:68291746-68291765 | Msa0617650:intron | 35.0% | |
| ACTGTCACATAAAGATTGAG+AGG | - | chr4_2:68291770-68291789 | Msa0617650:intron | 35.0% | |
| TAGACTCTGTAATTTGAGTG+GGG | + | chr4_2:68292181-68292200 | None:intergenic | 35.0% | |
| TACACTCTTATTAACCGAAG+GGG | + | chr4_2:68292297-68292316 | None:intergenic | 35.0% | |
| !! | AAAATAATTGGGTTGACGGT+CGG | + | chr4_2:68292428-68292447 | None:intergenic | 35.0% |
| !! | TGGGAAAATAATTGGGTTGA+CGG | + | chr4_2:68292432-68292451 | None:intergenic | 35.0% |
| TCAAAATATATGCAAGGTCC+GGG | + | chr4_2:68292947-68292966 | None:intergenic | 35.0% | |
| GTCAAAATATATGCAAGGTC+CGG | + | chr4_2:68292948-68292967 | None:intergenic | 35.0% | |
| AAAAGTAGCAGTGAGTAGTT+AGG | + | chr4_2:68293166-68293185 | None:intergenic | 35.0% | |
| ! | TGACTTCTGTATGATTTGGA+AGG | + | chr4_2:68293216-68293235 | None:intergenic | 35.0% |
| ! | AACTCCTAACTTTAAGGAGA+GGG | + | chr4_2:68293313-68293332 | None:intergenic | 35.0% |
| ! | AAACTCCTAACTTTAAGGAG+AGG | + | chr4_2:68293314-68293333 | None:intergenic | 35.0% |
| GAGTAGTAAAGTAGAGAACA+TGG | + | chr4_2:68293341-68293360 | None:intergenic | 35.0% | |
| ! | GGAGTATTATTTAGAGTAGG+AGG | + | chr4_2:68293364-68293383 | None:intergenic | 35.0% |
| !!! | GACACTCATTTTAAAACGGA+TGG | + | chr4_2:68293385-68293404 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr4_2:68293520-68293539 | Msa0617650:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_2:68293624-68293643 | Msa0617650:intron | 35.0% |
| ! | GTCGTTTAAGGTTTATACAC+GGG | - | chr4_2:68293655-68293674 | Msa0617650:intron | 35.0% |
| AGGTTTATACACGGGTATTA+AGG | - | chr4_2:68293663-68293682 | Msa0617650:intron | 35.0% | |
| AAATCGTCAAGATTACAACG+GGG | + | chr4_2:68293797-68293816 | None:intergenic | 35.0% | |
| ! | ACACACATGACTTTTACCTA+CGG | - | chr4_2:68293860-68293879 | Msa0617650:intron | 35.0% |
| ! | GAATTCTAGGCTTTTACCTA+CGG | - | chr4_2:68293933-68293952 | Msa0617650:intron | 35.0% |
| AGACAATTAATATGAGACGG+AGG | - | chr4_2:68294209-68294228 | Msa0617650:intron | 35.0% | |
| GACAATTAATATGAGACGGA+GGG | - | chr4_2:68294210-68294229 | Msa0617650:intron | 35.0% | |
| ATTTACTTAACTAGTGCTCC+GGG | - | chr4_2:68294390-68294409 | Msa0617650:intron | 35.0% | |
| AACAAAGTTTGGACATGAGA+TGG | + | chr4_2:68295172-68295191 | None:intergenic | 35.0% | |
| !!! | AACTGAAAAGTGTCAGGTTT+TGG | + | chr4_2:68295686-68295705 | None:intergenic | 35.0% |
| ATTGAAGAAAATACGTGGTG+TGG | - | chr4_2:68295971-68295990 | Msa0617650:intron | 35.0% | |
| !! | CTTATCTCTAGTCTTGTGAA+AGG | + | chr4_2:68296006-68296025 | None:intergenic | 35.0% |
| ACGTAGTACTCTATAACTGA+AGG | + | chr4_2:68296169-68296188 | None:intergenic | 35.0% | |
| !! | GAAAAGCATTCATAAGTCGT+TGG | - | chr4_2:68296396-68296415 | Msa0617650:intron | 35.0% |
| CAGGTAACTCAATTTAAGTG+TGG | - | chr4_2:68296424-68296443 | Msa0617650:intron | 35.0% | |
| GTAACTCAATTTAAGTGTGG+TGG | - | chr4_2:68296427-68296446 | Msa0617650:intron | 35.0% | |
| ! | TGAAATCTGAAGCTGAATGT+GGG | + | chr4_2:68296492-68296511 | None:intergenic | 35.0% |
| ! | ATGAAATCTGAAGCTGAATG+TGG | + | chr4_2:68296493-68296512 | None:intergenic | 35.0% |
| !! | AAAATTAAGGGGTGTTGAGA+CGG | + | chr4_2:68296578-68296597 | None:intergenic | 35.0% |
| ! | CCTTTTCGGATCCAAAATTA+AGG | + | chr4_2:68296591-68296610 | None:intergenic | 35.0% |
| ! | CCTTAATTTTGGATCCGAAA+AGG | - | chr4_2:68296588-68296607 | Msa0617650:intron | 35.0% |
| !! | AAATGTAGCTGGTTCCTTTT+CGG | + | chr4_2:68296605-68296624 | None:intergenic | 35.0% |
| AGGAACCAGCTACATTTAAA+CGG | - | chr4_2:68296608-68296627 | Msa0617650:intron | 35.0% | |
| !!! | CCATTTTTTTGTTGTTGGCT+GGG | + | chr4_2:68296660-68296679 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTTGTTGTTGGC+TGG | + | chr4_2:68296661-68296680 | None:intergenic | 35.0% |
| GTTCTTGCAAGTTGTTCATT+AGG | + | chr4_2:68296711-68296730 | None:intergenic | 35.0% | |
| GCACATAAAGTTTCAAATGG+AGG | + | chr4_2:68296763-68296782 | None:intergenic | 35.0% | |
| TGTTTACTACACACTTCAAG+GGG | - | chr4_2:68297128-68297147 | Msa0617650:CDS | 35.0% | |
| CCATCAATATCATTCACCTT+AGG | + | chr4_2:68297183-68297202 | None:intergenic | 35.0% | |
| CCTAAGGTGAATGATATTGA+TGG | - | chr4_2:68297180-68297199 | Msa0617650:CDS | 35.0% | |
| AAATCCGAGCTTAATGTGTA+TGG | - | chr4_2:68297249-68297268 | Msa0617650:CDS | 35.0% | |
| GATACCATACACATTAAGCT+CGG | + | chr4_2:68297256-68297275 | None:intergenic | 35.0% | |
| TGTGTATGGTATCATGTTTG+AGG | - | chr4_2:68297263-68297282 | Msa0617650:CDS | 35.0% | |
| GTGTATGGTATCATGTTTGA+GGG | - | chr4_2:68297264-68297283 | Msa0617650:CDS | 35.0% | |
| ! | TGAGGGTGACTTTTAATGAT+TGG | - | chr4_2:68297281-68297300 | Msa0617650:CDS | 35.0% |
| ! | TAAATTTGGGGCCTCATTAA+CGG | - | chr4_2:68297389-68297408 | Msa0617650:CDS | 35.0% |
| TTGTGGGAAAACCATACTAG+TGG | + | chr4_2:68290425-68290444 | None:intergenic | 40.0% | |
| AGGTCTCTTTCTCTTCTTGT+GGG | + | chr4_2:68290441-68290460 | None:intergenic | 40.0% | |
| AAGGTCTCTTTCTCTTCTTG+TGG | + | chr4_2:68290442-68290461 | None:intergenic | 40.0% | |
| ! | TTTTCACAATCCGAACGGTT+TGG | - | chr4_2:68290519-68290538 | Msa0617650:three_prime_UTR | 40.0% |
| GGTTTACTTCTTTGACTCTG+AGG | - | chr4_2:68290573-68290592 | Msa0617650:CDS | 40.0% | |
| ! | CTTAATTGTTAGGCCTTGTG+CGG | + | chr4_2:68290599-68290618 | None:intergenic | 40.0% |
| CAATCATTGCACTTGACGAA+GGG | + | chr4_2:68290703-68290722 | None:intergenic | 40.0% | |
| ACAATCATTGCACTTGACGA+AGG | + | chr4_2:68290704-68290723 | None:intergenic | 40.0% | |
| TTCGTCAAGTGCAATGATTG+TGG | - | chr4_2:68290703-68290722 | Msa0617650:CDS | 40.0% | |
| GCACCAAAACTCTAGATGAA+TGG | - | chr4_2:68290749-68290768 | Msa0617650:CDS | 40.0% | |
| !! | AGATGAATGGCTTGCTATGA+TGG | - | chr4_2:68290762-68290781 | Msa0617650:CDS | 40.0% |
| !! | AATGGCTTGCTATGATGGAT+TGG | - | chr4_2:68290767-68290786 | Msa0617650:CDS | 40.0% |
| TTGAGAAACGAGCAACTTGT+AGG | + | chr4_2:68290797-68290816 | None:intergenic | 40.0% | |
| CTCGTTTCTCAACAAGTCAT+TGG | - | chr4_2:68290805-68290824 | Msa0617650:CDS | 40.0% | |
| ! | TTCTCCTTCCATTTTGTTGC+AGG | - | chr4_2:68290843-68290862 | Msa0617650:CDS | 40.0% |
| AGAACCTGCAACAAAATGGA+AGG | + | chr4_2:68290850-68290869 | None:intergenic | 40.0% | |
| TAATATCACTCCCTAAGGCA+AGG | + | chr4_2:68291104-68291123 | None:intergenic | 40.0% | |
| GTGCCAATTCCTTACATTAC+AGG | + | chr4_2:68291752-68291771 | None:intergenic | 40.0% | |
| ! | TTGAGAGGTGTAGTAGTAGT+TGG | - | chr4_2:68291785-68291804 | Msa0617650:intron | 40.0% |
| ACACTCTTATTAACCGAAGG+GGG | + | chr4_2:68292296-68292315 | None:intergenic | 40.0% | |
| !!! | TTCCTTTTTTTTGTGGTGGC+CGG | - | chr4_2:68292912-68292931 | Msa0617650:intron | 40.0% |
| CAAAATATATGCAAGGTCCG+GGG | + | chr4_2:68292946-68292965 | None:intergenic | 40.0% | |
| AGTACCCTCTCCTTAAAGTT+AGG | - | chr4_2:68293306-68293325 | Msa0617650:intron | 40.0% | |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr4_2:68293523-68293542 | Msa0617650:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_2:68293628-68293647 | Msa0617650:intron | 40.0% |
| ATTGTAGTTAGTGGAGTAGC+AGG | - | chr4_2:68293749-68293768 | Msa0617650:intron | 40.0% | |
| TTGTAGTTAGTGGAGTAGCA+GGG | - | chr4_2:68293750-68293769 | Msa0617650:intron | 40.0% | |
| CTTAAAGGGGCCTCAAAATT+TGG | + | chr4_2:68294017-68294036 | None:intergenic | 40.0% | |
| TCCAACTTAACTACTCCACA+GGG | + | chr4_2:68294086-68294105 | None:intergenic | 40.0% | |
| ATCCAACTTAACTACTCCAC+AGG | + | chr4_2:68294087-68294106 | None:intergenic | 40.0% | |
| !! | TAAGAGTGTCTTTAGGGCAT+TGG | - | chr4_2:68294258-68294277 | Msa0617650:intron | 40.0% |
| TTTACTTAACTAGTGCTCCG+GGG | - | chr4_2:68294391-68294410 | Msa0617650:intron | 40.0% | |
| AAATGTGGGACTGACCTTAA+TGG | + | chr4_2:68294804-68294823 | None:intergenic | 40.0% | |
| TTAGATGGCTAACAAGTTGC+TGG | - | chr4_2:68295569-68295588 | Msa0617650:intron | 40.0% | |
| TCACAAGACTAGAGATAAGC+TGG | - | chr4_2:68296007-68296026 | Msa0617650:intron | 40.0% | |
| ! | AAGCAACATGGACTTTGGAA+TGG | + | chr4_2:68296035-68296054 | None:intergenic | 40.0% |
| ATCACAAGCAACATGGACTT+TGG | + | chr4_2:68296040-68296059 | None:intergenic | 40.0% | |
| ! | TTGATGGATCACAAGCAACA+TGG | + | chr4_2:68296047-68296066 | None:intergenic | 40.0% |
| GGGCAACACAAATTGTTAAG+AGG | - | chr4_2:68296121-68296140 | Msa0617650:intron | 40.0% | |
| !!! | TCATAAGTCGTTGGTTTTGC+AGG | - | chr4_2:68296405-68296424 | Msa0617650:intron | 40.0% |
| ! | TAAGTGTGGTGGGATTTCAT+TGG | - | chr4_2:68296438-68296457 | Msa0617650:intron | 40.0% |
| ! | AAGTGTGGTGGGATTTCATT+GGG | - | chr4_2:68296439-68296458 | Msa0617650:intron | 40.0% |
| ! | GAATGTTGAAGGGCAGTTTT+AGG | + | chr4_2:68296549-68296568 | None:intergenic | 40.0% |
| ACGGATCTTGGAATGTTGAA+GGG | + | chr4_2:68296559-68296578 | None:intergenic | 40.0% | |
| ! | GTCTCAACACCCCTTAATTT+TGG | - | chr4_2:68296577-68296596 | Msa0617650:intron | 40.0% |
| GGAACCAGCTACATTTAAAC+GGG | - | chr4_2:68296609-68296628 | Msa0617650:intron | 40.0% | |
| TCAACCCGTTTAAATGTAGC+TGG | + | chr4_2:68296616-68296635 | None:intergenic | 40.0% | |
| !! | TACATTTAAACGGGTTGACC+CGG | - | chr4_2:68296618-68296637 | Msa0617650:intron | 40.0% |
| CCCAGCCAACAACAAAAAAA+TGG | - | chr4_2:68296657-68296676 | Msa0617650:intron | 40.0% | |
| TCATTAGGGAGCTAGTTATG+TGG | + | chr4_2:68296696-68296715 | None:intergenic | 40.0% | |
| TATCATTGCCCCTACCATTA+GGG | + | chr4_2:68296858-68296877 | None:intergenic | 40.0% | |
| ATATCATTGCCCCTACCATT+AGG | + | chr4_2:68296859-68296878 | None:intergenic | 40.0% | |
| TGGTAGGGGCAATGATATAA+TGG | - | chr4_2:68296861-68296880 | Msa0617650:intron | 40.0% | |
| GGTAGGGGCAATGATATAAT+GGG | - | chr4_2:68296862-68296881 | Msa0617650:intron | 40.0% | |
| CCTCAACCTTGCATATCAAT+TGG | + | chr4_2:68296894-68296913 | None:intergenic | 40.0% | |
| CCAATTGATATGCAAGGTTG+AGG | - | chr4_2:68296891-68296910 | Msa0617650:intron | 40.0% | |
| !!! | AATTTTGGCTAGCATGCTTG+TGG | - | chr4_2:68296951-68296970 | Msa0617650:intron | 40.0% |
| !!! | TGTTGTTTTGGTGCTTCCTA+AGG | - | chr4_2:68297164-68297183 | Msa0617650:CDS | 40.0% |
| CCATAAACACACCGTTAATG+AGG | + | chr4_2:68297403-68297422 | None:intergenic | 40.0% | |
| CCTCATTAACGGTGTGTTTA+TGG | - | chr4_2:68297400-68297419 | Msa0617650:exon | 40.0% | |
| TTAACGGTGTGTTTATGGCA+TGG | - | chr4_2:68297405-68297424 | Msa0617650:exon | 40.0% | |
| GATAGTGAAGTTTCATGGCC+AGG | + | chr4_2:68290546-68290565 | None:intergenic | 45.0% | |
| TTGTGGAGCAAGAACCATTG+AGG | - | chr4_2:68290720-68290739 | Msa0617650:CDS | 45.0% | |
| ! | TTTGGTGCAATTGGCCTCAA+TGG | + | chr4_2:68290737-68290756 | None:intergenic | 45.0% |
| GAAACGAGCAACTTGTAGGA+AGG | + | chr4_2:68290793-68290812 | None:intergenic | 45.0% | |
| TTTCGTACTCTCCTTGCCTT+AGG | - | chr4_2:68291090-68291109 | Msa0617650:CDS | 45.0% | |
| TTCGTACTCTCCTTGCCTTA+GGG | - | chr4_2:68291091-68291110 | Msa0617650:CDS | 45.0% | |
| AATTGAGAGAACACCCCCTT+CGG | - | chr4_2:68292280-68292299 | Msa0617650:intron | 45.0% | |
| !!! | TCCTTTTTTTTGTGGTGGCC+GGG | - | chr4_2:68292913-68292932 | Msa0617650:intron | 45.0% |
| CGACTCTAACACAATTTCGC+CGG | - | chr4_2:68293086-68293105 | Msa0617650:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_2:68293627-68293646 | Msa0617650:intron | 45.0% |
| ! | GTCATGTGTGTCACTCTAAG+TGG | + | chr4_2:68293851-68293870 | None:intergenic | 45.0% |
| !!! | TAGTGACGGATTTTGTCCGT+AGG | - | chr4_2:68293968-68293987 | Msa0617650:intron | 45.0% |
| ! | TTGAGGCCCCTTTAAGTTTG+AGG | - | chr4_2:68294021-68294040 | Msa0617650:intron | 45.0% |
| ACAGGGCCTCAAACTTAAAG+GGG | + | chr4_2:68294030-68294049 | None:intergenic | 45.0% | |
| CACAGGGCCTCAAACTTAAA+GGG | + | chr4_2:68294031-68294050 | None:intergenic | 45.0% | |
| GTATTGCTAACCAATGTCCC+CGG | + | chr4_2:68294411-68294430 | None:intergenic | 45.0% | |
| GATCTTAACCCCCTCCATTA+AGG | - | chr4_2:68294787-68294806 | Msa0617650:intron | 45.0% | |
| GGTCAGTCCCACATTTATCA+AGG | - | chr4_2:68294808-68294827 | Msa0617650:intron | 45.0% | |
| GGACAGACCAGCAACAAATT+GGG | + | chr4_2:68295151-68295170 | None:intergenic | 45.0% | |
| TGGACAGACCAGCAACAAAT+TGG | + | chr4_2:68295152-68295171 | None:intergenic | 45.0% | |
| ! | CTCAGTGGTGTCAATAGTGA+TGG | + | chr4_2:68295219-68295238 | None:intergenic | 45.0% |
| GATTTCATTGGGCCTTAGCT+GGG | - | chr4_2:68296450-68296469 | Msa0617650:intron | 45.0% | |
| GACGGATCTTGGAATGTTGA+AGG | + | chr4_2:68296560-68296579 | None:intergenic | 45.0% | |
| TAGGGAGCTAGTTATGTGGA+AGG | + | chr4_2:68296692-68296711 | None:intergenic | 45.0% | |
| TTGATATGCAAGGTTGAGGC+AGG | - | chr4_2:68296895-68296914 | Msa0617650:intron | 45.0% | |
| TTACTACACACTTCAAGGGG+TGG | - | chr4_2:68297131-68297150 | Msa0617650:CDS | 45.0% | |
| TACTACACACTTCAAGGGGT+GGG | - | chr4_2:68297132-68297151 | Msa0617650:CDS | 45.0% | |
| !!! | GGGAGATGAAGGTGTTGTTT+TGG | - | chr4_2:68297152-68297171 | Msa0617650:CDS | 45.0% |
| !!! | TGTTTTAAATAAAAATTTAA+AGG | - | chr4_2:68291363-68291382 | Msa0617650:CDS | 5.0% |
| !!! | TAAATATTTTTTACAAATTT+AGG | - | chr4_2:68292085-68292104 | Msa0617650:intron | 5.0% |
| !!! | AAATATTTTTTACAAATTTA+GGG | - | chr4_2:68292086-68292105 | Msa0617650:intron | 5.0% |
| ! | AGAGTATCTTCAGTTGGGCC+AGG | - | chr4_2:68290475-68290494 | Msa0617650:three_prime_UTR | 50.0% |
| GTGAAAAACATCCGACCCAG+TGG | + | chr4_2:68290506-68290525 | None:intergenic | 50.0% | |
| TCCCGGCCACCACAAAAAAA+AGG | + | chr4_2:68292917-68292936 | None:intergenic | 50.0% | |
| ACGGAGGGAGTAGTCGTTTA+AGG | - | chr4_2:68293643-68293662 | Msa0617650:intron | 50.0% | |
| GGCATCCGAATTGTCGAAGA+CGG | + | chr4_2:68293776-68293795 | None:intergenic | 50.0% | |
| GCACAGGGCCTCAAACTTAA+AGG | + | chr4_2:68294032-68294051 | None:intergenic | 50.0% | |
| TTGATGCTCTTGCACAGAGC+CGG | - | chr4_2:68294060-68294079 | Msa0617650:intron | 50.0% | |
| ACTTAACTACTCCACAGGGC+CGG | + | chr4_2:68294082-68294101 | None:intergenic | 50.0% | |
| GCCCTGTGGAGTAGTTAAGT+TGG | - | chr4_2:68294082-68294101 | Msa0617650:intron | 50.0% | |
| TGGGACTGACCTTAATGGAG+GGG | + | chr4_2:68294799-68294818 | None:intergenic | 50.0% | |
| GTGGGACTGACCTTAATGGA+GGG | + | chr4_2:68294800-68294819 | None:intergenic | 50.0% | |
| TGTGGGACTGACCTTAATGG+AGG | + | chr4_2:68294801-68294820 | None:intergenic | 50.0% | |
| ! | TGTGCATGAGAGTATGTGCG+AGG | - | chr4_2:68295646-68295665 | Msa0617650:intron | 50.0% |
| GGATTTCATTGGGCCTTAGC+TGG | - | chr4_2:68296449-68296468 | Msa0617650:intron | 50.0% | |
| CTTAGCTGGGCCCATGTTAT+GGG | - | chr4_2:68296463-68296482 | Msa0617650:intron | 50.0% | |
| TTAGCTGGGCCCATGTTATG+GGG | - | chr4_2:68296464-68296483 | Msa0617650:intron | 50.0% | |
| ATGTGGGTCCCCCATAACAT+GGG | + | chr4_2:68296476-68296495 | None:intergenic | 50.0% | |
| AATGTGGGTCCCCCATAACA+TGG | + | chr4_2:68296477-68296496 | None:intergenic | 50.0% | |
| !! | TTTAAACGGGTTGACCCGGT+TGG | - | chr4_2:68296622-68296641 | Msa0617650:intron | 50.0% |
| !! | TTGACCCGGTTGGTGATCAT+TGG | - | chr4_2:68296632-68296651 | Msa0617650:intron | 50.0% |
| GGATCCAATGATCACCAACC+GGG | + | chr4_2:68296639-68296658 | None:intergenic | 50.0% | |
| GGGATCCAATGATCACCAAC+CGG | + | chr4_2:68296640-68296659 | None:intergenic | 50.0% | |
| ! | GGAGGGGTTTGTTCAACACT+TGG | + | chr4_2:68296745-68296764 | None:intergenic | 50.0% |
| TTCGGATCCTTCTCGAACTC+GGG | + | chr4_2:68296806-68296825 | None:intergenic | 50.0% | |
| GTTCGGATCCTTCTCGAACT+CGG | + | chr4_2:68296807-68296826 | None:intergenic | 50.0% | |
| AACTGTCACGGTTGTGGGTT+CGG | + | chr4_2:68296824-68296843 | None:intergenic | 50.0% | |
| CGACAAACTGTCACGGTTGT+GGG | + | chr4_2:68296829-68296848 | None:intergenic | 50.0% | |
| TCGACAAACTGTCACGGTTG+TGG | + | chr4_2:68296830-68296849 | None:intergenic | 50.0% | |
| ATTGCCCCTACCATTAGGGT+CGG | + | chr4_2:68296854-68296873 | None:intergenic | 50.0% | |
| GCTAGCATGCTTGTGGATCA+AGG | - | chr4_2:68296958-68296977 | Msa0617650:intron | 50.0% | |
| ! | CAATCCGAACGGTTTGGACC+TGG | - | chr4_2:68290525-68290544 | Msa0617650:exon | 55.0% |
| ATGGCCAGGTCCAAACCGTT+CGG | + | chr4_2:68290532-68290551 | None:intergenic | 55.0% | |
| !! | TTTGACTCTGAGGCCGCACA+AGG | - | chr4_2:68290583-68290602 | Msa0617650:CDS | 55.0% |
| CAGATTCCGATCGCCGGAAT+CGG | + | chr4_2:68290675-68290694 | None:intergenic | 55.0% | |
| TTGACGGTCGGTCTCAACCA+AGG | + | chr4_2:68292416-68292435 | None:intergenic | 55.0% | |
| CAGGGCCGTCTTCGACAATT+CGG | - | chr4_2:68293768-68293787 | Msa0617650:intron | 55.0% | |
| ! | AAGTTTGAGGCCCTGTGCCA+CGG | - | chr4_2:68294034-68294053 | Msa0617650:intron | 55.0% |
| !! | GGCTCTGTGCAAGAGCATCA+AGG | + | chr4_2:68294061-68294080 | None:intergenic | 55.0% |
| AACTAGTGCTCCGGGGACAT+TGG | - | chr4_2:68294398-68294417 | Msa0617650:intron | 55.0% | |
| GGGACTGACCTTAATGGAGG+GGG | + | chr4_2:68294798-68294817 | None:intergenic | 55.0% | |
| CCATAACATGGGCCCAGCTA+AGG | + | chr4_2:68296465-68296484 | None:intergenic | 55.0% | |
| CCTTAGCTGGGCCCATGTTA+TGG | - | chr4_2:68296462-68296481 | Msa0617650:intron | 55.0% | |
| TAGCTGGGCCCATGTTATGG+GGG | - | chr4_2:68296465-68296484 | Msa0617650:intron | 55.0% | |
| !! | AGGGGTGTTGAGACGGATCT+TGG | + | chr4_2:68296571-68296590 | None:intergenic | 55.0% |
| TGCATAGCCCGAGTTCGAGA+AGG | - | chr4_2:68296796-68296815 | Msa0617650:intron | 55.0% | |
| GTCGGGTCGACAAACTGTCA+CGG | + | chr4_2:68296836-68296855 | None:intergenic | 55.0% | |
| GTTTGTCGACCCGACCCTAA+TGG | - | chr4_2:68296841-68296860 | Msa0617650:intron | 55.0% | |
| TCGACCCGACCCTAATGGTA+GGG | - | chr4_2:68296846-68296865 | Msa0617650:intron | 55.0% | |
| TTGCCCCTACCATTAGGGTC+GGG | + | chr4_2:68296853-68296872 | None:intergenic | 55.0% | |
| CTTCAAGGGGTGGGAGATGA+AGG | - | chr4_2:68297141-68297160 | Msa0617650:CDS | 55.0% | |
| TTGGGCCAGGTCATGCCACT+GGG | - | chr4_2:68290488-68290507 | Msa0617650:three_prime_UTR | 60.0% | |
| ! | TCATCCCTTGCGGCCGATTC+CGG | - | chr4_2:68290659-68290678 | Msa0617650:CDS | 60.0% |
| CGATTCCGGCGATCGGAATC+TGG | - | chr4_2:68290673-68290692 | Msa0617650:CDS | 60.0% | |
| GTCGACCAGATTCCGATCGC+CGG | + | chr4_2:68290681-68290700 | None:intergenic | 60.0% | |
| AAGGTCCGGGGTTCGAATCC+CGG | + | chr4_2:68292934-68292953 | None:intergenic | 60.0% | |
| ! | AGTTTGAGGCCCTGTGCCAC+GGG | - | chr4_2:68294035-68294054 | Msa0617650:intron | 60.0% |
| !! | TGCAAGAGCATCAAGGCCCG+TGG | + | chr4_2:68294054-68294073 | None:intergenic | 60.0% |
| GTCGACCCGACCCTAATGGT+AGG | - | chr4_2:68296845-68296864 | Msa0617650:intron | 60.0% | |
| CGACCCGACCCTAATGGTAG+GGG | - | chr4_2:68296847-68296866 | Msa0617650:intron | 60.0% | |
| GTTGGGCCAGGTCATGCCAC+TGG | - | chr4_2:68290487-68290506 | Msa0617650:three_prime_UTR | 65.0% | |
| GCCAGGTCATGCCACTGGGT+CGG | - | chr4_2:68290492-68290511 | Msa0617650:three_prime_UTR | 65.0% | |
| TCCGACCCAGTGGCATGACC+TGG | + | chr4_2:68290496-68290515 | None:intergenic | 65.0% | |
| ATCGCCGGAATCGGCCGCAA+GGG | + | chr4_2:68290666-68290685 | None:intergenic | 65.0% | |
| ! | TTGCGGCCGATTCCGGCGAT+CGG | - | chr4_2:68290666-68290685 | Msa0617650:CDS | 65.0% |
| GCATCAAGGCCCGTGGCACA+GGG | + | chr4_2:68294047-68294066 | None:intergenic | 65.0% | |
| AGCATCAAGGCCCGTGGCAC+AGG | + | chr4_2:68294048-68294067 | None:intergenic | 65.0% | |
| GATCGCCGGAATCGGCCGCA+AGG | + | chr4_2:68290667-68290686 | None:intergenic | 70.0% | |
| GGTGGCCGGGATTCGAACCC+CGG | - | chr4_2:68292926-68292945 | Msa0617650:intron | 70.0% | |
| CTTGCACAGAGCCGGCCCTG+TGG | - | chr4_2:68294068-68294087 | Msa0617650:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 68290368 | 68297471 | 68290368 | ID=Msa0617650;Name=Msa0617650 |
| chr4_2 | mRNA | 68290368 | 68297471 | 68290368 | ID=Msa0617650-mRNA-1;Parent=Msa0617650;Name=Msa0617650-mRNA-1;_AED=0.01;_eAED=0.01;_QI=62|1|1|1|1|1|2|175|434 |
| chr4_2 | exon | 68290368 | 68291412 | 68290368 | ID=Msa0617650-mRNA-1:exon:19616;Parent=Msa0617650-mRNA-1 |
| chr4_2 | exon | 68296975 | 68297471 | 68296975 | ID=Msa0617650-mRNA-1:exon:19615;Parent=Msa0617650-mRNA-1 |
| chr4_2 | five_prime_UTR | 68297410 | 68297471 | 68297410 | ID=Msa0617650-mRNA-1:five_prime_utr;Parent=Msa0617650-mRNA-1 |
| chr4_2 | CDS | 68296975 | 68297409 | 68296975 | ID=Msa0617650-mRNA-1:cds;Parent=Msa0617650-mRNA-1 |
| chr4_2 | CDS | 68290543 | 68291412 | 68290543 | ID=Msa0617650-mRNA-1:cds;Parent=Msa0617650-mRNA-1 |
| chr4_2 | three_prime_UTR | 68290368 | 68290542 | 68290368 | ID=Msa0617650-mRNA-1:three_prime_utr;Parent=Msa0617650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
