Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235970 | KEH18571.1 | 87.909 | 703 | 68 | 6 | 1 | 690 | 1 | 699 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0685620 | Msa1235970 | 0.829525 | 4.902876e-55 | -8.615850e-47 |
| Msa0193530 | Msa1235970 | 0.811534 | 6.673983e-51 | -8.615850e-47 |
| Msa0222160 | Msa1235970 | 0.831596 | 1.525867e-55 | -8.615850e-47 |
| Msa1235970 | Msa1237720 | 0.803793 | 2.941921e-49 | -8.615850e-47 |
| Msa1235970 | Msa1317920 | 0.822027 | 2.949817e-53 | -8.615850e-47 |
| Msa1235970 | Msa1317930 | 0.811003 | 8.698444e-51 | -8.615850e-47 |
| Msa0467310 | Msa1235970 | 0.832729 | 8.004379e-56 | -8.615850e-47 |
| Msa0263680 | Msa1235970 | 0.833483 | 5.196752e-56 | -8.615850e-47 |
| Msa0301590 | Msa1235970 | 0.800685 | 1.283651e-48 | -8.615850e-47 |
| Msa0338960 | Msa1235970 | 0.829832 | 4.127594e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235970 | MtrunA17_Chr8g0345931 | 87.892 | 702 | 69 | 6 | 1 | 690 | 1 | 698 | 0.0 | 1105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1235970 | AT4G00800.1 | 49.045 | 628 | 249 | 17 | 87 | 688 | 104 | 686 | 1.61e-143 | 461 |
| Msa1235970 | AT4G00800.2 | 64.897 | 339 | 116 | 3 | 351 | 688 | 2 | 338 | 1.04e-131 | 425 |
Find 177 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGCACCCGTTTCCATTTC+GGG | 0.110887 | 8_2:+14359655 | Msa1235970:CDS |
| AATTGGAATTGGAAAGTAAA+AGG | 0.248048 | 8_2:+14360514 | Msa1235970:CDS |
| ACCCGCACCCGTTTCCATTT+CGG | 0.259520 | 8_2:+14359654 | Msa1235970:CDS |
| CGTGAATTGGAGGAGAGATT+TGG | 0.269625 | 8_2:+14359958 | Msa1235970:CDS |
| TTTGATTATGTTGGTGATAA+TGG | 0.272951 | 8_2:+14360288 | Msa1235970:CDS |
| GTGAATTGGAGGAGAGATTT+GGG | 0.277950 | 8_2:+14359959 | Msa1235970:CDS |
| ATGTATTTCCATGCAGTATA+TGG | 0.315067 | 8_2:-14362210 | None:intergenic |
| CGCGTGTTCTCGTCGTTGTT+TGG | 0.328771 | 8_2:+14359724 | Msa1235970:CDS |
| GCATGGTTCTGCTCAAGTTT+TGG | 0.344730 | 8_2:+14360758 | Msa1235970:CDS |
| TGCGGGTTGAGGAAAGTTAA+TGG | 0.349578 | 8_2:-14359638 | None:intergenic |
| CTTCTTGATGGGCAAAATAC+TGG | 0.351848 | 8_2:+14361798 | Msa1235970:CDS |
| AACATGAAAAGATGCAGAAT+TGG | 0.352545 | 8_2:-14360211 | None:intergenic |
| CGGAGAGGGTCTATTACATT+AGG | 0.358283 | 8_2:+14360669 | Msa1235970:CDS |
| TCCCTAGGCCAAATGGAATT+CGG | 0.363385 | 8_2:+14362175 | Msa1235970:CDS |
| GCTTGATTTAGCTGAGGAAT+TGG | 0.363995 | 8_2:+14360572 | Msa1235970:CDS |
| ACCCGTTTCCATTTCGGGTC+GGG | 0.364492 | 8_2:+14359660 | Msa1235970:CDS |
| GGAGGAGACACTCGAGGAAT+TGG | 0.366563 | 8_2:+14360497 | Msa1235970:CDS |
| AGCAGCAGCGAGAGCAGCAC+CGG | 0.379500 | 8_2:-14359770 | None:intergenic |
| GACACTCGAGGAATTGGAAT+TGG | 0.386153 | 8_2:+14360503 | Msa1235970:CDS |
| GACGAGAACACGCGCGGGCG+GGG | 0.386683 | 8_2:-14359715 | None:intergenic |
| TGCTTCGACTGGTTTGCATT+TGG | 0.389568 | 8_2:+14360605 | Msa1235970:CDS |
| CTGTGCAACCCGACCCGAAA+TGG | 0.391724 | 8_2:-14359668 | None:intergenic |
| GCAGCACCGGGTTTCGCATT+CGG | 0.393650 | 8_2:-14359757 | None:intergenic |
| CCCTAGGCCAAATGGAATTC+GGG | 0.401999 | 8_2:+14362176 | Msa1235970:CDS |
| TGATCATGATGATAAGGGTT+TGG | 0.412119 | 8_2:+14360119 | Msa1235970:CDS |
| AGTGGGAGGGAGATCGGTTT+CGG | 0.417824 | 8_2:-14359515 | None:intergenic |
| TAGTCATGATCATGATGATA+AGG | 0.419274 | 8_2:+14360113 | Msa1235970:CDS |
| CGATGGTCATGTTACACTTT+GGG | 0.420562 | 8_2:+14361456 | Msa1235970:CDS |
| ATTGGAATTGGAAAGTAAAA+GGG | 0.424782 | 8_2:+14360515 | Msa1235970:CDS |
| AGTGAGAGTGTTGGTGATGT+TGG | 0.424805 | 8_2:+14359997 | Msa1235970:CDS |
| CGTCAATTTAAAGCAGTTAC+GGG | 0.426746 | 8_2:+14361574 | Msa1235970:CDS |
| TCGTCAATTTAAAGCAGTTA+CGG | 0.429097 | 8_2:+14361573 | Msa1235970:CDS |
| TGGTCATGATCATGATAGTA+AGG | 0.429502 | 8_2:+14360185 | Msa1235970:CDS |
| TGTCACCCATCAAACTGCTT+TGG | 0.429672 | 8_2:+14362007 | Msa1235970:CDS |
| ATACCACCAAAGCAGTTTGA+TGG | 0.437050 | 8_2:-14362013 | None:intergenic |
| TGATTTCAGAGGTCGTGAAT+TGG | 0.444482 | 8_2:+14359945 | Msa1235970:CDS |
| ACCCGACCCGAAATGGAAAC+GGG | 0.444552 | 8_2:-14359661 | None:intergenic |
| GAACCCTCCCGAATTCCATT+TGG | 0.444563 | 8_2:-14362183 | None:intergenic |
| CGTATTATCTGCATGATGAA+TGG | 0.446767 | 8_2:-14360850 | None:intergenic |
| ATTGCTGTTGGAATGACAAA+AGG | 0.447442 | 8_2:+14360798 | Msa1235970:CDS |
| GGTACGACTCAGTCCTTCAT+TGG | 0.449958 | 8_2:+14362137 | Msa1235970:intron |
| CACTTTGGGATGTACAGAAA+GGG | 0.451071 | 8_2:+14361470 | Msa1235970:CDS |
| GACTGGTTTGCATTTGGAAG+AGG | 0.451177 | 8_2:+14360611 | Msa1235970:CDS |
| CATGCTAATTACATTGCTGT+TGG | 0.451451 | 8_2:+14360786 | Msa1235970:CDS |
| TGATGGGCAAAATACTGGTT+TGG | 0.453182 | 8_2:+14361803 | Msa1235970:CDS |
| CTTCAACGAAGGCTCTTCTC+TGG | 0.453203 | 8_2:+14361962 | Msa1235970:CDS |
| CATTCATCATGCAGATAATA+CGG | 0.455902 | 8_2:+14360851 | Msa1235970:CDS |
| CACCCGTTTCCATTTCGGGT+CGG | 0.456691 | 8_2:+14359659 | Msa1235970:CDS |
| GATGATAAGAATGATGAGTT+TGG | 0.460012 | 8_2:+14360252 | Msa1235970:CDS |
| CACCCATCAAACTGCTTTGG+TGG | 0.460832 | 8_2:+14362010 | Msa1235970:CDS |
| GCTCAACTCCCTAGGCCAAA+TGG | 0.463140 | 8_2:+14362168 | Msa1235970:CDS |
| ATGGAAACGGGTGCGGGTTG+AGG | 0.463240 | 8_2:-14359649 | None:intergenic |
| AGATCGGTTTCGGTGTCGTC+AGG | 0.463436 | 8_2:-14359505 | None:intergenic |
| CCCGAATTCCATTTGGCCTA+GGG | 0.467021 | 8_2:-14362176 | None:intergenic |
| TCCCGAATTCCATTTGGCCT+AGG | 0.467102 | 8_2:-14362177 | None:intergenic |
| TCAGCACCTACAACATCAAA+AGG | 0.471213 | 8_2:-14360159 | None:intergenic |
| TTAATGGGTCTGTTACTAGA+AGG | 0.472806 | 8_2:-14359622 | None:intergenic |
| AACCCGACCCGAAATGGAAA+CGG | 0.475345 | 8_2:-14359662 | None:intergenic |
| AAATTCGATTAAATCTGAAT+CGG | 0.476732 | 8_2:+14359858 | Msa1235970:CDS |
| GATGATGATGGTAGTTCAAT+TGG | 0.479467 | 8_2:+14360456 | Msa1235970:CDS |
| GCAGTATAAGTAGCATGGTC+GGG | 0.479999 | 8_2:+14361907 | Msa1235970:CDS |
| GCGATGGTCATGTTACACTT+TGG | 0.480264 | 8_2:+14361455 | Msa1235970:CDS |
| TCGAATTTGAAATTCTCCTC+CGG | 0.480977 | 8_2:-14359843 | None:intergenic |
| ACCCGAAATGGAAACGGGTG+CGG | 0.485271 | 8_2:-14359656 | None:intergenic |
| TGCATAATCGCCGCGGCATG+CGG | 0.485777 | 8_2:-14359820 | None:intergenic |
| AGTCATGATCATGATGATAA+GGG | 0.493411 | 8_2:+14360114 | Msa1235970:CDS |
| TGATGAATGGAATATTTACT+AGG | 0.498272 | 8_2:-14360837 | None:intergenic |
| CGTACACCCTCAAGTCTCAT+TGG | 0.503127 | 8_2:-14360648 | None:intergenic |
| GGCTCTTCTCTGGTTGAAGA+AGG | 0.510730 | 8_2:+14361972 | Msa1235970:CDS |
| ACTGGTTTGCATTTGGAAGA+GGG | 0.511076 | 8_2:+14360612 | Msa1235970:CDS |
| ATTGTGAATGGTGCTGGTGG+TGG | 0.512206 | 8_2:+14360333 | Msa1235970:CDS |
| CCCGAAATGGAAACGGGTGC+GGG | 0.513027 | 8_2:-14359655 | None:intergenic |
| TTCTCTGGTTGAAGAAGGTG+TGG | 0.515954 | 8_2:+14361977 | Msa1235970:CDS |
| GATGTTGTAGGTGCTGAAAA+TGG | 0.516253 | 8_2:+14360165 | Msa1235970:CDS |
| TTGCTGTTGGAATGACAAAA+GGG | 0.517424 | 8_2:+14360799 | Msa1235970:CDS |
| CTCCGAATTCGCCAGAAAAG+AGG | 0.517700 | 8_2:-14361842 | None:intergenic |
| GAGCGGAGGTCGAGCTCCAT+GGG | 0.517766 | 8_2:-14359475 | None:intergenic |
| CAATGAGACTTGAGGGTGTA+CGG | 0.519953 | 8_2:+14360649 | Msa1235970:CDS |
| TCCGAATTCGCCAGAAAAGA+GGG | 0.522416 | 8_2:-14361841 | None:intergenic |
| GACCATGCTACTTATACTGC+TGG | 0.522511 | 8_2:-14361904 | None:intergenic |
| TGAGCATAGGCTACCAATGA+AGG | 0.524739 | 8_2:-14362150 | None:intergenic |
| ACACAAACAAGTAGTTCTAC+TGG | 0.528524 | 8_2:+14362234 | Msa1235970:CDS |
| AGTTATTAGTGGAGAGCATA+CGG | 0.529522 | 8_2:+14361504 | Msa1235970:CDS |
| ACACTTTGGGATGTACAGAA+AGG | 0.530298 | 8_2:+14361469 | Msa1235970:CDS |
| GCGGGTTGAGGAAAGTTAAT+GGG | 0.531039 | 8_2:-14359637 | None:intergenic |
| GATGATGATGGTGGCGGCGA+TGG | 0.531911 | 8_2:+14360387 | Msa1235970:CDS |
| TTGAAAGACATGGACGTCAC+TGG | 0.534876 | 8_2:-14361400 | None:intergenic |
| GCGCAGCCAATGAGACTTGA+GGG | 0.536293 | 8_2:+14360642 | Msa1235970:CDS |
| GTGTTTCCTTGAGAGTAAGA+AGG | 0.540094 | 8_2:-14361870 | None:intergenic |
| GAGAAGAAGAATGCTTCGAC+TGG | 0.543944 | 8_2:+14360594 | Msa1235970:CDS |
| GTGATGAGTGGGAGGGAGAT+CGG | 0.544305 | 8_2:-14359521 | None:intergenic |
| ATGTTGATGCTTGGTATACA+AGG | 0.545886 | 8_2:+14361361 | Msa1235970:CDS |
| AGAGCGGAGGTCGAGCTCCA+TGG | 0.547654 | 8_2:-14359476 | None:intergenic |
| CGGTTTCGGTGTCGTCAGGA+AGG | 0.548438 | 8_2:-14359501 | None:intergenic |
| GATGGTGGTGGTGATGATGA+TGG | 0.549110 | 8_2:+14360444 | Msa1235970:CDS |
| TACCACCAAAGCAGTTTGAT+GGG | 0.549504 | 8_2:-14362012 | None:intergenic |
| AGAGGGTGATGATGATGATG+AGG | 0.550826 | 8_2:-14359581 | None:intergenic |
| GTATCGGTAAAAGTTATTAG+TGG | 0.552498 | 8_2:+14361493 | Msa1235970:CDS |
| GACTTGAGGGTGTACGGAGA+GGG | 0.554309 | 8_2:+14360655 | Msa1235970:CDS |
| GTGGAGAGGAGTGAGAGTGT+TGG | 0.555178 | 8_2:+14359988 | Msa1235970:CDS |
| GCAGCAGCGAGAGCAGCACC+GGG | 0.556216 | 8_2:-14359769 | None:intergenic |
| ACTTGTTAGATGTTGATGCT+TGG | 0.558472 | 8_2:+14361352 | Msa1235970:intron |
| TTTCAGAGGTCGTGAATTGG+AGG | 0.560937 | 8_2:+14359948 | Msa1235970:CDS |
| GTCTGTTACTAGAAGGAGAA+GGG | 0.564971 | 8_2:-14359615 | None:intergenic |
| AACAACGACGAGAACACGCG+CGG | 0.565587 | 8_2:-14359721 | None:intergenic |
| GGAAGTCCTTCTTACTCTCA+AGG | 0.567807 | 8_2:+14361864 | Msa1235970:CDS |
| ACGACGAGAACACGCGCGGG+CGG | 0.568321 | 8_2:-14359717 | None:intergenic |
| AGCAGTATAAGTAGCATGGT+CGG | 0.569506 | 8_2:+14361906 | Msa1235970:CDS |
| GATTATGTTGGTGATAATGG+TGG | 0.569752 | 8_2:+14360291 | Msa1235970:CDS |
| GATGGTGGCGGCGATGGTGA+TGG | 0.570893 | 8_2:+14360393 | Msa1235970:CDS |
| TGCAGATAATACGGATGGAA+AGG | 0.571250 | 8_2:+14360860 | Msa1235970:CDS |
| TTAAATTGACGAGTATTCTG+AGG | 0.577235 | 8_2:-14361562 | None:intergenic |
| TGAGAATTTCATCGACAGTA+CGG | 0.580277 | 8_2:-14359543 | None:intergenic |
| TAGCCTATGCTCAACTCCCT+AGG | 0.582341 | 8_2:+14362160 | Msa1235970:CDS |
| GGCGGCGATGGTGATGGTGA+AGG | 0.582753 | 8_2:+14360399 | Msa1235970:CDS |
| GAAGAAATTGTGAATGGTGC+TGG | 0.583622 | 8_2:+14360327 | Msa1235970:CDS |
| ACCAAATTCACTCAAAACAT+CGG | 0.584975 | 8_2:-14359887 | None:intergenic |
| TGAATTGGAGGAGAGATTTG+GGG | 0.585401 | 8_2:+14359960 | Msa1235970:CDS |
| GTTGGTGATGTTGATTTCAG+AGG | 0.585663 | 8_2:+14359934 | Msa1235970:CDS |
| TAGGTTCAACTTCAAAACTC+AGG | 0.586649 | 8_2:+14361651 | Msa1235970:CDS |
| GGATGTACAGAAAGGGGTAT+CGG | 0.586727 | 8_2:+14361477 | Msa1235970:CDS |
| TGGCCTAGGGAGTTGAGCAT+AGG | 0.586999 | 8_2:-14362163 | None:intergenic |
| ATCGACAGTACGGTGATGAG+TGG | 0.588590 | 8_2:-14359533 | None:intergenic |
| GTTCTATGCCATATACTGCA+TGG | 0.591139 | 8_2:+14362202 | Msa1235970:CDS |
| GTCAATTTAAAGCAGTTACG+GGG | 0.591787 | 8_2:+14361575 | Msa1235970:CDS |
| GAAACAGAAGAAATTGTGAA+TGG | 0.592834 | 8_2:+14360321 | Msa1235970:CDS |
| TGCGCAGCCAATGAGACTTG+AGG | 0.596386 | 8_2:+14360641 | Msa1235970:CDS |
| ATGCCGCGGCGATTATGCAC+CGG | 0.598940 | 8_2:+14359824 | Msa1235970:CDS |
| CATCATGCAGATAATACGGA+TGG | 0.601056 | 8_2:+14360855 | Msa1235970:CDS |
| GGTTGGAAACTCTTCAACGA+AGG | 0.601230 | 8_2:+14361951 | Msa1235970:CDS |
| AATGAAGTGGATGGTGATGG+TGG | 0.601314 | 8_2:+14360429 | Msa1235970:CDS |
| TCAAGGAAACACCATGGTCT+CGG | 0.603066 | 8_2:+14361881 | Msa1235970:CDS |
| GAGAACACGCGCGGGCGGGG+AGG | 0.604675 | 8_2:-14359712 | None:intergenic |
| GAAGTGGATGGTGATGGTGG+TGG | 0.607909 | 8_2:+14360432 | Msa1235970:CDS |
| GAATTGGAGGAGAGATTTGG+GGG | 0.608097 | 8_2:+14359961 | Msa1235970:CDS |
| ATTGAGAGGAGTGTGAGTGT+TGG | 0.611361 | 8_2:+14359916 | Msa1235970:CDS |
| ACTTTGGGATGTACAGAAAG+GGG | 0.612738 | 8_2:+14361471 | Msa1235970:CDS |
| AATGAAATAAATGATGATGA+TGG | 0.614694 | 8_2:+14360375 | Msa1235970:CDS |
| AATTTGGTGAGAAAATTGAG+AGG | 0.615411 | 8_2:+14359902 | Msa1235970:CDS |
| TGAAGGTATTGAGAATGAAG+TGG | 0.615489 | 8_2:+14360416 | Msa1235970:CDS |
| GAGAATGAAGTGGATGGTGA+TGG | 0.619496 | 8_2:+14360426 | Msa1235970:CDS |
| AATTCCTCAGCTAAATCAAG+CGG | 0.621509 | 8_2:-14360570 | None:intergenic |
| TGGAGAGCATACGGCACCAG+TGG | 0.625841 | 8_2:+14361513 | Msa1235970:CDS |
| TGTTCCGACTCCGCATGCCG+CGG | 0.626339 | 8_2:+14359810 | Msa1235970:CDS |
| GGCCAGCAGTATAAGTAGCA+TGG | 0.631043 | 8_2:+14361902 | Msa1235970:CDS |
| GGTCATGATCATGATAGTAA+GGG | 0.633857 | 8_2:+14360186 | Msa1235970:CDS |
| CCGCGGCGATTATGCACCGG+AGG | 0.634224 | 8_2:+14359827 | Msa1235970:CDS |
| ACAGTACGGTGATGAGTGGG+AGG | 0.637719 | 8_2:-14359529 | None:intergenic |
| TCGACAGTACGGTGATGAGT+GGG | 0.639499 | 8_2:-14359532 | None:intergenic |
| ACAACGACGAGAACACGCGC+GGG | 0.641896 | 8_2:-14359720 | None:intergenic |
| GGTCTGTTACTAGAAGGAGA+AGG | 0.642212 | 8_2:-14359616 | None:intergenic |
| TCTCTTGCATCATATCTCAG+TGG | 0.645016 | 8_2:+14361615 | Msa1235970:CDS |
| GAAATAAATGATGATGATGG+TGG | 0.645630 | 8_2:+14360378 | Msa1235970:CDS |
| AGACTTGAGGGTGTACGGAG+AGG | 0.645951 | 8_2:+14360654 | Msa1235970:CDS |
| ATAAATGATGATGATGGTGG+CGG | 0.646630 | 8_2:+14360381 | Msa1235970:CDS |
| TAGGCCAAATGGAATTCGGG+AGG | 0.646969 | 8_2:+14362179 | Msa1235970:CDS |
| AGGCCAAATGGAATTCGGGA+GGG | 0.656008 | 8_2:+14362180 | Msa1235970:CDS |
| GGTATTGAGAATGAAGTGGA+TGG | 0.658806 | 8_2:+14360420 | Msa1235970:CDS |
| TCCTTGTTGATTGAAAGACA+TGG | 0.659316 | 8_2:-14361410 | None:intergenic |
| CTGTTACTAGAAGGAGAAGG+GGG | 0.667851 | 8_2:-14359613 | None:intergenic |
| TCTGTTACTAGAAGGAGAAG+GGG | 0.668391 | 8_2:-14359614 | None:intergenic |
| GTTGCACAGAATGTTAGAGT+CGG | 0.668862 | 8_2:+14359682 | Msa1235970:CDS |
| TCCATGTCTTTCAATCAACA+AGG | 0.674111 | 8_2:+14361409 | Msa1235970:CDS |
| ATGCTGATAATGCAATCACG+AGG | 0.674512 | 8_2:+14360706 | Msa1235970:CDS |
| CAGTACGGTGATGAGTGGGA+GGG | 0.674581 | 8_2:-14359528 | None:intergenic |
| GAAGCCGCTTGATTTAGCTG+AGG | 0.687001 | 8_2:+14360566 | Msa1235970:CDS |
| CCGAATTCGCCAGAAAAGAG+GGG | 0.688863 | 8_2:-14361840 | None:intergenic |
| GAAATTGTGAATGGTGCTGG+TGG | 0.691351 | 8_2:+14360330 | Msa1235970:CDS |
| CCTCCGGTGCATAATCGCCG+CGG | 0.691698 | 8_2:-14359827 | None:intergenic |
| TGTCGTCAGGAAGGAAAGAG+CGG | 0.693243 | 8_2:-14359492 | None:intergenic |
| GCTAGTGGAGGAGACACTCG+AGG | 0.694230 | 8_2:+14360491 | Msa1235970:CDS |
| CGTCAGGAAGGAAAGAGCGG+AGG | 0.694339 | 8_2:-14359489 | None:intergenic |
| TCAATTTAAAGCAGTTACGG+GGG | 0.701188 | 8_2:+14361576 | Msa1235970:CDS |
| TGCTGATAATGCAATCACGA+GGG | 0.711312 | 8_2:+14360707 | Msa1235970:CDS |
| AGTATAAGTAGCATGGTCGG+GGG | 0.715553 | 8_2:+14361909 | Msa1235970:CDS |
| TTACTCTCAAGGAAACACCA+TGG | 0.756317 | 8_2:+14361875 | Msa1235970:CDS |
| AGTCGGAACAGATCTCGACG+CGG | 0.816605 | 8_2:-14359797 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAACAAATTGAAATTTT+TGG | + | chr8_2:14362916-14362935 | Msa1235970:intron | 10.0% |
| !! | ATTATTGAAATTTATATCCT+TGG | + | chr8_2:14360938-14360957 | Msa1235970:intron | 15.0% |
| !!! | TCTTAAAATCATTTTTTCTA+AGG | - | chr8_2:14362780-14362799 | None:intergenic | 15.0% |
| !! | AAAACAATCTAATCAATTTA+AGG | + | chr8_2:14362865-14362884 | Msa1235970:intron | 15.0% |
| !! | AAATTCGATTAAATCTGAAT+CGG | + | chr8_2:14359858-14359877 | Msa1235970:CDS | 20.0% |
| !!! | AATGAAATAAATGATGATGA+TGG | + | chr8_2:14360375-14360394 | Msa1235970:CDS | 20.0% |
| !! | CAAATCTCATAGAAAAAATT+AGG | - | chr8_2:14361041-14361060 | None:intergenic | 20.0% |
| !! | AAAAATTGCATTGCTATATT+GGG | - | chr8_2:14361120-14361139 | None:intergenic | 20.0% |
| !! | AAAAAATTGCATTGCTATAT+TGG | - | chr8_2:14361121-14361140 | None:intergenic | 20.0% |
| !! | ATTTCAGATAAAAAAATGAG+AGG | + | chr8_2:14361145-14361164 | Msa1235970:intron | 20.0% |
| !! | AATTTCAAGCAATTATTTGA+TGG | + | chr8_2:14361284-14361303 | Msa1235970:intron | 20.0% |
| !! | CTCAACAAAATAAAAATTAC+AGG | - | chr8_2:14362075-14362094 | None:intergenic | 20.0% |
| !!! | TTGATTGTTTAAAATTTGCA+TGG | + | chr8_2:14362346-14362365 | Msa1235970:intron | 20.0% |
| !!! | TGATTGTTTAAAATTTGCAT+GGG | + | chr8_2:14362347-14362366 | Msa1235970:intron | 20.0% |
| !! | TATTCATCAATGTATAAGAA+CGG | + | chr8_2:14362642-14362661 | Msa1235970:intron | 20.0% |
| !! | TAAGAAGTTATTTAGATACT+AGG | - | chr8_2:14362677-14362696 | None:intergenic | 20.0% |
| !!! | TTAGATTGTTTTTACCTTTT+TGG | - | chr8_2:14362857-14362876 | None:intergenic | 20.0% |
| !! | TATTCAGCTATAAATGAAAA+GGG | - | chr8_2:14362961-14362980 | None:intergenic | 20.0% |
| !!! | AGAAGTAGTTTTGATTATGT+TGG | + | chr8_2:14360279-14360298 | Msa1235970:CDS | 25.0% |
| !!! | TTTGATTATGTTGGTGATAA+TGG | + | chr8_2:14360288-14360307 | Msa1235970:CDS | 25.0% |
| ! | AATTGGAATTGGAAAGTAAA+AGG | + | chr8_2:14360514-14360533 | Msa1235970:CDS | 25.0% |
| ! | ATTGGAATTGGAAAGTAAAA+GGG | + | chr8_2:14360515-14360534 | Msa1235970:CDS | 25.0% |
| !! | TCATTTCATCGCAAAATTTT+AGG | + | chr8_2:14360730-14360749 | Msa1235970:CDS | 25.0% |
| ! | TGATGAATGGAATATTTACT+AGG | - | chr8_2:14360840-14360859 | None:intergenic | 25.0% |
| ! | CGAAAAGTTTGATTAAATCA+GGG | - | chr8_2:14360891-14360910 | None:intergenic | 25.0% |
| !! | CCTGATTTAATCAAACTTTT+CGG | + | chr8_2:14360889-14360908 | Msa1235970:intron | 25.0% |
| ! | TTGAATATATTTGAAGACCA+AGG | - | chr8_2:14360958-14360977 | None:intergenic | 25.0% |
| !! | TTTTCTACTAATAACGTGTA+CGG | - | chr8_2:14361224-14361243 | None:intergenic | 25.0% |
| ! | GTAGAAAAATTGTATAGCAT+AGG | + | chr8_2:14361236-14361255 | Msa1235970:intron | 25.0% |
| ! | CAAAATAAAAATTACAGGAG+TGG | - | chr8_2:14362070-14362089 | None:intergenic | 25.0% |
| ! | TATAGTATCCTGAGTAAATA+AGG | - | chr8_2:14362108-14362127 | None:intergenic | 25.0% |
| !!! | TGGATCTATTTTGTTATAAC+TGG | + | chr8_2:14362259-14362278 | Msa1235970:intron | 25.0% |
| !!! | GGATCTATTTTGTTATAACT+GGG | + | chr8_2:14362260-14362279 | Msa1235970:intron | 25.0% |
| !! | TGATTGGTTAAAATTCACAT+GGG | - | chr8_2:14362413-14362432 | None:intergenic | 25.0% |
| !! | TTGATTGGTTAAAATTCACA+TGG | - | chr8_2:14362414-14362433 | None:intergenic | 25.0% |
| ! | TTTGATTCTCGATATAGATA+TGG | - | chr8_2:14362615-14362634 | None:intergenic | 25.0% |
| ! | AAGTTATTTAGATACTAGGT+GGG | - | chr8_2:14362673-14362692 | None:intergenic | 25.0% |
| ! | CTATTCAGCTATAAATGAAA+AGG | - | chr8_2:14362962-14362981 | None:intergenic | 25.0% |
| ACCAAATTCACTCAAAACAT+CGG | - | chr8_2:14359890-14359909 | None:intergenic | 30.0% | |
| ! | AATTTGGTGAGAAAATTGAG+AGG | + | chr8_2:14359902-14359921 | Msa1235970:CDS | 30.0% |
| TAGTCATGATCATGATGATA+AGG | + | chr8_2:14360113-14360132 | Msa1235970:CDS | 30.0% | |
| AGTCATGATCATGATGATAA+GGG | + | chr8_2:14360114-14360133 | Msa1235970:CDS | 30.0% | |
| AACATGAAAAGATGCAGAAT+TGG | - | chr8_2:14360214-14360233 | None:intergenic | 30.0% | |
| GATGATAAGAATGATGAGTT+TGG | + | chr8_2:14360252-14360271 | Msa1235970:CDS | 30.0% | |
| GAAACAGAAGAAATTGTGAA+TGG | + | chr8_2:14360321-14360340 | Msa1235970:CDS | 30.0% | |
| !! | GAAATAAATGATGATGATGG+TGG | + | chr8_2:14360378-14360397 | Msa1235970:CDS | 30.0% |
| CATTCATCATGCAGATAATA+CGG | + | chr8_2:14360851-14360870 | Msa1235970:CDS | 30.0% | |
| CCGAAAAGTTTGATTAAATC+AGG | - | chr8_2:14360892-14360911 | None:intergenic | 30.0% | |
| ! | GCATGAAATCAGATTTTGTA+TGG | + | chr8_2:14361060-14361079 | Msa1235970:intron | 30.0% |
| !!! | GCAGACTTTATTTTCTAGTA+TGG | - | chr8_2:14361191-14361210 | None:intergenic | 30.0% |
| ! | ATTGTATAGCATAGGAGTTT+TGG | + | chr8_2:14361244-14361263 | Msa1235970:intron | 30.0% |
| ! | GCAATTATTTGATGGAGTTT+TGG | + | chr8_2:14361292-14361311 | Msa1235970:intron | 30.0% |
| ! | GTATCGGTAAAAGTTATTAG+TGG | + | chr8_2:14361493-14361512 | Msa1235970:CDS | 30.0% |
| TTAAATTGACGAGTATTCTG+AGG | - | chr8_2:14361565-14361584 | None:intergenic | 30.0% | |
| ! | TCGTCAATTTAAAGCAGTTA+CGG | + | chr8_2:14361573-14361592 | Msa1235970:CDS | 30.0% |
| !!! | CAGTGGTTGTTTTGATTAAT+AGG | + | chr8_2:14361632-14361651 | Msa1235970:CDS | 30.0% |
| TCTAGCATTGTGTTATATAG+AGG | + | chr8_2:14361710-14361729 | Msa1235970:intron | 30.0% | |
| CTAGCATTGTGTTATATAGA+GGG | + | chr8_2:14361711-14361730 | Msa1235970:intron | 30.0% | |
| !! | ATTTTCTAGTGTCTTCTTGA+TGG | + | chr8_2:14361786-14361805 | Msa1235970:intron | 30.0% |
| !! | TTTTCTAGTGTCTTCTTGAT+GGG | + | chr8_2:14361787-14361806 | Msa1235970:intron | 30.0% |
| AAAATTACAGGAGTGGTATA+TGG | - | chr8_2:14362063-14362082 | None:intergenic | 30.0% | |
| ! | CAGGATACTATATCTGTTTT+AGG | + | chr8_2:14362116-14362135 | Msa1235970:intron | 30.0% |
| ATGTATTTCCATGCAGTATA+TGG | - | chr8_2:14362213-14362232 | None:intergenic | 30.0% | |
| ! | ATATTACCTGTAGCTTTACA+CGG | + | chr8_2:14362492-14362511 | Msa1235970:intron | 30.0% |
| GAAGTTATTTAGATACTAGG+TGG | - | chr8_2:14362674-14362693 | None:intergenic | 30.0% | |
| TGATGTCTCTCAGTATATTT+AGG | - | chr8_2:14362733-14362752 | None:intergenic | 30.0% | |
| !! | TTACCTTTTTGGTAGTAGAT+GGG | - | chr8_2:14362846-14362865 | None:intergenic | 30.0% |
| !! | TTTACCTTTTTGGTAGTAGA+TGG | - | chr8_2:14362847-14362866 | None:intergenic | 30.0% |
| ! | TAATGATGATGATCAATCAG+AGG | - | chr8_2:14362899-14362918 | None:intergenic | 30.0% |
| ! | TTATAGCTGAATAGAAGTGT+TGG | + | chr8_2:14362968-14362987 | Msa1235970:intron | 30.0% |
| TGAGAATTTCATCGACAGTA+CGG | - | chr8_2:14359546-14359565 | None:intergenic | 35.0% | |
| ! | TTAATGGGTCTGTTACTAGA+AGG | - | chr8_2:14359625-14359644 | None:intergenic | 35.0% |
| ! | TCGAATTTGAAATTCTCCTC+CGG | - | chr8_2:14359846-14359865 | None:intergenic | 35.0% |
| !! | TCCGATGTTTTGAGTGAATT+TGG | + | chr8_2:14359886-14359905 | Msa1235970:CDS | 35.0% |
| TGATCATGATGATAAGGGTT+TGG | + | chr8_2:14360119-14360138 | Msa1235970:CDS | 35.0% | |
| ! | TCTACACCTTTTGATGTTGT+AGG | + | chr8_2:14360153-14360172 | Msa1235970:CDS | 35.0% |
| TGGTCATGATCATGATAGTA+AGG | + | chr8_2:14360185-14360204 | Msa1235970:CDS | 35.0% | |
| GGTCATGATCATGATAGTAA+GGG | + | chr8_2:14360186-14360205 | Msa1235970:CDS | 35.0% | |
| !! | GATTATGTTGGTGATAATGG+TGG | + | chr8_2:14360291-14360310 | Msa1235970:CDS | 35.0% |
| !!! | GTGGTTTTGTTGAAGGTATT+GGG | + | chr8_2:14360352-14360371 | Msa1235970:CDS | 35.0% |
| !! | ATAAATGATGATGATGGTGG+CGG | + | chr8_2:14360381-14360400 | Msa1235970:CDS | 35.0% |
| !! | TGAAGGTATTGAGAATGAAG+TGG | + | chr8_2:14360416-14360435 | Msa1235970:CDS | 35.0% |
| !! | GATGATGATGGTAGTTCAAT+TGG | + | chr8_2:14360456-14360475 | Msa1235970:CDS | 35.0% |
| AATTCCTCAGCTAAATCAAG+CGG | - | chr8_2:14360573-14360592 | None:intergenic | 35.0% | |
| CATGCTAATTACATTGCTGT+TGG | + | chr8_2:14360786-14360805 | Msa1235970:CDS | 35.0% | |
| ! | ATTGCTGTTGGAATGACAAA+AGG | + | chr8_2:14360798-14360817 | Msa1235970:CDS | 35.0% |
| ! | TTGCTGTTGGAATGACAAAA+GGG | + | chr8_2:14360799-14360818 | Msa1235970:CDS | 35.0% |
| CGTATTATCTGCATGATGAA+TGG | - | chr8_2:14360853-14360872 | None:intergenic | 35.0% | |
| ! | ACTTGTTAGATGTTGATGCT+TGG | + | chr8_2:14361352-14361371 | Msa1235970:intron | 35.0% |
| ATGTTGATGCTTGGTATACA+AGG | + | chr8_2:14361361-14361380 | Msa1235970:CDS | 35.0% | |
| TCCATGTCTTTCAATCAACA+AGG | + | chr8_2:14361409-14361428 | Msa1235970:CDS | 35.0% | |
| ! | TCCTTGTTGATTGAAAGACA+TGG | - | chr8_2:14361413-14361432 | None:intergenic | 35.0% |
| !! | GATCTTCTTTTAGCTGGTTA+TGG | + | chr8_2:14361433-14361452 | Msa1235970:CDS | 35.0% |
| ! | AGTTATTAGTGGAGAGCATA+CGG | + | chr8_2:14361504-14361523 | Msa1235970:CDS | 35.0% |
| ! | AGAAAAAAAGCATGTACCAC+TGG | - | chr8_2:14361532-14361551 | None:intergenic | 35.0% |
| !!! | GTGGTACATGCTTTTTTTCT+AGG | + | chr8_2:14361532-14361551 | Msa1235970:CDS | 35.0% |
| !!! | ACATGCTTTTTTTCTAGGAC+AGG | + | chr8_2:14361537-14361556 | Msa1235970:CDS | 35.0% |
| ! | CGTCAATTTAAAGCAGTTAC+GGG | + | chr8_2:14361574-14361593 | Msa1235970:CDS | 35.0% |
| ! | GTCAATTTAAAGCAGTTACG+GGG | + | chr8_2:14361575-14361594 | Msa1235970:CDS | 35.0% |
| ! | TCAATTTAAAGCAGTTACGG+GGG | + | chr8_2:14361576-14361595 | Msa1235970:CDS | 35.0% |
| TAGGTTCAACTTCAAAACTC+AGG | + | chr8_2:14361651-14361670 | Msa1235970:CDS | 35.0% | |
| ! | TATTTTGCCATTGTGTGCAA+TGG | + | chr8_2:14361681-14361700 | Msa1235970:intron | 35.0% |
| ATATGATCCATTGCACACAA+TGG | - | chr8_2:14361691-14361710 | None:intergenic | 35.0% | |
| !!! | GTTTTGTGCCTTATTTACTC+AGG | + | chr8_2:14362097-14362116 | Msa1235970:intron | 35.0% |
| ! | ACACAAACAAGTAGTTCTAC+TGG | + | chr8_2:14362234-14362253 | Msa1235970:CDS | 35.0% |
| ! | AACAAGTAGTTCTACTGGTA+TGG | + | chr8_2:14362239-14362258 | Msa1235970:intron | 35.0% |
| AACTGGGTATTATACCATAG+AGG | + | chr8_2:14362276-14362295 | Msa1235970:intron | 35.0% | |
| GTGTAAAGCTACAGGTAATA+TGG | - | chr8_2:14362493-14362512 | None:intergenic | 35.0% | |
| ! | TATTACCTGTAGCTTTACAC+GGG | + | chr8_2:14362493-14362512 | Msa1235970:intron | 35.0% |
| ! | CACTGGTAATGTCCAAATAT+AGG | + | chr8_2:14362541-14362560 | Msa1235970:intron | 35.0% |
| TAATTACACACACATGCATG+TGG | - | chr8_2:14362573-14362592 | None:intergenic | 35.0% | |
| AGGTGAGACTCATTGTTATA+GGG | - | chr8_2:14362713-14362732 | None:intergenic | 35.0% | |
| TAGGTGAGACTCATTGTTAT+AGG | - | chr8_2:14362714-14362733 | None:intergenic | 35.0% | |
| TTTGCTACTACCCATCAATA+AGG | - | chr8_2:14363013-14363032 | None:intergenic | 35.0% | |
| TGGACAATGCATTCTAGTAT+CGG | - | chr8_2:14363055-14363074 | None:intergenic | 35.0% | |
| ! | GCAGTCATTAACTTGATCAA+GGG | + | chr8_2:14363315-14363334 | Msa1235970:intron | 35.0% |
| TCTGTTACTAGAAGGAGAAG+GGG | - | chr8_2:14359617-14359636 | None:intergenic | 40.0% | |
| GTCTGTTACTAGAAGGAGAA+GGG | - | chr8_2:14359618-14359637 | None:intergenic | 40.0% | |
| GTTGCACAGAATGTTAGAGT+CGG | + | chr8_2:14359682-14359701 | Msa1235970:CDS | 40.0% | |
| !! | GTTGGTGATGTTGATTTCAG+AGG | + | chr8_2:14359934-14359953 | Msa1235970:CDS | 40.0% |
| TGATTTCAGAGGTCGTGAAT+TGG | + | chr8_2:14359945-14359964 | Msa1235970:CDS | 40.0% | |
| GTGAATTGGAGGAGAGATTT+GGG | + | chr8_2:14359959-14359978 | Msa1235970:CDS | 40.0% | |
| TGAATTGGAGGAGAGATTTG+GGG | + | chr8_2:14359960-14359979 | Msa1235970:CDS | 40.0% | |
| TCAGCACCTACAACATCAAA+AGG | - | chr8_2:14360162-14360181 | None:intergenic | 40.0% | |
| !! | GATGTTGTAGGTGCTGAAAA+TGG | + | chr8_2:14360165-14360184 | Msa1235970:CDS | 40.0% |
| GAAGAAATTGTGAATGGTGC+TGG | + | chr8_2:14360327-14360346 | Msa1235970:CDS | 40.0% | |
| !!! | GGTGGTTTTGTTGAAGGTAT+TGG | + | chr8_2:14360351-14360370 | Msa1235970:CDS | 40.0% |
| ! | GGTATTGAGAATGAAGTGGA+TGG | + | chr8_2:14360420-14360439 | Msa1235970:CDS | 40.0% |
| GCTTGATTTAGCTGAGGAAT+TGG | + | chr8_2:14360572-14360591 | Msa1235970:CDS | 40.0% | |
| !! | ACTGGTTTGCATTTGGAAGA+GGG | + | chr8_2:14360612-14360631 | Msa1235970:CDS | 40.0% |
| ! | ATGCTGATAATGCAATCACG+AGG | + | chr8_2:14360706-14360725 | Msa1235970:CDS | 40.0% |
| ! | TGCTGATAATGCAATCACGA+GGG | + | chr8_2:14360707-14360726 | Msa1235970:CDS | 40.0% |
| ! | CAAAATTTTAGGCGTGAGCA+TGG | + | chr8_2:14360741-14360760 | Msa1235970:CDS | 40.0% |
| CATCATGCAGATAATACGGA+TGG | + | chr8_2:14360855-14360874 | Msa1235970:CDS | 40.0% | |
| TGCAGATAATACGGATGGAA+AGG | + | chr8_2:14360860-14360879 | Msa1235970:CDS | 40.0% | |
| ! | CAAGGAGATCTTCTTTTAGC+TGG | + | chr8_2:14361427-14361446 | Msa1235970:CDS | 40.0% |
| CGATGGTCATGTTACACTTT+GGG | + | chr8_2:14361456-14361475 | Msa1235970:CDS | 40.0% | |
| !! | ACACTTTGGGATGTACAGAA+AGG | + | chr8_2:14361469-14361488 | Msa1235970:CDS | 40.0% |
| !! | CACTTTGGGATGTACAGAAA+GGG | + | chr8_2:14361470-14361489 | Msa1235970:CDS | 40.0% |
| !! | ACTTTGGGATGTACAGAAAG+GGG | + | chr8_2:14361471-14361490 | Msa1235970:CDS | 40.0% |
| TCTCTTGCATCATATCTCAG+TGG | + | chr8_2:14361615-14361634 | Msa1235970:CDS | 40.0% | |
| ! | CTTCTTGATGGGCAAAATAC+TGG | + | chr8_2:14361798-14361817 | Msa1235970:CDS | 40.0% |
| ! | TGATGGGCAAAATACTGGTT+TGG | + | chr8_2:14361803-14361822 | Msa1235970:CDS | 40.0% |
| GTGTTTCCTTGAGAGTAAGA+AGG | - | chr8_2:14361873-14361892 | None:intergenic | 40.0% | |
| TTACTCTCAAGGAAACACCA+TGG | + | chr8_2:14361875-14361894 | Msa1235970:CDS | 40.0% | |
| AGCAGTATAAGTAGCATGGT+CGG | + | chr8_2:14361906-14361925 | Msa1235970:CDS | 40.0% | |
| TACCACCAAAGCAGTTTGAT+GGG | - | chr8_2:14362015-14362034 | None:intergenic | 40.0% | |
| ATACCACCAAAGCAGTTTGA+TGG | - | chr8_2:14362016-14362035 | None:intergenic | 40.0% | |
| GTTCTATGCCATATACTGCA+TGG | + | chr8_2:14362202-14362221 | Msa1235970:CDS | 40.0% | |
| TTCAACGCACTCTCTTTGAT+TGG | - | chr8_2:14362429-14362448 | None:intergenic | 40.0% | |
| TATGAAGCACACATAGACAC+TGG | + | chr8_2:14362524-14362543 | Msa1235970:intron | 40.0% | |
| ATGTGGCAGTGTCCTATATT+TGG | - | chr8_2:14362556-14362575 | None:intergenic | 40.0% | |
| ATGATCAATCAGAGGATGGA+CGG | - | chr8_2:14362891-14362910 | None:intergenic | 40.0% | |
| GATGATGATCAATCAGAGGA+TGG | - | chr8_2:14362895-14362914 | None:intergenic | 40.0% | |
| !! | GCTGAATAGAAGTGTTGGTT+AGG | + | chr8_2:14362973-14362992 | Msa1235970:intron | 40.0% |
| !! | TAGAAGTGTTGGTTAGGTGT+TGG | + | chr8_2:14362979-14362998 | Msa1235970:intron | 40.0% |
| !! | TCAGGTACGCTTTAACTTGA+AGG | + | chr8_2:14363101-14363120 | Msa1235970:intron | 40.0% |
| ! | GGCAGTCATTAACTTGATCA+AGG | + | chr8_2:14363314-14363333 | Msa1235970:intron | 40.0% |
| ! | AGAGGGTGATGATGATGATG+AGG | - | chr8_2:14359584-14359603 | None:intergenic | 45.0% |
| CTGTTACTAGAAGGAGAAGG+GGG | - | chr8_2:14359616-14359635 | None:intergenic | 45.0% | |
| GGTCTGTTACTAGAAGGAGA+AGG | - | chr8_2:14359619-14359638 | None:intergenic | 45.0% | |
| ! | GCGGGTTGAGGAAAGTTAAT+GGG | - | chr8_2:14359640-14359659 | None:intergenic | 45.0% |
| ! | TGCGGGTTGAGGAAAGTTAA+TGG | - | chr8_2:14359641-14359660 | None:intergenic | 45.0% |
| ! | ATTGAGAGGAGTGTGAGTGT+TGG | + | chr8_2:14359916-14359935 | Msa1235970:CDS | 45.0% |
| TTTCAGAGGTCGTGAATTGG+AGG | + | chr8_2:14359948-14359967 | Msa1235970:CDS | 45.0% | |
| CGTGAATTGGAGGAGAGATT+TGG | + | chr8_2:14359958-14359977 | Msa1235970:CDS | 45.0% | |
| GAATTGGAGGAGAGATTTGG+GGG | + | chr8_2:14359961-14359980 | Msa1235970:CDS | 45.0% | |
| !! | AGTGAGAGTGTTGGTGATGT+TGG | + | chr8_2:14359997-14360016 | Msa1235970:CDS | 45.0% |
| ! | GAAATTGTGAATGGTGCTGG+TGG | + | chr8_2:14360330-14360349 | Msa1235970:CDS | 45.0% |
| GAGAATGAAGTGGATGGTGA+TGG | + | chr8_2:14360426-14360445 | Msa1235970:CDS | 45.0% | |
| !! | AATGAAGTGGATGGTGATGG+TGG | + | chr8_2:14360429-14360448 | Msa1235970:CDS | 45.0% |
| !! | TGGTGATGTTTTCGAGCTAG+TGG | + | chr8_2:14360476-14360495 | Msa1235970:CDS | 45.0% |
| !! | TGATGTTTTCGAGCTAGTGG+AGG | + | chr8_2:14360479-14360498 | Msa1235970:CDS | 45.0% |
| GACACTCGAGGAATTGGAAT+TGG | + | chr8_2:14360503-14360522 | Msa1235970:CDS | 45.0% | |
| GAGAAGAAGAATGCTTCGAC+TGG | + | chr8_2:14360594-14360613 | Msa1235970:CDS | 45.0% | |
| !! | TGCTTCGACTGGTTTGCATT+TGG | + | chr8_2:14360605-14360624 | Msa1235970:CDS | 45.0% |
| !! | GACTGGTTTGCATTTGGAAG+AGG | + | chr8_2:14360611-14360630 | Msa1235970:CDS | 45.0% |
| ! | CAATGAGACTTGAGGGTGTA+CGG | + | chr8_2:14360649-14360668 | Msa1235970:CDS | 45.0% |
| CGGAGAGGGTCTATTACATT+AGG | + | chr8_2:14360669-14360688 | Msa1235970:CDS | 45.0% | |
| !! | GCATGGTTCTGCTCAAGTTT+TGG | + | chr8_2:14360758-14360777 | Msa1235970:CDS | 45.0% |
| TTGAAAGACATGGACGTCAC+TGG | - | chr8_2:14361403-14361422 | None:intergenic | 45.0% | |
| !! | CTTTTAGCTGGTTATGGCGA+TGG | + | chr8_2:14361439-14361458 | Msa1235970:CDS | 45.0% |
| GCGATGGTCATGTTACACTT+TGG | + | chr8_2:14361455-14361474 | Msa1235970:CDS | 45.0% | |
| ! | GGATGTACAGAAAGGGGTAT+CGG | + | chr8_2:14361477-14361496 | Msa1235970:CDS | 45.0% |
| TCCGAATTCGCCAGAAAAGA+GGG | - | chr8_2:14361844-14361863 | None:intergenic | 45.0% | |
| GGAAGTCCTTCTTACTCTCA+AGG | + | chr8_2:14361864-14361883 | Msa1235970:CDS | 45.0% | |
| TCAAGGAAACACCATGGTCT+CGG | + | chr8_2:14361881-14361900 | Msa1235970:CDS | 45.0% | |
| ! | GACCATGCTACTTATACTGC+TGG | - | chr8_2:14361907-14361926 | None:intergenic | 45.0% |
| GCAGTATAAGTAGCATGGTC+GGG | + | chr8_2:14361907-14361926 | Msa1235970:CDS | 45.0% | |
| CAGTATAAGTAGCATGGTCG+GGG | + | chr8_2:14361908-14361927 | Msa1235970:CDS | 45.0% | |
| AGTATAAGTAGCATGGTCGG+GGG | + | chr8_2:14361909-14361928 | Msa1235970:CDS | 45.0% | |
| GGTTGGAAACTCTTCAACGA+AGG | + | chr8_2:14361951-14361970 | Msa1235970:CDS | 45.0% | |
| TTCTCTGGTTGAAGAAGGTG+TGG | + | chr8_2:14361977-14361996 | Msa1235970:CDS | 45.0% | |
| TGTCACCCATCAAACTGCTT+TGG | + | chr8_2:14362007-14362026 | Msa1235970:CDS | 45.0% | |
| CAGGAGTGGTATATGGAACA+AGG | - | chr8_2:14362056-14362075 | None:intergenic | 45.0% | |
| TGAGCATAGGCTACCAATGA+AGG | - | chr8_2:14362153-14362172 | None:intergenic | 45.0% | |
| TCCCTAGGCCAAATGGAATT+CGG | + | chr8_2:14362175-14362194 | Msa1235970:CDS | 45.0% | |
| ! | GTGTTGCTAGCATTCCTCTA+TGG | - | chr8_2:14362293-14362312 | None:intergenic | 45.0% |
| ATGTGGGGCCCATGTAAATT+TGG | + | chr8_2:14362382-14362401 | Msa1235970:intron | 45.0% | |
| GGGTCCCACCAAATTTACAT+GGG | - | chr8_2:14362393-14362412 | None:intergenic | 45.0% | |
| TGGGTCCCACCAAATTTACA+TGG | - | chr8_2:14362394-14362413 | None:intergenic | 45.0% | |
| AGTAACCCGTGTAAAGCTAC+AGG | - | chr8_2:14362501-14362520 | None:intergenic | 45.0% | |
| TGGATTGCAGGTGTAAGACA+TGG | - | chr8_2:14362823-14362842 | None:intergenic | 45.0% | |
| !! | CCTTTTTGGTAGTAGATGGG+TGG | - | chr8_2:14362843-14362862 | None:intergenic | 45.0% |
| CCACCCATCTACTACCAAAA+AGG | + | chr8_2:14362840-14362859 | Msa1235970:intron | 45.0% | |
| TGGAGTCGTGTCCTTATTGA+TGG | + | chr8_2:14362999-14363018 | Msa1235970:intron | 45.0% | |
| GGAGTCGTGTCCTTATTGAT+GGG | + | chr8_2:14363000-14363019 | Msa1235970:intron | 45.0% | |
| ATGCATTGTCCAACGTGTGT+CGG | + | chr8_2:14363063-14363082 | Msa1235970:intron | 45.0% | |
| !! | TTAATTTAATATTATGTTTA+AGG | + | chr8_2:14361001-14361020 | Msa1235970:intron | 5.0% |
| TGTCGTCAGGAAGGAAAGAG+CGG | - | chr8_2:14359495-14359514 | None:intergenic | 50.0% | |
| TCGACAGTACGGTGATGAGT+GGG | - | chr8_2:14359535-14359554 | None:intergenic | 50.0% | |
| ATCGACAGTACGGTGATGAG+TGG | - | chr8_2:14359536-14359555 | None:intergenic | 50.0% | |
| TTACTAGAAGGAGAAGGGGG+TGG | - | chr8_2:14359613-14359632 | None:intergenic | 50.0% | |
| AACCCGACCCGAAATGGAAA+CGG | - | chr8_2:14359665-14359684 | None:intergenic | 50.0% | |
| ! | GGAGAGATTTGGGGGTTTTG+TGG | + | chr8_2:14359969-14359988 | Msa1235970:CDS | 50.0% |
| !! | GATTTGGGGGTTTTGTGGAG+AGG | + | chr8_2:14359974-14359993 | Msa1235970:CDS | 50.0% |
| !! | ATTGTGAATGGTGCTGGTGG+TGG | + | chr8_2:14360333-14360352 | Msa1235970:CDS | 50.0% |
| !!! | GCTGGTGGTGGTTTTGTTGA+AGG | + | chr8_2:14360345-14360364 | Msa1235970:CDS | 50.0% |
| !! | GATGGTGGTGGTGATGATGA+TGG | + | chr8_2:14360444-14360463 | Msa1235970:CDS | 50.0% |
| GAAGCCGCTTGATTTAGCTG+AGG | + | chr8_2:14360566-14360585 | Msa1235970:CDS | 50.0% | |
| CGTACACCCTCAAGTCTCAT+TGG | - | chr8_2:14360651-14360670 | None:intergenic | 50.0% | |
| ! | TCTGCTTCACCCCTCTTTTC+TGG | + | chr8_2:14361831-14361850 | Msa1235970:CDS | 50.0% |
| CCGAATTCGCCAGAAAAGAG+GGG | - | chr8_2:14361843-14361862 | None:intergenic | 50.0% | |
| !! | CCCCTCTTTTCTGGCGAATT+CGG | + | chr8_2:14361840-14361859 | Msa1235970:CDS | 50.0% |
| CTCCGAATTCGCCAGAAAAG+AGG | - | chr8_2:14361845-14361864 | None:intergenic | 50.0% | |
| !! | CTCTTTTCTGGCGAATTCGG+AGG | + | chr8_2:14361843-14361862 | Msa1235970:CDS | 50.0% |
| GGCCAGCAGTATAAGTAGCA+TGG | + | chr8_2:14361902-14361921 | Msa1235970:CDS | 50.0% | |
| CTTCAACGAAGGCTCTTCTC+TGG | + | chr8_2:14361962-14361981 | Msa1235970:CDS | 50.0% | |
| GGCTCTTCTCTGGTTGAAGA+AGG | + | chr8_2:14361972-14361991 | Msa1235970:CDS | 50.0% | |
| CACCCATCAAACTGCTTTGG+TGG | + | chr8_2:14362010-14362029 | Msa1235970:CDS | 50.0% | |
| GGTACGACTCAGTCCTTCAT+TGG | + | chr8_2:14362137-14362156 | Msa1235970:intron | 50.0% | |
| TAGCCTATGCTCAACTCCCT+AGG | + | chr8_2:14362160-14362179 | Msa1235970:CDS | 50.0% | |
| CCCGAATTCCATTTGGCCTA+GGG | - | chr8_2:14362179-14362198 | None:intergenic | 50.0% | |
| CCCTAGGCCAAATGGAATTC+GGG | + | chr8_2:14362176-14362195 | Msa1235970:CDS | 50.0% | |
| TCCCGAATTCCATTTGGCCT+AGG | - | chr8_2:14362180-14362199 | None:intergenic | 50.0% | |
| TAGGCCAAATGGAATTCGGG+AGG | + | chr8_2:14362179-14362198 | Msa1235970:CDS | 50.0% | |
| AGGCCAAATGGAATTCGGGA+GGG | + | chr8_2:14362180-14362199 | Msa1235970:CDS | 50.0% | |
| GAACCCTCCCGAATTCCATT+TGG | - | chr8_2:14362186-14362205 | None:intergenic | 50.0% | |
| ATGGGTCCCACCATATCATG+TGG | + | chr8_2:14362365-14362384 | Msa1235970:intron | 50.0% | |
| TGGGTCCCACCATATCATGT+GGG | + | chr8_2:14362366-14362385 | Msa1235970:intron | 50.0% | |
| TACATGGGCCCCACATGATA+TGG | - | chr8_2:14362378-14362397 | None:intergenic | 50.0% | |
| TGGGGCCCATGTAAATTTGG+TGG | + | chr8_2:14362385-14362404 | Msa1235970:intron | 50.0% | |
| GGGGCCCATGTAAATTTGGT+GGG | + | chr8_2:14362386-14362405 | Msa1235970:intron | 50.0% | |
| !! | GTAGTAGATGGGTGGATTGC+AGG | - | chr8_2:14362835-14362854 | None:intergenic | 50.0% |
| AAAGCGTACCTGACACATGC+CGG | - | chr8_2:14363094-14363113 | None:intergenic | 50.0% | |
| !! | AGATCGGTTTCGGTGTCGTC+AGG | - | chr8_2:14359508-14359527 | None:intergenic | 55.0% |
| ! | AGTGGGAGGGAGATCGGTTT+CGG | - | chr8_2:14359518-14359537 | None:intergenic | 55.0% |
| GTGATGAGTGGGAGGGAGAT+CGG | - | chr8_2:14359524-14359543 | None:intergenic | 55.0% | |
| CAGTACGGTGATGAGTGGGA+GGG | - | chr8_2:14359531-14359550 | None:intergenic | 55.0% | |
| ACAGTACGGTGATGAGTGGG+AGG | - | chr8_2:14359532-14359551 | None:intergenic | 55.0% | |
| GAAGGGGGTGGAGAAGAAGA+GGG | - | chr8_2:14359601-14359620 | None:intergenic | 55.0% | |
| AGAAGGGGGTGGAGAAGAAG+AGG | - | chr8_2:14359602-14359621 | None:intergenic | 55.0% | |
| ACCCGCACCCGTTTCCATTT+CGG | + | chr8_2:14359654-14359673 | Msa1235970:CDS | 55.0% | |
| ACCCGAAATGGAAACGGGTG+CGG | - | chr8_2:14359659-14359678 | None:intergenic | 55.0% | |
| ! | CACCCGTTTCCATTTCGGGT+CGG | + | chr8_2:14359659-14359678 | Msa1235970:CDS | 55.0% |
| ! | ACCCGTTTCCATTTCGGGTC+GGG | + | chr8_2:14359660-14359679 | Msa1235970:CDS | 55.0% |
| ACCCGACCCGAAATGGAAAC+GGG | - | chr8_2:14359664-14359683 | None:intergenic | 55.0% | |
| AACAACGACGAGAACACGCG+CGG | - | chr8_2:14359724-14359743 | None:intergenic | 55.0% | |
| CGCGTGTTCTCGTCGTTGTT+TGG | + | chr8_2:14359724-14359743 | Msa1235970:CDS | 55.0% | |
| GTTACGCCGAATGCGAAACC+CGG | + | chr8_2:14359751-14359770 | Msa1235970:CDS | 55.0% | |
| AGTCGGAACAGATCTCGACG+CGG | - | chr8_2:14359800-14359819 | None:intergenic | 55.0% | |
| ! | GTGGAGAGGAGTGAGAGTGT+TGG | + | chr8_2:14359988-14360007 | Msa1235970:CDS | 55.0% |
| !! | GAAGTGGATGGTGATGGTGG+TGG | + | chr8_2:14360432-14360451 | Msa1235970:CDS | 55.0% |
| GGAGGAGACACTCGAGGAAT+TGG | + | chr8_2:14360497-14360516 | Msa1235970:CDS | 55.0% | |
| TGCGCAGCCAATGAGACTTG+AGG | + | chr8_2:14360641-14360660 | Msa1235970:CDS | 55.0% | |
| GCGCAGCCAATGAGACTTGA+GGG | + | chr8_2:14360642-14360661 | Msa1235970:CDS | 55.0% | |
| ! | AGACTTGAGGGTGTACGGAG+AGG | + | chr8_2:14360654-14360673 | Msa1235970:CDS | 55.0% |
| ! | GACTTGAGGGTGTACGGAGA+GGG | + | chr8_2:14360655-14360674 | Msa1235970:CDS | 55.0% |
| AGCAGTTACGGGGGATTGCA+AGG | + | chr8_2:14361585-14361604 | Msa1235970:CDS | 55.0% | |
| GCAGTTACGGGGGATTGCAA+GGG | + | chr8_2:14361586-14361605 | Msa1235970:CDS | 55.0% | |
| TATACTGCTGGCCGAGACCA+TGG | - | chr8_2:14361895-14361914 | None:intergenic | 55.0% | |
| TTGTTGGGGGAGATGCAGGT+TGG | + | chr8_2:14361934-14361953 | Msa1235970:CDS | 55.0% | |
| TGGCCTAGGGAGTTGAGCAT+AGG | - | chr8_2:14362166-14362185 | None:intergenic | 55.0% | |
| GCTCAACTCCCTAGGCCAAA+TGG | + | chr8_2:14362168-14362187 | Msa1235970:CDS | 55.0% | |
| GGGTCCCACCATATCATGTG+GGG | + | chr8_2:14362367-14362386 | Msa1235970:intron | 55.0% | |
| TGGGCCCCACATGATATGGT+GGG | - | chr8_2:14362374-14362393 | None:intergenic | 55.0% | |
| ATGGGCCCCACATGATATGG+TGG | - | chr8_2:14362375-14362394 | None:intergenic | 55.0% | |
| CGTCAGGAAGGAAAGAGCGG+AGG | - | chr8_2:14359492-14359511 | None:intergenic | 60.0% | |
| !! | CGGTTTCGGTGTCGTCAGGA+AGG | - | chr8_2:14359504-14359523 | None:intergenic | 60.0% |
| ! | ATGGAAACGGGTGCGGGTTG+AGG | - | chr8_2:14359652-14359671 | None:intergenic | 60.0% |
| CCCGAAATGGAAACGGGTGC+GGG | - | chr8_2:14359658-14359677 | None:intergenic | 60.0% | |
| CCCGCACCCGTTTCCATTTC+GGG | + | chr8_2:14359655-14359674 | Msa1235970:CDS | 60.0% | |
| CTGTGCAACCCGACCCGAAA+TGG | - | chr8_2:14359671-14359690 | None:intergenic | 60.0% | |
| ACAACGACGAGAACACGCGC+GGG | - | chr8_2:14359723-14359742 | None:intergenic | 60.0% | |
| ! | GCAGCACCGGGTTTCGCATT+CGG | - | chr8_2:14359760-14359779 | None:intergenic | 60.0% |
| TGCATAATCGCCGCGGCATG+CGG | - | chr8_2:14359823-14359842 | None:intergenic | 60.0% | |
| ATGCCGCGGCGATTATGCAC+CGG | + | chr8_2:14359824-14359843 | Msa1235970:CDS | 60.0% | |
| !! | GATGATGATGGTGGCGGCGA+TGG | + | chr8_2:14360387-14360406 | Msa1235970:CDS | 60.0% |
| GCTAGTGGAGGAGACACTCG+AGG | + | chr8_2:14360491-14360510 | Msa1235970:CDS | 60.0% | |
| ! | TGGAGAGCATACGGCACCAG+TGG | + | chr8_2:14361513-14361532 | Msa1235970:CDS | 60.0% |
| TACGGGGGATTGCAAGGGTC+TGG | + | chr8_2:14361591-14361610 | Msa1235970:CDS | 60.0% | |
| !! | AGCATGGTCGGGGGTGTTGT+TGG | + | chr8_2:14361918-14361937 | Msa1235970:CDS | 60.0% |
| !! | GCATGGTCGGGGGTGTTGTT+GGG | + | chr8_2:14361919-14361938 | Msa1235970:CDS | 60.0% |
| !! | CATGGTCGGGGGTGTTGTTG+GGG | + | chr8_2:14361920-14361939 | Msa1235970:CDS | 60.0% |
| !! | ATGGTCGGGGGTGTTGTTGG+GGG | + | chr8_2:14361921-14361940 | Msa1235970:CDS | 60.0% |
| !! | GGTGTTGTTGGGGGAGATGC+AGG | + | chr8_2:14361930-14361949 | Msa1235970:CDS | 60.0% |
| ! | CCAACGTGTGTCGGTGTGTC+CGG | + | chr8_2:14363072-14363091 | Msa1235970:intron | 60.0% |
| AGCAGCAGCGAGAGCAGCAC+CGG | - | chr8_2:14359773-14359792 | None:intergenic | 65.0% | |
| TGTTCCGACTCCGCATGCCG+CGG | + | chr8_2:14359810-14359829 | Msa1235970:CDS | 65.0% | |
| CCTCCGGTGCATAATCGCCG+CGG | - | chr8_2:14359830-14359849 | None:intergenic | 65.0% | |
| !! | GATGGTGGCGGCGATGGTGA+TGG | + | chr8_2:14360393-14360412 | Msa1235970:CDS | 65.0% |
| !! | GGCGGCGATGGTGATGGTGA+AGG | + | chr8_2:14360399-14360418 | Msa1235970:CDS | 65.0% |
| CCGGACACACCGACACACGT+TGG | - | chr8_2:14363075-14363094 | None:intergenic | 65.0% | |
| CGGTGTGTCCGGCATGTGTC+AGG | + | chr8_2:14363083-14363102 | Msa1235970:intron | 65.0% | |
| ACGACGAGAACACGCGCGGG+CGG | - | chr8_2:14359720-14359739 | None:intergenic | 70.0% | |
| GCAGCAGCGAGAGCAGCACC+GGG | - | chr8_2:14359772-14359791 | None:intergenic | 70.0% | |
| ATCGCCGCGGCATGCGGAGT+CGG | - | chr8_2:14359817-14359836 | None:intergenic | 70.0% | |
| CCGCGGCGATTATGCACCGG+AGG | + | chr8_2:14359827-14359846 | Msa1235970:CDS | 70.0% | |
| GACGAGAACACGCGCGGGCG+GGG | - | chr8_2:14359718-14359737 | None:intergenic | 75.0% | |
| CGACGAGAACACGCGCGGGC+GGG | - | chr8_2:14359719-14359738 | None:intergenic | 75.0% | |
| ! | GAGAACACGCGCGGGCGGGG+AGG | - | chr8_2:14359715-14359734 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 14359478 | 14363356 | 14359478 | ID=Msa1235970;Name=Msa1235970 |
| chr8_2 | mRNA | 14359478 | 14363356 | 14359478 | ID=Msa1235970-mRNA-1;Parent=Msa1235970;Name=Msa1235970-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.5|0.2|0.8|1|1|5|0|702 |
| chr8_2 | exon | 14359478 | 14360881 | 14359478 | ID=Msa1235970-mRNA-1:exon:5450;Parent=Msa1235970-mRNA-1 |
| chr8_2 | exon | 14361361 | 14361672 | 14361361 | ID=Msa1235970-mRNA-1:exon:5451;Parent=Msa1235970-mRNA-1 |
| chr8_2 | exon | 14361795 | 14362031 | 14361795 | ID=Msa1235970-mRNA-1:exon:5452;Parent=Msa1235970-mRNA-1 |
| chr8_2 | exon | 14362138 | 14362255 | 14362138 | ID=Msa1235970-mRNA-1:exon:5453;Parent=Msa1235970-mRNA-1 |
| chr8_2 | exon | 14363319 | 14363356 | 14363319 | ID=Msa1235970-mRNA-1:exon:5454;Parent=Msa1235970-mRNA-1 |
| chr8_2 | CDS | 14359478 | 14360881 | 14359478 | ID=Msa1235970-mRNA-1:cds;Parent=Msa1235970-mRNA-1 |
| chr8_2 | CDS | 14361361 | 14361672 | 14361361 | ID=Msa1235970-mRNA-1:cds;Parent=Msa1235970-mRNA-1 |
| chr8_2 | CDS | 14361795 | 14362031 | 14361795 | ID=Msa1235970-mRNA-1:cds;Parent=Msa1235970-mRNA-1 |
| chr8_2 | CDS | 14362138 | 14362255 | 14362138 | ID=Msa1235970-mRNA-1:cds;Parent=Msa1235970-mRNA-1 |
| chr8_2 | CDS | 14363319 | 14363356 | 14363319 | ID=Msa1235970-mRNA-1:cds;Parent=Msa1235970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
