Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317930 | XP_024638357.1 | 99.631 | 271 | 1 | 0 | 1 | 271 | 497 | 767 | 0.0 | 565 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317930 | A0A396IFR0 | 99.631 | 271 | 1 | 0 | 1 | 271 | 497 | 767 | 0.0 | 565 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095830 | Msa1317930 | 0.822443 | 2.362053e-53 | -8.615850e-47 |
| Msa0658950 | Msa1317930 | 0.802634 | 5.110633e-49 | -8.615850e-47 |
| Msa0685620 | Msa1317930 | 0.845170 | 4.800382e-59 | -8.615850e-47 |
| Msa0741200 | Msa1317930 | 0.805026 | 1.628031e-49 | -8.615850e-47 |
| Msa0193530 | Msa1317930 | 0.803167 | 3.966455e-49 | -8.615850e-47 |
| Msa0222160 | Msa1317930 | 0.810746 | 9.888734e-51 | -8.615850e-47 |
| Msa1235970 | Msa1317930 | 0.811003 | 8.698444e-51 | -8.615850e-47 |
| Msa1237720 | Msa1317930 | 0.835370 | 1.746062e-56 | -8.615850e-47 |
| Msa1317920 | Msa1317930 | 0.901980 | 1.546574e-78 | -8.615850e-47 |
| Msa0467310 | Msa1317930 | 0.816378 | 5.703778e-52 | -8.615850e-47 |
| Msa0263680 | Msa1317930 | 0.803128 | 4.041650e-49 | -8.615850e-47 |
| Msa0338960 | Msa1317930 | 0.819209 | 1.309587e-52 | -8.615850e-47 |
| Msa1204330 | Msa1317930 | 0.833011 | 6.812533e-56 | -8.615850e-47 |
| Msa0554670 | Msa1317930 | 0.809079 | 2.258620e-50 | -8.615850e-47 |
| Msa0554680 | Msa1317930 | 0.831553 | 1.563840e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317930 | MtrunA17_Chr4g0068991 | 99.631 | 271 | 1 | 0 | 1 | 271 | 497 | 767 | 0.0 | 565 |
| Msa1317930 | MtrunA17_Chr5g0400061 | 31.970 | 269 | 163 | 6 | 1 | 265 | 483 | 735 | 3.83e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1317930 | AT1G48090.2 | 72.325 | 271 | 75 | 0 | 1 | 271 | 539 | 809 | 2.83e-134 | 419 |
| Msa1317930 | AT1G48090.6 | 72.325 | 271 | 75 | 0 | 1 | 271 | 498 | 768 | 2.94e-134 | 419 |
| Msa1317930 | AT1G48090.4 | 72.325 | 271 | 75 | 0 | 1 | 271 | 498 | 768 | 2.94e-134 | 419 |
| Msa1317930 | AT1G48090.5 | 72.325 | 271 | 75 | 0 | 1 | 271 | 498 | 768 | 3.43e-134 | 419 |
| Msa1317930 | AT1G48090.1 | 72.325 | 271 | 75 | 0 | 1 | 271 | 539 | 809 | 3.78e-134 | 419 |
| Msa1317930 | AT1G48090.3 | 72.325 | 271 | 75 | 0 | 1 | 271 | 520 | 790 | 3.85e-134 | 418 |
| Msa1317930 | AT4G17140.3 | 31.600 | 250 | 156 | 4 | 24 | 271 | 509 | 745 | 6.83e-33 | 127 |
| Msa1317930 | AT4G17140.2 | 31.600 | 250 | 156 | 4 | 24 | 271 | 509 | 745 | 7.03e-33 | 127 |
| Msa1317930 | AT4G17140.1 | 31.600 | 250 | 156 | 4 | 24 | 271 | 509 | 745 | 7.59e-33 | 127 |
Find 54 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGACTGTGGCTCTGATTT+TGG | 0.092926 | 8_4:-19645089 | Msa1317930:CDS |
| ATTATTTGGCTATCATAATT+TGG | 0.220101 | 8_4:+19645047 | None:intergenic |
| GCAGAATATGGTCCAGTTTC+TGG | 0.226705 | 8_4:-19648623 | Msa1317930:exon |
| TAGTGGATGAGTTCATTATT+TGG | 0.307574 | 8_4:+19645033 | None:intergenic |
| GGAGACAGCTACTGCTTTGC+AGG | 0.319429 | 8_4:-19647536 | Msa1317930:intron |
| AATGGCAGTACTTGTTAATC+AGG | 0.338428 | 8_4:-19644967 | Msa1317930:intron |
| CTGAGAGGAACTCTTACTTT+AGG | 0.339504 | 8_4:+19645337 | None:intergenic |
| ATGTTTATTCTCTGCTTGAT+AGG | 0.343032 | 8_4:-19644995 | Msa1317930:CDS |
| CAGGATTATCAGTGTGAATC+AGG | 0.379802 | 8_4:-19648572 | Msa1317930:CDS |
| TAGATACAGTTACCAGAAAC+TGG | 0.380046 | 8_4:+19648611 | None:intergenic |
| GATGTATTACTAAAATTCTA+TGG | 0.384542 | 8_4:-19648478 | Msa1317930:CDS |
| TTTCTGGTAACTGTATCTAT+TGG | 0.391412 | 8_4:-19648607 | Msa1317930:CDS |
| TGCAAAAGATGCGCAGAATA+TGG | 0.406383 | 8_4:-19648635 | Msa1317930:exon |
| TTGATGTGTCAACCAAGTTT+AGG | 0.409995 | 8_4:-19648519 | Msa1317930:CDS |
| CTATTGGTCAGGCGGCTGCC+AGG | 0.428030 | 8_4:-19648591 | Msa1317930:CDS |
| CAATCAATATTCTCCCCAAT+TGG | 0.434308 | 8_4:+19648055 | None:intergenic |
| GCAGAAGGTGAATGCTTTAG+TGG | 0.466685 | 8_4:-19648095 | Msa1317930:CDS |
| AGCACAGGAGCAATTTCAAA+TGG | 0.472597 | 8_4:-19645822 | Msa1317930:CDS |
| AAATTACCGTAACGTGGCAT+GGG | 0.479478 | 8_4:+19648011 | None:intergenic |
| ACCTGGGTAAGTGAGCCTTC+AGG | 0.495248 | 8_4:+19648445 | None:intergenic |
| TCTGCCTCTGCTCATCAGAC+TGG | 0.496308 | 8_4:+19645162 | None:intergenic |
| GAAATTACCGTAACGTGGCA+TGG | 0.501120 | 8_4:+19648010 | None:intergenic |
| GAAGCATACCGCGGTGTGTA+GGG | 0.501442 | 8_4:+19645258 | None:intergenic |
| CGTAGTATCAACTCCTCCTC+GGG | 0.502453 | 8_4:+19648661 | None:intergenic |
| GAATATTGATTGGAGATTGT+CGG | 0.503419 | 8_4:-19648044 | Msa1317930:CDS |
| CAATTGGGGAGAATATTGAT+TGG | 0.505833 | 8_4:-19648054 | Msa1317930:CDS |
| GGTAACTGTATCTATTGGTC+AGG | 0.517192 | 8_4:-19648602 | Msa1317930:CDS |
| TATTCTCTGCTTGATAGGTG+TGG | 0.524501 | 8_4:-19644990 | Msa1317930:CDS |
| AATTGCCCCATGCCACGTTA+CGG | 0.530299 | 8_4:-19648017 | Msa1317930:intron |
| TCCTGAAGGCTCACTTACCC+AGG | 0.535328 | 8_4:-19648446 | Msa1317930:intron |
| TCGTAGTATCAACTCCTCCT+CGG | 0.537412 | 8_4:+19648660 | None:intergenic |
| ATTGACTACTGAGGAATGGC+AGG | 0.540977 | 8_4:-19648710 | Msa1317930:five_prime_UTR |
| CTGATTCACACTGATAATCC+TGG | 0.544192 | 8_4:+19648573 | None:intergenic |
| AGAAGCATACCGCGGTGTGT+AGG | 0.549308 | 8_4:+19645257 | None:intergenic |
| AACACTGTGATGCCTAAACT+TGG | 0.552496 | 8_4:+19648507 | None:intergenic |
| TATGGCTTATCTGCTCCTGA+AGG | 0.552875 | 8_4:-19648460 | Msa1317930:CDS |
| GAGTGTCTATAGTGAGCAGA+AGG | 0.555582 | 8_4:-19648110 | Msa1317930:CDS |
| GAAAGTGACTCGTAGAGCAC+AGG | 0.564502 | 8_4:-19645837 | Msa1317930:CDS |
| AGTCAGTCCTACTGTTGCAT+TGG | 0.565606 | 8_4:-19647557 | Msa1317930:CDS |
| AACTGTATCTATTGGTCAGG+CGG | 0.577888 | 8_4:-19648599 | Msa1317930:CDS |
| AAAATGACTATCACATCTGT+CGG | 0.579311 | 8_4:+19645303 | None:intergenic |
| AGAGTTCCTCTCAGAACTAG+TGG | 0.581500 | 8_4:-19645328 | Msa1317930:CDS |
| AAAGATTGACTACTGAGGAA+TGG | 0.598038 | 8_4:-19648714 | Msa1317930:five_prime_UTR |
| CCCAAAATCAGAGCCACAGT+CGG | 0.621258 | 8_4:+19645088 | None:intergenic |
| TCTGCTTGATAGGTGTGGAA+TGG | 0.625312 | 8_4:-19644985 | Msa1317930:CDS |
| AAAGCCAGTCTGATGAGCAG+AGG | 0.628785 | 8_4:-19645166 | Msa1317930:CDS |
| GCTGTCTCCAATGCAACAGT+AGG | 0.631073 | 8_4:+19647550 | None:intergenic |
| AAGAGAAAGATTGACTACTG+AGG | 0.645847 | 8_4:-19648719 | None:intergenic |
| GATTATCAGTGTGAATCAGG+TGG | 0.654807 | 8_4:-19648569 | Msa1317930:CDS |
| AATTACCGTAACGTGGCATG+GGG | 0.656319 | 8_4:+19648012 | None:intergenic |
| AATCAGGTGGAACTTGTATG+TGG | 0.659756 | 8_4:-19648556 | Msa1317930:CDS |
| ATTCAGAAATTACCGTAACG+TGG | 0.710808 | 8_4:+19648005 | None:intergenic |
| TCGGAACCACTAGTTCTGAG+AGG | 0.717361 | 8_4:+19645322 | None:intergenic |
| TCATTTCACCCTACACACCG+CGG | 0.749166 | 8_4:-19645266 | Msa1317930:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAGTTATTAATTTTATAT+AGG | - | chr8_4:19646805-19646824 | Msa1317930:intron | 10.0% |
| !!! | AAACATTATTTTCAATTTAT+GGG | - | chr8_4:19648686-19648705 | Msa1317930:five_prime_UTR | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+TGG | - | chr8_4:19646862-19646881 | Msa1317930:intron | 100.0% |
| !! | TATAAAAAAACACATGATAT+AGG | + | chr8_4:19645273-19645292 | None:intergenic | 15.0% |
| !!! | TAAGCTTATTTTTATTTTAG+GGG | + | chr8_4:19645660-19645679 | None:intergenic | 15.0% |
| !!! | CTAAGCTTATTTTTATTTTA+GGG | + | chr8_4:19645661-19645680 | None:intergenic | 15.0% |
| !!! | TCTAAGCTTATTTTTATTTT+AGG | + | chr8_4:19645662-19645681 | None:intergenic | 15.0% |
| !! | TTATAACAGAGAAATAATTT+AGG | + | chr8_4:19646050-19646069 | None:intergenic | 15.0% |
| !! | TGAGATTAATTTATATCAAT+TGG | + | chr8_4:19646634-19646653 | None:intergenic | 15.0% |
| !! | AAATTAATCTCAACATTTAA+TGG | - | chr8_4:19646642-19646661 | Msa1317930:intron | 15.0% |
| !! | TTATATATATGAGAATTAGA+AGG | - | chr8_4:19646834-19646853 | Msa1317930:intron | 15.0% |
| !!! | AAATTTTTTTGGTTACAATT+GGG | - | chr8_4:19647237-19647256 | Msa1317930:intron | 15.0% |
| !! | AATAATTTAAGAAAATACCA+CGG | + | chr8_4:19648278-19648297 | None:intergenic | 15.0% |
| !!! | GAAACATTATTTTCAATTTA+TGG | - | chr8_4:19648685-19648704 | Msa1317930:five_prime_UTR | 15.0% |
| !! | GATGTATTACTAAAATTCTA+TGG | - | chr8_4:19645001-19645020 | Msa1317930:CDS | 20.0% |
| !!! | TATTTTGCTGAAATAACTAT+AGG | - | chr8_4:19645086-19645105 | Msa1317930:CDS | 20.0% |
| !!! | TTTTGCCTACATTATTTTTT+AGG | - | chr8_4:19645237-19645256 | Msa1317930:intron | 20.0% |
| !!! | AAAATAGAAGAAAAAGTACA+TGG | + | chr8_4:19645569-19645588 | None:intergenic | 20.0% |
| !!! | TGATTTTCTAATTTCATGAT+GGG | + | chr8_4:19645685-19645704 | None:intergenic | 20.0% |
| !!! | TTGATTTTCTAATTTCATGA+TGG | + | chr8_4:19645686-19645705 | None:intergenic | 20.0% |
| !! | CCTTCAATATAATAATCAAA+TGG | + | chr8_4:19646097-19646116 | None:intergenic | 20.0% |
| !! | CCATTTGATTATTATATTGA+AGG | - | chr8_4:19646094-19646113 | Msa1317930:intron | 20.0% |
| !!! | AAAAAAATGTCCTACTTTTA+GGG | + | chr8_4:19646253-19646272 | None:intergenic | 20.0% |
| !!! | AAAAAAAATGTCCTACTTTT+AGG | + | chr8_4:19646254-19646273 | None:intergenic | 20.0% |
| !! | AAAAATGAAACAGAAGAAAA+TGG | + | chr8_4:19646298-19646317 | None:intergenic | 20.0% |
| !!! | ACAACTTTTTGTTAATTGTA+GGG | - | chr8_4:19646927-19646946 | Msa1317930:intron | 20.0% |
| !!! | ATCTGTAAACTTTTCTTAAT+TGG | - | chr8_4:19647205-19647224 | Msa1317930:intron | 20.0% |
| !!! | TCTGTAAACTTTTCTTAATT+GGG | - | chr8_4:19647206-19647225 | Msa1317930:intron | 20.0% |
| !!! | CAAATTTTTTTGGTTACAAT+TGG | - | chr8_4:19647236-19647255 | Msa1317930:intron | 20.0% |
| !!! | TGTTTTAATTAAGGTGAATT+TGG | - | chr8_4:19647300-19647319 | Msa1317930:intron | 20.0% |
| !! | GAAAAAGAACAAAGTAATAA+CGG | + | chr8_4:19647709-19647728 | None:intergenic | 20.0% |
| !!! | TTTGTTCTTTTTCTATTTTC+TGG | - | chr8_4:19647716-19647735 | Msa1317930:intron | 20.0% |
| !! | ATCTAATAATTCAAGCATAT+TGG | + | chr8_4:19647843-19647862 | None:intergenic | 20.0% |
| !! | ATCTAATAATTCAAGCATAT+TGG | + | chr8_4:19647843-19647862 | None:intergenic | 20.0% |
| !!! | CAAGATTTTAATTGTGATTA+TGG | - | chr8_4:19648252-19648271 | Msa1317930:intron | 20.0% |
| !! | ATTATTTGGCTATCATAATT+TGG | + | chr8_4:19648435-19648454 | None:intergenic | 20.0% |
| !!! | ATAAACATTTTCCTCTTTTT+CGG | + | chr8_4:19648472-19648491 | None:intergenic | 20.0% |
| ! | AAATAATTATGCAACTTCCA+AGG | + | chr8_4:19645071-19645090 | None:intergenic | 25.0% |
| ! | GAACTCAAATGTAAGTTAAA+CGG | + | chr8_4:19645198-19645217 | None:intergenic | 25.0% |
| ! | GATCACCTAAAAAATAATGT+AGG | + | chr8_4:19645245-19645264 | None:intergenic | 25.0% |
| !! | AAGAAAAAGTACATGGAAAA+AGG | + | chr8_4:19645562-19645581 | None:intergenic | 25.0% |
| !!! | ATTTTTATTTTAGGGGAAGT+GGG | + | chr8_4:19645653-19645672 | None:intergenic | 25.0% |
| !!! | TATTTTTATTTTAGGGGAAG+TGG | + | chr8_4:19645654-19645673 | None:intergenic | 25.0% |
| !!! | TTATCCTTGTATTTGACTTT+TGG | - | chr8_4:19645971-19645990 | Msa1317930:intron | 25.0% |
| ! | TAATCCAAAAGTCAAATACA+AGG | + | chr8_4:19645978-19645997 | None:intergenic | 25.0% |
| ! | CAAAAACTAAGTGATTGTAA+AGG | - | chr8_4:19646007-19646026 | Msa1317930:intron | 25.0% |
| !! | ACTAAAAAGACGTACATTTT+AGG | + | chr8_4:19646361-19646380 | None:intergenic | 25.0% |
| !! | GACATTTGTAGAGATATTTT+AGG | + | chr8_4:19646566-19646585 | None:intergenic | 25.0% |
| !! | AAAAAGTTGTGTTTTATGCA+GGG | + | chr8_4:19646917-19646936 | None:intergenic | 25.0% |
| !! | CACAACTTTTTGTTAATTGT+AGG | - | chr8_4:19646926-19646945 | Msa1317930:intron | 25.0% |
| ! | TATCACCTCAAGTATAATTA+TGG | - | chr8_4:19647136-19647155 | Msa1317930:intron | 25.0% |
| !!! | GGGACTATTACAAATTTTTT+TGG | - | chr8_4:19647226-19647245 | Msa1317930:intron | 25.0% |
| !!! | AACACTGTTAACTTTTTCAT+AGG | + | chr8_4:19647805-19647824 | None:intergenic | 25.0% |
| !!! | ATGTGATAGTCATTTTCTTT+TGG | - | chr8_4:19648183-19648202 | Msa1317930:intron | 25.0% |
| !!! | AGTCATTTTCTTTTGGATTT+TGG | - | chr8_4:19648190-19648209 | Msa1317930:intron | 25.0% |
| ! | AAATTATTCAGTATTCTCAC+AGG | - | chr8_4:19648290-19648309 | Msa1317930:intron | 25.0% |
| !! | TATTCTCGATTTTACATTAC+TGG | - | chr8_4:19648345-19648364 | Msa1317930:intron | 25.0% |
| ! | TTTCTGGTAACTGTATCTAT+TGG | - | chr8_4:19644872-19644891 | Msa1317930:intron | 30.0% |
| AAATAGTAGAGCTTGAAGAA+AGG | + | chr8_4:19645220-19645239 | None:intergenic | 30.0% | |
| ! | GAATATTGATTGGAGATTGT+CGG | - | chr8_4:19645435-19645454 | Msa1317930:intron | 30.0% |
| !!! | AGGAAGATAAGGGATTTTTT+GGG | + | chr8_4:19645542-19645561 | None:intergenic | 30.0% |
| !!! | AAGGAAGATAAGGGATTTTT+TGG | + | chr8_4:19645543-19645562 | None:intergenic | 30.0% |
| ACATGGAAAAAGGAAGATAA+GGG | + | chr8_4:19645552-19645571 | None:intergenic | 30.0% | |
| TACATGGAAAAAGGAAGATA+AGG | + | chr8_4:19645553-19645572 | None:intergenic | 30.0% | |
| ATTGAATAAGATCCTTCTCT+TGG | - | chr8_4:19645610-19645629 | Msa1317930:intron | 30.0% | |
| TTCATAATTAGACCAAGAGA+AGG | + | chr8_4:19645625-19645644 | None:intergenic | 30.0% | |
| ! | GAATATTTCTGCAATGCATT+TGG | - | chr8_4:19645731-19645750 | Msa1317930:intron | 30.0% |
| ! | GCATTTTAAATTTTAGACCC+AGG | - | chr8_4:19645758-19645777 | Msa1317930:intron | 30.0% |
| !!! | TCTTTCTTACTCTTGTTTTC+AGG | - | chr8_4:19645847-19645866 | Msa1317930:CDS | 30.0% |
| TAATTTAGGAATCCAAACAG+TGG | + | chr8_4:19646036-19646055 | None:intergenic | 30.0% | |
| ! | AATTTTAAGCCACAAACACA+AGG | + | chr8_4:19646138-19646157 | None:intergenic | 30.0% |
| ! | ATGCTACTGCTTTAAGTATT+AGG | - | chr8_4:19646181-19646200 | Msa1317930:intron | 30.0% |
| ! | TTTAAGTATTAGGTCTTGTG+CGG | - | chr8_4:19646191-19646210 | Msa1317930:intron | 30.0% |
| TCTTGTGCGGTTATATAATT+AGG | - | chr8_4:19646204-19646223 | Msa1317930:intron | 30.0% | |
| TCCAGAAATATATTAAGCTG+AGG | - | chr8_4:19646411-19646430 | Msa1317930:intron | 30.0% | |
| CCAGAAATATATTAAGCTGA+GGG | - | chr8_4:19646412-19646431 | Msa1317930:intron | 30.0% | |
| TATGAGAATTAGAAGGAAAG+AGG | - | chr8_4:19646841-19646860 | Msa1317930:intron | 30.0% | |
| ATGAGAATTAGAAGGAAAGA+GGG | - | chr8_4:19646842-19646861 | Msa1317930:intron | 30.0% | |
| ! | CAAAAAGTTGTGTTTTATGC+AGG | + | chr8_4:19646918-19646937 | None:intergenic | 30.0% |
| TAGAAACTCCATTACAAAGA+TGG | - | chr8_4:19646986-19647005 | Msa1317930:intron | 30.0% | |
| CATCTCCATAATTATACTTG+AGG | + | chr8_4:19647144-19647163 | None:intergenic | 30.0% | |
| CTCAAGTATAATTATGGAGA+TGG | - | chr8_4:19647142-19647161 | Msa1317930:intron | 30.0% | |
| AAGTATAATTATGGAGATGG+AGG | - | chr8_4:19647145-19647164 | Msa1317930:intron | 30.0% | |
| AGTATAATTATGGAGATGGA+GGG | - | chr8_4:19647146-19647165 | Msa1317930:intron | 30.0% | |
| ! | GAGTCTGAAATTTCTCAATT+GGG | - | chr8_4:19647360-19647379 | Msa1317930:intron | 30.0% |
| !! | TTTTATTTGCTGCAAAAGTC+TGG | + | chr8_4:19647471-19647490 | None:intergenic | 30.0% |
| ! | AAAGAGTATAAAGCTACAAC+AGG | + | chr8_4:19647574-19647593 | None:intergenic | 30.0% |
| !! | TTGTAGCTTTATACTCTTTC+TGG | - | chr8_4:19647575-19647594 | Msa1317930:CDS | 30.0% |
| ! | AGTTATCGGTTAAACAAGTT+AGG | + | chr8_4:19647601-19647620 | None:intergenic | 30.0% |
| !! | TAACTTGTTTAACCGATAAC+TGG | - | chr8_4:19647600-19647619 | Msa1317930:CDS | 30.0% |
| !!! | GCAATTTCAAATGGTTTTAG+AGG | - | chr8_4:19647666-19647685 | Msa1317930:intron | 30.0% |
| !! | TAATTCAAGCATATTGGTTC+TGG | + | chr8_4:19647884-19647903 | None:intergenic | 30.0% |
| TTAATCCTCACAAATTCCTT+AGG | + | chr8_4:19647943-19647962 | None:intergenic | 30.0% | |
| GGAATTTGTGAGGATTAAAA+TGG | - | chr8_4:19647945-19647964 | Msa1317930:intron | 30.0% | |
| AAAATGACTATCACATCTGT+CGG | + | chr8_4:19648179-19648198 | None:intergenic | 30.0% | |
| ! | TAGTGGATGAGTTCATTATT+TGG | + | chr8_4:19648449-19648468 | None:intergenic | 30.0% |
| ATGTTTATTCTCTGCTTGAT+AGG | - | chr8_4:19648484-19648503 | Msa1317930:CDS | 30.0% | |
| AAAGATTGACTACTGAGGAA+TGG | - | chr8_4:19644765-19644784 | Msa1317930:intron | 35.0% | |
| TAGATACAGTTACCAGAAAC+TGG | + | chr8_4:19644871-19644890 | None:intergenic | 35.0% | |
| TTGATGTGTCAACCAAGTTT+AGG | - | chr8_4:19644960-19644979 | Msa1317930:intron | 35.0% | |
| ! | TTCGCTAGTTCTTACTTCTT+GGG | - | chr8_4:19645333-19645352 | Msa1317930:CDS | 35.0% |
| CAATCAATATTCTCCCCAAT+TGG | + | chr8_4:19645427-19645446 | None:intergenic | 35.0% | |
| CAATTGGGGAGAATATTGAT+TGG | - | chr8_4:19645425-19645444 | Msa1317930:intron | 35.0% | |
| ATTCAGAAATTACCGTAACG+TGG | + | chr8_4:19645477-19645496 | None:intergenic | 35.0% | |
| TCAGAAAGAATGTAACACCT+GGG | + | chr8_4:19645778-19645797 | None:intergenic | 35.0% | |
| TTCAGAAAGAATGTAACACC+TGG | + | chr8_4:19645779-19645798 | None:intergenic | 35.0% | |
| ! | GTGTTACATTCTTTCTGAAG+TGG | - | chr8_4:19645780-19645799 | Msa1317930:intron | 35.0% |
| GGAAAATTTGCACTGCTTAA+AGG | - | chr8_4:19645801-19645820 | Msa1317930:intron | 35.0% | |
| AAAGGCTTGAAATCACATCA+TGG | - | chr8_4:19645819-19645838 | Msa1317930:CDS | 35.0% | |
| !!! | CTCTTGTTTTCAGGTTTTGA+TGG | - | chr8_4:19645856-19645875 | Msa1317930:intron | 35.0% |
| !! | GCTTTAAAAACTCAAAGACG+CGG | + | chr8_4:19645892-19645911 | None:intergenic | 35.0% |
| !! | GCGTCTTTGAGTTTTTAAAG+CGG | - | chr8_4:19645891-19645910 | Msa1317930:intron | 35.0% |
| GAAGATTCAATATATACCCG+TGG | - | chr8_4:19646226-19646245 | Msa1317930:intron | 35.0% | |
| !! | TATATTTCTGGATCCTTCTC+TGG | + | chr8_4:19646403-19646422 | None:intergenic | 35.0% |
| CCCTCAGCTTAATATATTTC+TGG | + | chr8_4:19646415-19646434 | None:intergenic | 35.0% | |
| GCATCATGGAATGATTTGAT+AGG | + | chr8_4:19646525-19646544 | None:intergenic | 35.0% | |
| ! | TTCCATGATGCCAATTTTCT+CGG | - | chr8_4:19646534-19646553 | Msa1317930:intron | 35.0% |
| TGAGAATTAGAAGGAAAGAG+GGG | - | chr8_4:19646843-19646862 | Msa1317930:intron | 35.0% | |
| AAACTCCATTACAAAGATGG+AGG | - | chr8_4:19646989-19647008 | Msa1317930:intron | 35.0% | |
| AACTCCATTACAAAGATGGA+GGG | - | chr8_4:19646990-19647009 | Msa1317930:intron | 35.0% | |
| GGACTATTACAATGTGAACA+GGG | - | chr8_4:19647258-19647277 | Msa1317930:intron | 35.0% | |
| ! | CGAGTCTGAAATTTCTCAAT+TGG | - | chr8_4:19647359-19647378 | Msa1317930:intron | 35.0% |
| GAAATTTCTCAATTGGGTAG+AGG | - | chr8_4:19647366-19647385 | Msa1317930:intron | 35.0% | |
| ! | TCCATTGTAAGTTTTTGCTG+AGG | - | chr8_4:19647401-19647420 | Msa1317930:intron | 35.0% |
| ACCTCAGCAAAAACTTACAA+TGG | + | chr8_4:19647405-19647424 | None:intergenic | 35.0% | |
| ! | TTGTAAGTTTTTGCTGAGGT+TGG | - | chr8_4:19647405-19647424 | Msa1317930:intron | 35.0% |
| TTGTTTAACCGATAACTGGA+AGG | - | chr8_4:19647604-19647623 | Msa1317930:CDS | 35.0% | |
| TGTTTAACCGATAACTGGAA+GGG | - | chr8_4:19647605-19647624 | Msa1317930:CDS | 35.0% | |
| !!! | TGGTTTTAGAGGAAAAAAGC+AGG | - | chr8_4:19647677-19647696 | Msa1317930:intron | 35.0% |
| GGTATGAACATTGAAAAGAG+AGG | + | chr8_4:19647784-19647803 | None:intergenic | 35.0% | |
| ATTCAAGCATATTGGATCAC+TGG | + | chr8_4:19647835-19647854 | None:intergenic | 35.0% | |
| AATTCCTTAGGAAAAGCTTC+TGG | + | chr8_4:19647931-19647950 | None:intergenic | 35.0% | |
| ! | CTTTTCCTAAGGAATTTGTG+AGG | - | chr8_4:19647935-19647954 | Msa1317930:intron | 35.0% |
| TTTAATTGTGATTATGGCCG+TGG | - | chr8_4:19648258-19648277 | Msa1317930:intron | 35.0% | |
| !!! | ATTTTCCTCTTTTTCGGTAG+TGG | + | chr8_4:19648466-19648485 | None:intergenic | 35.0% |
| ! | AATGGCAGTACTTGTTAATC+AGG | - | chr8_4:19648512-19648531 | Msa1317930:CDS | 35.0% |
| TGCAAAAGATGCGCAGAATA+TGG | - | chr8_4:19644844-19644863 | Msa1317930:intron | 40.0% | |
| GGTAACTGTATCTATTGGTC+AGG | - | chr8_4:19644877-19644896 | Msa1317930:intron | 40.0% | |
| AACTGTATCTATTGGTCAGG+CGG | - | chr8_4:19644880-19644899 | Msa1317930:intron | 40.0% | |
| CTGATTCACACTGATAATCC+TGG | + | chr8_4:19644909-19644928 | None:intergenic | 40.0% | |
| CAGGATTATCAGTGTGAATC+AGG | - | chr8_4:19644907-19644926 | Msa1317930:intron | 40.0% | |
| GATTATCAGTGTGAATCAGG+TGG | - | chr8_4:19644910-19644929 | Msa1317930:intron | 40.0% | |
| AATCAGGTGGAACTTGTATG+TGG | - | chr8_4:19644923-19644942 | Msa1317930:intron | 40.0% | |
| AACACTGTGATGCCTAAACT+TGG | + | chr8_4:19644975-19644994 | None:intergenic | 40.0% | |
| CAAGGAAAAGAAGCAAACCT+GGG | + | chr8_4:19645053-19645072 | None:intergenic | 40.0% | |
| ! | GTTCGCTAGTTCTTACTTCT+TGG | - | chr8_4:19645332-19645351 | Msa1317930:CDS | 40.0% |
| !! | AGTTTTGTGCACTTGCCAAT+TGG | - | chr8_4:19645409-19645428 | Msa1317930:intron | 40.0% |
| ! | GTTTTGTGCACTTGCCAATT+GGG | - | chr8_4:19645410-19645429 | Msa1317930:intron | 40.0% |
| ! | TTTTGTGCACTTGCCAATTG+GGG | - | chr8_4:19645411-19645430 | Msa1317930:intron | 40.0% |
| AAATTACCGTAACGTGGCAT+GGG | + | chr8_4:19645471-19645490 | None:intergenic | 40.0% | |
| GCTTGAAATCACATCATGGA+GGG | - | chr8_4:19645823-19645842 | Msa1317930:CDS | 40.0% | |
| !!! | TGAGTTTTTAAAGCGGAGCA+AGG | - | chr8_4:19645898-19645917 | Msa1317930:intron | 40.0% |
| TTGTAAAGGAAGCCACTGTT+TGG | - | chr8_4:19646021-19646040 | Msa1317930:intron | 40.0% | |
| TAGGAGTTGACCGAGAAAAT+TGG | + | chr8_4:19646547-19646566 | None:intergenic | 40.0% | |
| GAGAATTAGAAGGAAAGAGG+GGG | - | chr8_4:19646844-19646863 | Msa1317930:intron | 40.0% | |
| AGAATTAGAAGGAAAGAGGG+GGG | - | chr8_4:19646845-19646864 | Msa1317930:intron | 40.0% | |
| TTATGCAGGGACGAATATAG+AGG | + | chr8_4:19646904-19646923 | None:intergenic | 40.0% | |
| AACTCCCTCCATCTTTGTAA+TGG | + | chr8_4:19646997-19647016 | None:intergenic | 40.0% | |
| TACTTGAGGTGATATCTCAG+TGG | + | chr8_4:19647130-19647149 | None:intergenic | 40.0% | |
| GGGACTATTACAATGTGAAC+AGG | - | chr8_4:19647257-19647276 | Msa1317930:intron | 40.0% | |
| GCAAAAGTCTGGATAAAGGA+AGG | + | chr8_4:19647460-19647479 | None:intergenic | 40.0% | |
| TGCTGCAAAAGTCTGGATAA+AGG | + | chr8_4:19647464-19647483 | None:intergenic | 40.0% | |
| TTTCCCCAGCATGTATTGAA+TGG | - | chr8_4:19647545-19647564 | Msa1317930:CDS | 40.0% | |
| TTCCCCAGCATGTATTGAAT+GGG | - | chr8_4:19647546-19647565 | Msa1317930:CDS | 40.0% | |
| AGCACAGGAGCAATTTCAAA+TGG | - | chr8_4:19647657-19647676 | Msa1317930:intron | 40.0% | |
| !! | AGAGGTATCAACGAAACAAC+AGG | + | chr8_4:19647766-19647785 | None:intergenic | 40.0% |
| TAGATATCCTGAGTGAGATG+TGG | - | chr8_4:19647858-19647877 | Msa1317930:intron | 40.0% | |
| TAGATATCCTGAGTGAGATG+TGG | - | chr8_4:19647858-19647877 | Msa1317930:intron | 40.0% | |
| CTGAGAGGAACTCTTACTTT+AGG | + | chr8_4:19648145-19648164 | None:intergenic | 40.0% | |
| !! | TGATTTTGGGAGTTGCAGTT+TGG | - | chr8_4:19648404-19648423 | Msa1317930:intron | 40.0% |
| TATTCTCTGCTTGATAGGTG+TGG | - | chr8_4:19648489-19648508 | Msa1317930:CDS | 40.0% | |
| ATTGACTACTGAGGAATGGC+AGG | - | chr8_4:19644769-19644788 | Msa1317930:intron | 45.0% | |
| ! | GTTACTAAGTTTTCAGCCCG+AGG | - | chr8_4:19644802-19644821 | Msa1317930:intron | 45.0% |
| TCGTAGTATCAACTCCTCCT+CGG | + | chr8_4:19644822-19644841 | None:intergenic | 45.0% | |
| GCAGAATATGGTCCAGTTTC+TGG | - | chr8_4:19644856-19644875 | Msa1317930:intron | 45.0% | |
| TATGGCTTATCTGCTCCTGA+AGG | - | chr8_4:19645019-19645038 | Msa1317930:CDS | 45.0% | |
| CCAAGGAAAAGAAGCAAACC+TGG | + | chr8_4:19645054-19645073 | None:intergenic | 45.0% | |
| !! | CCAGGTTTGCTTCTTTTCCT+TGG | - | chr8_4:19645051-19645070 | Msa1317930:CDS | 45.0% |
| CACATATGTGTGCGCGTATA+AGG | + | chr8_4:19645163-19645182 | None:intergenic | 45.0% | |
| GAGTGTCTATAGTGAGCAGA+AGG | - | chr8_4:19645369-19645388 | Msa1317930:intron | 45.0% | |
| GCAGAAGGTGAATGCTTTAG+TGG | - | chr8_4:19645384-19645403 | Msa1317930:intron | 45.0% | |
| AATTACCGTAACGTGGCATG+GGG | + | chr8_4:19645470-19645489 | None:intergenic | 45.0% | |
| GAAATTACCGTAACGTGGCA+TGG | + | chr8_4:19645472-19645491 | None:intergenic | 45.0% | |
| GGCTTGAAATCACATCATGG+AGG | - | chr8_4:19645822-19645841 | Msa1317930:CDS | 45.0% | |
| AGTCAGTCCTACTGTTGCAT+TGG | - | chr8_4:19645922-19645941 | Msa1317930:intron | 45.0% | |
| !! | ACTTGCTGTCCTTGTGTTTG+TGG | - | chr8_4:19646126-19646145 | Msa1317930:intron | 45.0% |
| AGTAGCATGCAACAATGCAG+TGG | + | chr8_4:19646169-19646188 | None:intergenic | 45.0% | |
| !! | TGTCCTACTTTTAGGGACCA+CGG | + | chr8_4:19646246-19646265 | None:intergenic | 45.0% |
| !! | CTGGTTTGATGGACTCAACA+AGG | + | chr8_4:19646384-19646403 | None:intergenic | 45.0% |
| TGAGTCCATCAAACCAGAGA+AGG | - | chr8_4:19646387-19646406 | Msa1317930:intron | 45.0% | |
| ! | TGGATCCTTCTCTGGTTTGA+TGG | + | chr8_4:19646395-19646414 | None:intergenic | 45.0% |
| GACCGAGAAAATTGGCATCA+TGG | + | chr8_4:19646539-19646558 | None:intergenic | 45.0% | |
| GAATTAGAAGGAAAGAGGGG+GGG | - | chr8_4:19646846-19646865 | Msa1317930:intron | 45.0% | |
| AATTAGAAGGAAAGAGGGGG+GGG | - | chr8_4:19646847-19646866 | Msa1317930:intron | 45.0% | |
| ! | CATTTTACATCCGACCCCTA+GGG | - | chr8_4:19647064-19647083 | Msa1317930:intron | 45.0% |
| ! | ATTTTACATCCGACCCCTAG+GGG | - | chr8_4:19647065-19647084 | Msa1317930:intron | 45.0% |
| TACCGAGTTAAATCCCCTAG+GGG | + | chr8_4:19647081-19647100 | None:intergenic | 45.0% | |
| GTACCGAGTTAAATCCCCTA+GGG | + | chr8_4:19647082-19647101 | None:intergenic | 45.0% | |
| GGGATTTAACTCGGTACCTT+AGG | - | chr8_4:19647085-19647104 | Msa1317930:intron | 45.0% | |
| !!! | TGGAGGGAGAGTTTTAAGAG+AGG | - | chr8_4:19647162-19647181 | Msa1317930:intron | 45.0% |
| !! | ATCTCTCTGGCCTTAGAAGA+GGG | - | chr8_4:19647430-19647449 | Msa1317930:intron | 45.0% |
| TCCCCAGCATGTATTGAATG+GGG | - | chr8_4:19647547-19647566 | Msa1317930:CDS | 45.0% | |
| TCCCCATTCAATACATGCTG+GGG | + | chr8_4:19647551-19647570 | None:intergenic | 45.0% | |
| GTCCCCATTCAATACATGCT+GGG | + | chr8_4:19647552-19647571 | None:intergenic | 45.0% | |
| TCATCTGCCCTTCCAGTTAT+CGG | + | chr8_4:19647615-19647634 | None:intergenic | 45.0% | |
| AGAGTTCCTCTCAGAACTAG+TGG | - | chr8_4:19648151-19648170 | Msa1317930:intron | 45.0% | |
| !!! | GCTGCATTTTTTACCGACTG+TGG | - | chr8_4:19648378-19648397 | Msa1317930:intron | 45.0% |
| CTCATCCACTACCGAAAAAG+AGG | - | chr8_4:19648458-19648477 | Msa1317930:CDS | 45.0% | |
| TCTGCTTGATAGGTGTGGAA+TGG | - | chr8_4:19648494-19648513 | Msa1317930:CDS | 45.0% | |
| !!! | TTTTTTTTAATTAATTAAAG+TGG | - | chr8_4:19647031-19647050 | Msa1317930:intron | 5.0% |
| !!! | AAACATTAATATTTTTTAAT+TGG | + | chr8_4:19647285-19647304 | None:intergenic | 5.0% |
| !!! | AAATATTAATGTTTTAATTA+AGG | - | chr8_4:19647291-19647310 | Msa1317930:intron | 5.0% |
| !! | TAAAATAAAACAATTATTTA+AGG | - | chr8_4:19647491-19647510 | Msa1317930:intron | 5.0% |
| ! | ACTAAGTTTTCAGCCCGAGG+AGG | - | chr8_4:19644805-19644824 | Msa1317930:intron | 50.0% |
| CGTAGTATCAACTCCTCCTC+GGG | + | chr8_4:19644821-19644840 | None:intergenic | 50.0% | |
| AATTGCCCCATGCCACGTTA+CGG | - | chr8_4:19645462-19645481 | Msa1317930:intron | 50.0% | |
| GCTGTCTCCAATGCAACAGT+AGG | + | chr8_4:19645932-19645951 | None:intergenic | 50.0% | |
| TACCCGTGGTCCCTAAAAGT+AGG | - | chr8_4:19646240-19646259 | Msa1317930:intron | 50.0% | |
| !! | GTCCTACTTTTAGGGACCAC+GGG | + | chr8_4:19646245-19646264 | None:intergenic | 50.0% |
| ATTAGAAGGAAAGAGGGGGG+GGG | - | chr8_4:19646848-19646867 | Msa1317930:intron | 50.0% | |
| GCAGGGACGAATATAGAGGA+GGG | + | chr8_4:19646900-19646919 | None:intergenic | 50.0% | |
| TGCAGGGACGAATATAGAGG+AGG | + | chr8_4:19646901-19646920 | None:intergenic | 50.0% | |
| CCTAGGGGTCGGATGTAAAA+TGG | + | chr8_4:19647066-19647085 | None:intergenic | 50.0% | |
| ! | CCATTTTACATCCGACCCCT+AGG | - | chr8_4:19647063-19647082 | Msa1317930:intron | 50.0% |
| GAGTTAAATCCCCTAGGGGT+CGG | + | chr8_4:19647077-19647096 | None:intergenic | 50.0% | |
| GACCCCTAGGGGATTTAACT+CGG | - | chr8_4:19647076-19647095 | Msa1317930:intron | 50.0% | |
| ! | GGTACCGAGTTAAATCCCCT+AGG | + | chr8_4:19647083-19647102 | None:intergenic | 50.0% |
| ! | ACTCGGTACCTTAGGTTGCA+AGG | - | chr8_4:19647093-19647112 | Msa1317930:intron | 50.0% |
| !! | GAGCTTAGCCTTGCAACCTA+AGG | + | chr8_4:19647104-19647123 | None:intergenic | 50.0% |
| !! | GATCTCTCTGGCCTTAGAAG+AGG | - | chr8_4:19647429-19647448 | Msa1317930:intron | 50.0% |
| GGTCCCCATTCAATACATGC+TGG | + | chr8_4:19647553-19647572 | None:intergenic | 50.0% | |
| GAAAGTGACTCGTAGAGCAC+AGG | - | chr8_4:19647642-19647661 | Msa1317930:intron | 50.0% | |
| ! | GTGGCCAGAAGCTTTTCCTA+AGG | - | chr8_4:19647924-19647943 | Msa1317930:intron | 50.0% |
| !! | TCGGAACCACTAGTTCTGAG+AGG | + | chr8_4:19648160-19648179 | None:intergenic | 50.0% |
| TCATTTCACCCTACACACCG+CGG | - | chr8_4:19648213-19648232 | Msa1317930:intron | 50.0% | |
| ! | GTCACTCAAGAAGCATACCG+CGG | + | chr8_4:19648233-19648252 | None:intergenic | 50.0% |
| AAAGCCAGTCTGATGAGCAG+AGG | - | chr8_4:19648313-19648332 | Msa1317930:intron | 50.0% | |
| !!! | ACCGACTGTGGCTCTGATTT+TGG | - | chr8_4:19648390-19648409 | Msa1317930:intron | 50.0% |
| CCCAAAATCAGAGCCACAGT+CGG | + | chr8_4:19648394-19648413 | None:intergenic | 50.0% | |
| !!! | CCGACTGTGGCTCTGATTTT+GGG | - | chr8_4:19648391-19648410 | Msa1317930:intron | 50.0% |
| TCCTGAAGGCTCACTTACCC+AGG | - | chr8_4:19645033-19645052 | Msa1317930:CDS | 55.0% | |
| ACCTGGGTAAGTGAGCCTTC+AGG | + | chr8_4:19645037-19645056 | None:intergenic | 55.0% | |
| GGAGACAGCTACTGCTTTGC+AGG | - | chr8_4:19645943-19645962 | Msa1317930:intron | 55.0% | |
| TTAGAAGGAAAGAGGGGGGG+GGG | - | chr8_4:19646849-19646868 | Msa1317930:intron | 55.0% | |
| ATATAGAGGAGGGCGGGCAT+GGG | + | chr8_4:19646890-19646909 | None:intergenic | 55.0% | |
| AATATAGAGGAGGGCGGGCA+TGG | + | chr8_4:19646891-19646910 | None:intergenic | 55.0% | |
| GGACGAATATAGAGGAGGGC+GGG | + | chr8_4:19646896-19646915 | None:intergenic | 55.0% | |
| GGGACGAATATAGAGGAGGG+CGG | + | chr8_4:19646897-19646916 | None:intergenic | 55.0% | |
| !! | GCTGAGGTTGGTGATCTCTC+TGG | - | chr8_4:19647417-19647436 | Msa1317930:intron | 55.0% |
| GTTCTGGCCACATCTCACTC+AGG | + | chr8_4:19647868-19647887 | None:intergenic | 55.0% | |
| CTTCTGGCCACATCTCACTC+AGG | + | chr8_4:19647915-19647934 | None:intergenic | 55.0% | |
| GAAGCATACCGCGGTGTGTA+GGG | + | chr8_4:19648224-19648243 | None:intergenic | 55.0% | |
| ! | AGAAGCATACCGCGGTGTGT+AGG | + | chr8_4:19648225-19648244 | None:intergenic | 55.0% |
| TCTGCCTCTGCTCATCAGAC+TGG | + | chr8_4:19648320-19648339 | None:intergenic | 55.0% | |
| TAGAAGGAAAGAGGGGGGGG+GGG | - | chr8_4:19646850-19646869 | Msa1317930:intron | 60.0% | |
| ! | GGAAGGCACGCCCTCTTCTA+AGG | + | chr8_4:19647443-19647462 | None:intergenic | 60.0% |
| CTATTGGTCAGGCGGCTGCC+AGG | - | chr8_4:19644888-19644907 | Msa1317930:intron | 65.0% | |
| AGAAGGAAAGAGGGGGGGGG+GGG | - | chr8_4:19646851-19646870 | Msa1317930:intron | 65.0% | |
| GAAGGAAAGAGGGGGGGGGG+GGG | - | chr8_4:19646852-19646871 | Msa1317930:intron | 70.0% | |
| AAGGAAAGAGGGGGGGGGGG+GGG | - | chr8_4:19646853-19646872 | Msa1317930:intron | 70.0% | |
| AGGAAAGAGGGGGGGGGGGG+GGG | - | chr8_4:19646854-19646873 | Msa1317930:intron | 75.0% | |
| ! | GGAAAGAGGGGGGGGGGGGG+GGG | - | chr8_4:19646855-19646874 | Msa1317930:intron | 80.0% |
| ! | GAAAGAGGGGGGGGGGGGGG+GGG | - | chr8_4:19646856-19646875 | Msa1317930:intron | 80.0% |
| ! | AAAGAGGGGGGGGGGGGGGG+GGG | - | chr8_4:19646857-19646876 | Msa1317930:intron | 80.0% |
| ! | AAGAGGGGGGGGGGGGGGGG+GGG | - | chr8_4:19646858-19646877 | Msa1317930:intron | 85.0% |
| ! | AGAGGGGGGGGGGGGGGGGG+GGG | - | chr8_4:19646859-19646878 | Msa1317930:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGGGGT+GGG | - | chr8_4:19646863-19646882 | Msa1317930:intron | 95.0% |
| ! | GGGGGGGGGGGGGGGGGGTG+GGG | - | chr8_4:19646864-19646883 | Msa1317930:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 19644764 | 19648737 | 19644764 | ID=Msa1317930;Name=Msa1317930 |
| chr8_4 | mRNA | 19644764 | 19648737 | 19644764 | ID=Msa1317930-mRNA-1;Parent=Msa1317930;Name=Msa1317930-mRNA-1;_AED=0.00;_eAED=0.00;_QI=99|0.83|0.85|0.85|1|1|7|0|272 |
| chr8_4 | exon | 19644764 | 19644769 | 19644764 | ID=Msa1317930-mRNA-1:exon:7224;Parent=Msa1317930-mRNA-1 |
| chr8_4 | exon | 19644968 | 19645189 | 19644968 | ID=Msa1317930-mRNA-1:exon:7223;Parent=Msa1317930-mRNA-1 |
| chr8_4 | exon | 19645267 | 19645387 | 19645267 | ID=Msa1317930-mRNA-1:exon:7222;Parent=Msa1317930-mRNA-1 |
| chr8_4 | exon | 19645803 | 19645870 | 19645803 | ID=Msa1317930-mRNA-1:exon:7221;Parent=Msa1317930-mRNA-1 |
| chr8_4 | exon | 19647537 | 19647632 | 19647537 | ID=Msa1317930-mRNA-1:exon:7220;Parent=Msa1317930-mRNA-1 |
| chr8_4 | exon | 19648018 | 19648131 | 19648018 | ID=Msa1317930-mRNA-1:exon:7219;Parent=Msa1317930-mRNA-1 |
| chr8_4 | exon | 19648447 | 19648737 | 19648447 | ID=Msa1317930-mRNA-1:exon:7218;Parent=Msa1317930-mRNA-1 |
| chr8_4 | five_prime_UTR | 19648639 | 19648737 | 19648639 | ID=Msa1317930-mRNA-1:five_prime_utr;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19648447 | 19648638 | 19648447 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19648018 | 19648131 | 19648018 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19647537 | 19647632 | 19647537 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19645803 | 19645870 | 19645803 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19645267 | 19645387 | 19645267 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19644968 | 19645189 | 19644968 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| chr8_4 | CDS | 19644764 | 19644769 | 19644764 | ID=Msa1317930-mRNA-1:cds;Parent=Msa1317930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
