AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1249310


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249310 MtrunA17_Chr8g0364891 99.789 473 1 0 1 473 1 473 0.0 984
Msa1249310 MtrunA17_Chr5g0413831 91.755 473 39 0 1 473 1 473 0.0 917
Msa1249310 MtrunA17_Chr2g0320721 33.191 470 293 10 6 458 4 469 9.61e-75 253
Msa1249310 MtrunA17_Chr8g0369781 26.106 452 327 4 4 452 19 466 5.48e-50 183
Msa1249310 MtrunA17_Chr8g0391151 24.524 420 286 8 10 423 18 412 8.95e-29 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1249310 AT1G60070.1 84.567 473 73 0 1 473 1 473 0.0 860
Msa1249310 AT1G60070.2 84.567 473 73 0 1 473 1 473 0.0 860
Msa1249310 AT1G23900.1 82.241 473 84 0 1 473 1 473 0.0 815
Msa1249310 AT1G23900.2 82.241 473 84 0 1 473 1 473 0.0 815
Msa1249310 AT1G23900.3 82.213 461 82 0 13 473 1 461 0.0 792
Msa1249310 AT1G23935.3 74.729 277 58 2 11 287 871 1135 1.18e-131 410
Msa1249310 AT1G23935.2 74.729 277 58 2 11 287 872 1136 1.20e-131 410
Msa1249310 AT1G23935.1 74.729 277 58 2 11 287 922 1186 1.72e-131 411
Msa1249310 AT5G22770.5 31.702 470 300 10 6 458 2 467 5.11e-72 246
Msa1249310 AT5G22770.1 31.702 470 300 10 6 458 2 467 5.11e-72 246
Msa1249310 AT5G22770.4 31.702 470 300 10 6 458 2 467 5.11e-72 246
Msa1249310 AT5G22770.6 31.702 470 300 10 6 458 2 467 5.11e-72 246
Msa1249310 AT5G22770.2 31.702 470 300 10 6 458 2 467 5.11e-72 246
Msa1249310 AT5G22770.3 31.702 470 300 10 6 458 2 467 5.11e-72 246
Msa1249310 AT5G22780.2 31.702 470 300 10 6 458 2 467 6.48e-72 246
Msa1249310 AT5G22780.1 31.702 470 300 10 6 458 2 467 6.48e-72 246
Msa1249310 AT1G31730.1 26.991 452 323 4 4 452 19 466 1.20e-56 202
Msa1249310 AT1G48760.2 25.000 428 274 10 10 423 17 411 2.06e-29 122
Msa1249310 AT1G48760.3 25.000 428 274 10 10 423 17 411 2.06e-29 122
Msa1249310 AT1G48760.1 25.000 428 274 10 10 423 17 411 2.06e-29 122

Find 97 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAATCGGTCACGAAAATT+TGG 0.165949 8_2:+43959442 None:intergenic
AGATCCAATTGAATTGAATT+TGG 0.204138 8_2:+43959413 None:intergenic
GGACTTGCTCTTTGTGCTTT+GGG 0.207114 8_2:-43957466 Msa1249310:CDS
TGAGAGGTTGCTGCAATTTC+GGG 0.218038 8_2:-43957398 Msa1249310:CDS
TGAAACTATTGAGCAAATTT+TGG 0.221383 8_2:+43952183 None:intergenic
TTGAGAGGTTGCTGCAATTT+CGG 0.235944 8_2:-43957399 Msa1249310:CDS
GCTAAGACTGTTGCGGGAAT+TGG 0.246312 8_2:-43955885 Msa1249310:CDS
CTTGGCTACCCCACACATTT+TGG 0.250975 8_2:-43957770 Msa1249310:CDS
AAGTCAGTGATCAAGATTTC+AGG 0.260313 8_2:-43952219 Msa1249310:CDS
GGATCCAAATATTCGTAAAA+AGG 0.271446 8_2:-43957377 Msa1249310:intron
GAGACATCGTGCAACGATTC+TGG 0.277385 8_2:-43952452 Msa1249310:CDS
GTTGCTTATGACAACAATTA+AGG 0.291491 8_2:+43951133 None:intergenic
TGGATACTGTTTCAAAGAAT+TGG 0.292576 8_2:+43957634 None:intergenic
TTGAACACACTCATACAAAA+TGG 0.308234 8_2:+43954416 None:intergenic
GGGACTTGCTCTTTGTGCTT+TGG 0.309614 8_2:-43957467 Msa1249310:CDS
CTCACCAAATTCAATTCAAT+TGG 0.321772 8_2:-43959417 Msa1249310:five_prime_UTR
CCTTGAACTTATTTATGTTC+TGG 0.331374 8_2:-43952293 Msa1249310:CDS
ACAGTCTTAGCAATTTGATA+TGG 0.339446 8_2:+43955897 None:intergenic
CAAATTGCTAAGACTGTTGC+GGG 0.361403 8_2:-43955891 Msa1249310:CDS
TATAATATAAATGATATATA+TGG 0.365507 8_2:-43959573 Msa1249310:five_prime_UTR
GAACATTTGTTCAGCAGAAA+TGG 0.373763 8_2:-43957443 Msa1249310:CDS
CCCAGCAACTTTGTTTGACT+CGG 0.380709 8_2:+43954443 None:intergenic
ACCGAGTCAAACAAAGTTGC+TGG 0.388455 8_2:-43954444 Msa1249310:CDS
AATCTTGATCACTGACTTCA+AGG 0.392658 8_2:+43952224 None:intergenic
ATTTCCTAAAAGATGAAGTA+TGG 0.393292 8_2:-43951160 Msa1249310:CDS
ACATTAGCTTGGACATATTC+CGG 0.402551 8_2:+43957804 None:intergenic
CTAAGACTGTTGCGGGAATT+GGG 0.408982 8_2:-43955884 Msa1249310:CDS
AGCAATTTGATATGGAGAAA+AGG 0.412858 8_2:+43955905 None:intergenic
TCACCAGAGTATGATATTGC+TGG 0.413853 8_2:-43955938 Msa1249310:CDS
GTAGAAATGCACAGAAGGTT+TGG 0.419655 8_2:-43955996 Msa1249310:intron
AGGTAACCTATTCTCTTCTC+TGG 0.420513 8_2:+43957707 None:intergenic
CCAGAACATAAATAAGTTCA+AGG 0.436916 8_2:+43952293 None:intergenic
TCTCTTCATCCATGCGTTTG+AGG 0.438936 8_2:-43959361 Msa1249310:intron
AGCAACGCTTCCAAGCTTCA+TGG 0.440064 8_2:-43951116 Msa1249310:CDS
GCAATTTGATATGGAGAAAA+GGG 0.440931 8_2:+43955906 None:intergenic
GTACATTGATCAGATGGTTA+AGG 0.443796 8_2:-43951624 Msa1249310:CDS
GGATGAAGAGAACGGATTCA+TGG 0.464867 8_2:+43959373 None:intergenic
GGATTTCCAGAGAAGAGAAT+AGG 0.466535 8_2:-43957713 Msa1249310:CDS
TCATACAAATCAGTATATAG+TGG 0.470269 8_2:-43957488 Msa1249310:CDS
ATTTCAAACGTCAACAGAAC+AGG 0.476105 8_2:-43951066 None:intergenic
AACTTCTCCCTTCAGATATG+TGG 0.477009 8_2:-43952524 Msa1249310:intron
TGCAGCAACCTCTCAACCTC+TGG 0.481063 8_2:+43957406 None:intergenic
AGGATTCTGATGCTTCAATT+CGG 0.483694 8_2:-43952324 Msa1249310:CDS
ATTCTCTTCTCTGGAAATCC+AGG 0.488886 8_2:+43957716 None:intergenic
GTGCTTGCAATCAATATCCT+TGG 0.492845 8_2:-43954357 Msa1249310:CDS
GGCTGTGAGTGCTGACACTC+AGG 0.493191 8_2:-43952482 Msa1249310:CDS
TTTCGTCAACAAGCAACATA+AGG 0.502764 8_2:+43957681 None:intergenic
ATGAAAATGACCAACACTAC+AGG 0.514474 8_2:-43957829 Msa1249310:CDS
GAATTTGGTGAGATCCGAAT+CGG 0.517253 8_2:+43959428 None:intergenic
TCTCTTAGTAAGCCAGTAGC+AGG 0.520381 8_2:+43956839 None:intergenic
GACTTGCTCTTTGTGCTTTG+GGG 0.523324 8_2:-43957465 Msa1249310:CDS
TACGGTGTATCCATGAAGCT+TGG 0.527339 8_2:+43951106 None:intergenic
TCCATTTGACCAAAATGTGT+GGG 0.528861 8_2:+43957761 None:intergenic
CTCAAGTTGATATCATCTCC+TGG 0.532466 8_2:-43957734 Msa1249310:CDS
CTAATGTTCATCCACATGCT+TGG 0.535489 8_2:-43957788 Msa1249310:CDS
TGCTTGCAAAACTGCGGCAG+AGG 0.537918 8_2:-43957900 Msa1249310:CDS
CATGTGGATGAACATTAGCT+TGG 0.545929 8_2:+43957793 None:intergenic
GGCTCGTGACCTTGCACCAG+AGG 0.547470 8_2:-43957422 Msa1249310:CDS
AGGTTTGGTGAGAACTCTAA+AGG 0.547914 8_2:-43955981 Msa1249310:CDS
CAATTTGATAGGGTATCAAT+CGG 0.552572 8_2:-43959659 None:intergenic
AGCTCTTGAACATATTAGAA+AGG 0.554006 8_2:-43956750 Msa1249310:intron
GGCACTGAACATGCTGATGA+AGG 0.554525 8_2:-43952503 Msa1249310:CDS
AGTCAGTGATCAAGATTTCA+GGG 0.555114 8_2:-43952218 Msa1249310:CDS
TATTCCGGTGCCTGTAGTGT+TGG 0.557877 8_2:+43957819 None:intergenic
ACCTCTCAACCTCTGGTGCA+AGG 0.558056 8_2:+43957413 None:intergenic
TCAAATTGCTAAGACTGTTG+CGG 0.564454 8_2:-43955892 Msa1249310:CDS
GAGAAGAGAATAGGTTACCT+TGG 0.569333 8_2:-43957704 Msa1249310:CDS
GATCTGGTACATTGATCAGA+TGG 0.569583 8_2:-43951630 Msa1249310:CDS
TTCCATTTGACCAAAATGTG+TGG 0.570770 8_2:+43957760 None:intergenic
ATGACCAACACTACAGGCAC+CGG 0.571692 8_2:-43957823 Msa1249310:CDS
GATGGTTAAGGTTCTGTCCA+AGG 0.572291 8_2:-43951612 Msa1249310:intron
TGCCTTGTATAATGCTCGTA+CGG 0.572677 8_2:+43951088 None:intergenic
GATTACTAACCTCAAACGCA+TGG 0.576240 8_2:+43959352 None:intergenic
AAGACAAGAAGTTCTAATGT+TGG 0.577873 8_2:-43957660 Msa1249310:CDS
CATAAAGAAAGTCCCAGACC+TGG 0.578337 8_2:-43956879 Msa1249310:CDS
ACCTTGCACCAGAGGTTGAG+AGG 0.580430 8_2:-43957414 Msa1249310:CDS
CATACAAATCAGTATATAGT+GGG 0.580791 8_2:-43957487 Msa1249310:CDS
CCGAGTCAAACAAAGTTGCT+GGG 0.584005 8_2:-43954443 Msa1249310:CDS
CACCGTACGAGCATTATACA+AGG 0.585438 8_2:-43951090 Msa1249310:CDS
ATGCCAGCAATATCATACTC+TGG 0.585818 8_2:+43955935 None:intergenic
CAATGTACCAGATCTTCTCA+AGG 0.590800 8_2:+43951639 None:intergenic
TATGAACGACATACTTGCCC+AGG 0.596648 8_2:-43955834 Msa1249310:intron
CAGAACATAAATAAGTTCAA+GGG 0.606658 8_2:+43952294 None:intergenic
CAACAAGCAACATAAGGCCA+AGG 0.611915 8_2:+43957687 None:intergenic
TTATTGTAGAAATGCACAGA+AGG 0.617727 8_2:-43956001 Msa1249310:intron
ATAATGAGCATTGAAGATAA+CGG 0.625734 8_2:-43954390 Msa1249310:CDS
TTACTAAGAGAGAAGCATCA+TGG 0.629530 8_2:-43956827 Msa1249310:CDS
AAACGCATGGATGAAGAGAA+CGG 0.630692 8_2:+43959365 None:intergenic
CTGTTGCGGGAATTGGGCGA+AGG 0.636293 8_2:-43955878 Msa1249310:CDS
CAAATCGGGATAACAACACC+AGG 0.636493 8_2:-43954323 Msa1249310:intron
AATGTACCAGATCTTCTCAA+GGG 0.641590 8_2:+43951640 None:intergenic
CCATTTGACCAAAATGTGTG+GGG 0.650020 8_2:+43957762 None:intergenic
CAGGAGATGATATCAACTTG+AGG 0.660137 8_2:+43957735 None:intergenic
CATACGTGCTTGCAAAACTG+CGG 0.682704 8_2:-43957906 Msa1249310:CDS
ATGAGCATTGAAGATAACGG+TGG 0.685116 8_2:-43954387 Msa1249310:CDS
GTGTGGGGTAGCCAAGCATG+TGG 0.704313 8_2:+43957777 None:intergenic
CAGTGATCAAGATTTCAGGG+AGG 0.799054 8_2:-43952215 Msa1249310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTAATAAAAATTA+GGG + chr8_2:43956995-43957014 None:intergenic 0.0%
!! GTAATAAAAATCTATAAATT+TGG + chr8_2:43953768-43953787 None:intergenic 10.0%
!!! TTTTGATGATATTATTATTT+TGG - chr8_2:43954262-43954281 Msa1249310:intron 10.0%
!!! TTTGATGATATTATTATTTT+GGG - chr8_2:43954263-43954282 Msa1249310:intron 10.0%
!! ATAAGATAATAAATAGTTAA+GGG + chr8_2:43954483-43954502 None:intergenic 10.0%
!! AATAAGATAATAAATAGTTA+AGG + chr8_2:43954484-43954503 None:intergenic 10.0%
!! TAATATCCTTAATAATTTAT+TGG + chr8_2:43954525-43954544 None:intergenic 10.0%
!!! AAAAACAAATTAACTTTTAA+AGG + chr8_2:43955576-43955595 None:intergenic 10.0%
!!! TATTTTCTTTACTAAATTTA+TGG - chr8_2:43956211-43956230 Msa1249310:intron 10.0%
!!! TTTCAAATTATTCATTTTAT+AGG + chr8_2:43957881-43957900 None:intergenic 10.0%
!!! AATTTTAATGTTTTTATTTG+TGG - chr8_2:43958140-43958159 Msa1249310:intron 10.0%
!!! ATTTTTTTTTCTGTATTAAA+AGG - chr8_2:43958704-43958723 Msa1249310:intron 10.0%
!! TTAATTTCTTAATTAATAGA+AGG + chr8_2:43959500-43959519 None:intergenic 10.0%
!! AAAAATTCCCTAAAAAAAAA+TGG - chr8_2:43951174-43951193 Msa1249310:intron 15.0%
!!! TTTGTAACCATTTTTTTTTA+GGG + chr8_2:43951184-43951203 None:intergenic 15.0%
!!! TTTTGTAACCATTTTTTTTT+AGG + chr8_2:43951185-43951204 None:intergenic 15.0%
!!! AAATTAATTAGCTTAATTCT+TGG + chr8_2:43951465-43951484 None:intergenic 15.0%
!!! CTAAAACCTTATTATTTTAT+AGG + chr8_2:43952039-43952058 None:intergenic 15.0%
!!! TATTATATGCCAAATTTTAT+TGG - chr8_2:43952137-43952156 Msa1249310:intron 15.0%
!! TTTATTCTTCCAATAAAATT+TGG + chr8_2:43952149-43952168 None:intergenic 15.0%
!! TTTAAGAATAACTAGAAATA+TGG - chr8_2:43952180-43952199 Msa1249310:intron 15.0%
!! TTAAGAATAACTAGAAATAT+GGG - chr8_2:43952181-43952200 Msa1249310:CDS 15.0%
!! AAATGGAATATAAAAAAATG+AGG + chr8_2:43953143-43953162 None:intergenic 15.0%
!!! ATTTGATGGTATTTAATTAA+TGG - chr8_2:43953634-43953653 Msa1249310:intron 15.0%
!!! TATAAATTTGGAATATTTGT+AGG + chr8_2:43953756-43953775 None:intergenic 15.0%
!! AAAATAATTATAAGAAAGGT+AGG + chr8_2:43954002-43954021 None:intergenic 15.0%
!! AGACAAAATAATTATAAGAA+AGG + chr8_2:43954006-43954025 None:intergenic 15.0%
!! TATATGTAAATTACCTTAAA+AGG + chr8_2:43954216-43954235 None:intergenic 15.0%
!! TATAGGAAGAAAAAATAAAT+GGG + chr8_2:43954457-43954476 None:intergenic 15.0%
!! TTATAGGAAGAAAAAATAAA+TGG + chr8_2:43954458-43954477 None:intergenic 15.0%
!! ATGAAAAAACATTTATACTT+TGG + chr8_2:43955611-43955630 None:intergenic 15.0%
!!! TACTGTTTTTTAATATTAAG+CGG + chr8_2:43956481-43956500 None:intergenic 15.0%
!! AATATTAAAAAACAGTATTC+TGG - chr8_2:43956484-43956503 Msa1249310:intron 15.0%
!!! ATTCTAATTTTAACATTTGA+TGG + chr8_2:43956825-43956844 None:intergenic 15.0%
!!! CAGATATATTTTGAAAATAA+AGG - chr8_2:43957233-43957252 Msa1249310:intron 15.0%
!! AAAATAAAGGAATAAAAAAG+AGG - chr8_2:43957246-43957265 Msa1249310:intron 15.0%
!!! ATTATTCATTTTATAGGTTT+GGG + chr8_2:43957875-43957894 None:intergenic 15.0%
!!! AATTATTCATTTTATAGGTT+TGG + chr8_2:43957876-43957895 None:intergenic 15.0%
!!! AATTAGTTTAATAATCATGA+AGG - chr8_2:43957936-43957955 Msa1249310:intron 15.0%
!!! AACGATTTTTCATTTATTTT+TGG - chr8_2:43958824-43958843 Msa1249310:intron 15.0%
!!! ACGATTTTTCATTTATTTTT+GGG - chr8_2:43958825-43958844 Msa1249310:intron 15.0%
!! TTAATTAATAGAAGGAAATA+TGG + chr8_2:43959492-43959511 None:intergenic 15.0%
!!! AATGAGAATGTATTTTTACA+CGG - chr8_2:43951664-43951683 Msa1249310:intron 20.0%
!! AGGATTCCTATAAAATAATA+AGG - chr8_2:43952030-43952049 Msa1249310:intron 20.0%
!!! TTTTATTGGAAGAATAAAAG+TGG - chr8_2:43952151-43952170 Msa1249310:intron 20.0%
!! TAAGAATAACTAGAAATATG+GGG - chr8_2:43952182-43952201 Msa1249310:CDS 20.0%
!!! ATGAAATATTGACTTGAAAA+TGG + chr8_2:43953109-43953128 None:intergenic 20.0%
!!! TCATAAAATAAAAGTATCCA+TGG + chr8_2:43953490-43953509 None:intergenic 20.0%
!! CATCAAATAAATTAAGAAAC+AGG + chr8_2:43953622-43953641 None:intergenic 20.0%
!!! CTGTTTCTTAATTTATTTGA+TGG - chr8_2:43953620-43953639 Msa1249310:intron 20.0%
!!! TATTTAATTAATGGACTCAA+AGG - chr8_2:43953643-43953662 Msa1249310:intron 20.0%
!! TCATAAATACTTACTACTTA+TGG + chr8_2:43954326-43954345 None:intergenic 20.0%
!!! TAAATAGTTAAGGGTATTAT+AGG + chr8_2:43954474-43954493 None:intergenic 20.0%
!!! CAGAGTATATTCTTTTTTAA+AGG - chr8_2:43954633-43954652 Msa1249310:intron 20.0%
!! ACTAATCAATTATTTATGTC+AGG - chr8_2:43955925-43955944 Msa1249310:CDS 20.0%
!! CTAATCAATTATTTATGTCA+GGG - chr8_2:43955926-43955945 Msa1249310:CDS 20.0%
!! AATTTGATTATTTCATCAAG+TGG + chr8_2:43956099-43956118 None:intergenic 20.0%
!! ATTAATAAAAATTAGGGAGA+GGG + chr8_2:43956989-43957008 None:intergenic 20.0%
!! TATTAATAAAAATTAGGGAG+AGG + chr8_2:43956990-43957009 None:intergenic 20.0%
!! TTATGAAATAGGAAAACATT+TGG - chr8_2:43957524-43957543 Msa1249310:intron 20.0%
!! TATGAAATAGGAAAACATTT+GGG - chr8_2:43957525-43957544 Msa1249310:intron 20.0%
!!! CATATTCTTTTCATGTTTTT+TGG - chr8_2:43958625-43958644 Msa1249310:intron 20.0%
!! TGAAATAAAATGTTATGCAT+GGG + chr8_2:43959332-43959351 None:intergenic 20.0%
!! TTGAAATAAAATGTTATGCA+TGG + chr8_2:43959333-43959352 None:intergenic 20.0%
! TTAATAAAAATGCTTGCAAG+TGG - chr8_2:43951206-43951225 Msa1249310:intron 25.0%
! AGATCCAATTGAATTGAATT+TGG + chr8_2:43951310-43951329 None:intergenic 25.0%
!!! TTTTCAAGTAACAATCATAC+AGG + chr8_2:43951579-43951598 None:intergenic 25.0%
!! ATTGTTACTCTAGAAAACTT+AGG - chr8_2:43951920-43951939 Msa1249310:intron 25.0%
!!! TAGAAAACTTAGGTTGTTTT+AGG - chr8_2:43951930-43951949 Msa1249310:intron 25.0%
! TTGGGAATCTTATAAAATGA+TGG - chr8_2:43951975-43951994 Msa1249310:intron 25.0%
! TGGGAATCTTATAAAATGAT+GGG - chr8_2:43951976-43951995 Msa1249310:intron 25.0%
!! TATTGTTTTCCAATTGCAAA+GGG + chr8_2:43952303-43952322 None:intergenic 25.0%
!! TTATTGTTTTCCAATTGCAA+AGG + chr8_2:43952304-43952323 None:intergenic 25.0%
! ATTGGAAAACAATAACCAAT+AGG - chr8_2:43952309-43952328 Msa1249310:CDS 25.0%
! AAATAGAAAATCAGTACAAG+AGG + chr8_2:43952450-43952469 None:intergenic 25.0%
! ATGTTATACTAGAAAGAGAA+AGG + chr8_2:43952519-43952538 None:intergenic 25.0%
! TTCTAGTATAACATGATACA+TGG - chr8_2:43952525-43952544 Msa1249310:intron 25.0%
! AAACTTTCAATTACAATCAC+AGG + chr8_2:43952620-43952639 None:intergenic 25.0%
! TCTTTGCAACGAAAAAAAAT+AGG + chr8_2:43952692-43952711 None:intergenic 25.0%
!! TCGTTAGAGTATTTGTAAAA+TGG + chr8_2:43953160-43953179 None:intergenic 25.0%
! TCATACAAATCAGTATATAG+TGG - chr8_2:43953232-43953251 Msa1249310:intron 25.0%
! CATACAAATCAGTATATAGT+GGG - chr8_2:43953233-43953252 Msa1249310:intron 25.0%
! AGTGGTAATAATCTTATGAA+AGG + chr8_2:43953392-43953411 None:intergenic 25.0%
! CATAAGATTATTACCACTTT+AGG - chr8_2:43953394-43953413 Msa1249310:intron 25.0%
!! TCATAACATTGTTTCTTTGT+TGG + chr8_2:43953694-43953713 None:intergenic 25.0%
!! AATTTGGAATATTTGTAGGT+TGG + chr8_2:43953752-43953771 None:intergenic 25.0%
!!! GACTATACTCACTTTTATAT+AGG - chr8_2:43953796-43953815 Msa1249310:intron 25.0%
! AAAGGACAACTAAAAATGAA+TGG + chr8_2:43954198-43954217 None:intergenic 25.0%
!!! CATTTTTAGTTGTCCTTTTA+AGG - chr8_2:43954200-43954219 Msa1249310:intron 25.0%
! TCAAAAGTAACAACACTTAT+TGG + chr8_2:43954248-43954267 None:intergenic 25.0%
! TAATAATTTATTGGAGAGAG+AGG + chr8_2:43954516-43954535 None:intergenic 25.0%
! CTCTCTCCAATAAATTATTA+AGG - chr8_2:43954516-43954535 Msa1249310:intron 25.0%
! ATATAAAACATATCTGCAAG+TGG - chr8_2:43954657-43954676 Msa1249310:intron 25.0%
! AGCAATTTGATATAGAGAAA+GGG + chr8_2:43954962-43954981 None:intergenic 25.0%
! TAGCAATTTGATATAGAGAA+AGG + chr8_2:43954963-43954982 None:intergenic 25.0%
! TTGAACTAGACAAAAATAGA+TGG + chr8_2:43955189-43955208 None:intergenic 25.0%
!! GAAGTATCTATGAAAACAAA+GGG + chr8_2:43955336-43955355 None:intergenic 25.0%
!!! AGAAGTATCTATGAAAACAA+AGG + chr8_2:43955337-43955356 None:intergenic 25.0%
! ATTTAAATGAAGTTGTCAGT+AGG - chr8_2:43955378-43955397 Msa1249310:intron 25.0%
! GTTGAGGAATATAAAATGAA+TGG - chr8_2:43955423-43955442 Msa1249310:intron 25.0%
!! TTGTTTCTTGTAGAAACATA+TGG - chr8_2:43955734-43955753 Msa1249310:intron 25.0%
! TACATAGAAAGTAGAAAAAC+AGG + chr8_2:43955875-43955894 None:intergenic 25.0%
! TAGTTATGCATCCATAATTT+GGG - chr8_2:43956038-43956057 Msa1249310:intron 25.0%
! TCTTTATCAAATCCTTACAA+TGG - chr8_2:43956160-43956179 Msa1249310:intron 25.0%
!!! ATAATGAGCATTGAAGATAA+CGG - chr8_2:43956330-43956349 Msa1249310:intron 25.0%
!! TTGGAAGATTTTTGTCAAAT+CGG - chr8_2:43956382-43956401 Msa1249310:intron 25.0%
! TTTATTTCCTGAAAATTACC+TGG + chr8_2:43956418-43956437 None:intergenic 25.0%
!!! TTTTCAGGAAATAAAACATC+TGG - chr8_2:43956423-43956442 Msa1249310:intron 25.0%
!!! TGTAATAGTTCTGAAACAAA+CGG + chr8_2:43956761-43956780 None:intergenic 25.0%
! TTAATAAAAATTAGGGAGAG+GGG + chr8_2:43956988-43957007 None:intergenic 25.0%
! ATTAATAAAAAAGGTGACGT+AGG - chr8_2:43957003-43957022 Msa1249310:intron 25.0%
!!! TTACCAATTTTGCTTTTCAT+AGG - chr8_2:43957209-43957228 Msa1249310:intron 25.0%
! AAGTTGTCTGATTATGAAAT+AGG - chr8_2:43957513-43957532 Msa1249310:intron 25.0%
! AACAAACAGATAACACTTAA+TGG - chr8_2:43957628-43957647 Msa1249310:intron 25.0%
! AAAGAGAAAACTGTTGTTAA+GGG + chr8_2:43957821-43957840 None:intergenic 25.0%
! TAAAGAGAAAACTGTTGTTA+AGG + chr8_2:43957822-43957841 None:intergenic 25.0%
! TATTTATAAATGACCAGAGA+AGG + chr8_2:43957913-43957932 None:intergenic 25.0%
! CTATTGTGAATGATTATCAA+AGG + chr8_2:43958006-43958025 None:intergenic 25.0%
! GTCAAATAATGAAAGAAGAA+AGG + chr8_2:43958320-43958339 None:intergenic 25.0%
! CAGAACATAAATAAGTTCAA+GGG + chr8_2:43958429-43958448 None:intergenic 25.0%
!! TGAAACTATTGAGCAAATTT+TGG + chr8_2:43958540-43958559 None:intergenic 25.0%
!!! ATTCTTTTCATGTTTTTTGG+TGG - chr8_2:43958628-43958647 Msa1249310:intron 25.0%
!!! TTCTTTTCATGTTTTTTGGT+GGG - chr8_2:43958629-43958648 Msa1249310:intron 25.0%
! TTCTGTATTAAAAGGTTTCT+TGG - chr8_2:43958712-43958731 Msa1249310:intron 25.0%
! TCTGTATTAAAAGGTTTCTT+GGG - chr8_2:43958713-43958732 Msa1249310:intron 25.0%
! ATCAATCCATCTTGTATTAA+CGG + chr8_2:43958753-43958772 None:intergenic 25.0%
! TAAATAAAATAGAAGCGATC+TGG - chr8_2:43958941-43958960 Msa1249310:intron 25.0%
!! TCTAGTTTAAACTGATAAAG+AGG + chr8_2:43958988-43959007 None:intergenic 25.0%
! TTTATCAGTTTAAACTAGAG+AGG - chr8_2:43958989-43959008 Msa1249310:intron 25.0%
! AATTAACCAAAACATATTGC+AGG + chr8_2:43959031-43959050 None:intergenic 25.0%
!!! TCATGGAAATCGATTTTAAT+GGG + chr8_2:43959285-43959304 None:intergenic 25.0%
! TACAACACTAAATTTATCCA+GGG + chr8_2:43959432-43959451 None:intergenic 25.0%
! ATACAACACTAAATTTATCC+AGG + chr8_2:43959433-43959452 None:intergenic 25.0%
!!! TTCATCTTTTAGGAAATTTC+CGG + chr8_2:43959557-43959576 None:intergenic 25.0%
! ATTTCCTAAAAGATGAAGTA+TGG - chr8_2:43959560-43959579 Msa1249310:five_prime_UTR 25.0%
CTCACCAAATTCAATTCAAT+TGG - chr8_2:43951303-43951322 Msa1249310:intron 30.0%
AGCAAATTCTCAGTAAACAA+TGG + chr8_2:43951404-43951423 None:intergenic 30.0%
TAATTCTTGGCTAATTGCAT+TGG + chr8_2:43951452-43951471 None:intergenic 30.0%
CTTGAAAATTGTTGCATATG+TGG - chr8_2:43951591-43951610 Msa1249310:intron 30.0%
CACATGTAGATACATTCATT+CGG + chr8_2:43951742-43951761 None:intergenic 30.0%
!!! ACGTTTTTAGTCTAAAGTGT+CGG - chr8_2:43951780-43951799 Msa1249310:intron 30.0%
!! AGGAGAACTTGTTAATGTTT+GGG - chr8_2:43951957-43951976 Msa1249310:intron 30.0%
ATTGGCTATGACGTATTAAA+GGG + chr8_2:43952068-43952087 None:intergenic 30.0%
CCAAATCATATTCATCTGAT+TGG + chr8_2:43952086-43952105 None:intergenic 30.0%
CCAATCAGATGAATATGATT+TGG - chr8_2:43952083-43952102 Msa1249310:intron 30.0%
! AATCTCTAAGAACTCTGTAA+AGG + chr8_2:43952340-43952359 None:intergenic 30.0%
TTTACAGAGTTCTTAGAGAT+TGG - chr8_2:43952339-43952358 Msa1249310:intron 30.0%
TTACAGAGTTCTTAGAGATT+GGG - chr8_2:43952340-43952359 Msa1249310:intron 30.0%
! CTTGATGGTATATAGAGATT+CGG - chr8_2:43952420-43952439 Msa1249310:intron 30.0%
AAGGAAAATAGAGCTTGATA+CGG + chr8_2:43952588-43952607 None:intergenic 30.0%
! AAGACAAGAAGTTCTAATGT+TGG - chr8_2:43953060-43953079 Msa1249310:intron 30.0%
TGGATACTGTTTCAAAGAAT+TGG + chr8_2:43953089-43953108 None:intergenic 30.0%
!! AGATCTCTGGGATTTAATTA+AGG + chr8_2:43953209-43953228 None:intergenic 30.0%
TTTGTATGATTGAGATCTCT+GGG + chr8_2:43953221-43953240 None:intergenic 30.0%
ATTTGTATGATTGAGATCTC+TGG + chr8_2:43953222-43953241 None:intergenic 30.0%
GGATCCAAATATTCGTAAAA+AGG - chr8_2:43953343-43953362 Msa1249310:intron 30.0%
! GTCACCTTTTTACGAATATT+TGG + chr8_2:43953350-43953369 None:intergenic 30.0%
ATGAAAGGACGCAAAATATA+AGG + chr8_2:43953377-43953396 None:intergenic 30.0%
ACATATGAACTGGATGTATT+TGG - chr8_2:43953418-43953437 Msa1249310:intron 30.0%
TTATACATCAATGAATGCTC+AGG - chr8_2:43953451-43953470 Msa1249310:intron 30.0%
!! TCAAAGGATCTTTTGTTGTA+TGG - chr8_2:43953659-43953678 Msa1249310:intron 30.0%
!! GATCTTTTGTTGTATGGATT+TGG - chr8_2:43953665-43953684 Msa1249310:intron 30.0%
! GATTTACAAAATTTTCTGCC+AGG + chr8_2:43953862-43953881 None:intergenic 30.0%
! AATTTTGTAAATCCTGCTAC+TGG - chr8_2:43953869-43953888 Msa1249310:intron 30.0%
!! ATCATGGAGTTTTAATCACT+GGG - chr8_2:43953909-43953928 Msa1249310:intron 30.0%
AGCTCTTGAACATATTAGAA+AGG - chr8_2:43953970-43953989 Msa1249310:intron 30.0%
GACAACTAAAAATGAATGGA+GGG + chr8_2:43954194-43954213 None:intergenic 30.0%
AATGTGTGTAATCAATGCAT+TGG - chr8_2:43954347-43954366 Msa1249310:CDS 30.0%
TTATTGTAGAAATGCACAGA+AGG - chr8_2:43954719-43954738 Msa1249310:intron 30.0%
GCAATTTGATATGGAGAAAA+GGG + chr8_2:43954817-43954836 None:intergenic 30.0%
AGCAATTTGATATGGAGAAA+AGG + chr8_2:43954818-43954837 None:intergenic 30.0%
ACAGTCTTAGCAATTTGATA+TGG + chr8_2:43954826-43954845 None:intergenic 30.0%
GCAATTTGATATAGAGAAAG+GGG + chr8_2:43954961-43954980 None:intergenic 30.0%
AGATGTTAAGAAACATCAGT+AGG + chr8_2:43955030-43955049 None:intergenic 30.0%
CAAAAATAGATGGTACCAAT+TGG + chr8_2:43955179-43955198 None:intergenic 30.0%
! TCTTTCTCGTATATCCTTTT+TGG - chr8_2:43955509-43955528 Msa1249310:intron 30.0%
!!! CCTTTTTTCCTATAAATTCC+CGG + chr8_2:43955686-43955705 None:intergenic 30.0%
CGGGAATTTATAGGAAAAAA+GGG - chr8_2:43955684-43955703 Msa1249310:intron 30.0%
! AAGAAAACAGAAGGTTTGTT+TGG + chr8_2:43955792-43955811 None:intergenic 30.0%
! TGTTTTCTTGAAAGTGAGAA+TGG - chr8_2:43955803-43955822 Msa1249310:intron 30.0%
! GTTTTCTTGAAAGTGAGAAT+GGG - chr8_2:43955804-43955823 Msa1249310:intron 30.0%
GTATACTACACTGATAATTG+AGG - chr8_2:43955892-43955911 Msa1249310:CDS 30.0%
ATCAATTATTTATGTCAGGG+TGG - chr8_2:43955929-43955948 Msa1249310:CDS 30.0%
TCAATTATTTATGTCAGGGT+GGG - chr8_2:43955930-43955949 Msa1249310:CDS 30.0%
ACTACAGCAGAACATTTAAT+TGG + chr8_2:43956022-43956041 None:intergenic 30.0%
GTAGTTATGCATCCATAATT+TGG - chr8_2:43956037-43956056 Msa1249310:intron 30.0%
GATTATTTCATCAAGTGGTT+TGG + chr8_2:43956094-43956113 None:intergenic 30.0%
TCAACTCATTTACCATTGTA+AGG + chr8_2:43956175-43956194 None:intergenic 30.0%
! TTTCAACTTACCTGTCTTTT+AGG - chr8_2:43956242-43956261 Msa1249310:intron 30.0%
TTGAACACACTCATACAAAA+TGG + chr8_2:43956307-43956326 None:intergenic 30.0%
GATTTGACAAAAATCTTCCA+AGG + chr8_2:43956383-43956402 None:intergenic 30.0%
! TGGAAGATTTTTGTCAAATC+GGG - chr8_2:43956383-43956402 Msa1249310:intron 30.0%
TTAATATTAAGCGGCTTCTT+TGG + chr8_2:43956472-43956491 None:intergenic 30.0%
!! GATACATCAAAGTTCTAGAA+AGG - chr8_2:43956539-43956558 Msa1249310:intron 30.0%
!! AATCTGATTTTGGTCTTTAG+AGG + chr8_2:43956624-43956643 None:intergenic 30.0%
TTGTTTCAGAACTATTACAG+CGG - chr8_2:43956762-43956781 Msa1249310:CDS 30.0%
TTATCATTTATCACCATGAC+AGG - chr8_2:43956786-43956805 Msa1249310:CDS 30.0%
AGTATCTCAGTAACTAATGA+AGG + chr8_2:43957035-43957054 None:intergenic 30.0%
TGACCTATGAAAAGCAAAAT+TGG + chr8_2:43957215-43957234 None:intergenic 30.0%
TAAAAAAGAGGAAGAGTTGT+TGG - chr8_2:43957258-43957277 Msa1249310:intron 30.0%
AAAAAAGAGGAAGAGTTGTT+GGG - chr8_2:43957259-43957278 Msa1249310:intron 30.0%
TCATAATCATGCATAAGTCA+TGG + chr8_2:43957300-43957319 None:intergenic 30.0%
GTTAATTAATCATCCGATAC+AGG - chr8_2:43957338-43957357 Msa1249310:intron 30.0%
AATTCAAACTTCAGAGTAGA+GGG + chr8_2:43957380-43957399 None:intergenic 30.0%
TAATTCAAACTTCAGAGTAG+AGG + chr8_2:43957381-43957400 None:intergenic 30.0%
! AAATATCTAACTTGTGCTTC+TGG - chr8_2:43957466-43957485 Msa1249310:CDS 30.0%
! TGTCTAAGTGCAGTTTTTAA+AGG - chr8_2:43957574-43957593 Msa1249310:intron 30.0%
! GTCTAAGTGCAGTTTTTAAA+GGG - chr8_2:43957575-43957594 Msa1249310:intron 30.0%
!!! TCACAAGGACTTCTTATTTT+GGG - chr8_2:43957849-43957868 Msa1249310:CDS 30.0%
! TATTTCTACACTTTCTCTTC+TGG - chr8_2:43957963-43957982 Msa1249310:intron 30.0%
ATTTCTACACTTTCTCTTCT+GGG - chr8_2:43957964-43957983 Msa1249310:intron 30.0%
AAAAAAGACTGATTGAGTAC+AGG + chr8_2:43958107-43958126 None:intergenic 30.0%
! AGTGACTTGAATTCTTGTTT+AGG - chr8_2:43958376-43958395 Msa1249310:intron 30.0%
CCAGAACATAAATAAGTTCA+AGG + chr8_2:43958430-43958449 None:intergenic 30.0%
CCTTGAACTTATTTATGTTC+TGG - chr8_2:43958427-43958446 Msa1249310:intron 30.0%
!! TCTACTAGCTCTTTTGTTAA+GGG + chr8_2:43958473-43958492 None:intergenic 30.0%
!! ATCTACTAGCTCTTTTGTTA+AGG + chr8_2:43958474-43958493 None:intergenic 30.0%
!! TTGAGCAAATTTTGGTAGTA+AGG + chr8_2:43958532-43958551 None:intergenic 30.0%
AATAGTTTCAAAGTGAGTCT+AGG - chr8_2:43958550-43958569 Msa1249310:intron 30.0%
!! TCTTTTCATGTTTTTTGGTG+GGG - chr8_2:43958630-43958649 Msa1249310:intron 30.0%
TATTAACGGAAAGTCATGAA+TGG + chr8_2:43958739-43958758 None:intergenic 30.0%
TATCCAGAATGCATAGATTA+CGG + chr8_2:43958885-43958904 None:intergenic 30.0%
CATTCAATTATTTGCACTTC+AGG - chr8_2:43959053-43959072 Msa1249310:intron 30.0%
TGTTTCTTAGATTCATACCT+TGG + chr8_2:43959128-43959147 None:intergenic 30.0%
!! GTCATGGAAATCGATTTTAA+TGG + chr8_2:43959286-43959305 None:intergenic 30.0%
AAAAATGTAGTAAGCTGTCA+TGG + chr8_2:43959302-43959321 None:intergenic 30.0%
GTTGCTTATGACAACAATTA+AGG + chr8_2:43959590-43959609 None:intergenic 30.0%
! AATGTGAGTTGTTACTTGAG+AGG - chr8_2:43951891-43951910 Msa1249310:intron 35.0%
! ATGTGAGTTGTTACTTGAGA+GGG - chr8_2:43951892-43951911 Msa1249310:intron 35.0%
!!! CTTAGGTTGTTTTAGGATTG+AGG - chr8_2:43951937-43951956 Msa1249310:intron 35.0%
!! GAGGAGAACTTGTTAATGTT+TGG - chr8_2:43951956-43951975 Msa1249310:intron 35.0%
! GATTGGCTATGACGTATTAA+AGG + chr8_2:43952069-43952088 None:intergenic 35.0%
AGAAATATGGGGCAACAATT+TGG - chr8_2:43952193-43952212 Msa1249310:CDS 35.0%
! TGAGTGCAGAACAAGTTTTT+AGG - chr8_2:43952247-43952266 Msa1249310:CDS 35.0%
!! AGAACAAGTTTTTAGGCCTT+GGG - chr8_2:43952254-43952273 Msa1249310:CDS 35.0%
TACAGAGTTCTTAGAGATTG+GGG - chr8_2:43952341-43952360 Msa1249310:intron 35.0%
ATCATAAGCGGAACACTATA+AGG + chr8_2:43952382-43952401 None:intergenic 35.0%
CCAATGAAACAGATCATAAG+CGG + chr8_2:43952394-43952413 None:intergenic 35.0%
CGCTTATGATCTGTTTCATT+GGG - chr8_2:43952392-43952411 Msa1249310:intron 35.0%
TTTCATTGGGTTATCCTTGA+TGG - chr8_2:43952405-43952424 Msa1249310:intron 35.0%
CGAATCTCTATATACCATCA+AGG + chr8_2:43952422-43952441 None:intergenic 35.0%
CAATCACAGGATATGTAGAA+AGG + chr8_2:43952607-43952626 None:intergenic 35.0%
! TTGTTCATATCCCCTCTTTT+AGG - chr8_2:43952777-43952796 Msa1249310:intron 35.0%
! TGTTCATATCCCCTCTTTTA+GGG - chr8_2:43952778-43952797 Msa1249310:intron 35.0%
ATGAAAATGACCAACACTAC+AGG - chr8_2:43952891-43952910 Msa1249310:intron 35.0%
! ACATTAGCTTGGACATATTC+CGG + chr8_2:43952919-43952938 None:intergenic 35.0%
TCCATTTGACCAAAATGTGT+GGG + chr8_2:43952962-43952981 None:intergenic 35.0%
TTCCATTTGACCAAAATGTG+TGG + chr8_2:43952963-43952982 None:intergenic 35.0%
TTTCGTCAACAAGCAACATA+AGG + chr8_2:43953042-43953061 None:intergenic 35.0%
ACTCTAACGAGCAATATCAA+CGG - chr8_2:43953170-43953189 Msa1249310:intron 35.0%
GAACATTTGTTCAGCAGAAA+TGG - chr8_2:43953277-43953296 Msa1249310:intron 35.0%
CAGTTCATATGTTCCTAAAG+TGG + chr8_2:43953410-43953429 None:intergenic 35.0%
! CACTTTAGGAACATATGAAC+TGG - chr8_2:43953408-43953427 Msa1249310:intron 35.0%
ACTGGATGTATTTGGATATC+TGG - chr8_2:43953426-43953445 Msa1249310:intron 35.0%
AAGTTGTTGTCATGATGTGT+AGG + chr8_2:43953526-43953545 None:intergenic 35.0%
! GCTTTTATTGTGCAAGAGAA+TGG - chr8_2:43953583-43953602 Msa1249310:intron 35.0%
!! TTACTAAGAGAGAAGCATCA+TGG - chr8_2:43953893-43953912 Msa1249310:intron 35.0%
!! CATCATGGAGTTTTAATCAC+TGG - chr8_2:43953908-43953927 Msa1249310:intron 35.0%
!! TCATGGAGTTTTAATCACTG+GGG - chr8_2:43953910-43953929 Msa1249310:intron 35.0%
! GCTTGCAATTTTCTACATCA+TGG - chr8_2:43954119-43954138 Msa1249310:intron 35.0%
GGACAACTAAAAATGAATGG+AGG + chr8_2:43954195-43954214 None:intergenic 35.0%
!! ACAACACTTATTGGCTTCAT+TGG + chr8_2:43954239-43954258 None:intergenic 35.0%
! TTATTGGAGAGAGAGGTATA+GGG + chr8_2:43954509-43954528 None:intergenic 35.0%
! TTTATTGGAGAGAGAGGTAT+AGG + chr8_2:43954510-43954529 None:intergenic 35.0%
TCAAATTGCTAAGACTGTTG+CGG - chr8_2:43954828-43954847 Msa1249310:intron 35.0%
! TTTATGATATGCACTGACCT+GGG + chr8_2:43954906-43954925 None:intergenic 35.0%
! ATTTATGATATGCACTGACC+TGG + chr8_2:43954907-43954926 None:intergenic 35.0%
!!! AAGGCTTGAGCTTTCTTTTT+TGG - chr8_2:43955236-43955255 Msa1249310:intron 35.0%
!!! AGGCTTGAGCTTTCTTTTTT+GGG - chr8_2:43955237-43955256 Msa1249310:intron 35.0%
! ATGTTGTAATGTGAGTGTTG+AGG - chr8_2:43955407-43955426 Msa1249310:intron 35.0%
CCGGGAATTTATAGGAAAAA+AGG - chr8_2:43955683-43955702 Msa1249310:intron 35.0%
CTCACTTTCAAGAAAACAGA+AGG + chr8_2:43955801-43955820 None:intergenic 35.0%
TCAATACTTGCCCAAATGTT+TGG - chr8_2:43955989-43956008 Msa1249310:CDS 35.0%
CAATACTTGCCCAAATGTTT+GGG - chr8_2:43955990-43956009 Msa1249310:CDS 35.0%
! GCAGAACATTTAATTGGTCT+AGG + chr8_2:43956016-43956035 None:intergenic 35.0%
! AACAACACCAGGTAATTTTC+AGG - chr8_2:43956408-43956427 Msa1249310:intron 35.0%
CATCAACACAACCAAAAACT+AGG - chr8_2:43956564-43956583 Msa1249310:intron 35.0%
!!! TTGTTTTTTGCCCTTTGGTA+GGG + chr8_2:43956598-43956617 None:intergenic 35.0%
!!! TTTGTTTTTTGCCCTTTGGT+AGG + chr8_2:43956599-43956618 None:intergenic 35.0%
!!! GGTTTTTGTTTTTTGCCCTT+TGG + chr8_2:43956603-43956622 None:intergenic 35.0%
! AAATATGCACTGAAGTGTCT+GGG + chr8_2:43956649-43956668 None:intergenic 35.0%
! AAAATATGCACTGAAGTGTC+TGG + chr8_2:43956650-43956669 None:intergenic 35.0%
!! TCTTTTCAGCTGTTTGAGAT+GGG + chr8_2:43956709-43956728 None:intergenic 35.0%
! TTCTTTTCAGCTGTTTGAGA+TGG + chr8_2:43956710-43956729 None:intergenic 35.0%
ACTAATATTCCATCCTGTCA+TGG + chr8_2:43956802-43956821 None:intergenic 35.0%
TCTCAGTAACTAATGAAGGA+AGG + chr8_2:43957031-43957050 None:intergenic 35.0%
TGCTGATAAATCTTGCTTAC+TGG + chr8_2:43957087-43957106 None:intergenic 35.0%
! AGCAAATTTTGTGCCTGTAT+CGG + chr8_2:43957354-43957373 None:intergenic 35.0%
! ATACAGGCACAAAATTTGCT+TGG - chr8_2:43957354-43957373 Msa1249310:intron 35.0%
ATAGGAAAACATTTGGGTGA+AGG - chr8_2:43957531-43957550 Msa1249310:intron 35.0%
! TCTCTTTAACTTCAGTCACA+AGG - chr8_2:43957834-43957853 Msa1249310:CDS 35.0%
!! GTCACAAGGACTTCTTATTT+TGG - chr8_2:43957848-43957867 Msa1249310:CDS 35.0%
! GAAATCATTTTCTCCTTCTC+TGG - chr8_2:43957897-43957916 Msa1249310:CDS 35.0%
!! ACTTTCTCTTCTGGGATATA+TGG - chr8_2:43957972-43957991 Msa1249310:intron 35.0%
TTCAAGTCACTATCTTCTCA+AGG + chr8_2:43958367-43958386 None:intergenic 35.0%
AGGATTCTGATGCTTCAATT+CGG - chr8_2:43958396-43958415 Msa1249310:intron 35.0%
! TTTTGTTAAGGGCTTCACAT+TGG + chr8_2:43958462-43958481 None:intergenic 35.0%
!! AATCTTGATCACTGACTTCA+AGG + chr8_2:43958499-43958518 None:intergenic 35.0%
AAGTCAGTGATCAAGATTTC+AGG - chr8_2:43958501-43958520 Msa1249310:intron 35.0%
AGTCAGTGATCAAGATTTCA+GGG - chr8_2:43958502-43958521 Msa1249310:intron 35.0%
!!! ATTCCTTTTTCAGTGCACAT+AGG - chr8_2:43958587-43958606 Msa1249310:intron 35.0%
!! CTTTTCATGTTTTTTGGTGG+GGG - chr8_2:43958631-43958650 Msa1249310:intron 35.0%
!! TTTTCATGTTTTTTGGTGGG+GGG - chr8_2:43958632-43958651 Msa1249310:intron 35.0%
TTAAACAGTCAACTCTAGCT+TGG + chr8_2:43958661-43958680 None:intergenic 35.0%
GACTTTCCGTTAATACAAGA+TGG - chr8_2:43958744-43958763 Msa1249310:intron 35.0%
ATCCAGAATGCATAGATTAC+GGG + chr8_2:43958884-43958903 None:intergenic 35.0%
TTTACCAGAGAGAAGAAACA+GGG + chr8_2:43958925-43958944 None:intergenic 35.0%
ATTTACCAGAGAGAAGAAAC+AGG + chr8_2:43958926-43958945 None:intergenic 35.0%
! AGTTGACCTGCAATATGTTT+TGG - chr8_2:43959022-43959041 Msa1249310:intron 35.0%
AATGTACCAGATCTTCTCAA+GGG + chr8_2:43959083-43959102 None:intergenic 35.0%
GTACATTGATCAGATGGTTA+AGG - chr8_2:43959096-43959115 Msa1249310:intron 35.0%
! ATCGAACAGGTTTTTCATCT+TGG + chr8_2:43959175-43959194 None:intergenic 35.0%
CCTATAAACTAACATCGAAC+AGG + chr8_2:43959188-43959207 None:intergenic 35.0%
! CCTGTTCGATGTTAGTTTAT+AGG - chr8_2:43959185-43959204 Msa1249310:intron 35.0%
! AAATGTTATGCATGGGCTAT+CGG + chr8_2:43959325-43959344 None:intergenic 35.0%
! CATGCCATACTTCATCTTTT+AGG + chr8_2:43959567-43959586 None:intergenic 35.0%
! CCAAATTTTCGTGACCGATT+CGG - chr8_2:43951278-43951297 Msa1249310:intron 40.0%
! GAATTTGGTGAGATCCGAAT+CGG + chr8_2:43951295-43951314 None:intergenic 40.0%
AAACGCATGGATGAAGAGAA+CGG + chr8_2:43951358-43951377 None:intergenic 40.0%
GATTACTAACCTCAAACGCA+TGG + chr8_2:43951371-43951390 None:intergenic 40.0%
! ACATGTGTAAGTGTCGTTCA+TGG - chr8_2:43951755-43951774 Msa1249310:intron 40.0%
TATAGGAATCCTGAACCTCA+TGG + chr8_2:43952022-43952041 None:intergenic 40.0%
!! GAATATGATTTGGTTGCCAC+TGG - chr8_2:43952093-43952112 Msa1249310:intron 40.0%
!! CAGAACAAGTTTTTAGGCCT+TGG - chr8_2:43952253-43952272 Msa1249310:CDS 40.0%
! TCTGTAAAGGCATAGCCTAT+TGG + chr8_2:43952327-43952346 None:intergenic 40.0%
CCGCTTATGATCTGTTTCAT+TGG - chr8_2:43952391-43952410 Msa1249310:intron 40.0%
GGAGAAGAGAATCTCATTCT+CGG + chr8_2:43952480-43952499 None:intergenic 40.0%
AGAGAAAGGTTATCCCAGAA+GGG + chr8_2:43952505-43952524 None:intergenic 40.0%
AAGAGAAAGGTTATCCCAGA+AGG + chr8_2:43952506-43952525 None:intergenic 40.0%
AAGAGGGGATATGAACAAGA+TGG + chr8_2:43952775-43952794 None:intergenic 40.0%
GAATCATGTCCCTAAAAGAG+GGG + chr8_2:43952790-43952809 None:intergenic 40.0%
CGAATCATGTCCCTAAAAGA+GGG + chr8_2:43952791-43952810 None:intergenic 40.0%
!! CCTCTTTTAGGGACATGATT+CGG - chr8_2:43952789-43952808 Msa1249310:intron 40.0%
!! CTCTTTTAGGGACATGATTC+GGG - chr8_2:43952790-43952809 Msa1249310:intron 40.0%
CATGTGGATGAACATTAGCT+TGG + chr8_2:43952930-43952949 None:intergenic 40.0%
CTAATGTTCATCCACATGCT+TGG - chr8_2:43952932-43952951 Msa1249310:intron 40.0%
CCATTTGACCAAAATGTGTG+GGG + chr8_2:43952961-43952980 None:intergenic 40.0%
CAGGAGATGATATCAACTTG+AGG + chr8_2:43952988-43953007 None:intergenic 40.0%
!! CTCAAGTTGATATCATCTCC+TGG - chr8_2:43952986-43953005 Msa1249310:intron 40.0%
! ATTCTCTTCTCTGGAAATCC+AGG + chr8_2:43953007-43953026 None:intergenic 40.0%
GGATTTCCAGAGAAGAGAAT+AGG - chr8_2:43953007-43953026 Msa1249310:intron 40.0%
AGGTAACCTATTCTCTTCTC+TGG + chr8_2:43953016-43953035 None:intergenic 40.0%
GAGAAGAGAATAGGTTACCT+TGG - chr8_2:43953016-43953035 Msa1249310:intron 40.0%
TAACGAGCAATATCAACGGT+GGG - chr8_2:43953174-43953193 Msa1249310:intron 40.0%
TTGAGAGGTTGCTGCAATTT+CGG - chr8_2:43953321-43953340 Msa1249310:intron 40.0%
! CAAAATTTTCTGCCAGGTCT+GGG + chr8_2:43953856-43953875 None:intergenic 40.0%
! ACAAAATTTTCTGCCAGGTC+TGG + chr8_2:43953857-43953876 None:intergenic 40.0%
TGCTTGCAAAGACTAACAAG+TGG + chr8_2:43954147-43954166 None:intergenic 40.0%
AGCTACTGAAGCGAGTAAAA+CGG - chr8_2:43954608-43954627 Msa1249310:intron 40.0%
! TCTGCAAGTGGATTTGATTG+TGG - chr8_2:43954669-43954688 Msa1249310:intron 40.0%
GTAGAAATGCACAGAAGGTT+TGG - chr8_2:43954724-43954743 Msa1249310:intron 40.0%
!! AGGTTTGGTGAGAACTCTAA+AGG - chr8_2:43954739-43954758 Msa1249310:intron 40.0%
TCACCAGAGTATGATATTGC+TGG - chr8_2:43954782-43954801 Msa1249310:intron 40.0%
ATGCCAGCAATATCATACTC+TGG + chr8_2:43954788-43954807 None:intergenic 40.0%
CAAATTGCTAAGACTGTTGC+GGG - chr8_2:43954829-43954848 Msa1249310:intron 40.0%
CTAAGACTGTTGTGTGCATT+GGG - chr8_2:43954980-43954999 Msa1249310:intron 40.0%
!!! GGCTTGAGCTTTCTTTTTTG+GGG - chr8_2:43955238-43955257 Msa1249310:intron 40.0%
!!! GCTTGAGCTTTCTTTTTTGG+GGG - chr8_2:43955239-43955258 Msa1249310:intron 40.0%
TAATGACAGTGCAGCCAAAA+AGG + chr8_2:43955526-43955545 None:intergenic 40.0%
GAAAGAAATGATGCCTCTAC+CGG - chr8_2:43955664-43955683 Msa1249310:intron 40.0%
AAAGAAATGATGCCTCTACC+GGG - chr8_2:43955665-43955684 Msa1249310:intron 40.0%
TTCCTATAAATTCCCGGTAG+AGG + chr8_2:43955680-43955699 None:intergenic 40.0%
! CAACTTACCTGTCTTTTAGG+TGG - chr8_2:43956245-43956264 Msa1249310:intron 40.0%
TTTGTAGCCACCTAAAAGAC+AGG + chr8_2:43956255-43956274 None:intergenic 40.0%
!! ATGAGCATTGAAGATAACGG+TGG - chr8_2:43956333-43956352 Msa1249310:intron 40.0%
GTGCTTGCAATCAATATCCT+TGG - chr8_2:43956363-43956382 Msa1249310:intron 40.0%
!! GGGCTTGTTTTCCTAGTTTT+TGG + chr8_2:43956578-43956597 None:intergenic 40.0%
!! TGTCTGGGGTAATCTGATTT+TGG + chr8_2:43956634-43956653 None:intergenic 40.0%
! AATATGCACTGAAGTGTCTG+GGG + chr8_2:43956648-43956667 None:intergenic 40.0%
CATTTATCACCATGACAGGA+TGG - chr8_2:43956790-43956809 Msa1249310:CDS 40.0%
AGTCTTCACTTTAAGCCTTG+AGG - chr8_2:43956855-43956874 Msa1249310:CDS 40.0%
CTAGCTCAGTGATAAGAGTT+TGG - chr8_2:43956880-43956899 Msa1249310:CDS 40.0%
TACAATATAACCGTCCCTGA+GGG + chr8_2:43956937-43956956 None:intergenic 40.0%
! AGTCTCCTATGGATTGTCTT+GGG + chr8_2:43957154-43957173 None:intergenic 40.0%
ATCAACTGTTCAGTCTCCTA+TGG + chr8_2:43957165-43957184 None:intergenic 40.0%
GCATGATTATGACAAATCGC+AGG - chr8_2:43957308-43957327 Msa1249310:intron 40.0%
ATGACAAATCGCAGGTCTTA+AGG - chr8_2:43957316-43957335 Msa1249310:intron 40.0%
GTTCTCCCTAGTGTCAATTT+GGG + chr8_2:43957706-43957725 None:intergenic 40.0%
ACATATCTGAAGGGAGAAGT+TGG + chr8_2:43958197-43958216 None:intergenic 40.0%
AACTTCTCCCTTCAGATATG+TGG - chr8_2:43958196-43958215 Msa1249310:intron 40.0%
TTCAGTGCCACATATCTGAA+GGG + chr8_2:43958206-43958225 None:intergenic 40.0%
TGTCCTATGTGCACTGAAAA+AGG + chr8_2:43958593-43958612 None:intergenic 40.0%
ATCCCGTAATCTATGCATTC+TGG - chr8_2:43958879-43958898 Msa1249310:intron 40.0%
GGAACATGCTCATGCAAAAT+GGG + chr8_2:43958967-43958986 None:intergenic 40.0%
AGGAACATGCTCATGCAAAA+TGG + chr8_2:43958968-43958987 None:intergenic 40.0%
CAATGTACCAGATCTTCTCA+AGG + chr8_2:43959084-43959103 None:intergenic 40.0%
GATCTGGTACATTGATCAGA+TGG - chr8_2:43959090-43959109 Msa1249310:intron 40.0%
! TTGTTTCTCATCTCTACACC+TGG - chr8_2:43959249-43959268 Msa1249310:intron 40.0%
GCAGCTTGGTACTTATTACA+GGG + chr8_2:43959377-43959396 None:intergenic 40.0%
TGCAGCTTGGTACTTATTAC+AGG + chr8_2:43959378-43959397 None:intergenic 40.0%
GATCTCTATGCTATGCTAGT+AGG - chr8_2:43959531-43959550 Msa1249310:five_prime_UTR 40.0%
TGCCTTGTATAATGCTCGTA+CGG + chr8_2:43959635-43959654 None:intergenic 40.0%
CCGAATCGGTCACGAAAATT+TGG + chr8_2:43951281-43951300 None:intergenic 45.0%
! GGATGAAGAGAACGGATTCA+TGG + chr8_2:43951350-43951369 None:intergenic 45.0%
TCTCTTCATCCATGCGTTTG+AGG - chr8_2:43951359-43951378 Msa1249310:intron 45.0%
! CAATGTCTAAGTGTCGTGTC+TGG + chr8_2:43951693-43951712 None:intergenic 45.0%
CAGACACGACACTTAGACAT+TGG - chr8_2:43951691-43951710 Msa1249310:intron 45.0%
ATCCATAAGCGTACTTGTGG+AGG + chr8_2:43951823-43951842 None:intergenic 45.0%
GTGATCCATAAGCGTACTTG+TGG + chr8_2:43951826-43951845 None:intergenic 45.0%
AAAGTGAAGCAGTGACCATG+AGG - chr8_2:43952004-43952023 Msa1249310:intron 45.0%
AACAGTGAGTGATTGACCAG+TGG + chr8_2:43952112-43952131 None:intergenic 45.0%
! ATGGGGCAACAATTTGGAGT+CGG - chr8_2:43952199-43952218 Msa1249310:CDS 45.0%
! TTGGAGTCGGTTTCTCTTAC+CGG - chr8_2:43952212-43952231 Msa1249310:CDS 45.0%
!! TTTCTCTTACCGGCTTTGCA+AGG - chr8_2:43952222-43952241 Msa1249310:CDS 45.0%
TTTCCAATTGCAAAGGGCCA+AGG + chr8_2:43952297-43952316 None:intergenic 45.0%
ATTCTCTTCTCCAACCCTTC+TGG - chr8_2:43952488-43952507 Msa1249310:CDS 45.0%
TTCTCTTCTCCAACCCTTCT+GGG - chr8_2:43952489-43952508 Msa1249310:CDS 45.0%
AAAGGTTATCCCAGAAGGGT+TGG + chr8_2:43952501-43952520 None:intergenic 45.0%
GCTTGATACGGTGACAGTAT+TGG + chr8_2:43952576-43952595 None:intergenic 45.0%
CCGAATCATGTCCCTAAAAG+AGG + chr8_2:43952792-43952811 None:intergenic 45.0%
CATACGTGCTTGCAAAACTG+CGG - chr8_2:43952814-43952833 Msa1249310:intron 45.0%
!! CCCCACACATTTTGGTCAAA+TGG - chr8_2:43952958-43952977 Msa1249310:intron 45.0%
CAACAAGCAACATAAGGCCA+AGG + chr8_2:43953036-43953055 None:intergenic 45.0%
CTAACGAGCAATATCAACGG+TGG - chr8_2:43953173-43953192 Msa1249310:intron 45.0%
!! GCAATATCAACGGTGGGTTA+TGG - chr8_2:43953180-43953199 Msa1249310:intron 45.0%
! GGACTTGCTCTTTGTGCTTT+GGG - chr8_2:43953254-43953273 Msa1249310:intron 45.0%
! GACTTGCTCTTTGTGCTTTG+GGG - chr8_2:43953255-43953274 Msa1249310:intron 45.0%
TGAGAGGTTGCTGCAATTTC+GGG - chr8_2:43953322-43953341 Msa1249310:intron 45.0%
CATCAATGAATGCTCAGGAG+AGG - chr8_2:43953456-43953475 Msa1249310:intron 45.0%
AATGCTCAGGAGAGGAAAAC+AGG - chr8_2:43953464-43953483 Msa1249310:intron 45.0%
CATAAAGAAAGTCCCAGACC+TGG - chr8_2:43953841-43953860 Msa1249310:intron 45.0%
TCTCTTAGTAAGCCAGTAGC+AGG + chr8_2:43953884-43953903 None:intergenic 45.0%
AAATGTTAACGAGTGCCCCT+GGG - chr8_2:43954286-43954305 Msa1249310:intron 45.0%
!! AGAATGCTTAAAGAGTGCCC+CGG - chr8_2:43954413-43954432 Msa1249310:CDS 45.0%
CTAAGACTGTTGCGGGAATT+GGG - chr8_2:43954836-43954855 Msa1249310:intron 45.0%
TATGAACGACATACTTGCCC+AGG - chr8_2:43954886-43954905 Msa1249310:intron 45.0%
GCTAAGACTGTTGTGTGCAT+TGG - chr8_2:43954979-43954998 Msa1249310:intron 45.0%
TGGGCATTTGAGCAAAGACT+CGG + chr8_2:43955152-43955171 None:intergenic 45.0%
TCAAATGCCCAGCAACCAAT+TGG - chr8_2:43955161-43955180 Msa1249310:intron 45.0%
GATGGTACCAATTGGTTGCT+GGG + chr8_2:43955171-43955190 None:intergenic 45.0%
AGATGGTACCAATTGGTTGC+TGG + chr8_2:43955172-43955191 None:intergenic 45.0%
CAGTTGACCTGTGAAAACAG+AGG - chr8_2:43955213-43955232 Msa1249310:intron 45.0%
TGACCTGTGAAAACAGAGGA+AGG - chr8_2:43955217-43955236 Msa1249310:intron 45.0%
! AAGCCTTCCTCTGTTTTCAC+AGG + chr8_2:43955223-43955242 None:intergenic 45.0%
!!! TGAGCTTTCTTTTTTGGGGG+TGG - chr8_2:43955242-43955261 Msa1249310:intron 45.0%
!!! GAGCTTTCTTTTTTGGGGGT+GGG - chr8_2:43955243-43955262 Msa1249310:intron 45.0%
!!! AGCTTTCTTTTTTGGGGGTG+GGG - chr8_2:43955244-43955263 Msa1249310:intron 45.0%
TGCCTCTACCGGGAATTTAT+AGG - chr8_2:43955675-43955694 Msa1249310:intron 45.0%
CAGAAGGGGGAAGGAATATA+TGG - chr8_2:43955954-43955973 Msa1249310:CDS 45.0%
TGGTCTAGGCCCAAACATTT+GGG + chr8_2:43956002-43956021 None:intergenic 45.0%
TTGGTCTAGGCCCAAACATT+TGG + chr8_2:43956003-43956022 None:intergenic 45.0%
ACCGAGTCAAACAAAGTTGC+TGG - chr8_2:43956276-43956295 Msa1249310:intron 45.0%
! CCCAGCAACTTTGTTTGACT+CGG + chr8_2:43956280-43956299 None:intergenic 45.0%
CCGAGTCAAACAAAGTTGCT+GGG - chr8_2:43956277-43956296 Msa1249310:intron 45.0%
CAAATCGGGATAACAACACC+AGG - chr8_2:43956397-43956416 Msa1249310:intron 45.0%
AGGAAAACAAGCCCTACCAA+AGG - chr8_2:43956584-43956603 Msa1249310:intron 45.0%
GGAAAACAAGCCCTACCAAA+GGG - chr8_2:43956585-43956604 Msa1249310:intron 45.0%
ATCACTGAGCTAGAACCTCA+AGG + chr8_2:43956873-43956892 None:intergenic 45.0%
ATGCAGTACAAATCCCCTCA+GGG - chr8_2:43956920-43956939 Msa1249310:intron 45.0%
ACAATATAACCGTCCCTGAG+GGG + chr8_2:43956936-43956955 None:intergenic 45.0%
CTACAATATAACCGTCCCTG+AGG + chr8_2:43956938-43956957 None:intergenic 45.0%
AGCTTCCCAAGACAATCCAT+AGG - chr8_2:43957146-43957165 Msa1249310:intron 45.0%
! CAGTCTCCTATGGATTGTCT+TGG + chr8_2:43957155-43957174 None:intergenic 45.0%
GAAAACATTTGGGTGAAGGC+AGG - chr8_2:43957535-43957554 Msa1249310:intron 45.0%
AGTCCACCCAAATTGACACT+AGG - chr8_2:43957697-43957716 Msa1249310:CDS 45.0%
GTCCACCCAAATTGACACTA+GGG - chr8_2:43957698-43957717 Msa1249310:CDS 45.0%
GGTTCTCCCTAGTGTCAATT+TGG + chr8_2:43957707-43957726 None:intergenic 45.0%
GCTTCTACATCAACCCACTT+GGG + chr8_2:43957790-43957809 None:intergenic 45.0%
AGCTTCTACATCAACCCACT+TGG + chr8_2:43957791-43957810 None:intergenic 45.0%
GTTCAGTGCCACATATCTGA+AGG + chr8_2:43958207-43958226 None:intergenic 45.0%
CAGTGATCAAGATTTCAGGG+AGG - chr8_2:43958505-43958524 Msa1249310:intron 45.0%
! TTCACCCTGTTTCTTCTCTC+TGG - chr8_2:43958918-43958937 Msa1249310:intron 45.0%
! GGTTTTCCCTTGAGAAGATC+TGG - chr8_2:43959074-43959093 Msa1249310:intron 45.0%
GATGGTTAAGGTTCTGTCCA+AGG - chr8_2:43959108-43959127 Msa1249310:intron 45.0%
TTAATGGGATGTAGCATGCC+AGG + chr8_2:43959270-43959289 None:intergenic 45.0%
ATAGAAGCTGCAATGCAGCT+TGG + chr8_2:43959391-43959410 None:intergenic 45.0%
GCATTGCAGCTTCTATGTTG+TGG - chr8_2:43959395-43959414 Msa1249310:five_prime_UTR 45.0%
TTGTGGTCACAAATCATCCC+TGG - chr8_2:43959412-43959431 Msa1249310:five_prime_UTR 45.0%
TCTATGCTATGCTAGTAGGC+CGG - chr8_2:43959535-43959554 Msa1249310:five_prime_UTR 45.0%
TACGGTGTATCCATGAAGCT+TGG + chr8_2:43959617-43959636 None:intergenic 45.0%
CACCGTACGAGCATTATACA+AGG - chr8_2:43959630-43959649 Msa1249310:five_prime_UTR 45.0%
!! TATAATATAAATGATATATA+TGG - chr8_2:43951147-43951166 Msa1249310:CDS 5.0%
!! TATAATAATAATAACAATAA+TGG + chr8_2:43951500-43951519 None:intergenic 5.0%
!!! TTATATTTTTTAATTTCATT+TGG - chr8_2:43955469-43955488 Msa1249310:intron 5.0%
!!! CTTTTTTATTAATAAAAATT+AGG + chr8_2:43956996-43957015 None:intergenic 5.0%
!!! CTAATTTTTATTAATAAAAA+AGG - chr8_2:43956994-43957013 Msa1249310:intron 5.0%
TGCCTCCACAAGTACGCTTA+TGG - chr8_2:43951818-43951837 Msa1249310:intron 50.0%
AAGCAGTGACCATGAGGTTC+AGG - chr8_2:43952010-43952029 Msa1249310:intron 50.0%
GCACTCAAACCTTGCAAAGC+CGG + chr8_2:43952234-43952253 None:intergenic 50.0%
TTGTGCCAATGTGCTGTCCT+TGG - chr8_2:43952277-43952296 Msa1249310:CDS 50.0%
TGTCCTTGGCCCTTTGCAAT+TGG - chr8_2:43952291-43952310 Msa1249310:CDS 50.0%
! CGCAGTTTTGCAAGCACGTA+TGG + chr8_2:43952816-43952835 None:intergenic 50.0%
ATGACCAACACTACAGGCAC+CGG - chr8_2:43952897-43952916 Msa1249310:intron 50.0%
TATTCCGGTGCCTGTAGTGT+TGG + chr8_2:43952904-43952923 None:intergenic 50.0%
! CTTGGCTACCCCACACATTT+TGG - chr8_2:43952950-43952969 Msa1249310:intron 50.0%
! GGGACTTGCTCTTTGTGCTT+TGG - chr8_2:43953253-43953272 Msa1249310:intron 50.0%
GAAATGTTAACGAGTGCCCC+TGG - chr8_2:43954285-43954304 Msa1249310:intron 50.0%
AATGTTAACGAGTGCCCCTG+GGG - chr8_2:43954287-43954306 Msa1249310:intron 50.0%
!! GTCCTTAAAAAGTGCCCCAG+GGG + chr8_2:43954304-43954323 None:intergenic 50.0%
!! GGTCCTTAAAAAGTGCCCCA+GGG + chr8_2:43954305-43954324 None:intergenic 50.0%
!! TGGTCCTTAAAAAGTGCCCC+AGG + chr8_2:43954306-43954325 None:intergenic 50.0%
!! GAATGCTTAAAGAGTGCCCC+GGG - chr8_2:43954414-43954433 Msa1249310:CDS 50.0%
!! AATGCTTAAAGAGTGCCCCG+GGG - chr8_2:43954415-43954434 Msa1249310:CDS 50.0%
GCTAAGACTGTTGCGGGAAT+TGG - chr8_2:43954835-43954854 Msa1249310:intron 50.0%
!!! CTTTTTTGGGGGTGGGGAAT+TGG - chr8_2:43955250-43955269 Msa1249310:intron 50.0%
TTATGTCAGGGTGGGTCAGA+AGG - chr8_2:43955938-43955957 Msa1249310:CDS 50.0%
TATGTCAGGGTGGGTCAGAA+GGG - chr8_2:43955939-43955958 Msa1249310:CDS 50.0%
GGAAGGAATATATGGCCTCC+TGG - chr8_2:43955962-43955981 Msa1249310:CDS 50.0%
!! GCAAGTATTGACTCTCCAGG+AGG + chr8_2:43955980-43955999 None:intergenic 50.0%
!! TGGGCAAGTATTGACTCTCC+AGG + chr8_2:43955983-43956002 None:intergenic 50.0%
AAGAGCCTTCAGACGTGCTA+GGG - chr8_2:43956672-43956691 Msa1249310:intron 50.0%
ACTTTCCCTAGCACGTCTGA+AGG + chr8_2:43956680-43956699 None:intergenic 50.0%
!! AGTTTGGCCTTGTAACCTCC+AGG - chr8_2:43956896-43956915 Msa1249310:CDS 50.0%
!! GTTTGGCCTTGTAACCTCCA+GGG - chr8_2:43956897-43956916 Msa1249310:CDS 50.0%
GATTTGTACTGCATCCCTGG+AGG + chr8_2:43956914-43956933 None:intergenic 50.0%
GATGCAGTACAAATCCCCTC+AGG - chr8_2:43956919-43956938 Msa1249310:intron 50.0%
AGTACAAATCCCCTCAGGGA+CGG - chr8_2:43956924-43956943 Msa1249310:intron 50.0%
TTTGGGTGAAGGCAGGACTA+AGG - chr8_2:43957542-43957561 Msa1249310:intron 50.0%
CTCCCTAGTGTCAATTTGGG+TGG + chr8_2:43957703-43957722 None:intergenic 50.0%
CTACATCAACCCACTTGGGT+TGG + chr8_2:43957786-43957805 None:intergenic 50.0%
GACTGATTGAGTACAGGTCG+TGG + chr8_2:43958101-43958120 None:intergenic 50.0%
! GGCACTGAACATGCTGATGA+AGG - chr8_2:43958217-43958236 Msa1249310:intron 50.0%
GAGACATCGTGCAACGATTC+TGG - chr8_2:43958268-43958287 Msa1249310:intron 50.0%
AGCAACGCTTCCAAGCTTCA+TGG - chr8_2:43959604-43959623 Msa1249310:five_prime_UTR 50.0%
CAGCACATTGGCACAACCCA+AGG + chr8_2:43952273-43952292 None:intergenic 55.0%
AAGGGCCAAGGACAGCACAT+TGG + chr8_2:43952285-43952304 None:intergenic 55.0%
TGCTTGCAAAACTGCGGCAG+AGG - chr8_2:43952820-43952839 Msa1249310:intron 55.0%
ACCTTGCACCAGAGGTTGAG+AGG - chr8_2:43953306-43953325 Msa1249310:intron 55.0%
ACCTCTCAACCTCTGGTGCA+AGG + chr8_2:43953310-43953329 None:intergenic 55.0%
TGCAGCAACCTCTCAACCTC+TGG + chr8_2:43953317-43953336 None:intergenic 55.0%
CAGGAGAGGAAAACAGGCCA+TGG - chr8_2:43953470-43953489 Msa1249310:intron 55.0%
!! TGCCCCTGGGGCACTTTTTA+AGG - chr8_2:43954299-43954318 Msa1249310:intron 55.0%
!! ATGCTTAAAGAGTGCCCCGG+GGG - chr8_2:43954416-43954435 Msa1249310:CDS 55.0%
TCATGTTAACGAGTGCCCCC+GGG + chr8_2:43954434-43954453 None:intergenic 55.0%
GTCATGTTAACGAGTGCCCC+CGG + chr8_2:43954435-43954454 None:intergenic 55.0%
CTGTTGTGTGCATTGGGCGA+AGG - chr8_2:43954986-43955005 Msa1249310:intron 55.0%
ATGTCAGGGTGGGTCAGAAG+GGG - chr8_2:43955940-43955959 Msa1249310:CDS 55.0%
CAAGAGCCTTCAGACGTGCT+AGG - chr8_2:43956671-43956690 Msa1249310:intron 55.0%
CTGCATCCCTGGAGGTTACA+AGG + chr8_2:43956906-43956925 None:intergenic 55.0%
GGGGATTTGTACTGCATCCC+TGG + chr8_2:43956917-43956936 None:intergenic 55.0%
! TTCTGGCTGCTTGCAAGCAG+AGG - chr8_2:43957483-43957502 Msa1249310:CDS 55.0%
GAACCGAACCAGAGACCTTG+AGG - chr8_2:43957722-43957741 Msa1249310:CDS 55.0%
CCTCCTCAAGGTCTCTGGTT+CGG + chr8_2:43957728-43957747 None:intergenic 55.0%
TTGGAGTGTGCTCCTCCTCA+AGG + chr8_2:43957740-43957759 None:intergenic 55.0%
! TTGAGGAGGAGCACACTCCA+AGG - chr8_2:43957739-43957758 Msa1249310:CDS 55.0%
GTGTGGGGTAGCCAAGCATG+TGG + chr8_2:43952946-43952965 None:intergenic 60.0%
CATGTTAACGAGTGCCCCCG+GGG + chr8_2:43954433-43954452 None:intergenic 60.0%
CTGTTGCGGGAATTGGGCGA+AGG - chr8_2:43954842-43954861 Msa1249310:intron 60.0%
TGTCAGGGTGGGTCAGAAGG+GGG - chr8_2:43955941-43955960 Msa1249310:CDS 60.0%
CCGAACCAGAGACCTTGAGG+AGG - chr8_2:43957725-43957744 Msa1249310:CDS 60.0%
GTGCTCCTCCTCAAGGTCTC+TGG + chr8_2:43957733-43957752 None:intergenic 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr8_2:43957759-43957778 None:intergenic 60.0%
AGGTCCCAAGCCAACACCAC+CGG - chr8_2:43957759-43957778 Msa1249310:CDS 60.0%
!! TCAACCCACTTGGGTTGGCC+CGG + chr8_2:43957781-43957800 None:intergenic 60.0%
GGTCGTGGCAAGCACGAGAT+AGG + chr8_2:43958086-43958105 None:intergenic 60.0%
!! GGCTGTGAGTGCTGACACTC+AGG - chr8_2:43958238-43958257 Msa1249310:intron 60.0%
GGCTCGTGACCTTGCACCAG+AGG - chr8_2:43953298-43953317 Msa1249310:intron 65.0%
AGGGTGGGTCAGAAGGGGGA+AGG - chr8_2:43955945-43955964 Msa1249310:CDS 65.0%
GGTCCCAAGCCAACACCACC+GGG - chr8_2:43957760-43957779 Msa1249310:CDS 65.0%
!! TGGCCCGGTGGTGTTGGCTT+GGG + chr8_2:43957766-43957785 None:intergenic 65.0%
!! TTGGCCCGGTGGTGTTGGCT+TGG + chr8_2:43957767-43957786 None:intergenic 65.0%
!! TTGGGTTGGCCCGGTGGTGT+TGG + chr8_2:43957772-43957791 None:intergenic 65.0%
ACCACCGGGCCAACCCAAGT+GGG - chr8_2:43957774-43957793 Msa1249310:CDS 65.0%
CACCACCGGGCCAACCCAAG+TGG - chr8_2:43957773-43957792 Msa1249310:CDS 70.0%
!! ACCCACTTGGGTTGGCCCGG+TGG + chr8_2:43957778-43957797 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 43951067 43959675 43951067 ID=Msa1249310;Name=Msa1249310
chr8_2 mRNA 43951067 43959675 43951067 ID=Msa1249310-mRNA-1;Parent=Msa1249310;Name=Msa1249310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=282|1|0.9|1|0.88|0.9|10|0|473
chr8_2 exon 43951067 43951189 43951067 ID=Msa1249310-mRNA-1:exon:13369;Parent=Msa1249310-mRNA-1
chr8_2 exon 43951613 43951667 43951613 ID=Msa1249310-mRNA-1:exon:13368;Parent=Msa1249310-mRNA-1
chr8_2 exon 43952181 43952344 43952181 ID=Msa1249310-mRNA-1:exon:13367;Parent=Msa1249310-mRNA-1
chr8_2 exon 43952441 43952531 43952441 ID=Msa1249310-mRNA-1:exon:13366;Parent=Msa1249310-mRNA-1
chr8_2 exon 43954324 43954478 43954324 ID=Msa1249310-mRNA-1:exon:13365;Parent=Msa1249310-mRNA-1
chr8_2 exon 43955835 43956014 43955835 ID=Msa1249310-mRNA-1:exon:13364;Parent=Msa1249310-mRNA-1
chr8_2 exon 43956751 43956924 43956751 ID=Msa1249310-mRNA-1:exon:13363;Parent=Msa1249310-mRNA-1
chr8_2 exon 43957378 43957519 43957378 ID=Msa1249310-mRNA-1:exon:13362;Parent=Msa1249310-mRNA-1
chr8_2 exon 43957641 43957943 43957641 ID=Msa1249310-mRNA-1:exon:13361;Parent=Msa1249310-mRNA-1
chr8_2 exon 43959362 43959675 43959362 ID=Msa1249310-mRNA-1:exon:13360;Parent=Msa1249310-mRNA-1
chr8_2 five_prime_UTR 43959394 43959675 43959394 ID=Msa1249310-mRNA-1:five_prime_utr;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43959362 43959393 43959362 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43957641 43957943 43957641 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43957378 43957519 43957378 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43956751 43956924 43956751 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43955835 43956014 43955835 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43954324 43954478 43954324 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43952441 43952531 43952441 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43952181 43952344 43952181 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43951613 43951667 43951613 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
chr8_2 CDS 43951067 43951189 43951067 ID=Msa1249310-mRNA-1:cds;Parent=Msa1249310-mRNA-1
Gene Sequence

>Msa1249310

ATGAATCCGTTCTCTTCATCCATGCGTTTGAGGGACATGATTCGGGCCATACGTGCTTGCAAAACTGCGGCAGAGGAACGTACTGTTGTAAGAAAAGAATGTGCTGCGATTCGTGCTTCAATTGATGAAAATGACCAACACTACAGGCACCGGAATATGTCCAAGCTAATGTTCATCCACATGCTTGGCTACCCCACACATTTTGGTCAAATGGAATGCCTCAAGTTGATATCATCTCCTGGATTTCCAGAGAAGAGAATAGGTTACCTTGGCCTTATGTTGCTTGTTGACGAAAGACAAGAAGTTCTAATGTTGGTCACCAATTCTTTGAAACAAGATCTCAATCATACAAATCAGTATATAGTGGGACTTGCTCTTTGTGCTTTGGGGAACATTTGTTCAGCAGAAATGGCTCGTGACCTTGCACCAGAGGTTGAGAGGTTGCTGCAATTTCGGGATCCAAATATTCGTAAAAAGGCAGCTTTATGCTCTATAAGAATCATAAAGAAAGTCCCAGACCTGGCAGAAAATTTTGTAAATCCTGCTACTGGCTTACTAAGAGAGAAGCATCATGGAGTTTTAATCACTGGGGTTCAGCTTTGTACAGAGCTGTGTAAAATTAGCTCAGAAGCTCTTGAACATATTAGAAAGAAATGCACAGAAGGTTTGGTGAGAACTCTAAAGGATCTAGCAAACAGTTCTTATTCACCAGAGTATGATATTGCTGGCATTACAGACCCTTTTCTCCATATCAAATTGCTAAGACTGTTGCGGGAATTGGGCGAAGGTGATGCAGATGCTAGCGACTCTATGAACGACATACTTGCCCAGGTGGCTACAAAGACCGAGTCAAACAAAGTTGCTGGGAATGCCATTTTGTATGAGTGTGTTCAAACAATAATGAGCATTGAAGATAACGGTGGATTACGTGTGCTTGCAATCAATATCCTTGGAAGATTTTTGTCAAATCGGGATAACAACACCAGATATGTGGCACTGAACATGCTGATGAAGGCTGTGAGTGCTGACACTCAGGCAGTGCAGAGACATCGTGCAACGATTCTGGAATGTGTAAAAGATTCTGATGCTTCAATTCGGAAAAGAGCCCTTGAACTTATTTATGTTCTGGTGAATGAAACCAATGTGAAGCCCTTAACAAAAGAGCTAGTAGATTACCTTGAAGTCAGTGATCAAGATTTCAGGGAGGACCTTACTACCAAAATTTGCTCAATAGTTTCAAAGTTTTCCCTTGAGAAGATCTGGTACATTGATCAGATGGTTAAGGTTCTGTCCAAGGCCGGAAATTTCCTAAAAGATGAAGTATGGCATGCCTTAATTGTTGTCATAAGCAACGCTTCCAAGCTTCATGGATACACCGTACGAGCATTATACAAGGCATTTCAAACGTCAACAGAACAG

Protein sequence

>Msa1249310

MNPFSSSMRLRDMIRAIRACKTAAEERTVVRKECAAIRASIDENDQHYRHRNMSKLMFIHMLGYPTHFGQMECLKLISSPGFPEKRIGYLGLMLLVDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPDLAENFVNPATGLLREKHHGVLITGVQLCTELCKISSEALEHIRKKCTEGLVRTLKDLANSSYSPEYDIAGITDPFLHIKLLRLLRELGEGDADASDSMNDILAQVATKTESNKVAGNAILYECVQTIMSIEDNGGLRVLAINILGRFLSNRDNNTRYVALNMLMKAVSADTQAVQRHRATILECVKDSDASIRKRALELIYVLVNETNVKPLTKELVDYLEVSDQDFREDLTTKICSIVSKFSLEKIWYIDQMVKVLSKAGNFLKDEVWHALIVVISNASKLHGYTVRALYKAFQTSTEQ