AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0400420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0400420 MtrunA17_Chr3g0088821 99.629 1078 4 0 1 1078 1 1078 0.0 2236
Msa0400420 MtrunA17_Chr8g0352231 87.315 1080 133 3 1 1078 1 1078 0.0 1923
Msa0400420 MtrunA17_Chr7g0267731 80.292 959 182 5 121 1078 34 986 0.0 1550
Msa0400420 MtrunA17_Chr3g0137951 68.363 1081 316 8 6 1078 25 1087 0.0 1509
Msa0400420 MtrunA17_Chr4g0073711 66.297 1083 291 15 5 1078 21 1038 0.0 1448
Msa0400420 MtrunA17_Chr8g0383701 64.201 1095 357 12 1 1078 19 1095 0.0 1429
Msa0400420 MtrunA17_Chr1g0201731 64.117 1098 350 14 1 1078 23 1096 0.0 1426
Msa0400420 MtrunA17_Chr2g0296991 63.352 1086 310 8 12 1078 28 1044 0.0 1412
Msa0400420 MtrunA17_Chr3g0078671 58.618 1085 388 12 1 1078 19 1049 0.0 1285
Msa0400420 MtrunA17_Chr2g0284211 68.764 890 247 11 198 1078 112 979 0.0 1270
Msa0400420 MtrunA17_Chr8g0379241 72.182 834 212 8 249 1078 174 991 0.0 1268
Msa0400420 MtrunA17_Chr1g0183381 67.063 841 250 6 238 1078 91 904 0.0 1211
Msa0400420 MtrunA17_Chr8g0364641 60.023 878 296 6 203 1078 157 981 0.0 1144
Msa0400420 MtrunA17_Chr8g0364641 60.870 69 27 0 11 79 27 95 4.07e-23 106
Msa0400420 MtrunA17_Chr5g0410641 50.613 897 334 16 244 1061 241 1107 0.0 875
Msa0400420 MtrunA17_Chr4g0039801 50.395 887 331 17 254 1061 272 1128 0.0 865
Msa0400420 MtrunA17_Chr1g0165411 48.701 885 338 13 254 1061 244 1089 0.0 831
Msa0400420 MtrunA17_Chr2g0297351 49.105 894 340 18 250 1063 154 1012 0.0 830
Msa0400420 MtrunA17_Chr7g0269741 49.270 891 345 18 251 1061 293 1156 0.0 827
Msa0400420 MtrunA17_Chr1g0165421 48.594 889 368 15 242 1061 249 1117 0.0 823
Msa0400420 MtrunA17_Chr7g0274751 43.757 857 280 23 254 1061 95 798 0.0 630
Msa0400420 MtrunA17_Chr2g0322361 33.898 767 415 16 300 1052 52 740 1.63e-132 419
Msa0400420 MtrunA17_Chr3g0102531 35.139 683 344 16 287 962 38 628 7.42e-128 407
Msa0400420 MtrunA17_Chr3g0102541 34.993 683 346 15 287 962 38 629 8.11e-128 407
Msa0400420 MtrunA17_Chr2g0322351 34.297 761 410 18 300 1052 49 727 2.15e-125 400
Msa0400420 MtrunA17_Chr2g0322371 32.471 773 423 18 300 1059 47 733 2.56e-125 400
Msa0400420 MtrunA17_Chr4g0025201 32.490 751 411 13 295 1031 43 711 3.30e-123 395
Msa0400420 MtrunA17_Chr3g0095791 29.328 774 438 15 270 1036 18 689 2.09e-109 356
Msa0400420 MtrunA17_Chr1g0186381 28.382 828 476 18 250 1055 5 737 4.07e-102 338
Msa0400420 MtrunA17_Chr3g0102551 38.168 393 216 8 270 648 23 402 9.42e-84 288
Msa0400420 MtrunA17_Chr3g0102551 29.642 307 199 9 755 1049 428 729 2.66e-32 135
Msa0400420 MtrunA17_Chr2g0322341 43.934 305 158 4 301 605 52 343 1.16e-81 270
Msa0400420 MtrunA17_Chr4g0046401 37.135 377 208 6 271 639 24 379 1.92e-73 258
Msa0400420 MtrunA17_Chr4g0046401 31.304 345 227 6 714 1052 390 730 3.44e-43 169
Msa0400420 MtrunA17_Chr2g0307191 33.493 418 228 9 271 681 19 393 2.45e-67 240
Msa0400420 MtrunA17_Chr2g0307191 26.994 326 224 7 720 1037 372 691 1.11e-30 129
Msa0400420 MtrunA17_Chr2g0298581 34.853 373 209 8 271 642 19 358 2.06e-65 234
Msa0400420 MtrunA17_Chr2g0298581 27.607 326 226 6 717 1036 369 690 3.26e-35 144
Msa0400420 MtrunA17_Chr3g0077511 34.060 367 210 4 271 637 19 353 9.42e-65 233
Msa0400420 MtrunA17_Chr3g0077511 27.052 329 228 6 717 1037 369 693 3.07e-37 150
Msa0400420 MtrunA17_Chr0c03g0490021 81.148 122 23 0 908 1029 1 122 1.44e-59 200
Msa0400420 MtrunA17_Chr2g0322331 31.978 369 236 7 693 1052 9 371 3.05e-54 194
Msa0400420 MtrunA17_Chr3g0126641 45.299 234 85 8 575 789 1 210 1.01e-50 177
Msa0400420 MtrunA17_Chr8g0355061 96.552 58 2 0 908 965 1 58 6.98e-33 121
Msa0400420 MtrunA17_Chr7g0252781 69.412 85 23 2 996 1078 6 89 1.77e-32 121
Msa0400420 MtrunA17_Chr2g0307241 39.375 160 88 3 271 430 19 169 3.38e-31 122
Msa0400420 MtrunA17_Chr3g0094861 32.328 232 126 5 7 220 23 241 9.69e-29 118
Msa0400420 MtrunA17_Chr7g0267741 56.716 67 29 0 13 79 1 67 7.89e-26 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0400420 AT5G05170.1 85.065 1078 147 7 2 1078 1 1065 0.0 1900
Msa0400420 AT4G32410.1 68.697 1067 302 11 5 1063 23 1065 0.0 1506
Msa0400420 AT2G25540.1 67.389 1061 314 12 5 1064 17 1046 0.0 1483
Msa0400420 AT5G17420.1 67.195 1073 274 14 11 1078 27 1026 0.0 1460
Msa0400420 AT5G44030.2 64.717 1094 324 11 15 1078 17 1078 0.0 1431
Msa0400420 AT5G44030.1 64.899 1094 293 14 15 1078 17 1049 0.0 1424
Msa0400420 AT5G09870.1 64.154 1088 342 14 1 1078 19 1068 0.0 1417
Msa0400420 AT5G64740.1 63.886 1091 355 13 1 1078 19 1083 0.0 1410
Msa0400420 AT2G21770.1 62.182 1100 362 14 1 1078 19 1086 0.0 1388
Msa0400420 AT4G39350.1 63.636 1089 360 10 1 1078 19 1082 0.0 1379
Msa0400420 AT4G18780.1 61.049 1068 316 18 18 1078 6 980 0.0 1265
Msa0400420 AT5G44030.3 74.611 772 165 6 336 1078 1 770 0.0 1194
Msa0400420 AT3G03050.1 50.056 885 335 18 254 1061 277 1131 0.0 855
Msa0400420 AT5G16910.1 49.718 885 335 18 254 1061 280 1131 0.0 841
Msa0400420 AT4G38190.1 48.912 873 358 14 250 1063 251 1094 0.0 835
Msa0400420 AT1G02730.1 49.833 897 344 18 248 1061 295 1168 0.0 835
Msa0400420 AT2G33100.2 48.216 925 359 19 225 1061 132 1024 0.0 830
Msa0400420 AT2G33100.1 48.216 925 359 19 225 1061 132 1024 0.0 830
Msa0400420 AT1G32180.1 47.919 889 372 16 244 1059 96 966 0.0 804
Msa0400420 AT1G32180.2 47.919 889 372 16 244 1059 96 966 0.0 804
Msa0400420 AT2G32530.1 32.294 802 437 18 255 1033 10 728 1.57e-124 399
Msa0400420 AT2G32620.1 33.333 759 404 18 299 1033 50 730 1.52e-122 394
Msa0400420 AT4G15320.3 33.002 806 426 21 255 1031 10 730 1.56e-121 391
Msa0400420 AT4G15320.5 33.002 806 426 21 255 1031 10 730 1.74e-121 391
Msa0400420 AT2G32540.1 31.847 785 430 16 298 1057 49 753 9.02e-121 389
Msa0400420 AT2G32610.1 30.566 831 466 19 255 1057 10 757 1.03e-118 384
Msa0400420 AT4G15320.4 32.883 815 430 22 255 1031 10 745 1.52e-118 384
Msa0400420 AT2G32620.3 36.210 591 298 13 299 884 50 566 7.88e-113 363
Msa0400420 AT4G15290.1 32.457 761 404 19 299 1031 50 728 9.28e-113 367
Msa0400420 AT2G32620.4 32.908 705 379 16 352 1033 1 634 1.17e-110 359
Msa0400420 AT4G15320.2 32.376 766 367 20 255 967 10 677 4.85e-106 350
Msa0400420 AT2G32620.2 35.993 539 267 12 299 832 50 515 1.18e-100 328
Msa0400420 AT4G15320.1 31.172 802 372 21 255 967 10 720 9.48e-99 332
Msa0400420 AT1G55850.1 41.775 383 199 8 264 639 26 391 9.20e-86 293
Msa0400420 AT1G55850.1 29.114 316 210 7 744 1049 408 719 2.42e-33 139
Msa0400420 AT4G24010.1 38.560 389 213 9 263 643 19 389 6.23e-78 272
Msa0400420 AT4G24010.1 32.450 302 194 4 739 1035 408 704 1.25e-42 168
Msa0400420 AT4G23990.1 38.182 385 214 8 263 639 38 406 3.08e-76 267
Msa0400420 AT4G23990.1 33.010 309 195 5 731 1033 419 721 1.41e-43 171
Msa0400420 AT4G24000.1 37.113 388 213 9 263 643 16 379 1.19e-73 259
Msa0400420 AT4G24000.1 31.650 297 189 6 744 1033 403 692 1.58e-40 161
Msa0400420 AT4G23990.2 33.010 309 195 5 731 1033 205 507 6.18e-44 168
Msa0400420 AT4G23990.2 43.750 192 99 5 455 639 3 192 1.28e-38 152
Msa0400420 AT4G24000.2 30.408 319 206 7 744 1053 211 522 5.41e-41 159
Msa0400420 AT4G24000.2 44.103 195 93 6 455 643 3 187 5.04e-39 154

Find 300 sgRNAs with CRISPR-Local

Find 701 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAAGCTTGCTGCATTTAA+AGG 0.096133 3_2:+24824733 Msa0400420:CDS
GGTGGAGAAATGAACAATTT+TGG 0.098473 3_2:+24826152 Msa0400420:CDS
CCCCTTCCTTAAAGGTCTTA+TGG 0.130024 3_2:+24826471 Msa0400420:CDS
CATCTTTACCCCTTCCTTAA+AGG 0.173534 3_2:+24826463 Msa0400420:CDS
GCCTCCTTGAGAAGAGTTTC+TGG 0.183016 3_2:-24823390 None:intergenic
GAAACTTCCTTATCATAATT+TGG 0.223992 3_2:-24818927 None:intergenic
TTCAATAGAACTGCTTTATA+TGG 0.227409 3_2:+24822564 Msa0400420:CDS
GTCACAGAAGATATTCTTAC+TGG 0.248797 3_2:+24824667 Msa0400420:CDS
CGGTTCACAGGAAGCCATTT+GGG 0.250743 3_2:-24819972 None:intergenic
CGTTTCCCGCGAGCATTTAC+AGG 0.254624 3_2:-24819147 None:intergenic
CGATGGTTGGCGTTCGGTTC+TGG 0.263817 3_2:-24826498 None:intergenic
CCCTTCCTTAAAGGTCTTAT+GGG 0.269390 3_2:+24826472 Msa0400420:CDS
TGCATCACCCATCCTTCTTC+AGG 0.270437 3_2:-24820947 None:intergenic
CAGAACTATACATGTTTAAA+TGG 0.279204 3_2:+24826296 Msa0400420:CDS
GCTCTTCTAAGATGCTAATA+AGG 0.286737 3_2:-24817796 None:intergenic
CCAGTGACTCTTGTCGTAAA+AGG 0.288714 3_2:-24826580 None:intergenic
ATCTGGACAGGCTTTCATTA+AGG 0.290463 3_2:+24820003 Msa0400420:CDS
CATCAGAATTTGCAAGGAAA+TGG 0.294257 3_2:+24820596 Msa0400420:CDS
TGGTCTCTGGTGTTGTTTCC+AGG 0.294599 3_2:-24820986 None:intergenic
CAGTACTGTTGATCCGTTAA+AGG 0.296186 3_2:+24820447 Msa0400420:CDS
GATTCCACACATCTCAGATT+TGG 0.300166 3_2:-24826605 None:intergenic
CCACAGATTGGGTGGATCTA+TGG 0.303271 3_2:+24824640 Msa0400420:intron
TATTCATTCCTTGCTTCAAT+TGG 0.305094 3_2:+24817285 Msa0400420:five_prime_UTR
CAAGTGCTTCGATGGGCTTT+AGG 0.318223 3_2:+24824790 Msa0400420:CDS
TTAGTAACATTGCAAGTATA+TGG 0.321656 3_2:+24826053 Msa0400420:CDS
TCAGGTAGTCCTGCAATTCT+TGG 0.322057 3_2:+24818762 Msa0400420:intron
TATCAGTTATATGTGAAGTT+TGG 0.322604 3_2:+24819919 Msa0400420:CDS
ATTAAATTATGTGCAGTTGA+TGG 0.324608 3_2:+24826756 Msa0400420:three_prime_UTR
TTGTGGTGTTTGTGCCTTCC+CGG 0.334481 3_2:+24818082 Msa0400420:CDS
CTCTCAAGATCTTATCTTTG+AGG 0.338952 3_2:+24817321 Msa0400420:five_prime_UTR
GGCGTCCCATAAGACCTTTA+AGG 0.342891 3_2:-24826477 None:intergenic
GCCTCTACACTTATGGAAAA+TGG 0.345356 3_2:+24823345 Msa0400420:CDS
CGCCAACCATCGTGGTTGTT+TGG 0.345579 3_2:+24826509 Msa0400420:CDS
TATCTTCTATTTCAGACATC+TGG 0.352560 3_2:+24819081 Msa0400420:intron
CAATCATGGGGACCACTCTT+TGG 0.354231 3_2:+24826409 Msa0400420:CDS
TTTCTTTCCATCTTTGCAAC+TGG 0.356774 3_2:+24826088 Msa0400420:CDS
CAATTTCCACAGAGGTTTGA+TGG 0.357048 3_2:+24822002 Msa0400420:CDS
ATTCCACACATCTCAGATTT+GGG 0.365840 3_2:-24826604 None:intergenic
CAGTATTGGCTGTCACAATT+GGG 0.370306 3_2:-24820474 None:intergenic
AGGTTTCTATTCCATCTTCT+AGG 0.371247 3_2:+24819790 Msa0400420:CDS
AACCTTGTCGGAGTTGTTGC+AGG 0.374614 3_2:+24826358 Msa0400420:CDS
TCACGATCTCCAAGAATTGC+AGG 0.374891 3_2:-24818771 None:intergenic
TGAATTGTACTTGAAGTCAT+TGG 0.375703 3_2:-24818820 None:intergenic
GTATCAGCTGTGCTTACTAA+TGG 0.381961 3_2:+24821867 Msa0400420:CDS
TTTCTGTCGGTCAATTAGAT+TGG 0.382304 3_2:+24817215 Msa0400420:five_prime_UTR
ACCTTTAAATGCAGCAAGCT+TGG 0.384857 3_2:-24824734 None:intergenic
ACAGTATTGGCTGTCACAAT+TGG 0.385360 3_2:-24820475 None:intergenic
CGATATTATCACCACAAATC+TGG 0.387882 3_2:-24818028 None:intergenic
TGAACTACCTGGATCATTCC+TGG 0.393323 3_2:-24821010 None:intergenic
TGTGAACCGTGAAACATATC+TGG 0.394605 3_2:+24819986 Msa0400420:CDS
GCTACTTCTGAAAGAGGAAT+AGG 0.394800 3_2:+24819421 Msa0400420:CDS
AGAAGGGGAATGGAAGTGAT+TGG 0.394810 3_2:-24824916 None:intergenic
GCCACTCACAAGTGCATTCA+TGG 0.396016 3_2:-24821495 None:intergenic
TTCCCTATGCAGCAAACATC+AGG 0.396400 3_2:+24819296 Msa0400420:intron
TTTGTGCCTTCCCGGTTTGT+AGG 0.399527 3_2:+24818090 Msa0400420:CDS
TCATAACACGGCCTACAAAC+CGG 0.405113 3_2:-24818101 None:intergenic
ACGGTTCACAGGAAGCCATT+TGG 0.408365 3_2:-24819973 None:intergenic
GGTTTACTCAAAGTACTTGC+TGG 0.408887 3_2:+24826217 Msa0400420:CDS
TGGGTACGGGATTTGTAATT+CGG 0.409998 3_2:-24819875 None:intergenic
CCTTTAAATGCAGCAAGCTT+GGG 0.412595 3_2:-24824733 None:intergenic
ATGAGCCTTGAGAGAAGGTT+TGG 0.415751 3_2:+24823303 Msa0400420:CDS
TTTATAATGAGAAGAGTTGT+TGG 0.416640 3_2:-24826337 None:intergenic
GAATTCAAAATTCGTATCAA+TGG 0.417011 3_2:+24820899 Msa0400420:CDS
GATCATTCCTGGATGGTCTC+TGG 0.420551 3_2:-24820999 None:intergenic
ACATCCAGTACCCACATAAA+CGG 0.421617 3_2:-24822538 None:intergenic
GCATCACCCATCCTTCTTCA+GGG 0.425061 3_2:-24820946 None:intergenic
CATTCAAGGTCCCGTTTATG+TGG 0.427944 3_2:+24822527 Msa0400420:CDS
CTTCTCATTATAAACCTTGT+CGG 0.428224 3_2:+24826346 Msa0400420:CDS
CAGGGTTGCTGAACCAGGAT+TGG 0.428474 3_2:+24819315 Msa0400420:CDS
AATATCGGTAGTGCTGTTAA+TGG 0.429211 3_2:+24818044 Msa0400420:CDS
AAGGATACCAGTTGCAAAGA+TGG 0.431433 3_2:-24826095 None:intergenic
AGAGGTTTGATGGTATTGAT+AGG 0.435261 3_2:+24822012 Msa0400420:CDS
GTCTAGAGGATATAGAAGAA+GGG 0.441165 3_2:+24822739 Msa0400420:CDS
CAGATTTGTGGTGATAATAT+CGG 0.441920 3_2:+24818029 Msa0400420:CDS
ATCAGAATTTGCAAGGAAAT+GGG 0.442885 3_2:+24820597 Msa0400420:CDS
CCCATCTGGTACGGTTATAG+TGG 0.443405 3_2:+24824844 Msa0400420:CDS
CAAAGAGTGGTCCCCATGAT+TGG 0.443750 3_2:-24826408 None:intergenic
AGAGGGTTGGATGGCATTCA+AGG 0.444572 3_2:+24822513 Msa0400420:CDS
TTAACAGCGGCTACCAATCA+TGG 0.446185 3_2:+24826395 Msa0400420:CDS
GCCTGTCCAGATATGTTTCA+CGG 0.447132 3_2:-24819992 None:intergenic
CTGGTGTTGTTTCCAGGCCA+AGG 0.447928 3_2:-24820980 None:intergenic
AATCACATTCCTCGGCTAAC+CGG 0.449192 3_2:+24818954 Msa0400420:CDS
CCTTGCAAATTCTGATGTCT+CGG 0.456081 3_2:-24820590 None:intergenic
GTTTCTCGTGAAAAGCGTCC+AGG 0.460415 3_2:+24821446 Msa0400420:CDS
ATTCATTCCTTGCTTCAATT+GGG 0.461337 3_2:+24817286 Msa0400420:five_prime_UTR
TCATGTTATGTCTCTGATGA+TGG 0.462966 3_2:+24820538 Msa0400420:CDS
AGATGCACGCCCGTGGTTGG+AGG 0.463013 3_2:+24824695 Msa0400420:CDS
CTGATCCAATATCCAAGAAA+AGG 0.465433 3_2:-24819946 None:intergenic
TTATGAAGATAAATCAGAAT+GGG 0.466240 3_2:+24823434 Msa0400420:CDS
GAAAAGAAAAGCTGGCAGAT+TGG 0.466389 3_2:+24826638 Msa0400420:three_prime_UTR
CATCCAGTACCCACATAAAC+GGG 0.467474 3_2:-24822537 None:intergenic
TGTTGACTACCCAGTGGATA+AGG 0.468108 3_2:+24820513 Msa0400420:CDS
CAAACACCACAAGCAATAAA+CGG 0.469512 3_2:-24818071 None:intergenic
GATCTTTGACAAATGATGCT+TGG 0.470277 3_2:-24820705 None:intergenic
AGTCTTGTTTCTTCACTTTG+CGG 0.473059 3_2:+24822624 Msa0400420:CDS
CAAGCTACATTACCCAATCC+TGG 0.473128 3_2:-24819328 None:intergenic
AAACAACAGCAAAGCCTTGA+GGG 0.476052 3_2:+24821926 Msa0400420:CDS
TATGAGTATGAAAGGAAAGA+TGG 0.476280 3_2:+24818119 Msa0400420:CDS
ATGGACTCAGAAGGAGAAGC+TGG 0.476441 3_2:+24817835 Msa0400420:CDS
TTGCTACCCAACGTCTTCAT+CGG 0.477149 3_2:-24817999 None:intergenic
CAACCACGATGGTTGGCGTT+CGG 0.477716 3_2:-24826504 None:intergenic
CAAGAGACAGACGGCAGGTA+AGG 0.478428 3_2:-24824950 None:intergenic
AGGGTTGCTGAACCAGGATT+GGG 0.479793 3_2:+24819316 Msa0400420:CDS
ATTTCATATTTCTTGCAGAA+AGG 0.480569 3_2:-24820622 None:intergenic
GTTTGAACCAAGTGCTTCGA+TGG 0.481320 3_2:+24824782 Msa0400420:CDS
AAACGATCGGAAAGATTGAT+AGG 0.482216 3_2:-24824763 None:intergenic
GCAATTCATGTTATCAGTTG+TGG 0.482299 3_2:+24823411 Msa0400420:CDS
GTCGAAAAGCACATCAGTAC+TGG 0.482851 3_2:-24819455 None:intergenic
TATGCTTGGGTTTGATAGGA+GGG 0.483252 3_2:-24822593 None:intergenic
TTATGCTTGGGTTTGATAGG+AGG 0.485569 3_2:-24822594 None:intergenic
AAGCTCGACAACCACTTTCG+AGG 0.485682 3_2:+24819766 Msa0400420:CDS
GCATCTTAGAAGAGCTAAGT+AGG 0.485788 3_2:+24817804 Msa0400420:five_prime_UTR
AGTCTAGAGGATATAGAAGA+AGG 0.487352 3_2:+24822738 Msa0400420:CDS
GATATAGAAGAAGGGGTGGA+AGG 0.489730 3_2:+24822747 Msa0400420:CDS
TATTGGATCAGTTCCCCAAA+TGG 0.492173 3_2:+24819958 Msa0400420:CDS
AGACTAAAGACGGGCACAGT+TGG 0.492450 3_2:-24822720 None:intergenic
TAACCACAACGCATAAGCAT+TGG 0.493182 3_2:-24819895 None:intergenic
CAAAGATCGTAGAGCAATGA+AGG 0.495592 3_2:+24820720 Msa0400420:CDS
ACGCATGTTGAGTTGGCAAA+TGG 0.496488 3_2:+24818875 Msa0400420:CDS
AACATCAGGGTTGCTGAACC+AGG 0.497336 3_2:+24819310 Msa0400420:CDS
GTGTATACTACAAGAATGTT+CGG 0.498097 3_2:-24826906 None:intergenic
AACCACAACGCATAAGCATT+GGG 0.500114 3_2:-24819894 None:intergenic
CTTTAAGGAAGGGGTAAAGA+TGG 0.500917 3_2:-24826462 None:intergenic
TAAGTCGGCATTGTCCCATC+TGG 0.504570 3_2:+24824830 Msa0400420:CDS
ATTTGAGTTGCAGATATGAT+CGG 0.504666 3_2:+24820383 Msa0400420:intron
TCTAGAGGATATAGAAGAAG+GGG 0.505946 3_2:+24822740 Msa0400420:CDS
TATGGATTTATCCTAGAAGA+TGG 0.506219 3_2:-24819801 None:intergenic
GAAGGTTAAAGTGGCTTGAG+AGG 0.507461 3_2:+24824866 Msa0400420:CDS
GTTATGAAGATAAATCAGAA+TGG 0.508333 3_2:+24823433 Msa0400420:CDS
AGAGGATATAGAAGAAGGGG+TGG 0.508591 3_2:+24822743 Msa0400420:CDS
CAGTGACTCTTGTCGTAAAA+GGG 0.508629 3_2:-24826579 None:intergenic
GGTCCCGTTTATGTGGGTAC+TGG 0.510704 3_2:+24822534 Msa0400420:CDS
CAGGATTGGGTAATGTAGCT+TGG 0.512080 3_2:+24819329 Msa0400420:CDS
ATGAGTATGAAAGGAAAGAT+GGG 0.512365 3_2:+24818120 Msa0400420:CDS
AGCAAAGTCTGCCAGATTTG+TGG 0.512403 3_2:+24818017 Msa0400420:CDS
TTTGAGTTGCAGATATGATC+GGG 0.512495 3_2:+24820384 Msa0400420:intron
CAATCAAGATTCAATAAGAA+AGG 0.513986 3_2:-24821891 None:intergenic
AGATATGTTTCACGGTTCAC+AGG 0.516002 3_2:-24819984 None:intergenic
CAAGATGGTACACCTTGGCC+TGG 0.516752 3_2:+24820968 Msa0400420:CDS
TTCTTGTGATGTTGGAACCC+TGG 0.517219 3_2:-24821464 None:intergenic
TGATGCTCCAAATTATGATA+AGG 0.517626 3_2:+24818920 Msa0400420:CDS
CACCGGCCTTCTTGTGATGT+TGG 0.518453 3_2:-24821472 None:intergenic
AAGAATTGATAGTACAGTAT+TGG 0.518904 3_2:-24820488 None:intergenic
TTGAGTTGGCAAATGGCGTA+TGG 0.519250 3_2:+24818882 Msa0400420:CDS
CTGCTAGAGAAAAGAAAAGC+TGG 0.521163 3_2:+24826630 Msa0400420:exon
TAACAAGTTTATTATTCCAC+AGG 0.521586 3_2:+24824975 Msa0400420:CDS
CAAGTACTTTGAGTAAACCT+TGG 0.522532 3_2:-24826213 None:intergenic
CTTATATTCCACAGATTGGG+TGG 0.523148 3_2:+24824632 Msa0400420:intron
TCAAAAGCTTCAGATGAAGA+TGG 0.524689 3_2:+24826265 Msa0400420:CDS
GATCTGAGTTGCTTCTGAAG+TGG 0.524780 3_2:+24817674 Msa0400420:intron
ATTAATAAAAGAGACTTGGA+TGG 0.525126 3_2:-24817240 None:intergenic
ACAGATAAACTTGAGAGGGT+TGG 0.525511 3_2:+24822500 Msa0400420:intron
TACCCAATGCTTATGCGTTG+TGG 0.527215 3_2:+24819892 Msa0400420:CDS
GGTCAAGCTACTTCTGAAAG+AGG 0.527295 3_2:+24819415 Msa0400420:CDS
TTTATGATGGATCCCAACCT+TGG 0.528266 3_2:+24821960 Msa0400420:CDS
CATAACACGGCCTACAAACC+GGG 0.530845 3_2:-24818100 None:intergenic
TTTCTCACAATCACATTCCT+CGG 0.532162 3_2:+24818946 Msa0400420:CDS
TGGCAAATGGCGTATGGGCG+AGG 0.534020 3_2:+24818888 Msa0400420:CDS
GCTTGGAAAGAAAGAGTTGA+TGG 0.535240 3_2:+24819346 Msa0400420:CDS
TTAAGATGCACGCCCGTGGT+TGG 0.535265 3_2:+24824692 Msa0400420:CDS
ACAATACATGAGAAGGGGAA+TGG 0.535522 3_2:-24824926 None:intergenic
TGAAAGTCCCTGAAGAAGGA+TGG 0.535766 3_2:+24820939 Msa0400420:CDS
TAACATGAGACCTTATCCAC+TGG 0.536413 3_2:-24820523 None:intergenic
GATGCCATTGACATCCTCTC+AGG 0.536458 3_2:-24819123 None:intergenic
GACCAAACAACCACGATGGT+TGG 0.536585 3_2:-24826511 None:intergenic
TCGACAACCACTTTCGAGGA+AGG 0.537065 3_2:+24819770 Msa0400420:CDS
CACAAATGAGCCTTGAGAGA+AGG 0.538258 3_2:+24823298 Msa0400420:CDS
AACGCATAAGCATTGGGTAC+GGG 0.538670 3_2:-24819888 None:intergenic
GGCCGTGTTATGAGTATGAA+AGG 0.538679 3_2:+24818111 Msa0400420:CDS
TATATCCTCTAGACTAAAGA+CGG 0.541324 3_2:-24822730 None:intergenic
TCCACTATAACCGTACCAGA+TGG 0.541495 3_2:-24824845 None:intergenic
GGTGATCCGTTTATTGCTTG+TGG 0.542345 3_2:+24818065 Msa0400420:CDS
CTAAAGCCCATCGAAGCACT+TGG 0.544352 3_2:-24824789 None:intergenic
GTTATAGTGGAAGGTTAAAG+TGG 0.549497 3_2:+24824857 Msa0400420:CDS
TCGCAGAACGCATGTTGAGT+TGG 0.550049 3_2:+24818868 Msa0400420:CDS
TAACAGCGGCTACCAATCAT+GGG 0.550342 3_2:+24826396 Msa0400420:CDS
GCAGTGAAAGTCCCTGAAGA+AGG 0.550431 3_2:+24820935 Msa0400420:CDS
GATAAGCCGATGAAGACGTT+GGG 0.550649 3_2:+24817993 Msa0400420:CDS
TCGATGGGCTTTAGGTTCAG+TGG 0.550773 3_2:+24824798 Msa0400420:CDS
AGTATTGGCTGTCACAATTG+GGG 0.552573 3_2:-24820473 None:intergenic
TTGTACAGATAAACTTGAGA+GGG 0.553327 3_2:+24822496 Msa0400420:intron
GGCGTATGGGCGAGGTGAGG+AGG 0.554311 3_2:+24818896 Msa0400420:CDS
CCATAAGACCTTTAAGGAAG+GGG 0.554857 3_2:-24826471 None:intergenic
ATAGAAACCTTCCTCGAAAG+TGG 0.554909 3_2:-24819777 None:intergenic
AAAGAAAACAGTATTACGAT+TGG 0.558410 3_2:-24822048 None:intergenic
TTAAGATCAGACGAATATGA+TGG 0.559054 3_2:-24819183 None:intergenic
AGACCATCCAGGAATGATCC+AGG 0.560854 3_2:+24821003 Msa0400420:CDS
CTGGTATCCTTGAGATGAGG+TGG 0.562369 3_2:+24826107 Msa0400420:CDS
TAAGGTACAATACATGAGAA+GGG 0.565053 3_2:-24824932 None:intergenic
AATATATAGACCTCCAACCA+CGG 0.565841 3_2:-24824705 None:intergenic
CAGTGGAAATTCTACTAAGT+CGG 0.566869 3_2:+24824815 Msa0400420:CDS
GGAAAGAAAGAGTTGATGGC+TGG 0.567591 3_2:+24819350 Msa0400420:CDS
CAGTATCAAGTCCTCCACTC+TGG 0.568044 3_2:-24821394 None:intergenic
CGGCATTGTCCCATCTGGTA+CGG 0.568241 3_2:+24824835 Msa0400420:CDS
TTGAACAACCTCTTGTCCAC+CGG 0.570119 3_2:-24818973 None:intergenic
GAAGATTAATAAAAGAGACT+TGG 0.570421 3_2:-24817244 None:intergenic
AATACTGCTCCGATGAGCAC+AGG 0.570599 3_2:+24819394 Msa0400420:CDS
TTCCAACATCACAAGAAGGC+CGG 0.570676 3_2:+24821470 Msa0400420:CDS
TTTGAACCAAGTGCTTCGAT+GGG 0.570895 3_2:+24824783 Msa0400420:CDS
GTAAGGTACAATACATGAGA+AGG 0.570913 3_2:-24824933 None:intergenic
AATTGACTACTTGAAAGATA+AGG 0.572515 3_2:+24820681 Msa0400420:CDS
CTTGTTTCTTCACTTTGCGG+TGG 0.572905 3_2:+24822627 Msa0400420:CDS
CCCATAAGACCTTTAAGGAA+GGG 0.575370 3_2:-24826472 None:intergenic
TCCCATAAGACCTTTAAGGA+AGG 0.575968 3_2:-24826473 None:intergenic
ACCGTGAAACATATCTGGAC+AGG 0.576330 3_2:+24819991 Msa0400420:CDS
CCGAGACATCAGAATTTGCA+AGG 0.577067 3_2:+24820590 Msa0400420:CDS
ATAATGAGAAGAGTTGTTGG+TGG 0.580121 3_2:-24826334 None:intergenic
GAGATGAGGTGGAGTGGTGT+TGG 0.580501 3_2:+24826118 Msa0400420:CDS
AACTCCAGAAACTCTTCTCA+AGG 0.581296 3_2:+24823386 Msa0400420:CDS
AAGCACTTGGTTCAAACGAT+CGG 0.581399 3_2:-24824776 None:intergenic
CACCACTCCACCTCATCTCA+AGG 0.581452 3_2:-24826114 None:intergenic
GAAAGTCCCTGAAGAAGGAT+GGG 0.581544 3_2:+24820940 Msa0400420:CDS
TTCCTTTCATACTCATAACA+CGG 0.582429 3_2:-24818113 None:intergenic
TGGACTCAGAAGGAGAAGCT+GGG 0.582489 3_2:+24817836 Msa0400420:CDS
AATGGCGTATGGGCGAGGTG+AGG 0.582951 3_2:+24818893 Msa0400420:CDS
TTCTTTGAGAAGTACCACTC+AGG 0.585156 3_2:-24820658 None:intergenic
AGCTAAGTAGGAGACTATGA+TGG 0.585252 3_2:+24817816 Msa0400420:exon
GTAGCTTGACCTGTGCTCAT+CGG 0.585652 3_2:-24819403 None:intergenic
ATTCAAGGTCCCGTTTATGT+GGG 0.586347 3_2:+24822528 Msa0400420:CDS
CTCACCTGAGAGGATGTCAA+TGG 0.586728 3_2:+24819119 Msa0400420:CDS
CACAAGTGCATTCATGGCAC+CGG 0.587864 3_2:-24821489 None:intergenic
GGAAGTGATTGGATAGATTG+TGG 0.589300 3_2:-24824905 None:intergenic
CTTGGAGATCGTGAAGAGGA+TGG 0.590122 3_2:+24818780 Msa0400420:CDS
ATATATAGACCTCCAACCAC+GGG 0.590938 3_2:-24824704 None:intergenic
CGAGAAACATAGACTAAACG+TGG 0.591985 3_2:-24821431 None:intergenic
CCACTATAACCGTACCAGAT+GGG 0.592058 3_2:-24824844 None:intergenic
GGATAAGCCGATGAAGACGT+TGG 0.593259 3_2:+24817992 Msa0400420:intron
TAGGATAAATCCATACCGTA+TGG 0.594537 3_2:+24819809 Msa0400420:CDS
ACTGACCAAACCTTCTCTCA+AGG 0.595696 3_2:-24823308 None:intergenic
ATAAACTTGAGAGGGTTGGA+TGG 0.597909 3_2:+24822504 Msa0400420:CDS
TCGGCTAACCGGTGGACAAG+AGG 0.598073 3_2:+24818965 Msa0400420:CDS
CATCTCCTGTAAATGCTCGC+GGG 0.600452 3_2:+24819142 Msa0400420:CDS
CACATTCCTCGGCTAACCGG+TGG 0.601665 3_2:+24818957 Msa0400420:CDS
AAGAAAAGTTTACCAAAGAG+TGG 0.602401 3_2:-24826421 None:intergenic
CTACCTGGATCATTCCTGGA+TGG 0.604234 3_2:-24821006 None:intergenic
AGAATAATGACCATACGGTA+TGG 0.604646 3_2:-24819819 None:intergenic
GTGGTGTTGGAATTGATGAA+TGG 0.605403 3_2:+24826131 Msa0400420:CDS
TTGCAGATATGATCGGGAAG+GGG 0.606348 3_2:+24820390 Msa0400420:intron
CAACGCATAAGCATTGGGTA+CGG 0.606764 3_2:-24819889 None:intergenic
ACCGTATGGTCATTATTCTG+CGG 0.607361 3_2:+24819823 Msa0400420:CDS
AGTTGCAGATATGATCGGGA+AGG 0.608761 3_2:+24820388 Msa0400420:intron
GTTGCAGATATGATCGGGAA+GGG 0.608801 3_2:+24820389 Msa0400420:intron
TTTAAACATGTATAGTTCTG+CGG 0.608911 3_2:-24826293 None:intergenic
GCCGCAGAATAATGACCATA+CGG 0.609025 3_2:-24819824 None:intergenic
TCTGGTACGGTTATAGTGGA+AGG 0.609046 3_2:+24824848 Msa0400420:CDS
TTTGTACAGATAAACTTGAG+AGG 0.609294 3_2:+24822495 Msa0400420:intron
AGAAGAACCCAATTGAAGCA+AGG 0.609993 3_2:-24817293 None:intergenic
TTTCTCGTGAAAAGCGTCCA+GGG 0.610523 3_2:+24821447 Msa0400420:CDS
GCATCTCCTGTAAATGCTCG+CGG 0.611021 3_2:+24819141 Msa0400420:CDS
GTGTTGGAATTGATGAATGG+TGG 0.612024 3_2:+24826134 Msa0400420:CDS
TCAACGGCTGCTAACTGTGA+AGG 0.613255 3_2:-24820415 None:intergenic
TGTGCCCGTCTTTAGTCTAG+AGG 0.615832 3_2:+24822725 Msa0400420:CDS
AAGTACCACTCAGGTGCTCG+TGG 0.619244 3_2:-24820649 None:intergenic
CAAAGTGAAGAAACAAGACT+AGG 0.620094 3_2:-24822621 None:intergenic
AACAACACCAGAGACCATCC+AGG 0.622703 3_2:+24820992 Msa0400420:CDS
GGATTTAAGATGCACGCCCG+TGG 0.624138 3_2:+24824688 Msa0400420:CDS
GGACTCAGAAGGAGAAGCTG+GGG 0.624216 3_2:+24817837 Msa0400420:CDS
AACATGAGACCTTATCCACT+GGG 0.626855 3_2:-24820522 None:intergenic
ATCCTTGAGATGAGGTGGAG+TGG 0.629054 3_2:+24826112 Msa0400420:CDS
GAGACTATGATGGACTCAGA+AGG 0.631748 3_2:+24817826 Msa0400420:exon
TTCCTGCAACAACTCCGACA+AGG 0.632332 3_2:-24826360 None:intergenic
TCCCTATGCAGCAAACATCA+GGG 0.634130 3_2:+24819297 Msa0400420:intron
AAGGTACAATACATGAGAAG+GGG 0.636740 3_2:-24824931 None:intergenic
CATTGACATCCTCTCAGGTG+AGG 0.637861 3_2:-24819118 None:intergenic
TGAGTTGGCAAATGGCGTAT+GGG 0.637971 3_2:+24818883 Msa0400420:CDS
ATATCCTCTAGACTAAAGAC+GGG 0.638756 3_2:-24822729 None:intergenic
TAAACAACAGCAAAGCCTTG+AGG 0.639044 3_2:+24821925 Msa0400420:CDS
GGTTCACAGGAAGCCATTTG+GGG 0.639851 3_2:-24819971 None:intergenic
AGTGGAGGACTTGATACTGA+TGG 0.639980 3_2:+24821398 Msa0400420:CDS
TAAATCAGAATGGGGAACTG+AGG 0.641261 3_2:+24823443 Msa0400420:CDS
TATGAAGATAAATCAGAATG+GGG 0.641391 3_2:+24823435 Msa0400420:CDS
AGGGTTCCAACATCACAAGA+AGG 0.641400 3_2:+24821466 Msa0400420:CDS
GTTTCTGGAGTTGCAGACTG+AGG 0.642413 3_2:-24823375 None:intergenic
GTATTGGCTGTCACAATTGG+GGG 0.644193 3_2:-24820472 None:intergenic
AAAACACATAGCTTCCCTCA+AGG 0.646852 3_2:-24821940 None:intergenic
TCTTGTCCACCGGTTAGCCG+AGG 0.648285 3_2:-24818963 None:intergenic
GAAGGATGGGTGATGCAAGA+TGG 0.649060 3_2:+24820953 Msa0400420:CDS
TCAATACCATCAAACCTCTG+TGG 0.656019 3_2:-24822008 None:intergenic
AATTCTTGGAGATCGTGAAG+AGG 0.657041 3_2:+24818776 Msa0400420:CDS
ATCTCTTACGCTGTTAACAG+CGG 0.659526 3_2:+24826382 Msa0400420:CDS
ATACAATCACAACAGTTGAG+TGG 0.667031 3_2:-24826677 None:intergenic
TTAGTCAAGAGACAGACGGC+AGG 0.667332 3_2:-24824955 None:intergenic
ACACGGCCTACAAACCGGGA+AGG 0.669111 3_2:-24818096 None:intergenic
TATCTGCAGCCTCACCTGAG+AGG 0.670320 3_2:+24819109 Msa0400420:CDS
CAACTGGTATCCTTGAGATG+AGG 0.672885 3_2:+24826104 Msa0400420:CDS
GCTATGTTCAATTTCCACAG+AGG 0.680463 3_2:+24821994 Msa0400420:CDS
AGTACTGACGAAAATGTCAA+CGG 0.685284 3_2:-24820431 None:intergenic
TCTTGCTGTTGACTACCCAG+TGG 0.690315 3_2:+24820507 Msa0400420:CDS
GGTCCCAAATCTGAGATGTG+TGG 0.691197 3_2:+24826601 Msa0400420:CDS
CTTGTTAGTCAAGAGACAGA+CGG 0.691630 3_2:-24824959 None:intergenic
TCCAGAAACTCTTCTCAAGG+AGG 0.693847 3_2:+24823389 Msa0400420:CDS
ACTCGATACAATAAGCACAA+AGG 0.699220 3_2:+24818167 Msa0400420:CDS
TCTACACTTATGGAAAATGG+TGG 0.703914 3_2:+24823348 Msa0400420:CDS
TTGAACCACGAGCACCTGAG+TGG 0.711643 3_2:+24820644 Msa0400420:CDS
GGTAGTGCAAGAAAATGACA+AGG 0.712905 3_2:-24819854 None:intergenic
AACAGCGGCTACCAATCATG+GGG 0.716067 3_2:+24826397 Msa0400420:CDS
TGATGCAAGATGGTACACCT+TGG 0.731034 3_2:+24820963 Msa0400420:CDS
GAACCGAACGCCAACCATCG+TGG 0.731065 3_2:+24826501 Msa0400420:CDS
AATGGACCAAACAACCACGA+TGG 0.733727 3_2:-24826515 None:intergenic
GGAGATCGTGAAGAGGATGG+TGG 0.741736 3_2:+24818783 Msa0400420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTATAAAAAATATACTAA+TGG - chr3_2:24817059-24817078 None:intergenic 10.0%
!!! ATTTATTTAATAGTTAGTTT+CGG + chr3_2:24820113-24820132 Msa0400420:intron 10.0%
!!! AAATGTATTTTGTAATTAAA+CGG + chr3_2:24821779-24821798 Msa0400420:intron 10.0%
!! TAAAAAACTACAAAAAATTT+CGG - chr3_2:24822398-24822417 None:intergenic 10.0%
!!! ATTTTCAATATATTGTTTTA+TGG + chr3_2:24825397-24825416 Msa0400420:intron 10.0%
!!! TTAGAATCAAATTATTTTTA+AGG + chr3_2:24826802-24826821 Msa0400420:three_prime_UTR 10.0%
!!! ATTTATGCTTTTATGATAAT+TGG + chr3_2:24817377-24817396 Msa0400420:intron 15.0%
!!! TTTATGCTTTTATGATAATT+GGG + chr3_2:24817378-24817397 Msa0400420:intron 15.0%
!!! TTGTTTTGTTTATGTTTAAT+TGG + chr3_2:24817495-24817514 Msa0400420:intron 15.0%
!!! GTTTTTAATTTATTCTAGTT+TGG + chr3_2:24818517-24818536 Msa0400420:intron 15.0%
!! TTACTAGTTATATTTGAAAA+TGG - chr3_2:24818719-24818738 None:intergenic 15.0%
!! CTTATAATATAGCAAATAAA+AGG - chr3_2:24820051-24820070 None:intergenic 15.0%
!!! CTTTTATTTGCTATATTATA+AGG + chr3_2:24820049-24820068 Msa0400420:intron 15.0%
!! GAAACTAACTATTAAATAAA+TGG - chr3_2:24820114-24820133 None:intergenic 15.0%
!!! ACTTTATTAATTTGTCTTTT+TGG + chr3_2:24821032-24821051 Msa0400420:intron 15.0%
!!! GAGTTTATTAAATTTAAGTT+AGG + chr3_2:24821306-24821325 Msa0400420:intron 15.0%
!! TCAAAAATTGTAAAAGAAAA+TGG - chr3_2:24821612-24821631 None:intergenic 15.0%
!!! AATGTATTTTGTAATTAAAC+GGG + chr3_2:24821780-24821799 Msa0400420:intron 15.0%
!!! TCTTTTAAAAAAAATAGAGA+AGG + chr3_2:24822817-24822836 Msa0400420:intron 15.0%
!!! CTTTTAAAAAAAATAGAGAA+GGG + chr3_2:24822818-24822837 Msa0400420:intron 15.0%
!!! TTTTAAAAAAAATAGAGAAG+GGG + chr3_2:24822819-24822838 Msa0400420:intron 15.0%
!!! CATATTTAAGTTTAATTCAT+TGG - chr3_2:24823584-24823603 None:intergenic 15.0%
!! CAATGAATTAAACTTAAATA+TGG + chr3_2:24823582-24823601 Msa0400420:intron 15.0%
!! AATTAAACTTAAATATGGAA+TGG + chr3_2:24823587-24823606 Msa0400420:intron 15.0%
!! ATTAAACTTAAATATGGAAT+GGG + chr3_2:24823588-24823607 Msa0400420:intron 15.0%
!! ATTTCTGTATTATATATCAT+GGG + chr3_2:24824528-24824547 Msa0400420:intron 15.0%
!! ATGATTATCTTCAAATAATT+GGG - chr3_2:24824605-24824624 None:intergenic 15.0%
!! AATGATTATCTTCAAATAAT+TGG - chr3_2:24824606-24824625 None:intergenic 15.0%
!! AATTAAAAGAATTAACATGA+CGG - chr3_2:24825069-24825088 None:intergenic 15.0%
!! TTAATCTTGAGTTATGATAA+AGG + chr3_2:24817457-24817476 Msa0400420:intron 20.0%
!! TAATCTTGAGTTATGATAAA+GGG + chr3_2:24817458-24817477 Msa0400420:intron 20.0%
!! CATAAACAAAACAAAAACAT+GGG - chr3_2:24817489-24817508 None:intergenic 20.0%
!! ACATAAACAAAACAAAAACA+TGG - chr3_2:24817490-24817509 None:intergenic 20.0%
!! GTTTAATTGGTTAAATTTCA+TGG + chr3_2:24817508-24817527 Msa0400420:intron 20.0%
!!! TTTCATATTGGATCTTTTAT+AGG + chr3_2:24818216-24818235 Msa0400420:intron 20.0%
!!! ACTGAGTTTGATTTATTAAA+GGG - chr3_2:24818276-24818295 None:intergenic 20.0%
!!! TTAATTTATTCTAGTTTGGT+TGG + chr3_2:24818521-24818540 Msa0400420:intron 20.0%
!!! CTAATCATTTAAATGGTTTT+AGG - chr3_2:24818568-24818587 None:intergenic 20.0%
!! CAATGATCTAATCATTTAAA+TGG - chr3_2:24818575-24818594 None:intergenic 20.0%
!! ATTTCATTGATGAAACAAAA+TGG - chr3_2:24818621-24818640 None:intergenic 20.0%
!! GTTATATTTGAAAATGGTAA+AGG - chr3_2:24818713-24818732 None:intergenic 20.0%
!! ATGGAAACAATATTATATAG+AGG - chr3_2:24819006-24819025 None:intergenic 20.0%
!! TATTGTTCAAATTGATACTA+TGG - chr3_2:24819025-24819044 None:intergenic 20.0%
!! CATTTAATTCAAAATCTGTT+GGG - chr3_2:24819051-24819070 None:intergenic 20.0%
!! ACATTTAATTCAAAATCTGT+TGG - chr3_2:24819052-24819071 None:intergenic 20.0%
!!! AATGCATATCTTTTGTTTTT+AGG + chr3_2:24819705-24819724 Msa0400420:intron 20.0%
!! CAATATTAAAAATACTCGTA+AGG - chr3_2:24820199-24820218 None:intergenic 20.0%
!! GTGCATTATAAAATTTATGA+AGG - chr3_2:24820281-24820300 None:intergenic 20.0%
!!! TTATATTTTTTCTTCTGTCT+TGG + chr3_2:24820781-24820800 Msa0400420:intron 20.0%
!!! TATTAATTTGTCTTTTTGGT+TGG + chr3_2:24821036-24821055 Msa0400420:intron 20.0%
!! TCTAAAAATTTAATCCATCT+AGG - chr3_2:24821147-24821166 None:intergenic 20.0%
!!! TAGATGGATTAAATTTTTAG+AGG + chr3_2:24821146-24821165 Msa0400420:intron 20.0%
!!! AGATGGATTAAATTTTTAGA+GGG + chr3_2:24821147-24821166 Msa0400420:intron 20.0%
!!! TAAGATTTCAGAATTTTCTA+TGG - chr3_2:24821520-24821539 None:intergenic 20.0%
!!! ATAGAAAATTCTGAAATCTT+AGG + chr3_2:24821519-24821538 Msa0400420:intron 20.0%
!!! TAGAAAATTCTGAAATCTTA+GGG + chr3_2:24821520-24821539 Msa0400420:intron 20.0%
!! AAAATACAATTTCAGAAACA+AGG - chr3_2:24821685-24821704 None:intergenic 20.0%
!!! TTCATTTTAAATTGCTAACA+AGG - chr3_2:24821742-24821761 None:intergenic 20.0%
!!! ATATTCAACTTTTTGAAGAA+CGG + chr3_2:24822139-24822158 Msa0400420:intron 20.0%
!! TAGATGATTCATTACAATAA+GGG - chr3_2:24822170-24822189 None:intergenic 20.0%
!! ATAGATGATTCATTACAATA+AGG - chr3_2:24822171-24822190 None:intergenic 20.0%
!!! AAAATGAATTTTATGCTATC+AGG + chr3_2:24822330-24822349 Msa0400420:intron 20.0%
!! TTTAGAAATGTTAAGATGTT+AGG + chr3_2:24822414-24822433 Msa0400420:intron 20.0%
!! TTAGAAATGTTAAGATGTTA+GGG + chr3_2:24822415-24822434 Msa0400420:intron 20.0%
!! TTTAAAAAAAATAGAGAAGG+GGG + chr3_2:24822820-24822839 Msa0400420:intron 20.0%
!!! AAGTGGCAAAAATATTTTAA+CGG - chr3_2:24822991-24823010 None:intergenic 20.0%
!! CAAAGAATTTCTATATAATC+AGG - chr3_2:24823166-24823185 None:intergenic 20.0%
!!! TTAACTCAACCATTTTATTT+AGG + chr3_2:24823240-24823259 Msa0400420:intron 20.0%
!! TTATGAAGATAAATCAGAAT+GGG + chr3_2:24823434-24823453 Msa0400420:CDS 20.0%
!!! TAAAAAAGCATCAAAAGTAA+TGG - chr3_2:24823491-24823510 None:intergenic 20.0%
!! GTAAAATATCCATATTATCA+AGG - chr3_2:24823623-24823642 None:intergenic 20.0%
!! ACATTTAATACTTCATAAGA+TGG + chr3_2:24823907-24823926 Msa0400420:intron 20.0%
!! TATAATTAGTGACTATTAAG+AGG - chr3_2:24824406-24824425 None:intergenic 20.0%
!!! AAGCTGATTTAAATTTAGTA+TGG + chr3_2:24824461-24824480 Msa0400420:intron 20.0%
!! CATTTCTGTATTATATATCA+TGG + chr3_2:24824527-24824546 Msa0400420:intron 20.0%
!! TTTCTGTATTATATATCATG+GGG + chr3_2:24824529-24824548 Msa0400420:intron 20.0%
!! TATAACTAAAAATCAAAGAG+TGG + chr3_2:24825125-24825144 Msa0400420:intron 20.0%
!! TCTATATTTAGATAAACAAG+TGG - chr3_2:24825375-24825394 None:intergenic 20.0%
!!! TTGTTGGTTAAGAATTATTT+TGG + chr3_2:24825515-24825534 Msa0400420:intron 20.0%
!! ATTAGACATTTCAATTTACA+AGG - chr3_2:24825656-24825675 None:intergenic 20.0%
!! TTAAATATGTTACCAGAAAA+AGG - chr3_2:24825735-24825754 None:intergenic 20.0%
!!! CAGATTAGTAAGAATTATTT+TGG + chr3_2:24825782-24825801 Msa0400420:intron 20.0%
!! ATTAGACATTTCAATTTACA+AGG - chr3_2:24825656-24825675 None:intergenic 20.0%
!! TTAAATATGTTACCAGAAAA+AGG - chr3_2:24825735-24825754 None:intergenic 20.0%
!!! TAAACTTTTCTTTGCATTTT+GGG + chr3_2:24826432-24826451 Msa0400420:CDS 20.0%
!!! ATCCATTTTTTCACTTTTAT+GGG + chr3_2:24826546-24826565 Msa0400420:CDS 20.0%
!!! TTACAGATTTTCTTCTTATT+TGG + chr3_2:24826941-24826960 Msa0400420:three_prime_UTR 20.0%
! ATTAATAAAAGAGACTTGGA+TGG - chr3_2:24817243-24817262 None:intergenic 25.0%
! GAAGATTAATAAAAGAGACT+TGG - chr3_2:24817247-24817266 None:intergenic 25.0%
! TGGTTAAATTTCATGGTTTA+AGG + chr3_2:24817515-24817534 Msa0400420:intron 25.0%
! ATCATCAACAATTTGCAAAA+TGG - chr3_2:24817605-24817624 None:intergenic 25.0%
!! TAGTTTAAGAAGTTGTTGTT+TGG + chr3_2:24817910-24817929 Msa0400420:intron 25.0%
!!! AGTTTAAGAAGTTGTTGTTT+GGG + chr3_2:24817911-24817930 Msa0400420:intron 25.0%
! ATAAGCACAAAGGTAAAATA+TGG + chr3_2:24818177-24818196 Msa0400420:intron 25.0%
! TAAGCACAAAGGTAAAATAT+GGG + chr3_2:24818178-24818197 Msa0400420:intron 25.0%
! AAATCTGTTGTCTTTCATAT+TGG + chr3_2:24818204-24818223 Msa0400420:intron 25.0%
!! GACTGAGTTTGATTTATTAA+AGG - chr3_2:24818277-24818296 None:intergenic 25.0%
!! ATTGATAATATTCATCTTGC+AGG - chr3_2:24818650-24818669 None:intergenic 25.0%
!! ACGCTTATTTAATTGATTTC+AGG + chr3_2:24818744-24818763 Msa0400420:intron 25.0%
! GAAACTTCCTTATCATAATT+TGG - chr3_2:24818930-24818949 None:intergenic 25.0%
!!! TGTTATCTGATATTGATTTG+AGG + chr3_2:24819261-24819280 Msa0400420:intron 25.0%
! TACAACATATTTATCAGTCA+CGG - chr3_2:24819626-24819645 None:intergenic 25.0%
!!! CTTAACACTTTGTTTTGATT+AGG + chr3_2:24819736-24819755 Msa0400420:intron 25.0%
! TATCAGTTATATGTGAAGTT+TGG + chr3_2:24819919-24819938 Msa0400420:CDS 25.0%
! GAGTTAAATGAGAAAGTTTA+TGG - chr3_2:24820259-24820278 None:intergenic 25.0%
!! AAGAATTGATAGTACAGTAT+TGG - chr3_2:24820491-24820510 None:intergenic 25.0%
! ATTTCATATTTCTTGCAGAA+AGG - chr3_2:24820625-24820644 None:intergenic 25.0%
! AATTGACTACTTGAAAGATA+AGG + chr3_2:24820681-24820700 Msa0400420:CDS 25.0%
! GAATTCAAAATTCGTATCAA+TGG + chr3_2:24820899-24820918 Msa0400420:CDS 25.0%
! AATTAATAAAGTGAACTACC+TGG - chr3_2:24821024-24821043 None:intergenic 25.0%
!!! GATGGATTAAATTTTTAGAG+GGG + chr3_2:24821148-24821167 Msa0400420:intron 25.0%
!! AAATTTAAGTTAGGACTTTG+AGG + chr3_2:24821315-24821334 Msa0400420:intron 25.0%
! ATTGTAAAAGAAAATGGTGA+AGG - chr3_2:24821606-24821625 None:intergenic 25.0%
!! GAAACAAGGAAACATTATTT+TGG - chr3_2:24821671-24821690 None:intergenic 25.0%
! CAATCAAGATTCAATAAGAA+AGG - chr3_2:24821894-24821913 None:intergenic 25.0%
! AAAGAAAACAGTATTACGAT+TGG - chr3_2:24822051-24822070 None:intergenic 25.0%
!! TCTGATTTCTGTTAAGTTTT+AGG + chr3_2:24822097-24822116 Msa0400420:intron 25.0%
!!! TATTCAACTTTTTGAAGAAC+GGG + chr3_2:24822140-24822159 Msa0400420:intron 25.0%
! AGATGATTCATTACAATAAG+GGG - chr3_2:24822169-24822188 None:intergenic 25.0%
! TAGAAATGTTAAGATGTTAG+GGG + chr3_2:24822416-24822435 Msa0400420:intron 25.0%
! AAGTTTATCTGTACAAAAAG+AGG - chr3_2:24822492-24822511 None:intergenic 25.0%
! TTCAATAGAACTGCTTTATA+TGG + chr3_2:24822564-24822583 Msa0400420:CDS 25.0%
! AGCAGGTAAAAATATTTAAC+AGG - chr3_2:24822778-24822797 None:intergenic 25.0%
!!! AGTGGCAAAAATATTTTAAC+GGG - chr3_2:24822990-24823009 None:intergenic 25.0%
! TCTATATAATCAGGAAAATG+AGG - chr3_2:24823157-24823176 None:intergenic 25.0%
! GTTATGAAGATAAATCAGAA+TGG + chr3_2:24823433-24823452 Msa0400420:CDS 25.0%
! TATGAAGATAAATCAGAATG+GGG + chr3_2:24823435-24823454 Msa0400420:CDS 25.0%
! CTCTTAATTCACAAATATGT+TGG - chr3_2:24823552-24823571 None:intergenic 25.0%
!! AGTTTAATTCATTGGACTTT+TGG - chr3_2:24823576-24823595 None:intergenic 25.0%
!! CTAGATAATCCTTGATAATA+TGG + chr3_2:24823611-24823630 Msa0400420:intron 25.0%
! TATCAACTCTAGTATAAAGA+CGG - chr3_2:24823814-24823833 None:intergenic 25.0%
!!! TCTTTATACTAGAGTTGATA+GGG + chr3_2:24823814-24823833 Msa0400420:intron 25.0%
!!! ATTTTGAAAGCTAGTTTTGT+AGG + chr3_2:24824123-24824142 Msa0400420:intron 25.0%
!!! TTTTGAAAGCTAGTTTTGTA+GGG + chr3_2:24824124-24824143 Msa0400420:intron 25.0%
! TGAAAATTCCTAAAATGAGT+CGG - chr3_2:24824161-24824180 None:intergenic 25.0%
! TAAGTCAATAAGAAAAAAGC+GGG - chr3_2:24824225-24824244 None:intergenic 25.0%
! GTAAGTCAATAAGAAAAAAG+CGG - chr3_2:24824226-24824245 None:intergenic 25.0%
!!! CTTATTGACTTACTAAATAG+AGG + chr3_2:24824233-24824252 Msa0400420:intron 25.0%
! AACAATTGAGTTTCTTCTAA+TGG - chr3_2:24824286-24824305 None:intergenic 25.0%
! AGTCACTAATTATAGACTTA+TGG + chr3_2:24824412-24824431 Msa0400420:intron 25.0%
! AAATGCTAATGCATAAAGAA+TGG - chr3_2:24824512-24824531 None:intergenic 25.0%
! TTCTGTATTATATATCATGG+GGG + chr3_2:24824530-24824549 Msa0400420:intron 25.0%
! TAACAAGTTTATTATTCCAC+AGG + chr3_2:24824975-24824994 Msa0400420:CDS 25.0%
!!! AACCATTCGTCAATTTTTTT+TGG + chr3_2:24825165-24825184 Msa0400420:intron 25.0%
! AACCAAAAAAAATTGACGAA+TGG - chr3_2:24825170-24825189 None:intergenic 25.0%
!!! TTCGTCAATTTTTTTTGGTT+AGG + chr3_2:24825170-24825189 Msa0400420:intron 25.0%
! TCAAATTATCATCATGTTGA+CGG + chr3_2:24825338-24825357 Msa0400420:intron 25.0%
!!! TGGTTAGTTTATCCTAAAAT+TGG + chr3_2:24825535-24825554 Msa0400420:intron 25.0%
!!! TGGTTAGTTTATCCTAAAAT+TGG + chr3_2:24825535-24825554 Msa0400420:intron 25.0%
! TTAGTAACATTGCAAGTATA+TGG + chr3_2:24826053-24826072 Msa0400420:CDS 25.0%
!!! AATGAACAATTTTGGGTTAT+TGG + chr3_2:24826160-24826179 Msa0400420:CDS 25.0%
!! TTTAAACATGTATAGTTCTG+CGG - chr3_2:24826296-24826315 None:intergenic 25.0%
! CAGAACTATACATGTTTAAA+TGG + chr3_2:24826296-24826315 Msa0400420:CDS 25.0%
! TTTATAATGAGAAGAGTTGT+TGG - chr3_2:24826340-24826359 None:intergenic 25.0%
!! GTAAACTTTTCTTTGCATTT+TGG + chr3_2:24826431-24826450 Msa0400420:CDS 25.0%
!!! CATCCATTTTTTCACTTTTA+TGG + chr3_2:24826545-24826564 Msa0400420:CDS 25.0%
! AACCCATAAAAGTGAAAAAA+TGG - chr3_2:24826551-24826570 None:intergenic 25.0%
!!! ATTGCAATTCTTTTGTTTAC+AGG + chr3_2:24826698-24826717 Msa0400420:three_prime_UTR 25.0%
! ATTAAATTATGTGCAGTTGA+TGG + chr3_2:24826756-24826775 Msa0400420:three_prime_UTR 25.0%
! CTCTACACATTCAAAGTTTT+TGG - chr3_2:24817126-24817145 None:intergenic 30.0%
TATTCATTCCTTGCTTCAAT+TGG + chr3_2:24817285-24817304 Msa0400420:five_prime_UTR 30.0%
ATTCATTCCTTGCTTCAATT+GGG + chr3_2:24817286-24817305 Msa0400420:five_prime_UTR 30.0%
!! AAATTGTTGATGATGCTTGT+TGG + chr3_2:24817611-24817630 Msa0400420:intron 30.0%
!! ATCTGAGAAGTTGATTTTGT+TGG + chr3_2:24817704-24817723 Msa0400420:five_prime_UTR 30.0%
!! TCTGAGAAGTTGATTTTGTT+GGG + chr3_2:24817705-24817724 Msa0400420:five_prime_UTR 30.0%
!! AAGTTGATTTTGTTGGGAAT+TGG + chr3_2:24817711-24817730 Msa0400420:five_prime_UTR 30.0%
TGATGTTTAGTGACAAATTG+TGG + chr3_2:24817951-24817970 Msa0400420:intron 30.0%
CAGATTTGTGGTGATAATAT+CGG + chr3_2:24818029-24818048 Msa0400420:CDS 30.0%
TTCCTTTCATACTCATAACA+CGG - chr3_2:24818116-24818135 None:intergenic 30.0%
TATGAGTATGAAAGGAAAGA+TGG + chr3_2:24818119-24818138 Msa0400420:CDS 30.0%
ATGAGTATGAAAGGAAAGAT+GGG + chr3_2:24818120-24818139 Msa0400420:CDS 30.0%
TTTGCTTGAGTAAAAGGTAA+TGG - chr3_2:24818380-24818399 None:intergenic 30.0%
AGTAACTTTGCTTGAGTAAA+AGG - chr3_2:24818386-24818405 None:intergenic 30.0%
ATAGATCAAGCAGTTTGAAT+GGG - chr3_2:24818453-24818472 None:intergenic 30.0%
TATAGATCAAGCAGTTTGAA+TGG - chr3_2:24818454-24818473 None:intergenic 30.0%
!! CATGATTAGTTCTATGACTT+AGG + chr3_2:24818477-24818496 Msa0400420:intron 30.0%
TGAATTGTACTTGAAGTCAT+TGG - chr3_2:24818823-24818842 None:intergenic 30.0%
TGATGCTCCAAATTATGATA+AGG + chr3_2:24818920-24818939 Msa0400420:CDS 30.0%
TATCTTCTATTTCAGACATC+TGG + chr3_2:24819081-24819100 Msa0400420:intron 30.0%
TTAAGATCAGACGAATATGA+TGG - chr3_2:24819186-24819205 None:intergenic 30.0%
!! ATATAGAAGTACTCACAACA+AGG - chr3_2:24819485-24819504 None:intergenic 30.0%
AAACAGCACACATTCTTATT+GGG - chr3_2:24819510-24819529 None:intergenic 30.0%
TATGGATTTATCCTAGAAGA+TGG - chr3_2:24819804-24819823 None:intergenic 30.0%
AAATCAATTATGGCTCAGTT+TGG - chr3_2:24820367-24820386 None:intergenic 30.0%
TCTGCAACTCAAATCAATTA+TGG - chr3_2:24820377-24820396 None:intergenic 30.0%
!! ATTTGAGTTGCAGATATGAT+CGG + chr3_2:24820383-24820402 Msa0400420:intron 30.0%
ATCAGAATTTGCAAGGAAAT+GGG + chr3_2:24820597-24820616 Msa0400420:CDS 30.0%
AAAAGTTTCATCTACCTAGA+TGG + chr3_2:24821130-24821149 Msa0400420:intron 30.0%
GATAGGCAATAATATTACCT+AGG - chr3_2:24821178-24821197 None:intergenic 30.0%
! TGTTTACGCTTGTGATTTTA+GGG + chr3_2:24821206-24821225 Msa0400420:intron 30.0%
TTAAATTGCTAACAAGGAGA+TGG - chr3_2:24821736-24821755 None:intergenic 30.0%
!!! CAAACATTTTTTCCAAGGTT+GGG - chr3_2:24821975-24821994 None:intergenic 30.0%
!!! CATAGCAAACATTTTTTCCA+AGG - chr3_2:24821980-24821999 None:intergenic 30.0%
CTTTGATGTAAGTATCTTAC+AGG + chr3_2:24822067-24822086 Msa0400420:intron 30.0%
! AAAATTTCGGAAGTGTACTT+CGG - chr3_2:24822385-24822404 None:intergenic 30.0%
TTTGTACAGATAAACTTGAG+AGG + chr3_2:24822495-24822514 Msa0400420:intron 30.0%
TTGTACAGATAAACTTGAGA+GGG + chr3_2:24822496-24822515 Msa0400420:intron 30.0%
! TTTTTATGCTTGGGTTTGAT+AGG - chr3_2:24822600-24822619 None:intergenic 30.0%
TATATCCTCTAGACTAAAGA+CGG - chr3_2:24822733-24822752 None:intergenic 30.0%
!! TTTTTGCCACTTGTATTTGT+AGG + chr3_2:24822999-24823018 Msa0400420:intron 30.0%
AATCATCCTACAAATACAAG+TGG - chr3_2:24823008-24823027 None:intergenic 30.0%
!! GCATAACTTTCTAGAATTTG+TGG + chr3_2:24823075-24823094 Msa0400420:intron 30.0%
TATAATCAGGAAAATGAGGA+CGG - chr3_2:24823153-24823172 None:intergenic 30.0%
AAATGGTTGAGTTAAGAAAC+AGG - chr3_2:24823235-24823254 None:intergenic 30.0%
AATCCAGCACCTAAATAAAA+TGG - chr3_2:24823252-24823271 None:intergenic 30.0%
CATAAAGATACACATACACT+TGG - chr3_2:24823656-24823675 None:intergenic 30.0%
GAATTACAGAATCAGTAGAA+TGG + chr3_2:24823760-24823779 Msa0400420:intron 30.0%
! GTCTTTATACTAGAGTTGAT+AGG + chr3_2:24823813-24823832 Msa0400420:intron 30.0%
AGTCATGTCTAATCAAAAGT+AGG - chr3_2:24823864-24823883 None:intergenic 30.0%
!! ACTTTTGATTAGACATGACT+TGG + chr3_2:24823864-24823883 Msa0400420:intron 30.0%
!!! ACTTCATAAGATGGTTTTGT+AGG + chr3_2:24823916-24823935 Msa0400420:intron 30.0%
CAGATACCATCCTAAAATTT+GGG - chr3_2:24823954-24823973 None:intergenic 30.0%
TCAGATACCATCCTAAAATT+TGG - chr3_2:24823955-24823974 None:intergenic 30.0%
TCACTTATAAACAGTTCTTC+AGG - chr3_2:24824091-24824110 None:intergenic 30.0%
! AGTTATATCCGACTCATTTT+AGG + chr3_2:24824150-24824169 Msa0400420:intron 30.0%
AATAAGAAAAAAGCGGGAAA+AGG - chr3_2:24824219-24824238 None:intergenic 30.0%
ATTGAGTTTCTTCTAATGGA+TGG - chr3_2:24824282-24824301 None:intergenic 30.0%
ACAAAACAAAATGGTTATGC+AGG - chr3_2:24824377-24824396 None:intergenic 30.0%
! AGGAGTACAACAAAACAAAA+TGG - chr3_2:24824386-24824405 None:intergenic 30.0%
TTGTCTTATATTCCACAGAT+TGG + chr3_2:24824628-24824647 Msa0400420:intron 30.0%
TGTCTTATATTCCACAGATT+GGG + chr3_2:24824629-24824648 Msa0400420:intron 30.0%
TAAGGTACAATACATGAGAA+GGG - chr3_2:24824935-24824954 None:intergenic 30.0%
GGCAAATGTTAATAAGTTAG+TGG + chr3_2:24825191-24825210 Msa0400420:intron 30.0%
!! AAAGAATTTTAAGGAGGTTC+GGG - chr3_2:24825235-24825254 None:intergenic 30.0%
!! GAAAGAATTTTAAGGAGGTT+CGG - chr3_2:24825236-24825255 None:intergenic 30.0%
!! ACATCGAAAGAATTTTAAGG+AGG - chr3_2:24825241-24825260 None:intergenic 30.0%
! ACAAAGAAAGTCTTTTATGG+AGG - chr3_2:24825499-24825518 None:intergenic 30.0%
! CCAACAAAGAAAGTCTTTTA+TGG - chr3_2:24825502-24825521 None:intergenic 30.0%
CCATAAAAGACTTTCTTTGT+TGG + chr3_2:24825499-24825518 Msa0400420:intron 30.0%
! GTACGTGTATTTCCAATTTT+AGG - chr3_2:24825550-24825569 None:intergenic 30.0%
AAATTGGAAATACACGTACA+AGG + chr3_2:24825551-24825570 Msa0400420:intron 30.0%
! ACACAAGATCAAATTTTGAG+AGG - chr3_2:24825698-24825717 None:intergenic 30.0%
AATCTGCAAGTGAAATGAAA+GGG - chr3_2:24825768-24825787 None:intergenic 30.0%
TAATCTGCAAGTGAAATGAA+AGG - chr3_2:24825769-24825788 None:intergenic 30.0%
! GTACGTGTATTTCCAATTTT+AGG - chr3_2:24825550-24825569 None:intergenic 30.0%
AAATTGGAAATACACGTACA+AGG + chr3_2:24825551-24825570 Msa0400420:intron 30.0%
! ACACAAGATCAAATTTTGAG+AGG - chr3_2:24825698-24825717 None:intergenic 30.0%
AATCTGCAAGTGAAATGAAA+GGG - chr3_2:24825768-24825787 None:intergenic 30.0%
TAATCTGCAAGTGAAATGAA+AGG - chr3_2:24825769-24825788 None:intergenic 30.0%
! GTGGAGAAATGAACAATTTT+GGG + chr3_2:24826153-24826172 Msa0400420:CDS 30.0%
CTTCTCATTATAAACCTTGT+CGG + chr3_2:24826346-24826365 Msa0400420:CDS 30.0%
AAGAAAAGTTTACCAAAGAG+TGG - chr3_2:24826424-24826443 None:intergenic 30.0%
AAAAATGGATGCAAGAAGAA+TGG - chr3_2:24826536-24826555 None:intergenic 30.0%
!!! TGAACATATCTCCCTTTTTT+TGG + chr3_2:24826847-24826866 Msa0400420:three_prime_UTR 30.0%
!!! GAACATATCTCCCTTTTTTT+GGG + chr3_2:24826848-24826867 Msa0400420:three_prime_UTR 30.0%
AATAGCTTCTCCCAAAAAAA+GGG - chr3_2:24826861-24826880 None:intergenic 30.0%
AAATAGCTTCTCCCAAAAAA+AGG - chr3_2:24826862-24826881 None:intergenic 30.0%
GTGTATACTACAAGAATGTT+CGG - chr3_2:24826909-24826928 None:intergenic 30.0%
! GACTCTTTTTCTCTTTCTGT+CGG + chr3_2:24817202-24817221 Msa0400420:five_prime_UTR 35.0%
TTTCTGTCGGTCAATTAGAT+TGG + chr3_2:24817215-24817234 Msa0400420:five_prime_UTR 35.0%
CTCTCAAGATCTTATCTTTG+AGG + chr3_2:24817321-24817340 Msa0400420:five_prime_UTR 35.0%
!! GCTCTTCTAAGATGCTAATA+AGG - chr3_2:24817799-24817818 None:intergenic 35.0%
!! TAAGAAGTTGTTGTTTGGGA+TGG + chr3_2:24817915-24817934 Msa0400420:intron 35.0%
CGATATTATCACCACAAATC+TGG - chr3_2:24818031-24818050 None:intergenic 35.0%
! AATATCGGTAGTGCTGTTAA+TGG + chr3_2:24818044-24818063 Msa0400420:CDS 35.0%
CAAACACCACAAGCAATAAA+CGG - chr3_2:24818074-24818093 None:intergenic 35.0%
ACTCGATACAATAAGCACAA+AGG + chr3_2:24818167-24818186 Msa0400420:CDS 35.0%
CAAACTCAGTCTTTCATTCT+TGG + chr3_2:24818286-24818305 Msa0400420:intron 35.0%
!! TTCTGCGATCTTTTGCTTTT+GGG - chr3_2:24818856-24818875 None:intergenic 35.0%
TTTCTCACAATCACATTCCT+CGG + chr3_2:24818946-24818965 Msa0400420:CDS 35.0%
! TGTGTATAGTTTGTGAGTGA+GGG - chr3_2:24819224-24819243 None:intergenic 35.0%
! ATGTGTATAGTTTGTGAGTG+AGG - chr3_2:24819225-24819244 None:intergenic 35.0%
GAAACAGCACACATTCTTAT+TGG - chr3_2:24819511-24819530 None:intergenic 35.0%
GAGTTTCATAACTGCTGAAA+AGG - chr3_2:24819590-24819609 None:intergenic 35.0%
AGGTTTCTATTCCATCTTCT+AGG + chr3_2:24819790-24819809 Msa0400420:CDS 35.0%
TAGGATAAATCCATACCGTA+TGG + chr3_2:24819809-24819828 Msa0400420:CDS 35.0%
AGAATAATGACCATACGGTA+TGG - chr3_2:24819822-24819841 None:intergenic 35.0%
!!! AAGTTTGGTTTGCCTTTTCT+TGG + chr3_2:24819934-24819953 Msa0400420:CDS 35.0%
! GTTTGCCTTTTCTTGGATAT+TGG + chr3_2:24819941-24819960 Msa0400420:CDS 35.0%
CTGATCCAATATCCAAGAAA+AGG - chr3_2:24819949-24819968 None:intergenic 35.0%
AAAGGAGAGTCAAAACTCAA+GGG - chr3_2:24820033-24820052 None:intergenic 35.0%
AAAAGGAGAGTCAAAACTCA+AGG - chr3_2:24820034-24820053 None:intergenic 35.0%
!! TTTGAGTTGCAGATATGATC+GGG + chr3_2:24820384-24820403 Msa0400420:intron 35.0%
!! AGTACTGACGAAAATGTCAA+CGG - chr3_2:24820434-24820453 None:intergenic 35.0%
TCATGTTATGTCTCTGATGA+TGG + chr3_2:24820538-24820557 Msa0400420:CDS 35.0%
CATCAGAATTTGCAAGGAAA+TGG + chr3_2:24820596-24820615 Msa0400420:CDS 35.0%
GATCTTTGACAAATGATGCT+TGG - chr3_2:24820708-24820727 None:intergenic 35.0%
GTAAAGAAGATTGACAGACA+TGG + chr3_2:24820742-24820761 Msa0400420:intron 35.0%
! CTAGGTAGATGAAACTTTTG+TGG - chr3_2:24821129-24821148 None:intergenic 35.0%
! GTGTTTACGCTTGTGATTTT+AGG + chr3_2:24821205-24821224 Msa0400420:intron 35.0%
CTTGTTAACTATCACCACAT+GGG + chr3_2:24821706-24821725 Msa0400420:intron 35.0%
ACACGTGTAGAGTAAAGTAA+GGG - chr3_2:24821806-24821825 None:intergenic 35.0%
TACACGTGTAGAGTAAAGTA+AGG - chr3_2:24821807-24821826 None:intergenic 35.0%
ATATACACGAATGGTTAGAC+AGG - chr3_2:24821830-24821849 None:intergenic 35.0%
GAGACAGAAATATACACGAA+TGG - chr3_2:24821839-24821858 None:intergenic 35.0%
! TTCGTGTATATTTCTGTCTC+AGG + chr3_2:24821839-24821858 Msa0400420:intron 35.0%
! GGAAGCTATGTGTTTTATGA+TGG + chr3_2:24821947-24821966 Msa0400420:CDS 35.0%
!!! GCAAACATTTTTTCCAAGGT+TGG - chr3_2:24821976-24821995 None:intergenic 35.0%
!! AGAGGTTTGATGGTATTGAT+AGG + chr3_2:24822012-24822031 Msa0400420:CDS 35.0%
! GGAGGTGTATAAAATTCATC+CGG - chr3_2:24822280-24822299 None:intergenic 35.0%
GTACACTTCTGGACAAAATT+TGG + chr3_2:24822355-24822374 Msa0400420:intron 35.0%
TGTACAAAAAGAGGCAAGAT+GGG - chr3_2:24822483-24822502 None:intergenic 35.0%
! AGACTAGGCTTTTTATGCTT+GGG - chr3_2:24822609-24822628 None:intergenic 35.0%
! AAGACTAGGCTTTTTATGCT+TGG - chr3_2:24822610-24822629 None:intergenic 35.0%
CAAAGTGAAGAAACAAGACT+AGG - chr3_2:24822624-24822643 None:intergenic 35.0%
!! AGTCTTGTTTCTTCACTTTG+CGG + chr3_2:24822624-24822643 Msa0400420:CDS 35.0%
ATATCCTCTAGACTAAAGAC+GGG - chr3_2:24822732-24822751 None:intergenic 35.0%
AGTCTAGAGGATATAGAAGA+AGG + chr3_2:24822738-24822757 Msa0400420:CDS 35.0%
GTCTAGAGGATATAGAAGAA+GGG + chr3_2:24822739-24822758 Msa0400420:CDS 35.0%
TCTAGAGGATATAGAAGAAG+GGG + chr3_2:24822740-24822759 Msa0400420:CDS 35.0%
GTGAGATTCATATAGAAAGC+AGG - chr3_2:24822795-24822814 None:intergenic 35.0%
AACAGAGTTCAAATACCTTC+GGG - chr3_2:24822896-24822915 None:intergenic 35.0%
GAACAGAGTTCAAATACCTT+CGG - chr3_2:24822897-24822916 None:intergenic 35.0%
TATTTGAACTCTGTTCCTTG+AGG + chr3_2:24822901-24822920 Msa0400420:intron 35.0%
AATGAACCTTGTCCATTAGA+TGG - chr3_2:24822957-24822976 None:intergenic 35.0%
! TGCGCTATACTCTTCTTTTT+AGG - chr3_2:24823058-24823077 None:intergenic 35.0%
!! CAACCATTTTATTTAGGTGC+TGG + chr3_2:24823246-24823265 Msa0400420:intron 35.0%
! TTTTGTTGCCTCTACACTTA+TGG + chr3_2:24823338-24823357 Msa0400420:CDS 35.0%
! ACCATTTTCCATAAGTGTAG+AGG - chr3_2:24823349-24823368 None:intergenic 35.0%
TCTACACTTATGGAAAATGG+TGG + chr3_2:24823348-24823367 Msa0400420:CDS 35.0%
GCAATTCATGTTATCAGTTG+TGG + chr3_2:24823411-24823430 Msa0400420:CDS 35.0%
AACTGAGGTACAAAACAGAA+TGG + chr3_2:24823458-24823477 Msa0400420:intron 35.0%
GATTCAAGCCATACTTGAAA+TGG + chr3_2:24823675-24823694 Msa0400420:intron 35.0%
! GCATAGTTCCATTTCAAGTA+TGG - chr3_2:24823686-24823705 None:intergenic 35.0%
TACTTGAAATGGAACTATGC+TGG + chr3_2:24823686-24823705 Msa0400420:intron 35.0%
CAAAAGTAGGACTCAACAAA+AGG - chr3_2:24823851-24823870 None:intergenic 35.0%
!!! AAGATGGTTTTGTAGGTTTG+AGG + chr3_2:24823923-24823942 Msa0400420:intron 35.0%
! ACCATCCTAAAATTTGGGTT+GGG - chr3_2:24823949-24823968 None:intergenic 35.0%
TACCATCCTAAAATTTGGGT+TGG - chr3_2:24823950-24823969 None:intergenic 35.0%
GTGTGTTGAGAATCGTATAT+TGG + chr3_2:24824054-24824073 Msa0400420:intron 35.0%
ACTAAATAGAGGAAGAGATG+AGG + chr3_2:24824244-24824263 Msa0400420:intron 35.0%
CTAAATAGAGGAAGAGATGA+GGG + chr3_2:24824245-24824264 Msa0400420:intron 35.0%
! TTCTTCTAATGGATGGATCA+AGG - chr3_2:24824275-24824294 None:intergenic 35.0%
GTCACAGAAGATATTCTTAC+TGG + chr3_2:24824667-24824686 Msa0400420:CDS 35.0%
AATATATAGACCTCCAACCA+CGG - chr3_2:24824708-24824727 None:intergenic 35.0%
AAACGATCGGAAAGATTGAT+AGG - chr3_2:24824766-24824785 None:intergenic 35.0%
CAGTGGAAATTCTACTAAGT+CGG + chr3_2:24824815-24824834 Msa0400420:CDS 35.0%
! GTTATAGTGGAAGGTTAAAG+TGG + chr3_2:24824857-24824876 Msa0400420:CDS 35.0%
AAGGTACAATACATGAGAAG+GGG - chr3_2:24824934-24824953 None:intergenic 35.0%
GTAAGGTACAATACATGAGA+AGG - chr3_2:24824936-24824955 None:intergenic 35.0%
! TGTTCCTTGTAGTCTTGATT+TGG + chr3_2:24825036-24825055 Msa0400420:intron 35.0%
ATGTCCAAATCAAGACTACA+AGG - chr3_2:24825043-24825062 None:intergenic 35.0%
AATCATCCAGAATCACAGTT+AGG - chr3_2:24825103-24825122 None:intergenic 35.0%
!! AAGAATTTTAAGGAGGTTCG+GGG - chr3_2:24825234-24825253 None:intergenic 35.0%
! GGGACATCGAAAGAATTTTA+AGG - chr3_2:24825244-24825263 None:intergenic 35.0%
CAGTAGTGAAAGAAGCTTTA+GGG - chr3_2:24825609-24825628 None:intergenic 35.0%
TCAGTAGTGAAAGAAGCTTT+AGG - chr3_2:24825610-24825629 None:intergenic 35.0%
! AACAGCATTCTACCTTTTTC+TGG + chr3_2:24825720-24825739 Msa0400420:intron 35.0%
ATCTGCAAGTGAAATGAAAG+GGG - chr3_2:24825767-24825786 None:intergenic 35.0%
CAGTAGTGAAAGAAGCTTTA+GGG - chr3_2:24825609-24825628 None:intergenic 35.0%
TCAGTAGTGAAAGAAGCTTT+AGG - chr3_2:24825610-24825629 None:intergenic 35.0%
! AACAGCATTCTACCTTTTTC+TGG + chr3_2:24825720-24825739 Msa0400420:intron 35.0%
ATCTGCAAGTGAAATGAAAG+GGG - chr3_2:24825767-24825786 None:intergenic 35.0%
TTTCTTTCCATCTTTGCAAC+TGG + chr3_2:24826088-24826107 Msa0400420:CDS 35.0%
! GGTGGAGAAATGAACAATTT+TGG + chr3_2:24826152-24826171 Msa0400420:CDS 35.0%
!!! GAACAATTTTGGGTTATTGG+TGG + chr3_2:24826163-24826182 Msa0400420:CDS 35.0%
CAAGTACTTTGAGTAAACCT+TGG - chr3_2:24826216-24826235 None:intergenic 35.0%
!! ATCTTCATCTGAAGCTTTTG+AGG - chr3_2:24826266-24826285 None:intergenic 35.0%
TCAAAAGCTTCAGATGAAGA+TGG + chr3_2:24826265-24826284 Msa0400420:CDS 35.0%
ATAATGAGAAGAGTTGTTGG+TGG - chr3_2:24826337-24826356 None:intergenic 35.0%
ATTCCACACATCTCAGATTT+GGG - chr3_2:24826607-24826626 None:intergenic 35.0%
ATACAATCACAACAGTTGAG+TGG - chr3_2:24826680-24826699 None:intergenic 35.0%
AGAAGAACCCAATTGAAGCA+AGG - chr3_2:24817296-24817315 None:intergenic 40.0%
GCATCTTAGAAGAGCTAAGT+AGG + chr3_2:24817804-24817823 Msa0400420:five_prime_UTR 40.0%
AGCTAAGTAGGAGACTATGA+TGG + chr3_2:24817816-24817835 Msa0400420:exon 40.0%
TGGTGCTTCTTGTGATACTT+AGG + chr3_2:24817971-24817990 Msa0400420:intron 40.0%
! TGTATCGAGTTTTGCACTGT+GGG - chr3_2:24818157-24818176 None:intergenic 40.0%
! TTGTATCGAGTTTTGCACTG+TGG - chr3_2:24818158-24818177 None:intergenic 40.0%
! GGATCTTTTATAGGCATGTC+AGG + chr3_2:24818225-24818244 Msa0400420:intron 40.0%
GGAATCGAATCAATCGATGA+AGG + chr3_2:24818307-24818326 Msa0400420:intron 40.0%
GTAATGGCACAGATCAGTAT+TGG - chr3_2:24818364-24818383 None:intergenic 40.0%
AATTCTTGGAGATCGTGAAG+AGG + chr3_2:24818776-24818795 Msa0400420:CDS 40.0%
! GTTCTGCGATCTTTTGCTTT+TGG - chr3_2:24818857-24818876 None:intergenic 40.0%
! GTGTATAGTTTGTGAGTGAG+GGG - chr3_2:24819223-24819242 None:intergenic 40.0%
GCTTGGAAAGAAAGAGTTGA+TGG + chr3_2:24819346-24819365 Msa0400420:CDS 40.0%
! GCTACTTCTGAAAGAGGAAT+AGG + chr3_2:24819421-24819440 Msa0400420:CDS 40.0%
!! GTGTGCTGTTTCATTTCTGT+TGG + chr3_2:24819519-24819538 Msa0400420:intron 40.0%
CAAAAGAGCTAGTAGCAATG+AGG - chr3_2:24819548-24819567 None:intergenic 40.0%
!! CTCATTGCTACTAGCTCTTT+TGG + chr3_2:24819546-24819565 Msa0400420:intron 40.0%
ATAGAAACCTTCCTCGAAAG+TGG - chr3_2:24819780-24819799 None:intergenic 40.0%
ACCGTATGGTCATTATTCTG+CGG + chr3_2:24819823-24819842 Msa0400420:CDS 40.0%
GGTAGTGCAAGAAAATGACA+AGG - chr3_2:24819857-24819876 None:intergenic 40.0%
TGGGTACGGGATTTGTAATT+CGG - chr3_2:24819878-24819897 None:intergenic 40.0%
AACCACAACGCATAAGCATT+GGG - chr3_2:24819897-24819916 None:intergenic 40.0%
TAACCACAACGCATAAGCAT+TGG - chr3_2:24819898-24819917 None:intergenic 40.0%
TATTGGATCAGTTCCCCAAA+TGG + chr3_2:24819958-24819977 Msa0400420:CDS 40.0%
AGATATGTTTCACGGTTCAC+AGG - chr3_2:24819987-24820006 None:intergenic 40.0%
TGTGAACCGTGAAACATATC+TGG + chr3_2:24819986-24820005 Msa0400420:CDS 40.0%
ATCTGGACAGGCTTTCATTA+AGG + chr3_2:24820003-24820022 Msa0400420:CDS 40.0%
CAGTACTGTTGATCCGTTAA+AGG + chr3_2:24820447-24820466 Msa0400420:CDS 40.0%
!! AGTATTGGCTGTCACAATTG+GGG - chr3_2:24820476-24820495 None:intergenic 40.0%
!! CAGTATTGGCTGTCACAATT+GGG - chr3_2:24820477-24820496 None:intergenic 40.0%
!! ACAGTATTGGCTGTCACAAT+TGG - chr3_2:24820478-24820497 None:intergenic 40.0%
AACATGAGACCTTATCCACT+GGG - chr3_2:24820525-24820544 None:intergenic 40.0%
TAACATGAGACCTTATCCAC+TGG - chr3_2:24820526-24820545 None:intergenic 40.0%
CCTTGCAAATTCTGATGTCT+CGG - chr3_2:24820593-24820612 None:intergenic 40.0%
!! TTCTTTGAGAAGTACCACTC+AGG - chr3_2:24820661-24820680 None:intergenic 40.0%
CAAAGATCGTAGAGCAATGA+AGG + chr3_2:24820720-24820739 Msa0400420:CDS 40.0%
AGATGCTAGTAAGTGCTAAG+AGG - chr3_2:24820838-24820857 None:intergenic 40.0%
!! ATTTTTAGAGGGGTCAACCT+AGG + chr3_2:24821158-24821177 Msa0400420:intron 40.0%
GCGTAAACACTAGAAACGAT+AGG - chr3_2:24821195-24821214 None:intergenic 40.0%
AAATTCCTTTCGCTATCTGC+AGG + chr3_2:24821361-24821380 Msa0400420:intron 40.0%
CGAGAAACATAGACTAAACG+TGG - chr3_2:24821434-24821453 None:intergenic 40.0%
CCATGTGGTGATAGTTAACA+AGG - chr3_2:24821708-24821727 None:intergenic 40.0%
CCTTGTTAACTATCACCACA+TGG + chr3_2:24821705-24821724 Msa0400420:intron 40.0%
GTATCAGCTGTGCTTACTAA+TGG + chr3_2:24821867-24821886 Msa0400420:CDS 40.0%
TAAACAACAGCAAAGCCTTG+AGG + chr3_2:24821925-24821944 Msa0400420:CDS 40.0%
AAACAACAGCAAAGCCTTGA+GGG + chr3_2:24821926-24821945 Msa0400420:CDS 40.0%
AAAACACATAGCTTCCCTCA+AGG - chr3_2:24821943-24821962 None:intergenic 40.0%
!! TTTATGATGGATCCCAACCT+TGG + chr3_2:24821960-24821979 Msa0400420:CDS 40.0%
GCTATGTTCAATTTCCACAG+AGG + chr3_2:24821994-24822013 Msa0400420:CDS 40.0%
CAATTTCCACAGAGGTTTGA+TGG + chr3_2:24822002-24822021 Msa0400420:CDS 40.0%
TCAATACCATCAAACCTCTG+TGG - chr3_2:24822011-24822030 None:intergenic 40.0%
CGTACATCCAAAGTGATACT+GGG - chr3_2:24822301-24822320 None:intergenic 40.0%
TCACTTTGGATGTACGCATT+TGG + chr3_2:24822305-24822324 Msa0400420:intron 40.0%
CTGTACAAAAAGAGGCAAGA+TGG - chr3_2:24822484-24822503 None:intergenic 40.0%
ACAGATAAACTTGAGAGGGT+TGG + chr3_2:24822500-24822519 Msa0400420:intron 40.0%
ATAAACTTGAGAGGGTTGGA+TGG + chr3_2:24822504-24822523 Msa0400420:CDS 40.0%
ATTCAAGGTCCCGTTTATGT+GGG + chr3_2:24822528-24822547 Msa0400420:CDS 40.0%
ACATCCAGTACCCACATAAA+CGG - chr3_2:24822541-24822560 None:intergenic 40.0%
TATGCTTGGGTTTGATAGGA+GGG - chr3_2:24822596-24822615 None:intergenic 40.0%
TTATGCTTGGGTTTGATAGG+AGG - chr3_2:24822597-24822616 None:intergenic 40.0%
ACAGAGTTCAAATACCTTCG+GGG - chr3_2:24822895-24822914 None:intergenic 40.0%
AGTTTGACCTAGTAACCTCA+AGG - chr3_2:24822919-24822938 None:intergenic 40.0%
ACCACTAAGCTTCCATCTAA+TGG + chr3_2:24822942-24822961 Msa0400420:intron 40.0%
TCCATTAGATGGAAGCTTAG+TGG - chr3_2:24822946-24822965 None:intergenic 40.0%
! AAGCTTCCATCTAATGGACA+AGG + chr3_2:24822948-24822967 Msa0400420:intron 40.0%
GAAAATGAGGACGGTTAACA+AGG - chr3_2:24823144-24823163 None:intergenic 40.0%
GCCTCTACACTTATGGAAAA+TGG + chr3_2:24823345-24823364 Msa0400420:CDS 40.0%
AACTCCAGAAACTCTTCTCA+AGG + chr3_2:24823386-24823405 Msa0400420:CDS 40.0%
TAAATCAGAATGGGGAACTG+AGG + chr3_2:24823443-24823462 Msa0400420:CDS 40.0%
TTGCTCCAGATGTATAGTCT+TGG + chr3_2:24824021-24824040 Msa0400420:intron 40.0%
CTGATGTGAGATTTCACTCA+AGG + chr3_2:24824189-24824208 Msa0400420:intron 40.0%
CTTATATTCCACAGATTGGG+TGG + chr3_2:24824632-24824651 Msa0400420:intron 40.0%
ATATATAGACCTCCAACCAC+GGG - chr3_2:24824707-24824726 None:intergenic 40.0%
CCTTTAAATGCAGCAAGCTT+GGG - chr3_2:24824736-24824755 None:intergenic 40.0%
ACCTTTAAATGCAGCAAGCT+TGG - chr3_2:24824737-24824756 None:intergenic 40.0%
AAGCACTTGGTTCAAACGAT+CGG - chr3_2:24824779-24824798 None:intergenic 40.0%
TTTGAACCAAGTGCTTCGAT+GGG + chr3_2:24824783-24824802 Msa0400420:CDS 40.0%
GGAAGTGATTGGATAGATTG+TGG - chr3_2:24824908-24824927 None:intergenic 40.0%
ACAATACATGAGAAGGGGAA+TGG - chr3_2:24824929-24824948 None:intergenic 40.0%
CTTGTTAGTCAAGAGACAGA+CGG - chr3_2:24824962-24824981 None:intergenic 40.0%
GCATTACCTAACTGTGATTC+TGG + chr3_2:24825094-24825113 Msa0400420:intron 40.0%
!! AAGCTTTAGGGAGGAAAATG+GGG - chr3_2:24825597-24825616 None:intergenic 40.0%
!! GAAGCTTTAGGGAGGAAAAT+GGG - chr3_2:24825598-24825617 None:intergenic 40.0%
!! AGAAGCTTTAGGGAGGAAAA+TGG - chr3_2:24825599-24825618 None:intergenic 40.0%
!! TAGTGAAAGAAGCTTTAGGG+AGG - chr3_2:24825606-24825625 None:intergenic 40.0%
CACTACTGACATGAAACTTC+TGG + chr3_2:24825621-24825640 Msa0400420:intron 40.0%
!! AAGCTTTAGGGAGGAAAATG+GGG - chr3_2:24825597-24825616 None:intergenic 40.0%
!! GAAGCTTTAGGGAGGAAAAT+GGG - chr3_2:24825598-24825617 None:intergenic 40.0%
!! AGAAGCTTTAGGGAGGAAAA+TGG - chr3_2:24825599-24825618 None:intergenic 40.0%
!! TAGTGAAAGAAGCTTTAGGG+AGG - chr3_2:24825606-24825625 None:intergenic 40.0%
CACTACTGACATGAAACTTC+TGG + chr3_2:24825621-24825640 Msa0400420:intron 40.0%
TCTGCAAGTGAAATGAAAGG+GGG - chr3_2:24825766-24825785 None:intergenic 40.0%
AAGGATACCAGTTGCAAAGA+TGG - chr3_2:24826098-24826117 None:intergenic 40.0%
! GTGGTGTTGGAATTGATGAA+TGG + chr3_2:24826131-24826150 Msa0400420:CDS 40.0%
GTGTTGGAATTGATGAATGG+TGG + chr3_2:24826134-24826153 Msa0400420:CDS 40.0%
!! CATCTTTTTGCTGTGTTCCA+AGG + chr3_2:24826196-24826215 Msa0400420:CDS 40.0%
! GGTTTACTCAAAGTACTTGC+TGG + chr3_2:24826217-24826236 Msa0400420:CDS 40.0%
ATCTCTTACGCTGTTAACAG+CGG + chr3_2:24826382-24826401 Msa0400420:CDS 40.0%
! CTTTAAGGAAGGGGTAAAGA+TGG - chr3_2:24826465-24826484 None:intergenic 40.0%
CATCTTTACCCCTTCCTTAA+AGG + chr3_2:24826463-24826482 Msa0400420:CDS 40.0%
! CCATAAGACCTTTAAGGAAG+GGG - chr3_2:24826474-24826493 None:intergenic 40.0%
! CCCATAAGACCTTTAAGGAA+GGG - chr3_2:24826475-24826494 None:intergenic 40.0%
! CCCTTCCTTAAAGGTCTTAT+GGG + chr3_2:24826472-24826491 Msa0400420:CDS 40.0%
! TCCCATAAGACCTTTAAGGA+AGG - chr3_2:24826476-24826495 None:intergenic 40.0%
CAGTGACTCTTGTCGTAAAA+GGG - chr3_2:24826582-24826601 None:intergenic 40.0%
GATTCCACACATCTCAGATT+TGG - chr3_2:24826608-24826627 None:intergenic 40.0%
CTGCTAGAGAAAAGAAAAGC+TGG + chr3_2:24826630-24826649 Msa0400420:exon 40.0%
GAAAAGAAAAGCTGGCAGAT+TGG + chr3_2:24826638-24826657 Msa0400420:three_prime_UTR 40.0%
! GATCTGAGTTGCTTCTGAAG+TGG + chr3_2:24817674-24817693 Msa0400420:intron 45.0%
!! GAGACTATGATGGACTCAGA+AGG + chr3_2:24817826-24817845 Msa0400420:exon 45.0%
GATAAGCCGATGAAGACGTT+GGG + chr3_2:24817993-24818012 Msa0400420:CDS 45.0%
TTGCTACCCAACGTCTTCAT+CGG - chr3_2:24818002-24818021 None:intergenic 45.0%
AGCAAAGTCTGCCAGATTTG+TGG + chr3_2:24818017-24818036 Msa0400420:CDS 45.0%
GGTGATCCGTTTATTGCTTG+TGG + chr3_2:24818065-24818084 Msa0400420:CDS 45.0%
TCATAACACGGCCTACAAAC+CGG - chr3_2:24818104-24818123 None:intergenic 45.0%
GGCCGTGTTATGAGTATGAA+AGG + chr3_2:24818111-24818130 Msa0400420:CDS 45.0%
CAATCGATGAAGGACAGTGT+TGG + chr3_2:24818317-24818336 Msa0400420:intron 45.0%
!! GCACAGATCAGTATTGGTAG+CGG - chr3_2:24818358-24818377 None:intergenic 45.0%
TCTATGACTTAGGAGACTGC+TGG + chr3_2:24818487-24818506 Msa0400420:intron 45.0%
TCAGGTAGTCCTGCAATTCT+TGG + chr3_2:24818762-24818781 Msa0400420:intron 45.0%
TCACGATCTCCAAGAATTGC+AGG - chr3_2:24818774-24818793 None:intergenic 45.0%
!! ACGCATGTTGAGTTGGCAAA+TGG + chr3_2:24818875-24818894 Msa0400420:CDS 45.0%
!! TTGAGTTGGCAAATGGCGTA+TGG + chr3_2:24818882-24818901 Msa0400420:CDS 45.0%
! TGAGTTGGCAAATGGCGTAT+GGG + chr3_2:24818883-24818902 Msa0400420:CDS 45.0%
AATCACATTCCTCGGCTAAC+CGG + chr3_2:24818954-24818973 Msa0400420:CDS 45.0%
TTGAACAACCTCTTGTCCAC+CGG - chr3_2:24818976-24818995 None:intergenic 45.0%
TTCCCTATGCAGCAAACATC+AGG + chr3_2:24819296-24819315 Msa0400420:intron 45.0%
TCCCTATGCAGCAAACATCA+GGG + chr3_2:24819297-24819316 Msa0400420:intron 45.0%
! ACCCTGATGTTTGCTGCATA+GGG - chr3_2:24819301-24819320 None:intergenic 45.0%
! AACCCTGATGTTTGCTGCAT+AGG - chr3_2:24819302-24819321 None:intergenic 45.0%
CAAGCTACATTACCCAATCC+TGG - chr3_2:24819331-24819350 None:intergenic 45.0%
CAGGATTGGGTAATGTAGCT+TGG + chr3_2:24819329-24819348 Msa0400420:CDS 45.0%
!! GGAAAGAAAGAGTTGATGGC+TGG + chr3_2:24819350-24819369 Msa0400420:CDS 45.0%
! GGTCAAGCTACTTCTGAAAG+AGG + chr3_2:24819415-24819434 Msa0400420:CDS 45.0%
! GTCGAAAAGCACATCAGTAC+TGG - chr3_2:24819458-24819477 None:intergenic 45.0%
GCCGCAGAATAATGACCATA+CGG - chr3_2:24819827-24819846 None:intergenic 45.0%
!! AACGCATAAGCATTGGGTAC+GGG - chr3_2:24819891-24819910 None:intergenic 45.0%
!! CAACGCATAAGCATTGGGTA+CGG - chr3_2:24819892-24819911 None:intergenic 45.0%
TACCCAATGCTTATGCGTTG+TGG + chr3_2:24819892-24819911 Msa0400420:CDS 45.0%
ACCGTGAAACATATCTGGAC+AGG + chr3_2:24819991-24820010 Msa0400420:CDS 45.0%
GCCTGTCCAGATATGTTTCA+CGG - chr3_2:24819995-24820014 None:intergenic 45.0%
AGTTGCAGATATGATCGGGA+AGG + chr3_2:24820388-24820407 Msa0400420:intron 45.0%
GTTGCAGATATGATCGGGAA+GGG + chr3_2:24820389-24820408 Msa0400420:intron 45.0%
TTGCAGATATGATCGGGAAG+GGG + chr3_2:24820390-24820409 Msa0400420:intron 45.0%
ACAATTGGGGGCTCCTTTAA+CGG - chr3_2:24820463-24820482 None:intergenic 45.0%
!! GTATTGGCTGTCACAATTGG+GGG - chr3_2:24820475-24820494 None:intergenic 45.0%
! TGTTGACTACCCAGTGGATA+AGG + chr3_2:24820513-24820532 Msa0400420:CDS 45.0%
CCGAGACATCAGAATTTGCA+AGG + chr3_2:24820590-24820609 Msa0400420:CDS 45.0%
CTAGTAAGTGCTAAGAGGCA+TGG - chr3_2:24820833-24820852 None:intergenic 45.0%
TGAAAGTCCCTGAAGAAGGA+TGG + chr3_2:24820939-24820958 Msa0400420:CDS 45.0%
GAAAGTCCCTGAAGAAGGAT+GGG + chr3_2:24820940-24820959 Msa0400420:CDS 45.0%
TGATGCAAGATGGTACACCT+TGG + chr3_2:24820963-24820982 Msa0400420:CDS 45.0%
TGAACTACCTGGATCATTCC+TGG - chr3_2:24821013-24821032 None:intergenic 45.0%
GAAAACCTGCAGATAGCGAA+AGG - chr3_2:24821369-24821388 None:intergenic 45.0%
! TCGCTATCTGCAGGTTTTCT+TGG + chr3_2:24821370-24821389 Msa0400420:intron 45.0%
! CGCTATCTGCAGGTTTTCTT+GGG + chr3_2:24821371-24821390 Msa0400420:intron 45.0%
AGTGGAGGACTTGATACTGA+TGG + chr3_2:24821398-24821417 Msa0400420:CDS 45.0%
!! TTTCTCGTGAAAAGCGTCCA+GGG + chr3_2:24821447-24821466 Msa0400420:CDS 45.0%
TTCTTGTGATGTTGGAACCC+TGG - chr3_2:24821467-24821486 None:intergenic 45.0%
AGGGTTCCAACATCACAAGA+AGG + chr3_2:24821466-24821485 Msa0400420:CDS 45.0%
TTCCAACATCACAAGAAGGC+CGG + chr3_2:24821470-24821489 Msa0400420:CDS 45.0%
TACACCTCCCAGTATCACTT+TGG + chr3_2:24822291-24822310 Msa0400420:intron 45.0%
ACATCCAAAGTGATACTGGG+AGG - chr3_2:24822298-24822317 None:intergenic 45.0%
GCGTACATCCAAAGTGATAC+TGG - chr3_2:24822302-24822321 None:intergenic 45.0%
! GCTATCAGGAAGTACACTTC+TGG + chr3_2:24822344-24822363 Msa0400420:intron 45.0%
CATTCAAGGTCCCGTTTATG+TGG + chr3_2:24822527-24822546 Msa0400420:CDS 45.0%
CATCCAGTACCCACATAAAC+GGG - chr3_2:24822540-24822559 None:intergenic 45.0%
! CTTGTTTCTTCACTTTGCGG+TGG + chr3_2:24822627-24822646 Msa0400420:CDS 45.0%
AGAGGATATAGAAGAAGGGG+TGG + chr3_2:24822743-24822762 Msa0400420:CDS 45.0%
GATATAGAAGAAGGGGTGGA+AGG + chr3_2:24822747-24822766 Msa0400420:CDS 45.0%
AGAGTTCAAATACCTTCGGG+GGG - chr3_2:24822893-24822912 None:intergenic 45.0%
CAGAGTTCAAATACCTTCGG+GGG - chr3_2:24822894-24822913 None:intergenic 45.0%
CTCTGTTCCTTGAGGTTACT+AGG + chr3_2:24822909-24822928 Msa0400420:intron 45.0%
CACAAATGAGCCTTGAGAGA+AGG + chr3_2:24823298-24823317 Msa0400420:CDS 45.0%
ATGAGCCTTGAGAGAAGGTT+TGG + chr3_2:24823303-24823322 Msa0400420:CDS 45.0%
ACTGACCAAACCTTCTCTCA+AGG - chr3_2:24823311-24823330 None:intergenic 45.0%
TCCAGAAACTCTTCTCAAGG+AGG + chr3_2:24823389-24823408 Msa0400420:CDS 45.0%
! TGAGGCCCAACCCAAATTTT+AGG + chr3_2:24823941-24823960 Msa0400420:intron 45.0%
!! GCCCAACCCAAATTTTAGGA+TGG + chr3_2:24823945-24823964 Msa0400420:intron 45.0%
TGAGCCTATCCAAGATCTGT+TGG + chr3_2:24823972-24823991 Msa0400420:intron 45.0%
GAGCCTATCCAAGATCTGTT+GGG + chr3_2:24823973-24823992 Msa0400420:intron 45.0%
TAGCCCAACAGATCTTGGAT+AGG - chr3_2:24823979-24823998 None:intergenic 45.0%
AAACTCGAATGGTCCGATTG+CGG - chr3_2:24824003-24824022 None:intergenic 45.0%
! ACATCTGGAGCAAACTCGAA+TGG - chr3_2:24824014-24824033 None:intergenic 45.0%
CACGTCCAAGACTATACATC+TGG - chr3_2:24824029-24824048 None:intergenic 45.0%
! TGTATAGTCTTGGACGTGTG+AGG + chr3_2:24824031-24824050 Msa0400420:intron 45.0%
! GTATAGTCTTGGACGTGTGA+GGG + chr3_2:24824032-24824051 Msa0400420:intron 45.0%
ACTTAGTAGCTGCAACTTGG+AGG - chr3_2:24824345-24824364 None:intergenic 45.0%
TCCAAGTTGCAGCTACTAAG+TGG + chr3_2:24824344-24824363 Msa0400420:intron 45.0%
TCCACTTAGTAGCTGCAACT+TGG - chr3_2:24824348-24824367 None:intergenic 45.0%
!! CCCAAGCTTGCTGCATTTAA+AGG + chr3_2:24824733-24824752 Msa0400420:CDS 45.0%
GTTTGAACCAAGTGCTTCGA+TGG + chr3_2:24824782-24824801 Msa0400420:CDS 45.0%
CCACTATAACCGTACCAGAT+GGG - chr3_2:24824847-24824866 None:intergenic 45.0%
TCCACTATAACCGTACCAGA+TGG - chr3_2:24824848-24824867 None:intergenic 45.0%
! TCTGGTACGGTTATAGTGGA+AGG + chr3_2:24824848-24824867 Msa0400420:CDS 45.0%
GAAGGTTAAAGTGGCTTGAG+AGG + chr3_2:24824866-24824885 Msa0400420:CDS 45.0%
AGAAGGGGAATGGAAGTGAT+TGG - chr3_2:24824919-24824938 None:intergenic 45.0%
! GAGAAGAAAGCACAAACCTG+TGG - chr3_2:24824994-24825013 None:intergenic 45.0%
TAGCTCGATTGGTGAGCTAA+GGG - chr3_2:24825264-24825283 None:intergenic 45.0%
ACCAATCGAGCTACATACGT+GGG + chr3_2:24825271-24825290 Msa0400420:intron 45.0%
AGCTACATACGTGGGACTTA+CGG + chr3_2:24825279-24825298 Msa0400420:intron 45.0%
GTGGGACTTACGGTTACAAA+GGG + chr3_2:24825289-24825308 Msa0400420:intron 45.0%
TGGGACTTACGGTTACAAAG+GGG + chr3_2:24825290-24825309 Msa0400420:intron 45.0%
AATGGGGGAGAATACAACGT+AGG - chr3_2:24825581-24825600 None:intergenic 45.0%
!! AGCTTTAGGGAGGAAAATGG+GGG - chr3_2:24825596-24825615 None:intergenic 45.0%
AATGGGGGAGAATACAACGT+AGG - chr3_2:24825581-24825600 None:intergenic 45.0%
!! AGCTTTAGGGAGGAAAATGG+GGG - chr3_2:24825596-24825615 None:intergenic 45.0%
CAACTGGTATCCTTGAGATG+AGG + chr3_2:24826104-24826123 Msa0400420:CDS 45.0%
TTAACAGCGGCTACCAATCA+TGG + chr3_2:24826395-24826414 Msa0400420:CDS 45.0%
TAACAGCGGCTACCAATCAT+GGG + chr3_2:24826396-24826415 Msa0400420:CDS 45.0%
CCCCTTCCTTAAAGGTCTTA+TGG + chr3_2:24826471-24826490 Msa0400420:CDS 45.0%
AATGGACCAAACAACCACGA+TGG - chr3_2:24826518-24826537 None:intergenic 45.0%
CCAGTGACTCTTGTCGTAAA+AGG - chr3_2:24826583-24826602 None:intergenic 45.0%
! CCTTTTACGACAAGAGTCAC+TGG + chr3_2:24826580-24826599 Msa0400420:CDS 45.0%
!! GAAATAAAAATAAAATTAAA+CGG - chr3_2:24821547-24821566 None:intergenic 5.0%
ATGGACTCAGAAGGAGAAGC+TGG + chr3_2:24817835-24817854 Msa0400420:CDS 50.0%
TGGACTCAGAAGGAGAAGCT+GGG + chr3_2:24817836-24817855 Msa0400420:CDS 50.0%
GGATAAGCCGATGAAGACGT+TGG + chr3_2:24817992-24818011 Msa0400420:intron 50.0%
TTGTGGTGTTTGTGCCTTCC+CGG + chr3_2:24818082-24818101 Msa0400420:CDS 50.0%
! TTTGTGCCTTCCCGGTTTGT+AGG + chr3_2:24818090-24818109 Msa0400420:CDS 50.0%
CATAACACGGCCTACAAACC+GGG - chr3_2:24818103-24818122 None:intergenic 50.0%
!! CGATGAAGGACAGTGTTGGT+AGG + chr3_2:24818321-24818340 Msa0400420:intron 50.0%
CTTGGAGATCGTGAAGAGGA+TGG + chr3_2:24818780-24818799 Msa0400420:CDS 50.0%
TCGCAGAACGCATGTTGAGT+TGG + chr3_2:24818868-24818887 Msa0400420:CDS 50.0%
CATTGACATCCTCTCAGGTG+AGG - chr3_2:24819121-24819140 None:intergenic 50.0%
CTCACCTGAGAGGATGTCAA+TGG + chr3_2:24819119-24819138 Msa0400420:CDS 50.0%
GATGCCATTGACATCCTCTC+AGG - chr3_2:24819126-24819145 None:intergenic 50.0%
GCATCTCCTGTAAATGCTCG+CGG + chr3_2:24819141-24819160 Msa0400420:CDS 50.0%
CATCTCCTGTAAATGCTCGC+GGG + chr3_2:24819142-24819161 Msa0400420:CDS 50.0%
AACATCAGGGTTGCTGAACC+AGG + chr3_2:24819310-24819329 Msa0400420:CDS 50.0%
AGGGTTGCTGAACCAGGATT+GGG + chr3_2:24819316-24819335 Msa0400420:CDS 50.0%
AATACTGCTCCGATGAGCAC+AGG + chr3_2:24819394-24819413 Msa0400420:CDS 50.0%
GTAGCTTGACCTGTGCTCAT+CGG - chr3_2:24819406-24819425 None:intergenic 50.0%
AAGCTCGACAACCACTTTCG+AGG + chr3_2:24819766-24819785 Msa0400420:CDS 50.0%
TCGACAACCACTTTCGAGGA+AGG + chr3_2:24819770-24819789 Msa0400420:CDS 50.0%
GGTTCACAGGAAGCCATTTG+GGG - chr3_2:24819974-24819993 None:intergenic 50.0%
CGGTTCACAGGAAGCCATTT+GGG - chr3_2:24819975-24819994 None:intergenic 50.0%
ACGGTTCACAGGAAGCCATT+TGG - chr3_2:24819976-24819995 None:intergenic 50.0%
ACTTCTCCACAAGCACTTGC+AGG + chr3_2:24820139-24820158 Msa0400420:intron 50.0%
TCCACAAGCACTTGCAGGAA+AGG + chr3_2:24820144-24820163 Msa0400420:intron 50.0%
TCCTTTCCTGCAAGTGCTTG+TGG - chr3_2:24820148-24820167 None:intergenic 50.0%
TCAACGGCTGCTAACTGTGA+AGG - chr3_2:24820418-24820437 None:intergenic 50.0%
!! TCTTGCTGTTGACTACCCAG+TGG + chr3_2:24820507-24820526 Msa0400420:CDS 50.0%
! GTGCTAAGAGGCATGGCTTA+TGG - chr3_2:24820826-24820845 None:intergenic 50.0%
GCAGTGAAAGTCCCTGAAGA+AGG + chr3_2:24820935-24820954 Msa0400420:CDS 50.0%
GCATCACCCATCCTTCTTCA+GGG - chr3_2:24820949-24820968 None:intergenic 50.0%
TGCATCACCCATCCTTCTTC+AGG - chr3_2:24820950-24820969 None:intergenic 50.0%
GAAGGATGGGTGATGCAAGA+TGG + chr3_2:24820953-24820972 Msa0400420:CDS 50.0%
!! TGGTCTCTGGTGTTGTTTCC+AGG - chr3_2:24820989-24821008 None:intergenic 50.0%
AACAACACCAGAGACCATCC+AGG + chr3_2:24820992-24821011 Msa0400420:CDS 50.0%
GATCATTCCTGGATGGTCTC+TGG - chr3_2:24821002-24821021 None:intergenic 50.0%
AGACCATCCAGGAATGATCC+AGG + chr3_2:24821003-24821022 Msa0400420:CDS 50.0%
CTACCTGGATCATTCCTGGA+TGG - chr3_2:24821009-24821028 None:intergenic 50.0%
CAGTATCAAGTCCTCCACTC+TGG - chr3_2:24821397-24821416 None:intergenic 50.0%
!! GTTTCTCGTGAAAAGCGTCC+AGG + chr3_2:24821446-24821465 Msa0400420:CDS 50.0%
CACAAGTGCATTCATGGCAC+CGG - chr3_2:24821492-24821511 None:intergenic 50.0%
GCCATGAATGCACTTGTGAG+TGG + chr3_2:24821494-24821513 Msa0400420:intron 50.0%
GCCACTCACAAGTGCATTCA+TGG - chr3_2:24821498-24821517 None:intergenic 50.0%
AAGGAGATGGTAGACCCATG+TGG - chr3_2:24821723-24821742 None:intergenic 50.0%
! CCGGATGCTTTAAGCCCAAA+GGG - chr3_2:24822261-24822280 None:intergenic 50.0%
! CCCTTTGGGCTTAAAGCATC+CGG + chr3_2:24822258-24822277 Msa0400420:intron 50.0%
! TCCGGATGCTTTAAGCCCAA+AGG - chr3_2:24822262-24822281 None:intergenic 50.0%
AGAGGGTTGGATGGCATTCA+AGG + chr3_2:24822513-24822532 Msa0400420:CDS 50.0%
AGACTAAAGACGGGCACAGT+TGG - chr3_2:24822723-24822742 None:intergenic 50.0%
TGTGCCCGTCTTTAGTCTAG+AGG + chr3_2:24822725-24822744 Msa0400420:CDS 50.0%
GAGTTCAAATACCTTCGGGG+GGG - chr3_2:24822892-24822911 None:intergenic 50.0%
!! GTTTCTGGAGTTGCAGACTG+AGG - chr3_2:24823378-24823397 None:intergenic 50.0%
GCCTCCTTGAGAAGAGTTTC+TGG - chr3_2:24823393-24823412 None:intergenic 50.0%
!! ACTATGCTGGCTCCAGAAAG+AGG + chr3_2:24823699-24823718 Msa0400420:intron 50.0%
!! CTATGCTGGCTCCAGAAAGA+GGG + chr3_2:24823700-24823719 Msa0400420:intron 50.0%
GCTCCAGAAAGAGGGAGTTT+GGG + chr3_2:24823708-24823727 Msa0400420:intron 50.0%
CTCCAGAAAGAGGGAGTTTG+GGG + chr3_2:24823709-24823728 Msa0400420:intron 50.0%
TCCAGAAAGAGGGAGTTTGG+GGG + chr3_2:24823710-24823729 Msa0400420:intron 50.0%
TCTGTTGGGCTATCCGCAAT+CGG + chr3_2:24823987-24824006 Msa0400420:intron 50.0%
!! TGCAACTTGGAGGTGGATTG+AGG - chr3_2:24824335-24824354 None:intergenic 50.0%
TAGTAGCTGCAACTTGGAGG+TGG - chr3_2:24824342-24824361 None:intergenic 50.0%
CCATAGATCCACCCAATCTG+TGG - chr3_2:24824643-24824662 None:intergenic 50.0%
CCACAGATTGGGTGGATCTA+TGG + chr3_2:24824640-24824659 Msa0400420:intron 50.0%
! CTAAAGCCCATCGAAGCACT+TGG - chr3_2:24824792-24824811 None:intergenic 50.0%
! CAAGTGCTTCGATGGGCTTT+AGG + chr3_2:24824790-24824809 Msa0400420:CDS 50.0%
!! TCGATGGGCTTTAGGTTCAG+TGG + chr3_2:24824798-24824817 Msa0400420:CDS 50.0%
TAAGTCGGCATTGTCCCATC+TGG + chr3_2:24824830-24824849 Msa0400420:CDS 50.0%
CCCATCTGGTACGGTTATAG+TGG + chr3_2:24824844-24824863 Msa0400420:CDS 50.0%
TTAGTCAAGAGACAGACGGC+AGG - chr3_2:24824958-24824977 None:intergenic 50.0%
!! TTTTAAGGAGGTTCGGGGTC+TGG - chr3_2:24825229-24825248 None:intergenic 50.0%
GTAGCTCGATTGGTGAGCTA+AGG - chr3_2:24825265-24825284 None:intergenic 50.0%
CACCAATCGAGCTACATACG+TGG + chr3_2:24825270-24825289 Msa0400420:intron 50.0%
TCCCACGTATGTAGCTCGAT+TGG - chr3_2:24825275-24825294 None:intergenic 50.0%
CGTGGGACTTACGGTTACAA+AGG + chr3_2:24825288-24825307 Msa0400420:intron 50.0%
CTGGTATCCTTGAGATGAGG+TGG + chr3_2:24826107-24826126 Msa0400420:CDS 50.0%
ATCCTTGAGATGAGGTGGAG+TGG + chr3_2:24826112-24826131 Msa0400420:CDS 50.0%
AACCTTGTCGGAGTTGTTGC+AGG + chr3_2:24826358-24826377 Msa0400420:CDS 50.0%
TTCCTGCAACAACTCCGACA+AGG - chr3_2:24826363-24826382 None:intergenic 50.0%
AACAGCGGCTACCAATCATG+GGG + chr3_2:24826397-24826416 Msa0400420:CDS 50.0%
CAAAGAGTGGTCCCCATGAT+TGG - chr3_2:24826411-24826430 None:intergenic 50.0%
CAATCATGGGGACCACTCTT+TGG + chr3_2:24826409-24826428 Msa0400420:CDS 50.0%
GGCGTCCCATAAGACCTTTA+AGG - chr3_2:24826480-24826499 None:intergenic 50.0%
GACCAAACAACCACGATGGT+TGG - chr3_2:24826514-24826533 None:intergenic 50.0%
! GGTCCCAAATCTGAGATGTG+TGG + chr3_2:24826601-24826620 Msa0400420:CDS 50.0%
GGACTCAGAAGGAGAAGCTG+GGG + chr3_2:24817837-24817856 Msa0400420:CDS 55.0%
!! GGACAGTGTTGGTAGGTGCA+TGG + chr3_2:24818328-24818347 Msa0400420:intron 55.0%
GGAGATCGTGAAGAGGATGG+TGG + chr3_2:24818783-24818802 Msa0400420:CDS 55.0%
TATCTGCAGCCTCACCTGAG+AGG + chr3_2:24819109-24819128 Msa0400420:CDS 55.0%
CGTTTCCCGCGAGCATTTAC+AGG - chr3_2:24819150-24819169 None:intergenic 55.0%
CAGGGTTGCTGAACCAGGAT+TGG + chr3_2:24819315-24819334 Msa0400420:CDS 55.0%
TTGAACCACGAGCACCTGAG+TGG + chr3_2:24820644-24820663 Msa0400420:CDS 55.0%
AAGTACCACTCAGGTGCTCG+TGG - chr3_2:24820652-24820671 None:intergenic 55.0%
CAAGATGGTACACCTTGGCC+TGG + chr3_2:24820968-24820987 Msa0400420:CDS 55.0%
!! CTGGTGTTGTTTCCAGGCCA+AGG - chr3_2:24820983-24821002 None:intergenic 55.0%
! CAGGTTTTCTTGGGCCAGAG+TGG + chr3_2:24821380-24821399 Msa0400420:intron 55.0%
! GTTTTCTTGGGCCAGAGTGG+AGG + chr3_2:24821383-24821402 Msa0400420:CDS 55.0%
CACCGGCCTTCTTGTGATGT+TGG - chr3_2:24821475-24821494 None:intergenic 55.0%
CCAAAGGGCTCTTGCATGAG+GGG - chr3_2:24822246-24822265 None:intergenic 55.0%
CCCAAAGGGCTCTTGCATGA+GGG - chr3_2:24822247-24822266 None:intergenic 55.0%
CCCTCATGCAAGAGCCCTTT+GGG + chr3_2:24822244-24822263 Msa0400420:intron 55.0%
GGTCCCGTTTATGTGGGTAC+TGG + chr3_2:24822534-24822553 Msa0400420:CDS 55.0%
CGGGGGGGAGAATCGTAAAA+TGG - chr3_2:24822877-24822896 None:intergenic 55.0%
TTTACGATTCTCCCCCCCGA+AGG + chr3_2:24822878-24822897 Msa0400420:intron 55.0%
GGCTCCAGAAAGAGGGAGTT+TGG + chr3_2:24823707-24823726 Msa0400420:intron 55.0%
CCAGAAAGAGGGAGTTTGGG+GGG + chr3_2:24823711-24823730 Msa0400420:intron 55.0%
AAAGAGGGAGTTTGGGGGGT+GGG + chr3_2:24823715-24823734 Msa0400420:intron 55.0%
GCGGATAGCCCAACAGATCT+TGG - chr3_2:24823984-24824003 None:intergenic 55.0%
! GGATTTAAGATGCACGCCCG+TGG + chr3_2:24824688-24824707 Msa0400420:CDS 55.0%
TTAAGATGCACGCCCGTGGT+TGG + chr3_2:24824692-24824711 Msa0400420:CDS 55.0%
CGGCATTGTCCCATCTGGTA+CGG + chr3_2:24824835-24824854 Msa0400420:CDS 55.0%
CAAGAGACAGACGGCAGGTA+AGG - chr3_2:24824953-24824972 None:intergenic 55.0%
CACCACTCCACCTCATCTCA+AGG - chr3_2:24826117-24826136 None:intergenic 55.0%
GAGATGAGGTGGAGTGGTGT+TGG + chr3_2:24826118-24826137 Msa0400420:CDS 55.0%
CAACCACGATGGTTGGCGTT+CGG - chr3_2:24826507-24826526 None:intergenic 55.0%
CGCCAACCATCGTGGTTGTT+TGG + chr3_2:24826509-24826528 Msa0400420:CDS 55.0%
ACACGGCCTACAAACCGGGA+AGG - chr3_2:24818099-24818118 None:intergenic 60.0%
TGGCAAATGGCGTATGGGCG+AGG + chr3_2:24818888-24818907 Msa0400420:CDS 60.0%
AATGGCGTATGGGCGAGGTG+AGG + chr3_2:24818893-24818912 Msa0400420:CDS 60.0%
CACATTCCTCGGCTAACCGG+TGG + chr3_2:24818957-24818976 Msa0400420:CDS 60.0%
! TCTTGTCCACCGGTTAGCCG+AGG - chr3_2:24818966-24818985 None:intergenic 60.0%
TCGGCTAACCGGTGGACAAG+AGG + chr3_2:24818965-24818984 Msa0400420:CDS 60.0%
CCCCTCATGCAAGAGCCCTT+TGG + chr3_2:24822243-24822262 Msa0400420:intron 60.0%
GCCCAAAGGGCTCTTGCATG+AGG - chr3_2:24822248-24822267 None:intergenic 60.0%
CCCCCCAAACTCCCTCTTTC+TGG - chr3_2:24823714-24823733 None:intergenic 60.0%
GAAAGAGGGAGTTTGGGGGG+TGG + chr3_2:24823714-24823733 Msa0400420:intron 60.0%
AAGAGGGAGTTTGGGGGGTG+GGG + chr3_2:24823716-24823735 Msa0400420:intron 60.0%
CGATGGTTGGCGTTCGGTTC+TGG - chr3_2:24826501-24826520 None:intergenic 60.0%
GAACCGAACGCCAACCATCG+TGG + chr3_2:24826501-24826520 Msa0400420:CDS 60.0%
AGAGGGAGTTTGGGGGGTGG+GGG + chr3_2:24823717-24823736 Msa0400420:intron 65.0%
AGATGCACGCCCGTGGTTGG+AGG + chr3_2:24824695-24824714 Msa0400420:CDS 65.0%
GGCGTATGGGCGAGGTGAGG+AGG + chr3_2:24818896-24818915 Msa0400420:CDS 70.0%
GAGGGAGTTTGGGGGGTGGG+GGG + chr3_2:24823718-24823737 Msa0400420:intron 70.0%
GAGTTTGGGGGGTGGGGGGA+CGG + chr3_2:24823722-24823741 Msa0400420:intron 70.0%
!! GGGGGGTGGGGGGACGGACT+TGG + chr3_2:24823728-24823747 Msa0400420:intron 80.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 24817012 24826980 24817012 ID=Msa0400420;Name=Msa0400420
chr3_2 mRNA 24817012 24826980 24817012 ID=Msa0400420-mRNA-1;Parent=Msa0400420;Name=Msa0400420-mRNA-1;_AED=0.03;_eAED=0.03;_QI=488|1|1|1|0.92|0.86|15|344|1078
chr3_2 exon 24817012 24817342 24817012 ID=Msa0400420-mRNA-1:exon:5155;Parent=Msa0400420-mRNA-1
chr3_2 exon 24817675 24817858 24817675 ID=Msa0400420-mRNA-1:exon:5156;Parent=Msa0400420-mRNA-1
chr3_2 exon 24817993 24818188 24817993 ID=Msa0400420-mRNA-1:exon:5157;Parent=Msa0400420-mRNA-1
chr3_2 exon 24818766 24818986 24818766 ID=Msa0400420-mRNA-1:exon:5158;Parent=Msa0400420-mRNA-1
chr3_2 exon 24819096 24819213 24819096 ID=Msa0400420-mRNA-1:exon:5159;Parent=Msa0400420-mRNA-1
chr3_2 exon 24819308 24819488 24819308 ID=Msa0400420-mRNA-1:exon:5160;Parent=Msa0400420-mRNA-1
chr3_2 exon 24819758 24820024 24819758 ID=Msa0400420-mRNA-1:exon:5161;Parent=Msa0400420-mRNA-1
chr3_2 exon 24820396 24820741 24820396 ID=Msa0400420-mRNA-1:exon:5162;Parent=Msa0400420-mRNA-1
chr3_2 exon 24820887 24821024 24820887 ID=Msa0400420-mRNA-1:exon:5163;Parent=Msa0400420-mRNA-1
chr3_2 exon 24821383 24821508 24821383 ID=Msa0400420-mRNA-1:exon:5164;Parent=Msa0400420-mRNA-1
chr3_2 exon 24821861 24822073 24821861 ID=Msa0400420-mRNA-1:exon:5165;Parent=Msa0400420-mRNA-1
chr3_2 exon 24822504 24822768 24822504 ID=Msa0400420-mRNA-1:exon:5166;Parent=Msa0400420-mRNA-1
chr3_2 exon 24823262 24823464 24823262 ID=Msa0400420-mRNA-1:exon:5167;Parent=Msa0400420-mRNA-1
chr3_2 exon 24824646 24824996 24824646 ID=Msa0400420-mRNA-1:exon:5168;Parent=Msa0400420-mRNA-1
chr3_2 exon 24826052 24826980 24826052 ID=Msa0400420-mRNA-1:exon:5169;Parent=Msa0400420-mRNA-1
chr3_2 five_prime_UTR 24817012 24817342 24817012 ID=Msa0400420-mRNA-1:five_prime_utr;Parent=Msa0400420-mRNA-1
chr3_2 five_prime_UTR 24817675 24817831 24817675 ID=Msa0400420-mRNA-1:five_prime_utr;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24817832 24817858 24817832 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24817993 24818188 24817993 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24818766 24818986 24818766 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24819096 24819213 24819096 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24819308 24819488 24819308 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24819758 24820024 24819758 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24820396 24820741 24820396 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24820887 24821024 24820887 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24821383 24821508 24821383 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24821861 24822073 24821861 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24822504 24822768 24822504 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24823262 24823464 24823262 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24824646 24824996 24824646 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 CDS 24826052 24826636 24826052 ID=Msa0400420-mRNA-1:cds;Parent=Msa0400420-mRNA-1
chr3_2 three_prime_UTR 24826637 24826980 24826637 ID=Msa0400420-mRNA-1:three_prime_utr;Parent=Msa0400420-mRNA-1
Gene Sequence

>Msa0400420

ATGATGGACTCAGAAGGAGAAGCTGGGGATAAGCCGATGAAGACGTTGGGTAGCAAAGTCTGCCAGATTTGTGGTGATAATATCGGTAGTGCTGTTAATGGTGATCCGTTTATTGCTTGTGGTGTTTGTGCCTTCCCGGTTTGTAGGCCGTGTTATGAGTATGAAAGGAAAGATGGGAATCAGTCTTGCCCACAGTGCAAAACTCGATACAATAAGCACAAAGGTAGTCCTGCAATTCTTGGAGATCGTGAAGAGGATGGTGGTGCTGATAATGATGCCAATGACTTCAAGTACAATTCAGAAACTCAGACCCAAAAGCAAAAGATCGCAGAACGCATGTTGAGTTGGCAAATGGCGTATGGGCGAGGTGAGGAGGTTGATGCTCCAAATTATGATAAGGAAGTTTCTCACAATCACATTCCTCGGCTAACCGGTGGACAAGAGACATCTGGAGAATTATCTGCAGCCTCACCTGAGAGGATGTCAATGGCATCTCCTGTAAATGCTCGCGGGAAACGAGTTCATAATCATCCATCATATTCGTCTGATCTTAATCAATCACCAAACATCAGGGTTGCTGAACCAGGATTGGGTAATGTAGCTTGGAAAGAAAGAGTTGATGGCTGGAAAATGAAGCACGATAATAAGAATACTGCTCCGATGAGCACAGGTCAAGCTACTTCTGAAAGAGGAATAGGAGATATTGATGCCAGTACTGATGTGCTTTTCGACGATTCCTTGTTGAATGATGAAGCTCGACAACCACTTTCGAGGAAGGTTTCTATTCCATCTTCTAGGATAAATCCATACCGTATGGTCATTATTCTGCGGCTTGTTATCCTTGTCATTTTCTTGCACTACCGAATTACAAATCCCGTACCCAATGCTTATGCGTTGTGGTTAATATCAGTTATATGTGAAGTTTGGTTTGCCTTTTCTTGGATATTGGATCAGTTCCCCAAATGGCTTCCTGTGAACCGTGAAACATATCTGGACAGGCTTTCATTAAGATATGATCGGGAAGGGGAACCTTCACAGTTAGCAGCCGTTGACATTTTCGTCAGTACTGTTGATCCGTTAAAGGAGCCCCCAATTGTGACAGCCAATACTGTACTATCAATTCTTGCTGTTGACTACCCAGTGGATAAGGTCTCATGTTATGTCTCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTCTGCAAGAAATATGAAATTGAACCACGAGCACCTGAGTGGTACTTCTCAAAGAAAATTGACTACTTGAAAGATAAGGTCCAAGCATCATTTGTCAAAGATCGTAGAGCAATGAAGAGAGAATATGAAGAATTCAAAATTCGTATCAATGGACTCGTTGCAAAAGCAGTGAAAGTCCCTGAAGAAGGATGGGTGATGCAAGATGGTACACCTTGGCCTGGAAACAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAGAGTGGAGGACTTGATACTGATGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAGGCCGGTGCCATGAATGCACTTGTTCGTGTATCAGCTGTGCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCATTACATAAACAACAGCAAAGCCTTGAGGGAAGCTATGTGTTTTATGATGGATCCCAACCTTGGAAAAAATGTTTGCTATGTTCAATTTCCACAGAGGTTTGATGGTATTGATAGGAACGATCGATATGCCAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAGGGTTGGATGGCATTCAAGGTCCCGTTTATGTGGGTACTGGATGTGTCTTCAATAGAACTGCTTTATATGGTTATGACCCTCCTATCAAACCCAAGCATAAAAAGCCTAGTCTTGTTTCTTCACTTTGCGGTGGAGATCGAAACAAGAGCTCAAAATCTAGCAAGAAAGACTCAAAAAAGAATAAATCTAGCAAGCATGTTGATCCAACTGTGCCCGTCTTTAGTCTAGAGGATATAGAAGAAGGGGTGGAAGGTGCTGGATTTGATGATGAAAAATCACTACTCATGTCACAAATGAGCCTTGAGAGAAGGTTTGGTCAGTCTGCTGTTTTTGTTGCCTCTACACTTATGGAAAATGGTGGCGTTCCTCAGTCTGCAACTCCAGAAACTCTTCTCAAGGAGGCAATTCATGTTATCAGTTGTGGTTATGAAGATAAATCAGAATGGGGAACTGAGATTGGGTGGATCTATGGTTCTGTCACAGAAGATATTCTTACTGGATTTAAGATGCACGCCCGTGGTTGGAGGTCTATATATTGCATGCCCAAGCTTGCTGCATTTAAAGGTTCAGCTCCTATCAATCTTTCCGATCGTTTGAACCAAGTGCTTCGATGGGCTTTAGGTTCAGTGGAAATTCTACTAAGTCGGCATTGTCCCATCTGGTACGGTTATAGTGGAAGGTTAAAGTGGCTTGAGAGGTTTGCGTATATAAACACCACAATCTATCCAATCACTTCCATTCCCCTTCTCATGTATTGTACCTTACCTGCCGTCTGTCTCTTGACTAACAAGTTTATTATTCCACAGATTAGTAACATTGCAAGTATATGGTTCATATCTCTCTTTCTTTCCATCTTTGCAACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGAATTGATGAATGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTTTCAGCTCATCTTTTTGCTGTGTTCCAAGGTTTACTCAAAGTACTTGCTGGAATTGACACAAACTTCACTGTTACCTCAAAAGCTTCAGATGAAGATGGAGACTCCGCAGAACTATACATGTTTAAATGGACAACACTTCTCATTCCACCAACAACTCTTCTCATTATAAACCTTGTCGGAGTTGTTGCAGGAATCTCTTACGCTGTTAACAGCGGCTACCAATCATGGGGACCACTCTTTGGTAAACTTTTCTTTGCATTTTGGGTGATCATCCATCTTTACCCCTTCCTTAAAGGTCTTATGGGACGCCAGAACCGAACGCCAACCATCGTGGTTGTTTGGTCCATTCTTCTTGCATCCATTTTTTCACTTTTATGGGTTCGAATCGACCCTTTTACGACAAGAGTCACTGGTCCCAAATCTGAGATGTGTGGAATCAACTGCTAG
Protein sequence

>Msa0400420

MMDSEGEAGDKPMKTLGSKVCQICGDNIGSAVNGDPFIACGVCAFPVCRPCYEYERKDGNQSCPQCKTRYNKHKGSPAILGDREEDGGADNDANDFKYNSETQTQKQKIAERMLSWQMAYGRGEEVDAPNYDKEVSHNHIPRLTGGQETSGELSAASPERMSMASPVNARGKRVHNHPSYSSDLNQSPNIRVAEPGLGNVAWKERVDGWKMKHDNKNTAPMSTGQATSERGIGDIDASTDVLFDDSLLNDEARQPLSRKVSIPSSRINPYRMVIILRLVILVIFLHYRITNPVPNAYALWLISVICEVWFAFSWILDQFPKWLPVNRETYLDRLSLRYDREGEPSQLAAVDIFVSTVDPLKEPPIVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYEIEPRAPEWYFSKKIDYLKDKVQASFVKDRRAMKREYEEFKIRINGLVAKAVKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYDPPIKPKHKKPSLVSSLCGGDRNKSSKSSKKDSKKNKSSKHVDPTVPVFSLEDIEEGVEGAGFDDEKSLLMSQMSLERRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLAAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYINTTIYPITSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEMCGINC*