Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1281610 | sp|Q9SJT1|SAE2_ARATH | 75.763 | 524 | 104 | 2 | 4 | 504 | 8 | 531 | 0.0 | 838 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1281610 | A0A072TPF5 | 95.276 | 635 | 8 | 1 | 1 | 613 | 1 | 635 | 0.0 | 1235 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014830 | Msa1281610 | 0.805516 | 1.285591e-49 | -8.615850e-47 |
Msa0610090 | Msa1281610 | 0.804256 | 2.357370e-49 | -8.615850e-47 |
Msa0658480 | Msa1281610 | 0.810788 | 9.685125e-51 | -8.615850e-47 |
Msa1240340 | Msa1281610 | 0.828434 | 9.008788e-55 | -8.615850e-47 |
Msa0439890 | Msa1281610 | 0.810683 | 1.020147e-50 | -8.615850e-47 |
Msa0462880 | Msa1281610 | 0.810884 | 9.232920e-51 | -8.615850e-47 |
Msa0549790 | Msa1281610 | 0.824621 | 7.310832e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1281610 | MtrunA17_Chr8g0352371 | 95.276 | 635 | 8 | 1 | 1 | 613 | 1 | 635 | 0.0 | 1235 |
Msa1281610 | MtrunA17_Chr4g0074481 | 41.711 | 187 | 92 | 3 | 9 | 180 | 48 | 232 | 1.48e-39 | 150 |
Msa1281610 | MtrunA17_Chr0c01g0489601 | 29.139 | 453 | 254 | 14 | 6 | 405 | 210 | 648 | 1.75e-36 | 145 |
Msa1281610 | MtrunA17_Chr5g0431171 | 40.217 | 184 | 102 | 2 | 6 | 181 | 493 | 676 | 5.96e-33 | 135 |
Msa1281610 | MtrunA17_Chr5g0431151 | 40.659 | 182 | 100 | 2 | 8 | 181 | 496 | 677 | 1.79e-30 | 127 |
Msa1281610 | MtrunA17_Chr5g0444711 | 28.105 | 153 | 108 | 2 | 9 | 160 | 91 | 242 | 1.22e-19 | 92.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1281610 | AT2G21470.1 | 69.952 | 619 | 146 | 6 | 4 | 599 | 8 | 609 | 0.0 | 870 |
Msa1281610 | AT2G21470.3 | 69.614 | 622 | 146 | 7 | 4 | 599 | 8 | 612 | 0.0 | 865 |
Msa1281610 | AT2G21470.2 | 75.763 | 524 | 104 | 2 | 4 | 504 | 8 | 531 | 0.0 | 838 |
Msa1281610 | AT5G19180.1 | 37.981 | 208 | 111 | 4 | 6 | 197 | 43 | 248 | 3.26e-39 | 150 |
Msa1281610 | AT5G19180.2 | 37.981 | 208 | 111 | 4 | 6 | 197 | 43 | 248 | 3.58e-39 | 149 |
Msa1281610 | AT5G06460.1 | 39.674 | 184 | 103 | 2 | 6 | 181 | 487 | 670 | 4.00e-32 | 133 |
Msa1281610 | AT2G30110.1 | 40.761 | 184 | 101 | 2 | 6 | 181 | 490 | 673 | 6.76e-30 | 126 |
Msa1281610 | AT5G55130.1 | 29.560 | 159 | 109 | 3 | 3 | 160 | 87 | 243 | 3.87e-18 | 88.2 |
Msa1281610 | AT1G05350.1 | 28.235 | 170 | 96 | 4 | 6 | 154 | 80 | 244 | 5.08e-14 | 75.1 |
Msa1281610 | AT5G55130.2 | 26.950 | 141 | 99 | 3 | 23 | 160 | 77 | 216 | 1.76e-12 | 70.1 |
Msa1281610 | AT5G55130.3 | 26.154 | 130 | 94 | 2 | 32 | 160 | 11 | 139 | 1.52e-11 | 66.6 |
Msa1281610 | AT2G32410.2 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 1.57e-11 | 67.0 |
Msa1281610 | AT2G32410.3 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 2.01e-11 | 66.6 |
Msa1281610 | AT2G32410.1 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 4.31e-11 | 66.2 |
Find 124 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAATATTTGATCACGTATT+TGG | 0.071426 | 8_3:-21300671 | Msa1281610:CDS |
CAATTTAATGTTGTTCTTAA+TGG | 0.121606 | 8_3:-21302468 | Msa1281610:CDS |
GGCGATTCTTTGGCCATAAC+TGG | 0.124317 | 8_3:-21296994 | Msa1281610:three_prime_UTR |
AGTTTCTGCCATGTCATCTT+TGG | 0.181999 | 8_3:-21300498 | Msa1281610:CDS |
AATTTAATGTTGTTCTTAAT+GGG | 0.285173 | 8_3:-21302467 | Msa1281610:CDS |
ATGCTCGATGGGAATTTAGA+TGG | 0.308432 | 8_3:-21297107 | Msa1281610:CDS |
GTAGAGGTTTGGCGATTCTT+TGG | 0.322009 | 8_3:-21297004 | Msa1281610:three_prime_UTR |
TGAAGAACCCGCAAGATATC+TGG | 0.325240 | 8_3:-21300472 | Msa1281610:CDS |
GTTTCTGCCATGTCATCTTT+GGG | 0.331041 | 8_3:-21300497 | Msa1281610:CDS |
GATGAAGACATCAGTCAATA+TGG | 0.334504 | 8_3:-21300698 | Msa1281610:CDS |
AAATATTTGATCACGTATTT+GGG | 0.339346 | 8_3:-21300670 | Msa1281610:CDS |
CTGAAAACTCTTGCTCTCTC+TGG | 0.343099 | 8_3:-21304026 | Msa1281610:CDS |
TCCTTGCTGTATATAGGTTT+AGG | 0.357502 | 8_3:+21300593 | None:intergenic |
AAAATGACATTAAAAGTTAT+AGG | 0.357518 | 8_3:-21300067 | Msa1281610:intron |
AACATACGTGCTGCTTCATT+TGG | 0.360112 | 8_3:-21300209 | Msa1281610:CDS |
TTTGAAGCTAAAGGAATTGC+TGG | 0.366032 | 8_3:-21300167 | Msa1281610:CDS |
ATGGTTGGTGCTGGTGGAAT+TGG | 0.366549 | 8_3:-21304059 | Msa1281610:CDS |
ACAACAAATGCTGTTATTGC+TGG | 0.369447 | 8_3:-21300122 | Msa1281610:CDS |
CATGATTTGTTAGGCTCAAA+TGG | 0.375091 | 8_3:+21298947 | None:intergenic |
CAAACATAACATGATTTGTT+AGG | 0.378706 | 8_3:+21298938 | None:intergenic |
CACTCAACCCTCAATTTCAA+TGG | 0.379525 | 8_3:-21304197 | Msa1281610:exon |
GGATGTCCTGTCTGATGAAT+TGG | 0.379913 | 8_3:-21300573 | Msa1281610:CDS |
GTGTTTATTTCAAGCAATAC+AGG | 0.388272 | 8_3:+21298816 | None:intergenic |
TATGTCTTTGGAGCTGGTTT+AGG | 0.388767 | 8_3:+21301263 | None:intergenic |
AGGACATCCTTGCTGTATAT+AGG | 0.394304 | 8_3:+21300587 | None:intergenic |
GTACAGACTGGATATGTCTT+TGG | 0.400617 | 8_3:+21301251 | None:intergenic |
AACTTCTGTTAACTAATATC+AGG | 0.408324 | 8_3:+21296828 | None:intergenic |
TTAGTTGAAAGTGGAACTAC+TGG | 0.412993 | 8_3:-21302384 | Msa1281610:CDS |
GGATAAACAGAATGGAAATC+TGG | 0.420193 | 8_3:-21300552 | Msa1281610:CDS |
TCACATGTCGCCGTGCATCT+AGG | 0.421302 | 8_3:+21302436 | None:intergenic |
AAACCAACACATACCTTTGA+TGG | 0.425453 | 8_3:+21301215 | None:intergenic |
TAAGACTCCAGATATCTTGC+GGG | 0.426595 | 8_3:+21300465 | None:intergenic |
TCTTTGGCCATAACTGGGTT+AGG | 0.427146 | 8_3:-21296988 | Msa1281610:three_prime_UTR |
AAAATTTATGAGAGAGAAAG+AGG | 0.428612 | 8_3:+21304252 | None:intergenic |
ATATGATGTGATGTTTATCT+TGG | 0.430472 | 8_3:+21302536 | None:intergenic |
ATATTAACTTACTTTAGCCT+TGG | 0.442247 | 8_3:+21302657 | None:intergenic |
AAGAAGTCCACATTGAAATC+AGG | 0.442885 | 8_3:+21302495 | None:intergenic |
GGAAGAAGCCATTGAAATTG+AGG | 0.443022 | 8_3:+21304189 | None:intergenic |
GATGTTCCTTTAGTTGAAAG+TGG | 0.443027 | 8_3:-21302393 | Msa1281610:CDS |
CACAAACCGTTCAAAGTTGA+AGG | 0.445330 | 8_3:-21298796 | Msa1281610:CDS |
GTAGTTCCACTTTCAACTAA+AGG | 0.445658 | 8_3:+21302387 | None:intergenic |
TGTTTCGACAATCCCATGTT+GGG | 0.449554 | 8_3:-21302684 | Msa1281610:CDS |
AACTACTGGGTTCCTTGGTC+AGG | 0.453865 | 8_3:-21302370 | Msa1281610:intron |
TTAGAATGCAAGATCTCAAC+CGG | 0.463025 | 8_3:+21297038 | None:intergenic |
AAGTCTTCAACCAGGTTGCT+AGG | 0.463106 | 8_3:-21302581 | Msa1281610:intron |
ATAAGCAGAGTGTTTCTTGC+TGG | 0.467423 | 8_3:+21298980 | None:intergenic |
ACTGGATATGTCTTTGGAGC+TGG | 0.467879 | 8_3:+21301257 | None:intergenic |
TTAGGCTCAAATGGCTCCAC+TGG | 0.469251 | 8_3:+21298956 | None:intergenic |
CCGCAGAATGACATATTGTC+TGG | 0.471942 | 8_3:-21299008 | Msa1281610:intron |
AAGATCATCAAGGCTAAGCT+TGG | 0.472669 | 8_3:-21298762 | Msa1281610:CDS |
TAATGTTGTTCTTAATGGGC+TGG | 0.473444 | 8_3:-21302463 | Msa1281610:CDS |
CAGCATACCTAACCCAGTTA+TGG | 0.479809 | 8_3:+21296981 | None:intergenic |
TTATAATGCCAACCTTGAAA+AGG | 0.483006 | 8_3:-21298661 | Msa1281610:intron |
CCCGATGGTATGGTTCTCTC+AGG | 0.484251 | 8_3:-21297365 | Msa1281610:CDS |
TTGTGCACGAACTATTAATC+CGG | 0.488584 | 8_3:-21297057 | Msa1281610:three_prime_UTR |
AATGATAATGCTTGTGGCGA+TGG | 0.490650 | 8_3:-21300527 | Msa1281610:CDS |
GTTGAGTGAGAAGAAGTTGA+AGG | 0.494967 | 8_3:+21304212 | None:intergenic |
CAACATCCTTCAACTTTGAA+CGG | 0.496977 | 8_3:+21298790 | None:intergenic |
GACGATCTTGTCATGCTCGA+TGG | 0.502400 | 8_3:-21297119 | Msa1281610:CDS |
GATTGTCATTGAAGCCATCA+AGG | 0.505304 | 8_3:-21300096 | Msa1281610:CDS |
AACCAACACATACCTTTGAT+GGG | 0.507387 | 8_3:+21301216 | None:intergenic |
TATGATGTGATGTTTATCTT+GGG | 0.509688 | 8_3:+21302537 | None:intergenic |
AAAGTTCTCATGGTTGGTGC+TGG | 0.510374 | 8_3:-21304068 | Msa1281610:CDS |
GTTTATCCAATTCATCAGAC+AGG | 0.510714 | 8_3:+21300567 | None:intergenic |
GAAGAAGCCATTGAAATTGA+GGG | 0.511407 | 8_3:+21304190 | None:intergenic |
TGCTCGATGGGAATTTAGAT+GGG | 0.511557 | 8_3:-21297106 | Msa1281610:CDS |
TCAGGATGCAAAAGTTCTCA+TGG | 0.512135 | 8_3:-21304078 | Msa1281610:intron |
CTTTGTCCAATGAGGAGACA+TGG | 0.515275 | 8_3:-21300631 | Msa1281610:CDS |
AGTGGAACTACTGGGTTCCT+TGG | 0.519409 | 8_3:-21302375 | Msa1281610:CDS |
GCGATTCTTTGGCCATAACT+GGG | 0.522360 | 8_3:-21296993 | Msa1281610:three_prime_UTR |
TAACAAATTCTACAGCCAAC+TGG | 0.522537 | 8_3:+21300243 | None:intergenic |
ACGATCTTGTCATGCTCGAT+GGG | 0.524523 | 8_3:-21297118 | Msa1281610:CDS |
TTCGACTTATCAGAATCATC+AGG | 0.526169 | 8_3:+21297194 | None:intergenic |
AGATCATCAAGGCTAAGCTT+GGG | 0.526278 | 8_3:-21298761 | Msa1281610:CDS |
GTTCTCATGGTTGGTGCTGG+TGG | 0.527023 | 8_3:-21304065 | Msa1281610:CDS |
TTGTTTCGACAATCCCATGT+TGG | 0.531431 | 8_3:-21302685 | Msa1281610:CDS |
AGAGAAAGAACCCGATGGTA+TGG | 0.532728 | 8_3:-21297375 | Msa1281610:CDS |
TCTGAAAATGATGATGATGT+TGG | 0.533388 | 8_3:-21297248 | Msa1281610:CDS |
AGTCTTCAACCAGGTTGCTA+GGG | 0.533554 | 8_3:-21302580 | Msa1281610:intron |
CTATGAAGCTGGTGATATTG+AGG | 0.533747 | 8_3:-21298700 | Msa1281610:CDS |
ACATGTGAATCGTTTGTGCT+TGG | 0.533993 | 8_3:-21302421 | Msa1281610:CDS |
GATGAATTGGATAAACAGAA+TGG | 0.535107 | 8_3:-21300560 | Msa1281610:CDS |
TCAAACCTCCTCTATGAAGC+TGG | 0.536148 | 8_3:-21298711 | Msa1281610:CDS |
TGCTGTTATTGGTGCGTCTG+AGG | 0.548448 | 8_3:+21297280 | None:intergenic |
TGAATTAGCTTTGTCCAATG+AGG | 0.549430 | 8_3:-21300639 | Msa1281610:CDS |
CTAAGACTCCAGATATCTTG+CGG | 0.551875 | 8_3:+21300464 | None:intergenic |
ATCATGTTATGTTTGTTCTG+AGG | 0.560644 | 8_3:-21298930 | Msa1281610:intron |
TCCTGAGAGAACCATACCAT+CGG | 0.562714 | 8_3:+21297364 | None:intergenic |
TTTGAAGCATTCATGACAAG+TGG | 0.563218 | 8_3:+21298729 | None:intergenic |
CAGGTTACAGTTCATGTCAA+AGG | 0.563874 | 8_3:-21301311 | Msa1281610:CDS |
ATGGTATGGTTCTCTCAGGA+TGG | 0.566193 | 8_3:-21297361 | Msa1281610:CDS |
AGCCTTGGACTGCCCAACAT+GGG | 0.567033 | 8_3:+21302672 | None:intergenic |
GCAACATTAACATAAAGCAC+AGG | 0.567973 | 8_3:-21297548 | Msa1281610:intron |
TGATGTTGGTATAATTTCTC+CGG | 0.575254 | 8_3:-21297234 | Msa1281610:CDS |
CTTCATGCCCAAAGATGACA+TGG | 0.576049 | 8_3:+21300490 | None:intergenic |
CCTGAGAGAACCATACCATC+GGG | 0.576818 | 8_3:+21297365 | None:intergenic |
ATCCCATGTTGGGCAGTCCA+AGG | 0.579418 | 8_3:-21302674 | Msa1281610:CDS |
GTTTGTTCACTGTATTGTGT+GGG | 0.580513 | 8_3:-21300843 | Msa1281610:CDS |
AAATTTATGAGAGAGAAAGA+GGG | 0.580793 | 8_3:+21304253 | None:intergenic |
TAGCCTTGGACTGCCCAACA+TGG | 0.585558 | 8_3:+21302671 | None:intergenic |
CAATATCACCAGCTTCATAG+AGG | 0.585950 | 8_3:+21298703 | None:intergenic |
CGAATACTGCTGATGACGAA+AGG | 0.587119 | 8_3:-21297175 | Msa1281610:CDS |
AAGCATTCATGACAAGTGGA+AGG | 0.592994 | 8_3:+21298733 | None:intergenic |
GGCTGGACAACCTAGATGCA+CGG | 0.596414 | 8_3:-21302446 | Msa1281610:CDS |
GAAGACAAATCTGTTAGTAA+CGG | 0.601754 | 8_3:-21297311 | Msa1281610:CDS |
AGTTTGTTCACTGTATTGTG+TGG | 0.604544 | 8_3:-21300844 | Msa1281610:CDS |
TATCACAAGTACCCCATCAA+AGG | 0.606863 | 8_3:-21301228 | Msa1281610:intron |
TATCACCAGCTTCATAGAGG+AGG | 0.611607 | 8_3:+21298706 | None:intergenic |
GATGCAAAAGTTCTCATGGT+TGG | 0.612790 | 8_3:-21304074 | Msa1281610:CDS |
TCCCAATGTGCAGATTGACA+TGG | 0.629164 | 8_3:-21302743 | Msa1281610:intron |
TGTTGTCGAAAAGATCATCA+AGG | 0.630051 | 8_3:-21298772 | Msa1281610:CDS |
ACAATTAAATTACCTGACCA+AGG | 0.630077 | 8_3:+21302358 | None:intergenic |
TAGTTGAAAGTGGAACTACT+GGG | 0.633402 | 8_3:-21302383 | Msa1281610:CDS |
GTACTTGTGATAGTACAGAC+TGG | 0.633652 | 8_3:+21301239 | None:intergenic |
ACCTAAACCTATATACAGCA+AGG | 0.641211 | 8_3:-21300594 | Msa1281610:CDS |
AAACACTCTGCTTATGCCAG+TGG | 0.641266 | 8_3:-21298972 | Msa1281610:CDS |
ACCAACACATACCTTTGATG+GGG | 0.643072 | 8_3:+21301217 | None:intergenic |
CTTTGATAAAGATGACCAGT+TGG | 0.646072 | 8_3:-21300258 | Msa1281610:CDS |
CTTGCTGACTTCTGACAGAG+AGG | 0.646332 | 8_3:-21296882 | Msa1281610:three_prime_UTR |
CTGGACAATGATAATGCTTG+TGG | 0.650177 | 8_3:-21300533 | Msa1281610:CDS |
TGGTAACATTGTGCATGCTG+TGG | 0.672395 | 8_3:-21300147 | Msa1281610:CDS |
GATGAAGAGAAAGAACCCGA+TGG | 0.685104 | 8_3:-21297380 | Msa1281610:CDS |
CAAAGATCCTGATTTCAATG+TGG | 0.694264 | 8_3:-21302502 | Msa1281610:CDS |
TGGTGATATTGAGGATGACA+TGG | 0.698545 | 8_3:-21298691 | Msa1281610:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTGAAATTTTGAATTT+TGG | - | chr8_3:21297064-21297083 | Msa1281610:exon | 10.0% |
!! | AGTATATAATATAATTACTA+TGG | + | chr8_3:21299465-21299484 | None:intergenic | 10.0% |
!!! | TTTTGTGATATAATTTTTAT+TGG | - | chr8_3:21299666-21299685 | Msa1281610:intron | 10.0% |
!! | TATATATGAATTTCTAAATT+TGG | - | chr8_3:21303245-21303264 | Msa1281610:intron | 10.0% |
!! | AGTAAAAATTACTTTGATAA+TGG | + | chr8_3:21296838-21296857 | None:intergenic | 15.0% |
!!! | TTTGAATTTTGGTTTTTTTT+AGG | - | chr8_3:21297075-21297094 | Msa1281610:exon | 15.0% |
!!! | TTGAATTTTGGTTTTTTTTA+GGG | - | chr8_3:21297076-21297095 | Msa1281610:exon | 15.0% |
!!! | TTTTAATTAAATTGTTGTAC+TGG | - | chr8_3:21297324-21297343 | Msa1281610:CDS | 15.0% |
!!! | ATAAGACTCATTTTAATTAA+GGG | - | chr8_3:21297652-21297671 | Msa1281610:intron | 15.0% |
!! | AATTTAATGTTGTTCTTAAT+GGG | - | chr8_3:21298536-21298555 | Msa1281610:intron | 15.0% |
!!! | ATATAATTTTTATTGGAAAC+AGG | - | chr8_3:21299673-21299692 | Msa1281610:intron | 15.0% |
!! | AAAATGACATTAAAAGTTAT+AGG | - | chr8_3:21300936-21300955 | Msa1281610:intron | 15.0% |
!!! | GTTATTTGGATTTATTTTAT+AGG | - | chr8_3:21301293-21301312 | Msa1281610:CDS | 15.0% |
!!! | GAAAATTCTAAAAATATGTT+TGG | + | chr8_3:21301822-21301841 | None:intergenic | 15.0% |
!!! | TACTTCCTTTTTGTTTTTTT+AGG | - | chr8_3:21297025-21297044 | Msa1281610:three_prime_UTR | 20.0% |
!!! | ACTTCCTTTTTGTTTTTTTA+GGG | - | chr8_3:21297026-21297045 | Msa1281610:three_prime_UTR | 20.0% |
!! | AAAACCCTAAAAAAACAAAA+AGG | + | chr8_3:21297033-21297052 | None:intergenic | 20.0% |
!!! | TAGTAAAGTTTTGAACTTTA+TGG | - | chr8_3:21297130-21297149 | Msa1281610:CDS | 20.0% |
!!! | AGTAAAGTTTTGAACTTTAT+GGG | - | chr8_3:21297131-21297150 | Msa1281610:CDS | 20.0% |
!!! | AACTGTTTTGAGTTTTTAAT+TGG | - | chr8_3:21297273-21297292 | Msa1281610:CDS | 20.0% |
!!! | ACTCTATTGTTTGTTTTAAT+TGG | - | chr8_3:21297411-21297430 | Msa1281610:intron | 20.0% |
!!! | CTCTATTGTTTGTTTTAATT+GGG | - | chr8_3:21297412-21297431 | Msa1281610:intron | 20.0% |
!!! | TCTATTGTTTGTTTTAATTG+GGG | - | chr8_3:21297413-21297432 | Msa1281610:intron | 20.0% |
!!! | TTTTTTGGTATTGGATTTTA+AGG | - | chr8_3:21297440-21297459 | Msa1281610:intron | 20.0% |
!!! | GATAAGACTCATTTTAATTA+AGG | - | chr8_3:21297651-21297670 | Msa1281610:intron | 20.0% |
!! | TATATTAACCCTGTTATTAT+TGG | - | chr8_3:21297716-21297735 | Msa1281610:intron | 20.0% |
!! | ATATTAACCCTGTTATTATT+GGG | - | chr8_3:21297717-21297736 | Msa1281610:intron | 20.0% |
!! | CAATTTAATGTTGTTCTTAA+TGG | - | chr8_3:21298535-21298554 | Msa1281610:intron | 20.0% |
!! | GGTAATTTAATTGTAGTTAT+TGG | - | chr8_3:21298654-21298673 | Msa1281610:intron | 20.0% |
!!! | TCACATTGATAACAAATTTT+AGG | + | chr8_3:21298859-21298878 | None:intergenic | 20.0% |
!!! | ATGTCAAAAGAAACATATTT+TGG | + | chr8_3:21298935-21298954 | None:intergenic | 20.0% |
!! | TGAATAGAAATTAAGAATTC+AGG | + | chr8_3:21298986-21299005 | None:intergenic | 20.0% |
!! | AGATATATCTATTTCCATAT+AGG | - | chr8_3:21299125-21299144 | Msa1281610:intron | 20.0% |
!! | GATATATCTATTTCCATATA+GGG | - | chr8_3:21299126-21299145 | Msa1281610:intron | 20.0% |
!! | ATATATCTATTTCCATATAG+GGG | - | chr8_3:21299127-21299146 | Msa1281610:intron | 20.0% |
!! | AGTATTAAGTAAATTCTGAA+TGG | - | chr8_3:21299161-21299180 | Msa1281610:intron | 20.0% |
!!! | GATAACAGATTTTATCAAAT+AGG | + | chr8_3:21299223-21299242 | None:intergenic | 20.0% |
!! | TATTGCAATTAAAATCATGT+GGG | + | chr8_3:21299605-21299624 | None:intergenic | 20.0% |
!! | ATATTGCAATTAAAATCATG+TGG | + | chr8_3:21299606-21299625 | None:intergenic | 20.0% |
!! | AAATTTCTATGTATGAACTA+CGG | + | chr8_3:21299866-21299885 | None:intergenic | 20.0% |
!!! | AGTTCATACATAGAAATTTT+AGG | - | chr8_3:21299867-21299886 | Msa1281610:intron | 20.0% |
!! | ACATTCAAGAAAAATCTAAA+TGG | + | chr8_3:21299903-21299922 | None:intergenic | 20.0% |
!!! | CTACTATTTTCTAAGTTATT+TGG | - | chr8_3:21300191-21300210 | Msa1281610:CDS | 20.0% |
!! | AAAATATTTGATCACGTATT+TGG | - | chr8_3:21300332-21300351 | Msa1281610:intron | 20.0% |
!! | AAATATTTGATCACGTATTT+GGG | - | chr8_3:21300333-21300352 | Msa1281610:intron | 20.0% |
!!! | ATTTTTCACAAAAAGAGAAA+AGG | - | chr8_3:21300598-21300617 | Msa1281610:CDS | 20.0% |
!! | GATACATCAAAAGAAATAAA+AGG | + | chr8_3:21300698-21300717 | None:intergenic | 20.0% |
!! | ATCTTATGTTATCAAATAGT+TGG | - | chr8_3:21301494-21301513 | Msa1281610:intron | 20.0% |
!!! | TTGTTATTGATTCTAACAAA+TGG | - | chr8_3:21301599-21301618 | Msa1281610:intron | 20.0% |
!!! | GTTACCATTTAATAGTTTTA+AGG | + | chr8_3:21301800-21301819 | None:intergenic | 20.0% |
!! | ATCAAAGAAAATACTATTCA+CGG | + | chr8_3:21301871-21301890 | None:intergenic | 20.0% |
!!! | GCTTTTATTCTAATCTTATT+TGG | - | chr8_3:21301967-21301986 | Msa1281610:intron | 20.0% |
!!! | GAAGATTTTCAATAATCAAT+GGG | + | chr8_3:21302781-21302800 | None:intergenic | 20.0% |
!!! | ATCAAGTTTTAATGTTGATA+TGG | - | chr8_3:21302939-21302958 | Msa1281610:intron | 20.0% |
!!! | TTTCTTTTCTTTTTATGTTC+TGG | - | chr8_3:21303004-21303023 | Msa1281610:intron | 20.0% |
!!! | TTCTTTTCTTTTTATGTTCT+GGG | - | chr8_3:21303005-21303024 | Msa1281610:intron | 20.0% |
!! | TATGAATTTCTAAATTTGGT+AGG | - | chr8_3:21303249-21303268 | Msa1281610:intron | 20.0% |
!! | AACAGGAAAAAATAAACATT+AGG | + | chr8_3:21303553-21303572 | None:intergenic | 20.0% |
!!! | TTGCATTCTAATTTTGTATT+TGG | - | chr8_3:21303977-21303996 | Msa1281610:intron | 20.0% |
! | AAATTTATGAGAGAGAAAGA+GGG | + | chr8_3:21296753-21296772 | None:intergenic | 25.0% |
! | AAAATTTATGAGAGAGAAAG+AGG | + | chr8_3:21296754-21296773 | None:intergenic | 25.0% |
!!! | CATGTTTTTAATGTCGTTTT+GGG | - | chr8_3:21296895-21296914 | Msa1281610:three_prime_UTR | 25.0% |
!!! | TAAGGTGTTTTGTTTTAGTA+AGG | - | chr8_3:21297458-21297477 | Msa1281610:intron | 25.0% |
! | TTCACAATAATTGTGTGTTT+AGG | - | chr8_3:21297494-21297513 | Msa1281610:intron | 25.0% |
!!! | TTGACTTTACTTGCTTTTTT+TGG | - | chr8_3:21297544-21297563 | Msa1281610:intron | 25.0% |
!!! | TACTTGCTTTTTTTGGTAAT+TGG | - | chr8_3:21297551-21297570 | Msa1281610:CDS | 25.0% |
!! | AGGGTTAATATATGCTTTTA+CGG | + | chr8_3:21297708-21297727 | None:intergenic | 25.0% |
! | TATTAACCCTGTTATTATTG+GGG | - | chr8_3:21297718-21297737 | Msa1281610:intron | 25.0% |
!!! | CAATGTTTTAATAACTGAAC+CGG | - | chr8_3:21297749-21297768 | Msa1281610:intron | 25.0% |
! | CACATACATCATTTATTGAA+TGG | + | chr8_3:21297985-21298004 | None:intergenic | 25.0% |
! | CATTCAATAAATGATGTATG+TGG | - | chr8_3:21297983-21298002 | Msa1281610:intron | 25.0% |
! | CATTGAATAAATGATGTACA+TGG | + | chr8_3:21298022-21298041 | None:intergenic | 25.0% |
!!! | TGCAGTCTTTTAATTTATTC+TGG | + | chr8_3:21298145-21298164 | None:intergenic | 25.0% |
!! | TTTCTTTTGAATTATCTACG+TGG | - | chr8_3:21298191-21298210 | Msa1281610:intron | 25.0% |
! | ATATTAACTTACTTTAGCCT+TGG | + | chr8_3:21298349-21298368 | None:intergenic | 25.0% |
! | TATACAAGTAACTAGAATGT+CGG | + | chr8_3:21298376-21298395 | None:intergenic | 25.0% |
! | TATGATGTGATGTTTATCTT+GGG | + | chr8_3:21298469-21298488 | None:intergenic | 25.0% |
! | ATATGATGTGATGTTTATCT+TGG | + | chr8_3:21298470-21298489 | None:intergenic | 25.0% |
! | ATGTCTTATGACTAGATAAT+CGG | - | chr8_3:21299264-21299283 | Msa1281610:intron | 25.0% |
!!! | TGATTATCCTCTAAAATTTC+AGG | - | chr8_3:21299379-21299398 | Msa1281610:intron | 25.0% |
!!! | GATTATCCTCTAAAATTTCA+GGG | - | chr8_3:21299380-21299399 | Msa1281610:intron | 25.0% |
!!! | ATTATCCTCTAAAATTTCAG+GGG | - | chr8_3:21299381-21299400 | Msa1281610:intron | 25.0% |
!!! | TATATACTATTGACTTGTTC+TGG | - | chr8_3:21299477-21299496 | Msa1281610:intron | 25.0% |
! | AAAAATCATTCAGTGCATAA+AGG | + | chr8_3:21299815-21299834 | None:intergenic | 25.0% |
!! | AATTCCTTGTTATATCTTTG+TGG | - | chr8_3:21299932-21299951 | Msa1281610:intron | 25.0% |
! | AATAATCATATATCTCCATC+TGG | - | chr8_3:21300658-21300677 | Msa1281610:CDS | 25.0% |
!!! | TAGATACTAACAGACTTTTT+TGG | - | chr8_3:21301100-21301119 | Msa1281610:intron | 25.0% |
! | TACATGTAAGAATTTACTCT+CGG | - | chr8_3:21301165-21301184 | Msa1281610:intron | 25.0% |
!! | AATTATAGTTGAAGTACTTG+AGG | - | chr8_3:21301270-21301289 | Msa1281610:CDS | 25.0% |
!! | ATTATAGTTGAAGTACTTGA+GGG | - | chr8_3:21301271-21301290 | Msa1281610:CDS | 25.0% |
! | TTATAGGCAATTTAAATAGC+TGG | - | chr8_3:21301309-21301328 | Msa1281610:CDS | 25.0% |
! | CTAAAATCAAAAAGAGAATG+AGG | + | chr8_3:21301458-21301477 | None:intergenic | 25.0% |
! | TTGTTAGAATCAATAACAAC+AGG | + | chr8_3:21301598-21301617 | None:intergenic | 25.0% |
! | AGCTCCTTAAAACTATTAAA+TGG | - | chr8_3:21301793-21301812 | Msa1281610:intron | 25.0% |
! | TTAGAACAGAATTTATTCTC+GGG | + | chr8_3:21301844-21301863 | None:intergenic | 25.0% |
! | CTTAGAACAGAATTTATTCT+CGG | + | chr8_3:21301845-21301864 | None:intergenic | 25.0% |
!!! | CAAACATAACATGATTTGTT+AGG | + | chr8_3:21302068-21302087 | None:intergenic | 25.0% |
!! | TTTAAAGTACTAGTTGAGAA+AGG | + | chr8_3:21302112-21302131 | None:intergenic | 25.0% |
!!! | TTCTTTAACCATTTTTACCA+TGG | - | chr8_3:21302404-21302423 | Msa1281610:CDS | 25.0% |
! | TTTCAGAAATCCAGATATTT+CGG | - | chr8_3:21302645-21302664 | Msa1281610:intron | 25.0% |
!!! | AAAATTGTTTTTAGCGATGT+GGG | + | chr8_3:21302684-21302703 | None:intergenic | 25.0% |
!!! | AAAAATTGTTTTTAGCGATG+TGG | + | chr8_3:21302685-21302704 | None:intergenic | 25.0% |
!!! | ACAATTTTTTGCTATCAGAA+AGG | - | chr8_3:21302696-21302715 | Msa1281610:CDS | 25.0% |
!! | ATAATCAATGGGTTTAATGA+GGG | + | chr8_3:21302770-21302789 | None:intergenic | 25.0% |
!! | AATAATCAATGGGTTTAATG+AGG | + | chr8_3:21302771-21302790 | None:intergenic | 25.0% |
!! | GGAAGATTTTCAATAATCAA+TGG | + | chr8_3:21302782-21302801 | None:intergenic | 25.0% |
!!! | TTATTGATAGTGGCTTTATT+GGG | + | chr8_3:21302803-21302822 | None:intergenic | 25.0% |
!!! | ATTATTGATAGTGGCTTTAT+TGG | + | chr8_3:21302804-21302823 | None:intergenic | 25.0% |
! | TAAAGCCACTATCAATAATT+AGG | - | chr8_3:21302805-21302824 | Msa1281610:intron | 25.0% |
! | AAAGCCACTATCAATAATTA+GGG | - | chr8_3:21302806-21302825 | Msa1281610:intron | 25.0% |
! | ATTTCCCTAATTATTGATAG+TGG | + | chr8_3:21302813-21302832 | None:intergenic | 25.0% |
! | CTTGATCATAATTATCTCAA+TGG | + | chr8_3:21302925-21302944 | None:intergenic | 25.0% |
!!! | ACATCTTTAAAACTCCAAAA+CGG | + | chr8_3:21303079-21303098 | None:intergenic | 25.0% |
! | GAACAGAATAGTAAAAATCA+AGG | + | chr8_3:21303357-21303376 | None:intergenic | 25.0% |
!! | TGATTTTTACTATTCTGTTC+AGG | - | chr8_3:21303357-21303376 | Msa1281610:intron | 25.0% |
! | AGAAAACAATTCAGAATAAC+AGG | + | chr8_3:21303570-21303589 | None:intergenic | 25.0% |
!! | TCTGAATTGTTTTCTTTTGT+TGG | - | chr8_3:21303575-21303594 | Msa1281610:intron | 25.0% |
!! | TCTAATTTTGTATTTGGTAG+AGG | - | chr8_3:21303983-21304002 | Msa1281610:intron | 25.0% |
! | AACTTCTGTTAACTAATATC+AGG | + | chr8_3:21304178-21304197 | None:intergenic | 25.0% |
!! | TTAACAGAAGTTTTGCAAAT+TGG | - | chr8_3:21304186-21304205 | Msa1281610:exon | 25.0% |
!! | GCATGTTTTTAATGTCGTTT+TGG | - | chr8_3:21296894-21296913 | Msa1281610:three_prime_UTR | 30.0% |
!! | ACTTTATGGGTTTTGTCAAA+TGG | - | chr8_3:21297144-21297163 | Msa1281610:CDS | 30.0% |
!! | CTTTATGGGTTTTGTCAAAT+GGG | - | chr8_3:21297145-21297164 | Msa1281610:CDS | 30.0% |
AACCACAAATCAGATCAAAA+GGG | + | chr8_3:21297373-21297392 | None:intergenic | 30.0% | |
!!! | TTTAATTGGGGAGAGTTTTT+TGG | - | chr8_3:21297425-21297444 | Msa1281610:intron | 30.0% |
!! | TGTGTTTAGGTTGAAATGTT+TGG | - | chr8_3:21297507-21297526 | Msa1281610:intron | 30.0% |
!! | GTGTTTAGGTTGAAATGTTT+GGG | - | chr8_3:21297508-21297527 | Msa1281610:intron | 30.0% |
!!! | CTTTTTTTGGTAATTGGTGT+TGG | - | chr8_3:21297557-21297576 | Msa1281610:CDS | 30.0% |
! | TAGGGTATTTAGTACATGTT+TGG | - | chr8_3:21297592-21297611 | Msa1281610:intron | 30.0% |
ATTTAGTACATGTTTGGTTG+TGG | - | chr8_3:21297598-21297617 | Msa1281610:intron | 30.0% | |
ATTAACCCTGTTATTATTGG+GGG | - | chr8_3:21297719-21297738 | Msa1281610:intron | 30.0% | |
CGGTTCAGTTATTAAAACAT+TGG | + | chr8_3:21297751-21297770 | None:intergenic | 30.0% | |
ATGGTTCAACAACTTTAACT+CGG | - | chr8_3:21297796-21297815 | Msa1281610:intron | 30.0% | |
CAATGATTTAAAAACCAACC+CGG | + | chr8_3:21297907-21297926 | None:intergenic | 30.0% | |
! | TTTTTGCGTATAATAGTGAC+CGG | - | chr8_3:21298057-21298076 | Msa1281610:intron | 30.0% |
! | GACATTCTAGTTACTTGTAT+AGG | - | chr8_3:21298375-21298394 | Msa1281610:intron | 30.0% |
!!! | GGGATGCTGTTTTAAAATTT+AGG | - | chr8_3:21298443-21298462 | Msa1281610:intron | 30.0% |
ACAATTAAATTACCTGACCA+AGG | + | chr8_3:21298648-21298667 | None:intergenic | 30.0% | |
!! | AATTGTAGTTATTGGCTTCT+TGG | - | chr8_3:21298662-21298681 | Msa1281610:CDS | 30.0% |
TAGATAATCAATCTTTCGAG+TGG | - | chr8_3:21298905-21298924 | Msa1281610:intron | 30.0% | |
! | AGATAATCAATCTTTCGAGT+GGG | - | chr8_3:21298906-21298925 | Msa1281610:intron | 30.0% |
! | GTGTGTAGTTATTGTTTTCT+TGG | - | chr8_3:21299100-21299119 | Msa1281610:intron | 30.0% |
ATAGAAACAGTATGAAGAAG+AGG | + | chr8_3:21299410-21299429 | None:intergenic | 30.0% | |
!!! | TTTTTTACCTCCTAGTTTTG+TGG | - | chr8_3:21299525-21299544 | Msa1281610:intron | 30.0% |
CATAGAACATATGATGCAAT+AGG | - | chr8_3:21299839-21299858 | Msa1281610:intron | 30.0% | |
!! | TAGAAATTTTAGGCATTGCA+TGG | - | chr8_3:21299877-21299896 | Msa1281610:intron | 30.0% |
TGATCCACAAAGATATAACA+AGG | + | chr8_3:21299939-21299958 | None:intergenic | 30.0% | |
ATATAACTAATGAGTGCCTT+CGG | + | chr8_3:21299997-21300016 | None:intergenic | 30.0% | |
TGTCAAATTGAACATCAACT+AGG | - | chr8_3:21300064-21300083 | Msa1281610:intron | 30.0% | |
GATGAATTGGATAAACAGAA+TGG | - | chr8_3:21300443-21300462 | Msa1281610:CDS | 30.0% | |
TTCACAAAAAGAGAAAAGGT+TGG | - | chr8_3:21300602-21300621 | Msa1281610:CDS | 30.0% | |
! | TTTTGATGTATCTTTTGAGC+AGG | - | chr8_3:21300706-21300725 | Msa1281610:CDS | 30.0% |
GCTTCAAAAAGACTATGTAA+AGG | + | chr8_3:21300824-21300843 | None:intergenic | 30.0% | |
!!! | CATAGTCTTTTTGAAGCTAA+AGG | - | chr8_3:21300827-21300846 | Msa1281610:CDS | 30.0% |
AAAGTCTGTTAGTATCTAGA+AGG | + | chr8_3:21301098-21301117 | None:intergenic | 30.0% | |
!!! | ATACTAACAGACTTTTTTGG+TGG | - | chr8_3:21301103-21301122 | Msa1281610:intron | 30.0% |
TGAATCATGAATGTAAGCTA+AGG | + | chr8_3:21301373-21301392 | None:intergenic | 30.0% | |
CTGCATAAACTGAAAATAAC+AGG | + | chr8_3:21301427-21301446 | None:intergenic | 30.0% | |
ACAACAGGACTATTATTTCA+AGG | + | chr8_3:21301583-21301602 | None:intergenic | 30.0% | |
! | AGTGATATCATGTTTTTCCA+TGG | - | chr8_3:21301664-21301683 | Msa1281610:intron | 30.0% |
! | GTGATATCATGTTTTTCCAT+GGG | - | chr8_3:21301665-21301684 | Msa1281610:intron | 30.0% |
ATCATGTTATGTTTGTTCTG+AGG | - | chr8_3:21302073-21302092 | Msa1281610:intron | 30.0% | |
GTGTTTATTTCAAGCAATAC+AGG | + | chr8_3:21302190-21302209 | None:intergenic | 30.0% | |
TTATAATGCCAACCTTGAAA+AGG | - | chr8_3:21302342-21302361 | Msa1281610:intron | 30.0% | |
!! | AAAAGAAGCATACCTTTTCA+AGG | + | chr8_3:21302357-21302376 | None:intergenic | 30.0% |
! | AAGGTATGCTTCTTTTCTTT+TGG | - | chr8_3:21302361-21302380 | Msa1281610:intron | 30.0% |
TTTGTCTACCATGGTAAAAA+TGG | + | chr8_3:21302415-21302434 | None:intergenic | 30.0% | |
TTCAGAAATCCAGATATTTC+GGG | - | chr8_3:21302646-21302665 | Msa1281610:intron | 30.0% | |
!! | ACTCTTCTTTTTCTCTGAAA+CGG | - | chr8_3:21302735-21302754 | Msa1281610:intron | 30.0% |
TTCCATTGGTAAGGATTTAT+GGG | + | chr8_3:21302847-21302866 | None:intergenic | 30.0% | |
ATTCCATTGGTAAGGATTTA+TGG | + | chr8_3:21302848-21302867 | None:intergenic | 30.0% | |
TATGAATATGGGAATTCCAT+TGG | + | chr8_3:21302861-21302880 | None:intergenic | 30.0% | |
GAAGACAAATCTGTTAGTAA+CGG | - | chr8_3:21303692-21303711 | Msa1281610:intron | 30.0% | |
! | GATTTTTCTACTGCTGTTAT+TGG | + | chr8_3:21303737-21303756 | None:intergenic | 30.0% |
! | TCTGAAAATGATGATGATGT+TGG | - | chr8_3:21303755-21303774 | Msa1281610:intron | 30.0% |
TGATGTTGGTATAATTTCTC+CGG | - | chr8_3:21303769-21303788 | Msa1281610:intron | 30.0% | |
! | TTTTGTATTTGGTAGAGGTT+TGG | - | chr8_3:21303988-21304007 | Msa1281610:intron | 30.0% |
GAAGAAGCCATTGAAATTGA+GGG | + | chr8_3:21296816-21296835 | None:intergenic | 35.0% | |
! | TTAGGGTTTTCTTCTGTACT+TGG | - | chr8_3:21297093-21297112 | Msa1281610:CDS | 35.0% |
! | TAGGGTTTTCTTCTGTACTT+GGG | - | chr8_3:21297094-21297113 | Msa1281610:CDS | 35.0% |
CAAACTGAAACGCGAAATTA+TGG | + | chr8_3:21297176-21297195 | None:intergenic | 35.0% | |
CATAATTTCGCGTTTCAGTT+TGG | - | chr8_3:21297174-21297193 | Msa1281610:CDS | 35.0% | |
!! | TTCCCTTTTGATCTGATTTG+TGG | - | chr8_3:21297368-21297387 | Msa1281610:CDS | 35.0% |
CAACCACAAATCAGATCAAA+AGG | + | chr8_3:21297374-21297393 | None:intergenic | 35.0% | |
!! | CTTTTGATCTGATTTGTGGT+TGG | - | chr8_3:21297372-21297391 | Msa1281610:CDS | 35.0% |
! | ATTAAGGGTAGTTTGTAGTG+TGG | - | chr8_3:21297667-21297686 | Msa1281610:intron | 35.0% |
ACTAACCCCCAATAATAACA+GGG | + | chr8_3:21297727-21297746 | None:intergenic | 35.0% | |
TACTAACCCCCAATAATAAC+AGG | + | chr8_3:21297728-21297747 | None:intergenic | 35.0% | |
TTATTTGAACAGTTCAACCG+TGG | + | chr8_3:21297838-21297857 | None:intergenic | 35.0% | |
TCAAATAACCAAACCGTAGA+CGG | - | chr8_3:21297850-21297869 | Msa1281610:intron | 35.0% | |
!!! | CGGGTTGGTTTTTAAATCAT+TGG | - | chr8_3:21297905-21297924 | Msa1281610:intron | 35.0% |
AATGTAATAAAGCGCATCCA+TGG | + | chr8_3:21298224-21298243 | None:intergenic | 35.0% | |
GAAACAAAAACTGTCTGTTC+AGG | + | chr8_3:21298305-21298324 | None:intergenic | 35.0% | |
TGGTTGAAGACTTAATCAGA+TGG | + | chr8_3:21298415-21298434 | None:intergenic | 35.0% | |
ATCTGATTAAGTCTTCAACC+AGG | - | chr8_3:21298414-21298433 | Msa1281610:intron | 35.0% | |
CAAAGATCCTGATTTCAATG+TGG | - | chr8_3:21298501-21298520 | Msa1281610:intron | 35.0% | |
AAGAAGTCCACATTGAAATC+AGG | + | chr8_3:21298511-21298530 | None:intergenic | 35.0% | |
! | TAATGTTGTTCTTAATGGGC+TGG | - | chr8_3:21298540-21298559 | Msa1281610:intron | 35.0% |
GATGTTCCTTTAGTTGAAAG+TGG | - | chr8_3:21298610-21298629 | Msa1281610:intron | 35.0% | |
GTAGTTCCACTTTCAACTAA+AGG | + | chr8_3:21298619-21298638 | None:intergenic | 35.0% | |
TTAGTTGAAAGTGGAACTAC+TGG | - | chr8_3:21298619-21298638 | Msa1281610:intron | 35.0% | |
TAGTTGAAAGTGGAACTACT+GGG | - | chr8_3:21298620-21298639 | Msa1281610:intron | 35.0% | |
!!! | TTGTGTTTTTTCTTGCTCGA+TGG | - | chr8_3:21298767-21298786 | Msa1281610:CDS | 35.0% |
TAGATAATCGGTCTTCTGAT+TGG | - | chr8_3:21299276-21299295 | Msa1281610:intron | 35.0% | |
AGATAATCGGTCTTCTGATT+GGG | - | chr8_3:21299277-21299296 | Msa1281610:intron | 35.0% | |
GAAGACATGAAGTATGTCAA+AGG | + | chr8_3:21299319-21299338 | None:intergenic | 35.0% | |
GTGAATAGAGATTAAGAGCT+CGG | + | chr8_3:21299359-21299378 | None:intergenic | 35.0% | |
AACCAACACATACCTTTGAT+GGG | + | chr8_3:21299790-21299809 | None:intergenic | 35.0% | |
AAACCAACACATACCTTTGA+TGG | + | chr8_3:21299791-21299810 | None:intergenic | 35.0% | |
! | AGTTTGTTCACTGTATTGTG+TGG | - | chr8_3:21300159-21300178 | Msa1281610:CDS | 35.0% |
GTTTGTTCACTGTATTGTGT+GGG | - | chr8_3:21300160-21300179 | Msa1281610:CDS | 35.0% | |
!!! | CTCTATGTTTTTTGATGAGC+TGG | + | chr8_3:21300264-21300283 | None:intergenic | 35.0% |
CAGCTCATCAAAAAACATAG+AGG | - | chr8_3:21300262-21300281 | Msa1281610:CDS | 35.0% | |
GATGAAGACATCAGTCAATA+TGG | - | chr8_3:21300305-21300324 | Msa1281610:intron | 35.0% | |
!! | TGAATTAGCTTTGTCCAATG+AGG | - | chr8_3:21300364-21300383 | Msa1281610:intron | 35.0% |
! | ATTTTTCCATGTCTCCTCAT+TGG | + | chr8_3:21300381-21300400 | None:intergenic | 35.0% |
ACCTAAACCTATATACAGCA+AGG | - | chr8_3:21300409-21300428 | Msa1281610:CDS | 35.0% | |
! | TCCTTGCTGTATATAGGTTT+AGG | + | chr8_3:21300413-21300432 | None:intergenic | 35.0% |
GTTTATCCAATTCATCAGAC+AGG | + | chr8_3:21300439-21300458 | None:intergenic | 35.0% | |
GGATAAACAGAATGGAAATC+TGG | - | chr8_3:21300451-21300470 | Msa1281610:CDS | 35.0% | |
ATCTCCATCTGGAAACTTAA+CGG | - | chr8_3:21300669-21300688 | Msa1281610:CDS | 35.0% | |
! | GTATCTTTTGAGCAGGATAT+TGG | - | chr8_3:21300713-21300732 | Msa1281610:CDS | 35.0% |
CTTTGATAAAGATGACCAGT+TGG | - | chr8_3:21300745-21300764 | Msa1281610:CDS | 35.0% | |
TAACAAATTCTACAGCCAAC+TGG | + | chr8_3:21300763-21300782 | None:intergenic | 35.0% | |
! | TTTGAAGCTAAAGGAATTGC+TGG | - | chr8_3:21300836-21300855 | Msa1281610:CDS | 35.0% |
ACAACAAATGCTGTTATTGC+TGG | - | chr8_3:21300881-21300900 | Msa1281610:intron | 35.0% | |
! | TGACTGTGTTACTGTATGTT+TGG | - | chr8_3:21301019-21301038 | Msa1281610:intron | 35.0% |
! | GACTGTGTTACTGTATGTTT+GGG | - | chr8_3:21301020-21301039 | Msa1281610:intron | 35.0% |
! | ACTGTGTTACTGTATGTTTG+GGG | - | chr8_3:21301021-21301040 | Msa1281610:intron | 35.0% |
GTGTCAAACAATATACCTTG+AGG | - | chr8_3:21301063-21301082 | Msa1281610:intron | 35.0% | |
!!! | AGAAGGTAGTTTTTTCCTCA+AGG | + | chr8_3:21301081-21301100 | None:intergenic | 35.0% |
!!! | TAACAGACTTTTTTGGTGGT+GGG | - | chr8_3:21301107-21301126 | Msa1281610:intron | 35.0% |
! | TGAAGTACTTGAGGGTTATT+TGG | - | chr8_3:21301279-21301298 | Msa1281610:CDS | 35.0% |
GCTTATGATAATAAGCCATC+TGG | + | chr8_3:21301405-21301424 | None:intergenic | 35.0% | |
GGAATGCAGTATTCTGTATT+TGG | - | chr8_3:21301551-21301570 | Msa1281610:intron | 35.0% | |
ATAAACAGCGAGCAAAACAT+GGG | + | chr8_3:21301631-21301650 | None:intergenic | 35.0% | |
AATAAACAGCGAGCAAAACA+TGG | + | chr8_3:21301632-21301651 | None:intergenic | 35.0% | |
!! | CATGATTTGTTAGGCTCAAA+TGG | + | chr8_3:21302059-21302078 | None:intergenic | 35.0% |
TACCACCATGTTCAAATATG+TGG | - | chr8_3:21302154-21302173 | Msa1281610:intron | 35.0% | |
ACCACCATGTTCAAATATGT+GGG | - | chr8_3:21302155-21302174 | Msa1281610:intron | 35.0% | |
GTTTCCCACATATTTGAACA+TGG | + | chr8_3:21302162-21302181 | None:intergenic | 35.0% | |
CAACATCCTTCAACTTTGAA+CGG | + | chr8_3:21302216-21302235 | None:intergenic | 35.0% | |
TGTTGTCGAAAAGATCATCA+AGG | - | chr8_3:21302231-21302250 | Msa1281610:intron | 35.0% | |
! | TTTGAAGCATTCATGACAAG+TGG | + | chr8_3:21302277-21302296 | None:intergenic | 35.0% |
GTTGAAAAACGTAAACACGT+TGG | - | chr8_3:21302540-21302559 | Msa1281610:CDS | 35.0% | |
GGTTTCAAAACTAACTCGTT+TGG | + | chr8_3:21302576-21302595 | None:intergenic | 35.0% | |
!!! | AGTTTTGAAACCCAGAAAAC+CGG | - | chr8_3:21302584-21302603 | Msa1281610:intron | 35.0% |
ATATGGGAATTCCATTGGTA+AGG | + | chr8_3:21302856-21302875 | None:intergenic | 35.0% | |
! | AGATTGGGTGCTATGAATAT+GGG | + | chr8_3:21302872-21302891 | None:intergenic | 35.0% |
CTCTCTCACGTTACTTATTT+GGG | - | chr8_3:21302893-21302912 | Msa1281610:intron | 35.0% | |
!!! | CTGCATTGGGTTTTTTAAGA+CGG | - | chr8_3:21303034-21303053 | Msa1281610:intron | 35.0% |
!!! | GGGTTTTTTAAGACGGTTAT+AGG | - | chr8_3:21303041-21303060 | Msa1281610:intron | 35.0% |
! | TACAGTAGAGGATTTTCAAC+AGG | - | chr8_3:21303423-21303442 | Msa1281610:intron | 35.0% |
GCAACATTAACATAAAGCAC+AGG | - | chr8_3:21303455-21303474 | Msa1281610:intron | 35.0% | |
TCAAGATGCAAGAAGGAAAT+GGG | + | chr8_3:21303500-21303519 | None:intergenic | 35.0% | |
TTCAAGATGCAAGAAGGAAA+TGG | + | chr8_3:21303501-21303520 | None:intergenic | 35.0% | |
CCATAATTCAAGATGCAAGA+AGG | + | chr8_3:21303507-21303526 | None:intergenic | 35.0% | |
CCTTCTTGCATCTTGAATTA+TGG | - | chr8_3:21303504-21303523 | Msa1281610:intron | 35.0% | |
TGGTGACTTTAAATTCAGAG+AGG | - | chr8_3:21303595-21303614 | Msa1281610:intron | 35.0% | |
TTCGACTTATCAGAATCATC+AGG | + | chr8_3:21303812-21303831 | None:intergenic | 35.0% | |
TTGTGCACGAACTATTAATC+CGG | - | chr8_3:21303946-21303965 | Msa1281610:intron | 35.0% | |
TTAGAATGCAAGATCTCAAC+CGG | + | chr8_3:21303968-21303987 | None:intergenic | 35.0% | |
!!! | CTGCTACTAGTTTTCTGATT+CGG | - | chr8_3:21304042-21304061 | Msa1281610:CDS | 35.0% |
GTTGAGTGAGAAGAAGTTGA+AGG | + | chr8_3:21296794-21296813 | None:intergenic | 40.0% | |
CACTCAACCCTCAATTTCAA+TGG | - | chr8_3:21296806-21296825 | Msa1281610:three_prime_UTR | 40.0% | |
GGAAGAAGCCATTGAAATTG+AGG | + | chr8_3:21296817-21296836 | None:intergenic | 40.0% | |
!!! | GTCGTTTTGGGTTTTCTTTC+AGG | - | chr8_3:21296907-21296926 | Msa1281610:three_prime_UTR | 40.0% |
TCAGGATGCAAAAGTTCTCA+TGG | - | chr8_3:21296925-21296944 | Msa1281610:three_prime_UTR | 40.0% | |
GATGCAAAAGTTCTCATGGT+TGG | - | chr8_3:21296929-21296948 | Msa1281610:three_prime_UTR | 40.0% | |
! | AGGGTTTTCTTCTGTACTTG+GGG | - | chr8_3:21297095-21297114 | Msa1281610:CDS | 40.0% |
!!! | TGGGGAGAGTTTTTTGGTAT+TGG | - | chr8_3:21297431-21297450 | Msa1281610:intron | 40.0% |
!! | GTAATTGGTGTTGGCAATGA+TGG | - | chr8_3:21297566-21297585 | Msa1281610:intron | 40.0% |
! | TGTTGGCAATGATGGAGATA+GGG | - | chr8_3:21297574-21297593 | Msa1281610:intron | 40.0% |
GTTGTTGAACCATGAACCAA+AGG | + | chr8_3:21297789-21297808 | None:intergenic | 40.0% | |
AACTTTAACTCGGTTGAACC+TGG | - | chr8_3:21297806-21297825 | Msa1281610:intron | 40.0% | |
GTTCAACCGTTTGAATTGTC+CGG | - | chr8_3:21297885-21297904 | Msa1281610:intron | 40.0% | |
TTCAACCGTTTGAATTGTCC+GGG | - | chr8_3:21297886-21297905 | Msa1281610:intron | 40.0% | |
GGATAATACTTTACACCCTC+TGG | - | chr8_3:21297926-21297945 | Msa1281610:intron | 40.0% | |
TGCTTATAACAGTGACCAGA+GGG | + | chr8_3:21297944-21297963 | None:intergenic | 40.0% | |
TTGCTTATAACAGTGACCAG+AGG | + | chr8_3:21297945-21297964 | None:intergenic | 40.0% | |
!!! | ATCTACGTGGTTTTAAGCCA+TGG | - | chr8_3:21298204-21298223 | Msa1281610:intron | 40.0% |
TCCATGTCAATCTGCACATT+GGG | + | chr8_3:21298264-21298283 | None:intergenic | 40.0% | |
TTGTTTCGACAATCCCATGT+TGG | - | chr8_3:21298318-21298337 | Msa1281610:intron | 40.0% | |
TGTTTCGACAATCCCATGTT+GGG | - | chr8_3:21298319-21298338 | Msa1281610:intron | 40.0% | |
ACATGTGAATCGTTTGTGCT+TGG | - | chr8_3:21298582-21298601 | Msa1281610:intron | 40.0% | |
TGCTAAACACAACCCCTATA+TGG | + | chr8_3:21299142-21299161 | None:intergenic | 40.0% | |
AAATAAGTTTCACAGACCGC+CGG | + | chr8_3:21299553-21299572 | None:intergenic | 40.0% | |
CAGGTTACAGTTCATGTCAA+AGG | - | chr8_3:21299692-21299711 | Msa1281610:intron | 40.0% | |
!! | TATGTCTTTGGAGCTGGTTT+AGG | + | chr8_3:21299743-21299762 | None:intergenic | 40.0% |
GTACAGACTGGATATGTCTT+TGG | + | chr8_3:21299755-21299774 | None:intergenic | 40.0% | |
GTACTTGTGATAGTACAGAC+TGG | + | chr8_3:21299767-21299786 | None:intergenic | 40.0% | |
TATCACAAGTACCCCATCAA+AGG | - | chr8_3:21299775-21299794 | Msa1281610:intron | 40.0% | |
ACCAACACATACCTTTGATG+GGG | + | chr8_3:21299789-21299808 | None:intergenic | 40.0% | |
GTTAGACTGTAACTGACTAC+TGG | + | chr8_3:21299968-21299987 | None:intergenic | 40.0% | |
ACAGTCTAACCTATTACCGA+AGG | - | chr8_3:21299978-21299997 | Msa1281610:intron | 40.0% | |
TAATGAGTGCCTTCGGTAAT+AGG | + | chr8_3:21299990-21300009 | None:intergenic | 40.0% | |
! | AGGACATCCTTGCTGTATAT+AGG | + | chr8_3:21300419-21300438 | None:intergenic | 40.0% |
! | CTGGACAATGATAATGCTTG+TGG | - | chr8_3:21300470-21300489 | Msa1281610:CDS | 40.0% |
! | AATGATAATGCTTGTGGCGA+TGG | - | chr8_3:21300476-21300495 | Msa1281610:CDS | 40.0% |
AGTTTCTGCCATGTCATCTT+TGG | - | chr8_3:21300505-21300524 | Msa1281610:CDS | 40.0% | |
GTTTCTGCCATGTCATCTTT+GGG | - | chr8_3:21300506-21300525 | Msa1281610:CDS | 40.0% | |
TAAGACTCCAGATATCTTGC+GGG | + | chr8_3:21300541-21300560 | None:intergenic | 40.0% | |
CTAAGACTCCAGATATCTTG+CGG | + | chr8_3:21300542-21300561 | None:intergenic | 40.0% | |
GTCTGATTTCACACTCTGAT+GGG | - | chr8_3:21300624-21300643 | Msa1281610:CDS | 40.0% | |
TCTCCATCTGGAAACTTAAC+GGG | - | chr8_3:21300670-21300689 | Msa1281610:CDS | 40.0% | |
!! | AACATACGTGCTGCTTCATT+TGG | - | chr8_3:21300794-21300813 | Msa1281610:CDS | 40.0% |
GATTGTCATTGAAGCCATCA+AGG | - | chr8_3:21300907-21300926 | Msa1281610:intron | 40.0% | |
!!! | GTCATTTTTCAGCACCTTGA+TGG | + | chr8_3:21300924-21300943 | None:intergenic | 40.0% |
GACGGATAAGTTAGAGAAAG+CGG | + | chr8_3:21300973-21300992 | None:intergenic | 40.0% | |
CTAACTTATCCGTCTTGCAT+TGG | - | chr8_3:21300979-21300998 | Msa1281610:intron | 40.0% | |
TCACTACATCCAATGCAAGA+CGG | + | chr8_3:21300991-21301010 | None:intergenic | 40.0% | |
!!! | CTAACAGACTTTTTTGGTGG+TGG | - | chr8_3:21301106-21301125 | Msa1281610:intron | 40.0% |
!!! | AACAGACTTTTTTGGTGGTG+GGG | - | chr8_3:21301108-21301127 | Msa1281610:intron | 40.0% |
AGCTAAGGACAGCTTATATC+AGG | + | chr8_3:21301358-21301377 | None:intergenic | 40.0% | |
GATTCATAAGCTTCTCCAGA+TGG | - | chr8_3:21301387-21301406 | Msa1281610:intron | 40.0% | |
ATGATATCACTCCTACTCGT+AGG | + | chr8_3:21301655-21301674 | None:intergenic | 40.0% | |
! | ATCATGTTTTTCCATGGGCA+TGG | - | chr8_3:21301670-21301689 | Msa1281610:intron | 40.0% |
! | TCATGTTTTTCCATGGGCAT+GGG | - | chr8_3:21301671-21301690 | Msa1281610:intron | 40.0% |
CGTCAGAGAGAAAATCATCA+CGG | + | chr8_3:21301909-21301928 | None:intergenic | 40.0% | |
CCAGACAATATGTCATTCTG+CGG | + | chr8_3:21301998-21302017 | None:intergenic | 40.0% | |
! | ATAAGCAGAGTGTTTCTTGC+TGG | + | chr8_3:21302026-21302045 | None:intergenic | 40.0% |
TCCCACATATTTGAACATGG+TGG | + | chr8_3:21302159-21302178 | None:intergenic | 40.0% | |
CACAAACCGTTCAAAGTTGA+AGG | - | chr8_3:21302207-21302226 | Msa1281610:intron | 40.0% | |
AAGATCATCAAGGCTAAGCT+TGG | - | chr8_3:21302241-21302260 | Msa1281610:intron | 40.0% | |
AGATCATCAAGGCTAAGCTT+GGG | - | chr8_3:21302242-21302261 | Msa1281610:intron | 40.0% | |
AAGCATTCATGACAAGTGGA+AGG | + | chr8_3:21302273-21302292 | None:intergenic | 40.0% | |
CAATATCACCAGCTTCATAG+AGG | + | chr8_3:21302303-21302322 | None:intergenic | 40.0% | |
CTATGAAGCTGGTGATATTG+AGG | - | chr8_3:21302303-21302322 | Msa1281610:intron | 40.0% | |
TGGTGATATTGAGGATGACA+TGG | - | chr8_3:21302312-21302331 | Msa1281610:intron | 40.0% | |
!! | GAAGCATACCTTTTCAAGGT+TGG | + | chr8_3:21302353-21302372 | None:intergenic | 40.0% |
!!! | GTTTTGAAACCCAGAAAACC+GGG | - | chr8_3:21302585-21302604 | Msa1281610:intron | 40.0% |
TGAAAAGCGAAACACCAAAC+GGG | + | chr8_3:21302630-21302649 | None:intergenic | 40.0% | |
CTGAAAAGCGAAACACCAAA+CGG | + | chr8_3:21302631-21302650 | None:intergenic | 40.0% | |
! | GAAATCCAGATATTTCGGGT+CGG | - | chr8_3:21302650-21302669 | Msa1281610:intron | 40.0% |
! | AAATCCAGATATTTCGGGTC+GGG | - | chr8_3:21302651-21302670 | Msa1281610:intron | 40.0% |
CACCCATAAATCCTTACCAA+TGG | - | chr8_3:21302842-21302861 | Msa1281610:intron | 40.0% | |
! | GAGATTGGGTGCTATGAATA+TGG | + | chr8_3:21302873-21302892 | None:intergenic | 40.0% |
CCAAATAAGTAACGTGAGAG+AGG | + | chr8_3:21302895-21302914 | None:intergenic | 40.0% | |
CCTCTCTCACGTTACTTATT+TGG | - | chr8_3:21302892-21302911 | Msa1281610:intron | 40.0% | |
!!! | GGTGTTATTTGCTACCGTTT+TGG | - | chr8_3:21303062-21303081 | Msa1281610:intron | 40.0% |
TCGAGATCCTAAGTAAGATC+GGG | + | chr8_3:21303325-21303344 | None:intergenic | 40.0% | |
CTCGAGATCCTAAGTAAGAT+CGG | + | chr8_3:21303326-21303345 | None:intergenic | 40.0% | |
TGGTACAATGCTTACAGTAG+AGG | - | chr8_3:21303411-21303430 | Msa1281610:intron | 40.0% | |
! | GGAAGCTTTCTTTTCTTCAC+CGG | + | chr8_3:21303791-21303810 | None:intergenic | 40.0% |
ATGCTCGATGGGAATTTAGA+TGG | - | chr8_3:21303896-21303915 | Msa1281610:intron | 40.0% | |
TGCTCGATGGGAATTTAGAT+GGG | - | chr8_3:21303897-21303916 | Msa1281610:intron | 40.0% | |
! | TGTTCTTGTGCTTTTCTCTG+TGG | - | chr8_3:21304080-21304099 | Msa1281610:intron | 40.0% |
! | AAAGTTCTCATGGTTGGTGC+TGG | - | chr8_3:21296935-21296954 | Msa1281610:three_prime_UTR | 45.0% |
CTGAAAACTCTTGCTCTCTC+TGG | - | chr8_3:21296977-21296996 | Msa1281610:three_prime_UTR | 45.0% | |
! | GTGTTGGCAATGATGGAGAT+AGG | - | chr8_3:21297573-21297592 | Msa1281610:intron | 45.0% |
! | AAAGGTCTTGGTTCGATGTC+CGG | + | chr8_3:21297771-21297790 | None:intergenic | 45.0% |
! | GAACCAAGACCTTTGGTTCA+TGG | - | chr8_3:21297777-21297796 | Msa1281610:intron | 45.0% |
GAACCATGAACCAAAGGTCT+TGG | + | chr8_3:21297783-21297802 | None:intergenic | 45.0% | |
GTTGAACCTGGACAAAACCA+CGG | - | chr8_3:21297818-21297837 | Msa1281610:intron | 45.0% | |
ACCAACCCGGACAATTCAAA+CGG | + | chr8_3:21297894-21297913 | None:intergenic | 45.0% | |
TTGCGTATAATAGTGACCGG+AGG | - | chr8_3:21298060-21298079 | Msa1281610:intron | 45.0% | |
TGCGTATAATAGTGACCGGA+GGG | - | chr8_3:21298061-21298080 | Msa1281610:intron | 45.0% | |
GGTGTAGGTGATAAGCTTGT+GGG | - | chr8_3:21298082-21298101 | Msa1281610:intron | 45.0% | |
GTGTAGGTGATAAGCTTGTG+GGG | - | chr8_3:21298083-21298102 | Msa1281610:intron | 45.0% | |
TCCCAATGTGCAGATTGACA+TGG | - | chr8_3:21298260-21298279 | Msa1281610:intron | 45.0% | |
GTCCATGTCAATCTGCACAT+TGG | + | chr8_3:21298265-21298284 | None:intergenic | 45.0% | |
AAGTCTTCAACCAGGTTGCT+AGG | - | chr8_3:21298422-21298441 | Msa1281610:intron | 45.0% | |
AGTCTTCAACCAGGTTGCTA+GGG | - | chr8_3:21298423-21298442 | Msa1281610:intron | 45.0% | |
! | GGTGTCCCCTGAAATTTTAG+AGG | + | chr8_3:21299389-21299408 | None:intergenic | 45.0% |
AATAAGTTTCACAGACCGCC+GGG | + | chr8_3:21299552-21299571 | None:intergenic | 45.0% | |
!! | ACTGGATATGTCTTTGGAGC+TGG | + | chr8_3:21299749-21299768 | None:intergenic | 45.0% |
! | ACCCCATCAAAGGTATGTGT+TGG | - | chr8_3:21299785-21299804 | Msa1281610:intron | 45.0% |
CTTTGTCCAATGAGGAGACA+TGG | - | chr8_3:21300372-21300391 | Msa1281610:intron | 45.0% | |
GGATGTCCTGTCTGATGAAT+TGG | - | chr8_3:21300430-21300449 | Msa1281610:CDS | 45.0% | |
CTTCATGCCCAAAGATGACA+TGG | + | chr8_3:21300516-21300535 | None:intergenic | 45.0% | |
TGAAGAACCCGCAAGATATC+TGG | - | chr8_3:21300531-21300550 | Msa1281610:CDS | 45.0% | |
GGTCTGATTTCACACTCTGA+TGG | - | chr8_3:21300623-21300642 | Msa1281610:CDS | 45.0% | |
GTTCCCGTTAAGTTTCCAGA+TGG | + | chr8_3:21300676-21300695 | None:intergenic | 45.0% | |
TGGTAACATTGTGCATGCTG+TGG | - | chr8_3:21300856-21300875 | Msa1281610:intron | 45.0% | |
!! | TTGGTGATGTTTCTGCTGCA+CGG | - | chr8_3:21301513-21301532 | Msa1281610:intron | 45.0% |
! | GCACGGGTTGTAGAATTGTT+AGG | - | chr8_3:21301530-21301549 | Msa1281610:intron | 45.0% |
CGCTGTTTATTCCTACGAGT+AGG | - | chr8_3:21301641-21301660 | Msa1281610:intron | 45.0% | |
AGCGAGATAAGTTAGAGCTG+TGG | + | chr8_3:21301713-21301732 | None:intergenic | 45.0% | |
CCGCAGAATGACATATTGTC+TGG | - | chr8_3:21301995-21302014 | Msa1281610:intron | 45.0% | |
AAACACTCTGCTTATGCCAG+TGG | - | chr8_3:21302031-21302050 | Msa1281610:intron | 45.0% | |
TCAAACCTCCTCTATGAAGC+TGG | - | chr8_3:21302292-21302311 | Msa1281610:intron | 45.0% | |
TATCACCAGCTTCATAGAGG+AGG | + | chr8_3:21302300-21302319 | None:intergenic | 45.0% | |
GTAACGTGAGAGAGGAGATT+GGG | + | chr8_3:21302887-21302906 | None:intergenic | 45.0% | |
AGTAACGTGAGAGAGGAGAT+TGG | + | chr8_3:21302888-21302907 | None:intergenic | 45.0% | |
GATCCTAAGTAAGATCGGGT+AGG | + | chr8_3:21303321-21303340 | None:intergenic | 45.0% | |
AGCATTGTACCACCAGTTAC+AGG | + | chr8_3:21303403-21303422 | None:intergenic | 45.0% | |
GATGAAGAGAAAGAACCCGA+TGG | - | chr8_3:21303623-21303642 | Msa1281610:intron | 45.0% | |
AGAGAAAGAACCCGATGGTA+TGG | - | chr8_3:21303628-21303647 | Msa1281610:intron | 45.0% | |
TCCTGAGAGAACCATACCAT+CGG | + | chr8_3:21303642-21303661 | None:intergenic | 45.0% | |
ATGGTATGGTTCTCTCAGGA+TGG | - | chr8_3:21303642-21303661 | Msa1281610:intron | 45.0% | |
! | CGAATACTGCTGATGACGAA+AGG | - | chr8_3:21303828-21303847 | Msa1281610:intron | 45.0% |
ACGATCTTGTCATGCTCGAT+GGG | - | chr8_3:21303885-21303904 | Msa1281610:intron | 45.0% | |
GTAGAGGTTTGGCGATTCTT+TGG | - | chr8_3:21303999-21304018 | Msa1281610:intron | 45.0% | |
GCGATTCTTTGGCCATAACT+GGG | - | chr8_3:21304010-21304029 | Msa1281610:CDS | 45.0% | |
TCTTTGGCCATAACTGGGTT+AGG | - | chr8_3:21304015-21304034 | Msa1281610:CDS | 45.0% | |
CAGCATACCTAACCCAGTTA+TGG | + | chr8_3:21304025-21304044 | None:intergenic | 45.0% | |
!! | ATGGTTGGTGCTGGTGGAAT+TGG | - | chr8_3:21296944-21296963 | Msa1281610:three_prime_UTR | 50.0% |
GGACATCGAACCAAGACCTT+TGG | - | chr8_3:21297770-21297789 | Msa1281610:intron | 50.0% | |
!!! | GTTCAACCGTGGTTTTGTCC+AGG | + | chr8_3:21297827-21297846 | None:intergenic | 50.0% |
ACCGTTTGAATTGTCCGGGT+TGG | - | chr8_3:21297890-21297909 | Msa1281610:intron | 50.0% | |
! | TAATAGTGACCGGAGGGTGT+AGG | - | chr8_3:21298067-21298086 | Msa1281610:intron | 50.0% |
AGCTTATCACCTACACCCTC+CGG | + | chr8_3:21298079-21298098 | None:intergenic | 50.0% | |
GGGTGTAGGTGATAAGCTTG+TGG | - | chr8_3:21298081-21298100 | Msa1281610:intron | 50.0% | |
GATGCAGATCTGGTGAATGC+TGG | - | chr8_3:21298107-21298126 | Msa1281610:intron | 50.0% | |
GTGAATGCTGGTGGAAGTTG+TGG | - | chr8_3:21298119-21298138 | Msa1281610:intron | 50.0% | |
AAACAGCATCCCTAGCAACC+TGG | + | chr8_3:21298435-21298454 | None:intergenic | 50.0% | |
AGTGGAACTACTGGGTTCCT+TGG | - | chr8_3:21298628-21298647 | Msa1281610:intron | 50.0% | |
AACTACTGGGTTCCTTGGTC+AGG | - | chr8_3:21298633-21298652 | Msa1281610:intron | 50.0% | |
ATAAGTTTCACAGACCGCCG+GGG | + | chr8_3:21299551-21299570 | None:intergenic | 50.0% | |
! | TGGTGATGTTTCTGCTGCAC+GGG | - | chr8_3:21301514-21301533 | Msa1281610:intron | 50.0% |
CAAAGTAACTCCCATGCCCA+TGG | + | chr8_3:21301684-21301703 | None:intergenic | 50.0% | |
TTAGGCTCAAATGGCTCCAC+TGG | + | chr8_3:21302050-21302069 | None:intergenic | 50.0% | |
GATCGCGAGTTTGTCTACCA+TGG | + | chr8_3:21302424-21302443 | None:intergenic | 50.0% | |
AAACTCGCGATCCAACTCGT+AGG | - | chr8_3:21302432-21302451 | Msa1281610:CDS | 50.0% | |
GGGATGTGAGATCGTGAACT+CGG | + | chr8_3:21302463-21302482 | None:intergenic | 50.0% | |
! | AACCGATTCCGACGACTTTC+CGG | + | chr8_3:21302495-21302514 | None:intergenic | 50.0% |
! | AAGTCGTCGGAATCGGTTTC+TGG | - | chr8_3:21302497-21302516 | Msa1281610:CDS | 50.0% |
TGAATCGGGGGATCGTAACA+CGG | + | chr8_3:21303285-21303304 | None:intergenic | 50.0% | |
ACCCATGAGATCGTGAATCG+GGG | + | chr8_3:21303298-21303317 | None:intergenic | 50.0% | |
GACCCATGAGATCGTGAATC+GGG | + | chr8_3:21303299-21303318 | None:intergenic | 50.0% | |
GGACCCATGAGATCGTGAAT+CGG | + | chr8_3:21303300-21303319 | None:intergenic | 50.0% | |
GGTCCTACCCGATCTTACTT+AGG | - | chr8_3:21303315-21303334 | Msa1281610:intron | 50.0% | |
GAGCTTCCTTCTCCTGTAAC+TGG | - | chr8_3:21303388-21303407 | Msa1281610:intron | 50.0% | |
CTTCCTTCTCCTGTAACTGG+TGG | - | chr8_3:21303391-21303410 | Msa1281610:intron | 50.0% | |
GTACCACCAGTTACAGGAGA+AGG | + | chr8_3:21303397-21303416 | None:intergenic | 50.0% | |
CCTGAGAGAACCATACCATC+GGG | + | chr8_3:21303641-21303660 | None:intergenic | 50.0% | |
! | TCATTTTCTGCAGCTGCAGC+TGG | + | chr8_3:21303674-21303693 | None:intergenic | 50.0% |
TGCTGTTATTGGTGCGTCTG+AGG | + | chr8_3:21303726-21303745 | None:intergenic | 50.0% | |
GACGATCTTGTCATGCTCGA+TGG | - | chr8_3:21303884-21303903 | Msa1281610:intron | 50.0% | |
GGCGATTCTTTGGCCATAAC+TGG | - | chr8_3:21304009-21304028 | Msa1281610:CDS | 50.0% | |
!! | CTTGCTGACTTCTGACAGAG+AGG | - | chr8_3:21304121-21304140 | Msa1281610:intron | 50.0% |
!! | GTTCTCATGGTTGGTGCTGG+TGG | - | chr8_3:21296938-21296957 | Msa1281610:three_prime_UTR | 55.0% |
AACCAAACCGTAGACGGTGC+TGG | - | chr8_3:21297856-21297875 | Msa1281610:intron | 55.0% | |
AACCAGCACCGTCTACGGTT+TGG | + | chr8_3:21297861-21297880 | None:intergenic | 55.0% | |
CTTGTGGGGAGATGCAGATC+TGG | - | chr8_3:21298097-21298116 | Msa1281610:intron | 55.0% | |
GCAGATCTGGTGAATGCTGG+TGG | - | chr8_3:21298110-21298129 | Msa1281610:intron | 55.0% | |
ATCCCATGTTGGGCAGTCCA+AGG | - | chr8_3:21298329-21298348 | Msa1281610:intron | 55.0% | |
AGCCTTGGACTGCCCAACAT+GGG | + | chr8_3:21298334-21298353 | None:intergenic | 55.0% | |
! | TAGCCTTGGACTGCCCAACA+TGG | + | chr8_3:21298335-21298354 | None:intergenic | 55.0% |
GGCTGGACAACCTAGATGCA+CGG | - | chr8_3:21298557-21298576 | Msa1281610:intron | 55.0% | |
TCACATGTCGCCGTGCATCT+AGG | + | chr8_3:21298570-21298589 | None:intergenic | 55.0% | |
!!! | ACCTCCTAGTTTTGTGGCCC+CGG | - | chr8_3:21299531-21299550 | Msa1281610:intron | 55.0% |
ACTCGGACGATCCTACGAGT+TGG | + | chr8_3:21302446-21302465 | None:intergenic | 55.0% | |
ATTCCGACGACTTTCCGGCA+CGG | + | chr8_3:21302490-21302509 | None:intergenic | 55.0% | |
TGCCGGAAAGTCGTCGGAAT+CGG | - | chr8_3:21302490-21302509 | Msa1281610:CDS | 55.0% | |
! | TCGTCGGAATCGGTTTCTGG+TGG | - | chr8_3:21302500-21302519 | Msa1281610:CDS | 55.0% |
!! | GAATCGGTTTCTGGTGGTCG+CGG | - | chr8_3:21302506-21302525 | Msa1281610:CDS | 55.0% |
AACCCAGAAAACCGGGTTCG+CGG | - | chr8_3:21302592-21302611 | Msa1281610:intron | 55.0% | |
CGAACCCGACCCGAAATATC+TGG | + | chr8_3:21302658-21302677 | None:intergenic | 55.0% | |
TTCTGGGCTGCAGCTGCATT+GGG | - | chr8_3:21303021-21303040 | Msa1281610:intron | 55.0% | |
TCCCCCGATTCACGATCTCA+TGG | - | chr8_3:21303293-21303312 | Msa1281610:intron | 55.0% | |
CCCATGAGATCGTGAATCGG+GGG | + | chr8_3:21303297-21303316 | None:intergenic | 55.0% | |
CCCCCGATTCACGATCTCAT+GGG | - | chr8_3:21303294-21303313 | Msa1281610:intron | 55.0% | |
CAGGAGAAGGAAGCTCAGCT+AGG | + | chr8_3:21303384-21303403 | None:intergenic | 55.0% | |
CCCGATGGTATGGTTCTCTC+AGG | - | chr8_3:21303638-21303657 | Msa1281610:intron | 55.0% | |
!!! | TCCTAGTTTTGTGGCCCCGG+CGG | - | chr8_3:21299534-21299553 | Msa1281610:intron | 60.0% |
!! | GGTTTCTGGTGGTCGCGGAT+TGG | - | chr8_3:21302511-21302530 | Msa1281610:CDS | 60.0% |
ACCCAGAAAACCGGGTTCGC+GGG | - | chr8_3:21302593-21302612 | Msa1281610:intron | 60.0% | |
! | ACCCGCGAACCCGGTTTTCT+GGG | + | chr8_3:21302597-21302616 | None:intergenic | 60.0% |
AGAAAACCGGGTTCGCGGGT+CGG | - | chr8_3:21302597-21302616 | Msa1281610:intron | 60.0% | |
! | GTTCTGGGCTGCAGCTGCAT+TGG | - | chr8_3:21303020-21303039 | Msa1281610:intron | 60.0% |
CCGCGAACCAGCACCGTCTA+CGG | + | chr8_3:21297866-21297885 | None:intergenic | 65.0% | |
!! | CCGTAGACGGTGCTGGTTCG+CGG | - | chr8_3:21297863-21297882 | Msa1281610:intron | 65.0% |
GCCGGGGCCACAAAACTAGG+AGG | + | chr8_3:21299535-21299554 | None:intergenic | 65.0% | |
ACCGCCGGGGCCACAAAACT+AGG | + | chr8_3:21299538-21299557 | None:intergenic | 65.0% | |
ACGACTTTCCGGCACGGCGA+GGG | + | chr8_3:21302484-21302503 | None:intergenic | 65.0% | |
TCGCCGTGCCGGAAAGTCGT+CGG | - | chr8_3:21302484-21302503 | Msa1281610:CDS | 65.0% | |
! | GACCCGCGAACCCGGTTTTC+TGG | + | chr8_3:21302598-21302617 | None:intergenic | 65.0% |
!! | GGGTCGGTTCGTGACCCGTT+TGG | - | chr8_3:21302613-21302632 | Msa1281610:intron | 65.0% |
CTCACATCCCCTCGCCGTGC+CGG | - | chr8_3:21302473-21302492 | Msa1281610:CDS | 70.0% | |
CGACTTTCCGGCACGGCGAG+GGG | + | chr8_3:21302483-21302502 | None:intergenic | 70.0% | |
GACGACTTTCCGGCACGGCG+AGG | + | chr8_3:21302485-21302504 | None:intergenic | 70.0% | |
CACGAACCGACCCGCGAACC+CGG | + | chr8_3:21302606-21302625 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 21296742 | 21304283 | 21296742 | ID=Msa1281610;Name=Msa1281610 |
chr8_3 | mRNA | 21296742 | 21304283 | 21296742 | ID=Msa1281610-mRNA-1;Parent=Msa1281610;Name=Msa1281610-mRNA-1;_AED=0.12;_eAED=0.12;_QI=83|0.9|0.90|1|1|1|11|340|613 |
chr8_3 | exon | 21296742 | 21297412 | 21296742 | ID=Msa1281610-mRNA-1:exon:7796;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21297549 | 21297580 | 21297549 | ID=Msa1281610-mRNA-1:exon:7795;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21298662 | 21298841 | 21298662 | ID=Msa1281610-mRNA-1:exon:7794;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21298931 | 21299024 | 21298931 | ID=Msa1281610-mRNA-1:exon:7793;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21300068 | 21300297 | 21300068 | ID=Msa1281610-mRNA-1:exon:7792;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21300406 | 21300864 | 21300406 | ID=Msa1281610-mRNA-1:exon:7791;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21301229 | 21301330 | 21301229 | ID=Msa1281610-mRNA-1:exon:7790;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21302371 | 21302589 | 21302371 | ID=Msa1281610-mRNA-1:exon:7789;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21302669 | 21302752 | 21302669 | ID=Msa1281610-mRNA-1:exon:7788;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21304007 | 21304096 | 21304007 | ID=Msa1281610-mRNA-1:exon:7787;Parent=Msa1281610-mRNA-1 |
chr8_3 | exon | 21304180 | 21304283 | 21304180 | ID=Msa1281610-mRNA-1:exon:7786;Parent=Msa1281610-mRNA-1 |
chr8_3 | five_prime_UTR | 21304201 | 21304283 | 21304201 | ID=Msa1281610-mRNA-1:five_prime_utr;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21304180 | 21304200 | 21304180 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21304007 | 21304096 | 21304007 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21302669 | 21302752 | 21302669 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21302371 | 21302589 | 21302371 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21301229 | 21301330 | 21301229 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21300406 | 21300864 | 21300406 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21300068 | 21300297 | 21300068 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21298931 | 21299024 | 21298931 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21298662 | 21298841 | 21298662 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21297549 | 21297580 | 21297549 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | CDS | 21297082 | 21297412 | 21297082 | ID=Msa1281610-mRNA-1:cds;Parent=Msa1281610-mRNA-1 |
chr8_3 | three_prime_UTR | 21296742 | 21297081 | 21296742 | ID=Msa1281610-mRNA-1:three_prime_utr;Parent=Msa1281610-mRNA-1 |
Gene Sequence |
Protein sequence |