Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240340 | XP_013445075.1 | 98.740 | 635 | 8 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240340 | sp|Q9SJT1|SAE2_ARATH | 78.435 | 524 | 112 | 1 | 4 | 526 | 8 | 531 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240340 | A0A072TPF5 | 98.740 | 635 | 8 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1295 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014830 | Msa1240340 | 0.807702 | 4.441962e-50 | -8.615850e-47 |
| Msa0033880 | Msa1240340 | 0.811934 | 5.460665e-51 | -8.615850e-47 |
| Msa0077900 | Msa1240340 | 0.815872 | 7.397825e-52 | -8.615850e-47 |
| Msa0097950 | Msa1240340 | 0.805865 | 1.086062e-49 | -8.615850e-47 |
| Msa0108870 | Msa1240340 | 0.818815 | 1.610146e-52 | -8.615850e-47 |
| Msa0610090 | Msa1240340 | 0.803427 | 3.504082e-49 | -8.615850e-47 |
| Msa0646130 | Msa1240340 | 0.810817 | 9.545222e-51 | -8.615850e-47 |
| Msa0658480 | Msa1240340 | 0.823681 | 1.215246e-53 | -8.615850e-47 |
| Msa0714920 | Msa1240340 | 0.864336 | 1.308156e-64 | -8.615850e-47 |
| Msa0744090 | Msa1240340 | 0.822770 | 1.982476e-53 | -8.615850e-47 |
| Msa0744100 | Msa1240340 | 0.812279 | 4.591933e-51 | -8.615850e-47 |
| Msa0756930 | Msa1240340 | 0.848310 | 6.650738e-60 | -8.615850e-47 |
| Msa0795660 | Msa1240340 | 0.810110 | 1.356389e-50 | -8.615850e-47 |
| Msa0825270 | Msa1240340 | 0.822998 | 1.754284e-53 | -8.615850e-47 |
| Msa0825280 | Msa1240340 | 0.813393 | 2.619110e-51 | -8.615850e-47 |
| Msa0836500 | Msa1240340 | 0.826433 | 2.720256e-54 | -8.615850e-47 |
| Msa0127850 | Msa1240340 | 0.816079 | 6.652722e-52 | -8.615850e-47 |
| Msa0155330 | Msa1240340 | 0.808644 | 2.798238e-50 | -8.615850e-47 |
| Msa0174000 | Msa1240340 | 0.820901 | 5.367619e-53 | -8.615850e-47 |
| Msa0179000 | Msa1240340 | 0.805751 | 1.147281e-49 | -8.615850e-47 |
| Msa0198520 | Msa1240340 | 0.809807 | 1.576617e-50 | -8.615850e-47 |
| Msa0198530 | Msa1240340 | 0.819573 | 1.081639e-52 | -8.615850e-47 |
| Msa1240340 | Msa1281610 | 0.828434 | 9.008788e-55 | -8.615850e-47 |
| Msa1240340 | Msa1355700 | 0.802836 | 4.644152e-49 | -8.615850e-47 |
| Msa1240340 | Msa1385810 | 0.803075 | 4.144344e-49 | -8.615850e-47 |
| Msa1240340 | Msa1409260 | 0.807110 | 5.930761e-50 | -8.615850e-47 |
| Msa0474700 | Msa1240340 | 0.835245 | 1.876912e-56 | -8.615850e-47 |
| Msa0478580 | Msa1240340 | 0.816898 | 4.361513e-52 | -8.615850e-47 |
| Msa0981430 | Msa1240340 | 0.835530 | 1.590448e-56 | -8.615850e-47 |
| Msa1017510 | Msa1240340 | 0.820139 | 8.031101e-53 | -8.615850e-47 |
| Msa1093330 | Msa1240340 | 0.812552 | 4.002344e-51 | -8.615850e-47 |
| Msa0239940 | Msa1240340 | 0.808474 | 3.042200e-50 | -8.615850e-47 |
| Msa0259270 | Msa1240340 | 0.824164 | 9.359487e-54 | -8.615850e-47 |
| Msa0308220 | Msa1240340 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
| Msa0333160 | Msa1240340 | 0.808381 | 3.185668e-50 | -8.615850e-47 |
| Msa0343190 | Msa1240340 | 0.836170 | 1.094828e-56 | -8.615850e-47 |
| Msa0346990 | Msa1240340 | 0.818586 | 1.814223e-52 | -8.615850e-47 |
| Msa1181170 | Msa1240340 | -0.813239 | 2.830761e-51 | -8.615850e-47 |
| Msa1186080 | Msa1240340 | 0.823684 | 1.213451e-53 | -8.615850e-47 |
| Msa1201830 | Msa1240340 | 0.816182 | 6.309125e-52 | -8.615850e-47 |
| Msa0851470 | Msa1240340 | 0.816396 | 5.649921e-52 | -8.615850e-47 |
| Msa0881580 | Msa1240340 | 0.827136 | 1.848420e-54 | -8.615850e-47 |
| Msa0888940 | Msa1240340 | 0.800827 | 1.200612e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240340 | MtrunA17_Chr8g0352371 | 98.740 | 635 | 8 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1295 |
| Msa1240340 | MtrunA17_Chr4g0074481 | 41.711 | 187 | 92 | 3 | 9 | 180 | 48 | 232 | 1.66e-39 | 150 |
| Msa1240340 | MtrunA17_Chr0c01g0489601 | 29.139 | 453 | 254 | 14 | 6 | 405 | 210 | 648 | 1.83e-36 | 145 |
| Msa1240340 | MtrunA17_Chr5g0431171 | 40.217 | 184 | 102 | 2 | 6 | 181 | 493 | 676 | 6.85e-33 | 135 |
| Msa1240340 | MtrunA17_Chr5g0431151 | 40.659 | 182 | 100 | 2 | 8 | 181 | 496 | 677 | 2.12e-30 | 127 |
| Msa1240340 | MtrunA17_Chr5g0444711 | 28.105 | 153 | 108 | 2 | 9 | 160 | 91 | 242 | 1.28e-19 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1240340 | AT2G21470.1 | 72.213 | 619 | 154 | 5 | 4 | 621 | 8 | 609 | 0.0 | 913 |
| Msa1240340 | AT2G21470.3 | 71.865 | 622 | 154 | 6 | 4 | 621 | 8 | 612 | 0.0 | 909 |
| Msa1240340 | AT2G21470.2 | 78.435 | 524 | 112 | 1 | 4 | 526 | 8 | 531 | 0.0 | 882 |
| Msa1240340 | AT5G19180.1 | 37.981 | 208 | 111 | 4 | 6 | 197 | 43 | 248 | 3.20e-39 | 150 |
| Msa1240340 | AT5G19180.2 | 37.981 | 208 | 111 | 4 | 6 | 197 | 43 | 248 | 3.84e-39 | 149 |
| Msa1240340 | AT5G06460.1 | 39.674 | 184 | 103 | 2 | 6 | 181 | 487 | 670 | 5.36e-32 | 133 |
| Msa1240340 | AT2G30110.1 | 40.761 | 184 | 101 | 2 | 6 | 181 | 490 | 673 | 6.85e-30 | 126 |
| Msa1240340 | AT5G55130.1 | 29.560 | 159 | 109 | 3 | 3 | 160 | 87 | 243 | 4.26e-18 | 87.8 |
| Msa1240340 | AT1G05350.1 | 28.235 | 170 | 96 | 4 | 6 | 154 | 80 | 244 | 5.26e-14 | 75.1 |
| Msa1240340 | AT5G55130.2 | 26.950 | 141 | 99 | 3 | 23 | 160 | 77 | 216 | 2.06e-12 | 70.1 |
| Msa1240340 | AT5G55130.3 | 26.154 | 130 | 94 | 2 | 32 | 160 | 11 | 139 | 1.79e-11 | 66.6 |
| Msa1240340 | AT2G32410.2 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 1.83e-11 | 67.0 |
| Msa1240340 | AT2G32410.3 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 2.32e-11 | 66.6 |
| Msa1240340 | AT2G32410.1 | 30.719 | 153 | 95 | 4 | 1 | 147 | 18 | 165 | 4.78e-11 | 66.2 |
Find 133 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATATTTGATCACGTATT+TGG | 0.071426 | 8_2:+22788958 | Msa1240340:CDS |
| CAATTTAATGTTGTTCTTAA+TGG | 0.121606 | 8_2:+22787161 | Msa1240340:CDS |
| AGTTTCTGCCATGTCATCTT+TGG | 0.181999 | 8_2:+22789131 | Msa1240340:CDS |
| GGCGATTCTTTGGCCATAAC+CGG | 0.270969 | 8_2:+22791686 | Msa1240340:three_prime_UTR |
| AATTTAATGTTGTTCTTAAT+GGG | 0.285173 | 8_2:+22787162 | Msa1240340:CDS |
| ATGCTCGATGGGAATTTAGA+TGG | 0.308432 | 8_2:+22791573 | Msa1240340:CDS |
| GTAGAGGTTTGGCGATTCTT+TGG | 0.322009 | 8_2:+22791676 | Msa1240340:three_prime_UTR |
| CTCAAAACTCTTGCTCTCTC+TGG | 0.324705 | 8_2:+22785600 | Msa1240340:CDS |
| TGAAGAACCCGCAAGATATC+TGG | 0.325240 | 8_2:+22789157 | Msa1240340:CDS |
| GTTTCTGCCATGTCATCTTT+GGG | 0.331041 | 8_2:+22789132 | Msa1240340:CDS |
| GATGAAGACATCAGTCAATA+TGG | 0.334504 | 8_2:+22788931 | Msa1240340:CDS |
| AAATATTTGATCACGTATTT+GGG | 0.339346 | 8_2:+22788959 | Msa1240340:CDS |
| GAGCTTCCTTCTCCTGTAAC+TGG | 0.354131 | 8_2:+22791065 | Msa1240340:CDS |
| TCCTTGCTGTATATAGGTTT+AGG | 0.357502 | 8_2:-22789036 | None:intergenic |
| AAAATGACATTAAAAGTTAT+AGG | 0.357518 | 8_2:+22789562 | Msa1240340:CDS |
| AACATACGTGCTGCTTCATT+TGG | 0.360112 | 8_2:+22789420 | Msa1240340:CDS |
| TTTGAAGCTAAAGGAATTGC+TGG | 0.366032 | 8_2:+22789462 | Msa1240340:CDS |
| ATGGTTGGTGCTGGTGGAAT+TGG | 0.366549 | 8_2:+22785567 | Msa1240340:CDS |
| ACAACAAATGCTGTTATTGC+TGG | 0.369447 | 8_2:+22789507 | Msa1240340:CDS |
| CATGATTTGTTAGGCTCAAA+TGG | 0.375091 | 8_2:-22790677 | None:intergenic |
| CAAACATAACATGATTTGTT+AGG | 0.378706 | 8_2:-22790686 | None:intergenic |
| CACTCAACCCTCAATTTCAA+TGG | 0.379525 | 8_2:+22785429 | Msa1240340:exon |
| GGATGTCCTGTCTGATGAAT+TGG | 0.379913 | 8_2:+22789056 | Msa1240340:CDS |
| GTGTTTATTTCAAGCAATAC+AGG | 0.388272 | 8_2:-22790809 | None:intergenic |
| TATGTCTTTGGAGCTGGTTT+AGG | 0.388767 | 8_2:-22788366 | None:intergenic |
| AGGACATCCTTGCTGTATAT+AGG | 0.394304 | 8_2:-22789042 | None:intergenic |
| GTACAGACTGGATATGTCTT+TGG | 0.400617 | 8_2:-22788378 | None:intergenic |
| AACTTCTGTTAACTAATATC+AGG | 0.408324 | 8_2:-22791852 | None:intergenic |
| TTAGTTGAAAGTGGAACTAC+TGG | 0.412993 | 8_2:+22787245 | Msa1240340:CDS |
| TCTTTGGCCATAACCGGGTT+AGG | 0.414657 | 8_2:+22791692 | Msa1240340:three_prime_UTR |
| GGATAAACAGAATGGAAATC+TGG | 0.420193 | 8_2:+22789077 | Msa1240340:CDS |
| TCACATGTCGCCGTGCATCT+AGG | 0.421302 | 8_2:-22787193 | None:intergenic |
| AAACCAACACATACCTTTGA+TGG | 0.425453 | 8_2:-22788414 | None:intergenic |
| AGCATTGTACCACCAGTTAC+AGG | 0.426441 | 8_2:-22791077 | None:intergenic |
| TAAGACTCCAGATATCTTGC+GGG | 0.426595 | 8_2:-22789164 | None:intergenic |
| CAGCATACCTAACCCGGTTA+TGG | 0.428578 | 8_2:-22791699 | None:intergenic |
| AAAATTTATGAGAGAGAAAG+AGG | 0.428612 | 8_2:-22785374 | None:intergenic |
| ATATGATGTGATGTTTATCT+TGG | 0.430472 | 8_2:-22787093 | None:intergenic |
| ATATTAACTTACTTTAGCCT+TGG | 0.442247 | 8_2:-22786972 | None:intergenic |
| AAGAAGTCCACATTGAAATC+AGG | 0.442885 | 8_2:-22787134 | None:intergenic |
| GGAAGAAGCCATTGAAATTG+AGG | 0.443022 | 8_2:-22785437 | None:intergenic |
| GATGTTCCTTTAGTTGAAAG+TGG | 0.443027 | 8_2:+22787236 | Msa1240340:CDS |
| CACAAACCGTTCAAAGTTGA+AGG | 0.445330 | 8_2:+22790829 | Msa1240340:CDS |
| GTAGTTCCACTTTCAACTAA+AGG | 0.445658 | 8_2:-22787242 | None:intergenic |
| GATTGTCATTGAAGCAATCA+AGG | 0.448464 | 8_2:+22789533 | Msa1240340:CDS |
| TGTTTCGACAATCCCATGTT+GGG | 0.449554 | 8_2:+22786945 | Msa1240340:CDS |
| AACTACTGGGTTCCTTGGTC+AGG | 0.453865 | 8_2:+22787259 | Msa1240340:CDS |
| TTAGAATGCAAGATCTCAAC+CGG | 0.463025 | 8_2:-22791642 | None:intergenic |
| AAGTCTTCAACCAGGTTGCT+AGG | 0.463106 | 8_2:+22787048 | Msa1240340:intron |
| ATAAGCAGAGTGTTTCTTGC+TGG | 0.467423 | 8_2:-22790644 | None:intergenic |
| ACTGGATATGTCTTTGGAGC+TGG | 0.467879 | 8_2:-22788372 | None:intergenic |
| TTAGGCTCAAATGGCTCCAC+TGG | 0.469251 | 8_2:-22790668 | None:intergenic |
| CCGCAGAATGACATATTGTC+TGG | 0.471942 | 8_2:+22790616 | Msa1240340:intron |
| AAGATCATCAAGGCTAAGCT+TGG | 0.472669 | 8_2:+22790863 | Msa1240340:CDS |
| TAATGTTGTTCTTAATGGGC+TGG | 0.473444 | 8_2:+22787166 | Msa1240340:CDS |
| TTATAATGCCAACCTTGAAA+AGG | 0.483006 | 8_2:+22790964 | Msa1240340:CDS |
| CCCGATGGTATGGTTCTCTC+AGG | 0.484251 | 8_2:+22791315 | Msa1240340:CDS |
| TTGTGCACGAACTATTAATC+CGG | 0.488584 | 8_2:+22791623 | Msa1240340:three_prime_UTR |
| AATGATAATGCTTGTGGCGA+TGG | 0.490650 | 8_2:+22789102 | Msa1240340:CDS |
| GTTGAGTGAGAAGAAGTTGA+AGG | 0.494967 | 8_2:-22785414 | None:intergenic |
| CAACATCCTTCAACTTTGAA+CGG | 0.496977 | 8_2:-22790835 | None:intergenic |
| GATTAGTGATCCTCTCTGTC+AGG | 0.502469 | 8_2:-22791808 | None:intergenic |
| AACCAACACATACCTTTGAT+GGG | 0.507387 | 8_2:-22788413 | None:intergenic |
| TATGATGTGATGTTTATCTT+GGG | 0.509688 | 8_2:-22787092 | None:intergenic |
| AAAGTTCTCATGGTTGGTGC+TGG | 0.510374 | 8_2:+22785558 | Msa1240340:CDS |
| GTTTATCCAATTCATCAGAC+AGG | 0.510714 | 8_2:-22789062 | None:intergenic |
| GAAGAAGCCATTGAAATTGA+GGG | 0.511407 | 8_2:-22785436 | None:intergenic |
| TGCTCGATGGGAATTTAGAT+GGG | 0.511557 | 8_2:+22791574 | Msa1240340:CDS |
| TCAGGATGCAAAAGTTCTCA+TGG | 0.512135 | 8_2:+22785548 | Msa1240340:intron |
| CTTTGTCCAATGAGGAGACA+TGG | 0.515275 | 8_2:+22788998 | Msa1240340:CDS |
| AGTGGAACTACTGGGTTCCT+TGG | 0.519409 | 8_2:+22787254 | Msa1240340:CDS |
| TAACAAATTCTACAGCCAAC+TGG | 0.522537 | 8_2:-22789386 | None:intergenic |
| TTCGACTTATCAGAATCATC+AGG | 0.526169 | 8_2:-22791486 | None:intergenic |
| AGATCATCAAGGCTAAGCTT+GGG | 0.526278 | 8_2:+22790864 | Msa1240340:CDS |
| GTTCTCATGGTTGGTGCTGG+TGG | 0.527023 | 8_2:+22785561 | Msa1240340:CDS |
| GACGACCTTGTCATGCTCGA+TGG | 0.528310 | 8_2:+22791561 | Msa1240340:CDS |
| TTGTTTCGACAATCCCATGT+TGG | 0.531431 | 8_2:+22786944 | Msa1240340:CDS |
| ACGACCTTGTCATGCTCGAT+GGG | 0.531552 | 8_2:+22791562 | Msa1240340:CDS |
| GCGATTCTTTGGCCATAACC+GGG | 0.532650 | 8_2:+22791687 | Msa1240340:three_prime_UTR |
| AGAGAAAGAACCCGATGGTA+TGG | 0.532728 | 8_2:+22791305 | Msa1240340:CDS |
| TCTGAAAATGATGATGATGT+TGG | 0.533388 | 8_2:+22791432 | Msa1240340:CDS |
| AGTCTTCAACCAGGTTGCTA+GGG | 0.533554 | 8_2:+22787049 | Msa1240340:intron |
| CTATGAAGCTGGTGATATTG+AGG | 0.533747 | 8_2:+22790925 | Msa1240340:CDS |
| ACATGTGAATCGTTTGTGCT+TGG | 0.533993 | 8_2:+22787208 | Msa1240340:CDS |
| GATGAATTGGATAAACAGAA+TGG | 0.535107 | 8_2:+22789069 | Msa1240340:CDS |
| TCAAACCTCCTCTATGAAGC+TGG | 0.536148 | 8_2:+22790914 | Msa1240340:CDS |
| TGCTGTTATTGGTGCGTCTG+AGG | 0.548448 | 8_2:-22791400 | None:intergenic |
| TGAATTAGCTTTGTCCAATG+AGG | 0.549430 | 8_2:+22788990 | Msa1240340:CDS |
| CTAAGACTCCAGATATCTTG+CGG | 0.551875 | 8_2:-22789165 | None:intergenic |
| ATCATGTTATGTTTGTTCTG+AGG | 0.560644 | 8_2:+22790694 | Msa1240340:CDS |
| TCCTGAGAGAACCATACCAT+CGG | 0.562714 | 8_2:-22791316 | None:intergenic |
| CAGGAGAAGGAAGCTCAGCT+AGG | 0.563041 | 8_2:-22791058 | None:intergenic |
| TTTGAAGCATTCATGACAAG+TGG | 0.563218 | 8_2:-22790896 | None:intergenic |
| CAGGTAACAGTTCATGTCAA+AGG | 0.563874 | 8_2:+22788318 | Msa1240340:intron |
| ATGGTATGGTTCTCTCAGGA+TGG | 0.566193 | 8_2:+22791319 | Msa1240340:CDS |
| AGCCTTGGACTGCCCAACAT+GGG | 0.567033 | 8_2:-22786957 | None:intergenic |
| GCAACATTAACATAAAGCAC+AGG | 0.567973 | 8_2:+22791132 | Msa1240340:CDS |
| TGATGTTGGTATAATTTCTC+CGG | 0.575254 | 8_2:+22791446 | Msa1240340:CDS |
| CTTCATGCCCAAAGATGACA+TGG | 0.576049 | 8_2:-22789139 | None:intergenic |
| CCTGAGAGAACCATACCATC+GGG | 0.576818 | 8_2:-22791315 | None:intergenic |
| ATCCCATGTTGGGCAGTCCA+AGG | 0.579418 | 8_2:+22786955 | Msa1240340:CDS |
| GTTTGTTCACTGTATTGTGT+GGG | 0.580513 | 8_2:+22788786 | Msa1240340:intron |
| AAATTTATGAGAGAGAAAGA+GGG | 0.580793 | 8_2:-22785373 | None:intergenic |
| TAGCCTTGGACTGCCCAACA+TGG | 0.585558 | 8_2:-22786958 | None:intergenic |
| CAATATCACCAGCTTCATAG+AGG | 0.585950 | 8_2:-22790922 | None:intergenic |
| CGAATACTGCTGATGACGAA+AGG | 0.587119 | 8_2:+22791505 | Msa1240340:CDS |
| TGGTACAATGCTTACAGTAG+AGG | 0.589747 | 8_2:+22791088 | Msa1240340:CDS |
| AAGCATTCATGACAAGTGGA+AGG | 0.592994 | 8_2:-22790892 | None:intergenic |
| GGCTGGACAACCTAGATGCA+CGG | 0.596414 | 8_2:+22787183 | Msa1240340:CDS |
| GAAGACAAATCTGTTAGTAA+CGG | 0.601754 | 8_2:+22791369 | Msa1240340:CDS |
| GTACCACCAGTTACAGGAGA+AGG | 0.604017 | 8_2:-22791071 | None:intergenic |
| AGTTTGTTCACTGTATTGTG+TGG | 0.604544 | 8_2:+22788785 | Msa1240340:intron |
| CTTCCTTCTCCTGTAACTGG+TGG | 0.604762 | 8_2:+22791068 | Msa1240340:CDS |
| TATCACAAGTACCCCATCAA+AGG | 0.606863 | 8_2:+22788401 | Msa1240340:CDS |
| TATCACCAGCTTCATAGAGG+AGG | 0.611607 | 8_2:-22790919 | None:intergenic |
| GATGCAAAAGTTCTCATGGT+TGG | 0.612790 | 8_2:+22785552 | Msa1240340:CDS |
| TAGTAGCAGCATACCTAACC+CGG | 0.614142 | 8_2:-22791705 | None:intergenic |
| TGTTGTCGAAAAGATCATCA+AGG | 0.630051 | 8_2:+22790853 | Msa1240340:CDS |
| ACAATTAAATTACCTGACCA+AGG | 0.630077 | 8_2:-22787271 | None:intergenic |
| TAGTTGAAAGTGGAACTACT+GGG | 0.633402 | 8_2:+22787246 | Msa1240340:CDS |
| GTACTTGTGATAGTACAGAC+TGG | 0.633652 | 8_2:-22788390 | None:intergenic |
| ACCTAAACCTATATACAGCA+AGG | 0.641211 | 8_2:+22789035 | Msa1240340:CDS |
| AAACACTCTGCTTATGCCAG+TGG | 0.641266 | 8_2:+22790652 | Msa1240340:CDS |
| ACCAACACATACCTTTGATG+GGG | 0.643072 | 8_2:-22788412 | None:intergenic |
| CTTGCTGACTCCTGACAGAG+AGG | 0.643669 | 8_2:+22791798 | Msa1240340:three_prime_UTR |
| CTTTGATAAAGATGACCAGT+TGG | 0.646072 | 8_2:+22789371 | Msa1240340:CDS |
| CTGGACAATGATAATGCTTG+TGG | 0.650177 | 8_2:+22789096 | Msa1240340:CDS |
| AATTCCCATCGAGCATGACA+AGG | 0.652948 | 8_2:-22791566 | None:intergenic |
| TCCCAATGTACAGATTGACA+TGG | 0.657075 | 8_2:+22786886 | Msa1240340:intron |
| TGGTAACATTGTGCATGCTG+TGG | 0.672395 | 8_2:+22789482 | Msa1240340:CDS |
| GATGAAGAGAAAGAACCCGA+TGG | 0.685104 | 8_2:+22791300 | Msa1240340:CDS |
| CAAAGATCCTGATTTCAATG+TGG | 0.694264 | 8_2:+22787127 | Msa1240340:CDS |
| TGGTGATATTGAGGATGACA+TGG | 0.698545 | 8_2:+22790934 | Msa1240340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGAAATTTTGAATTT+TGG | + | chr8_2:22785689-22785708 | Msa1240340:intron | 10.0% |
| !! | ATTTAATTAAATTGTTGTAT+TGG | + | chr8_2:22785936-22785955 | Msa1240340:intron | 10.0% |
| !! | AGTATATAATATAATTACTA+TGG | - | chr8_2:22788090-22788109 | None:intergenic | 10.0% |
| !!! | TTTTGTGATATAATTTTTAT+TGG | + | chr8_2:22788292-22788311 | Msa1240340:intron | 10.0% |
| !! | AGTAAAAATTACTTTGATAA+TGG | - | chr8_2:22785461-22785480 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTGGTTTTTTTT+AGG | + | chr8_2:22785700-22785719 | Msa1240340:intron | 15.0% |
| !!! | TTGAATTTTGGTTTTTTTTA+GGG | + | chr8_2:22785701-22785720 | Msa1240340:intron | 15.0% |
| !!! | AACTGTTATTAGTTTTTAAT+TGG | + | chr8_2:22785897-22785916 | Msa1240340:intron | 15.0% |
| !!! | ATAAGACTCATTTTAATTAA+GGG | + | chr8_2:22786264-22786283 | Msa1240340:intron | 15.0% |
| !! | AATTTAATGTTGTTCTTAAT+GGG | + | chr8_2:22787162-22787181 | Msa1240340:CDS | 15.0% |
| !!! | ATATAATTTTTATTGGAAAC+AGG | + | chr8_2:22788299-22788318 | Msa1240340:intron | 15.0% |
| !! | AATTATAAAGATTACATTCA+AGG | - | chr8_2:22788542-22788561 | None:intergenic | 15.0% |
| !! | AAAATGACATTAAAAGTTAT+AGG | + | chr8_2:22789562-22789581 | Msa1240340:CDS | 15.0% |
| !!! | GTTATTTGGATTTATTTTAT+AGG | + | chr8_2:22789924-22789943 | Msa1240340:intron | 15.0% |
| !!! | GAAAATTCTAAAAATATGTT+TGG | - | chr8_2:22790449-22790468 | None:intergenic | 15.0% |
| !!! | TACTTCCTTTTTGTTTTTTT+AGG | + | chr8_2:22785648-22785667 | Msa1240340:intron | 20.0% |
| !!! | ACTTCCTTTTTGTTTTTTTA+GGG | + | chr8_2:22785649-22785668 | Msa1240340:intron | 20.0% |
| !! | AAAACCCTAAAAAAACAAAA+AGG | - | chr8_2:22785656-22785675 | None:intergenic | 20.0% |
| !!! | TAGTAAAGTTTTGAACTTTA+TGG | + | chr8_2:22785752-22785771 | Msa1240340:intron | 20.0% |
| !!! | AGTAAAGTTTTGAACTTTAT+GGG | + | chr8_2:22785753-22785772 | Msa1240340:intron | 20.0% |
| !!! | ACTCTATTGTTTGTTTTAAT+TGG | + | chr8_2:22786023-22786042 | Msa1240340:intron | 20.0% |
| !!! | CTCTATTGTTTGTTTTAATT+GGG | + | chr8_2:22786024-22786043 | Msa1240340:intron | 20.0% |
| !!! | TCTATTGTTTGTTTTAATTG+GGG | + | chr8_2:22786025-22786044 | Msa1240340:intron | 20.0% |
| !!! | GATAAGACTCATTTTAATTA+AGG | + | chr8_2:22786263-22786282 | Msa1240340:intron | 20.0% |
| !! | TATATTAACCCTGTTATTAT+TGG | + | chr8_2:22786328-22786347 | Msa1240340:intron | 20.0% |
| !! | ATATTAACCCTGTTATTATT+GGG | + | chr8_2:22786329-22786348 | Msa1240340:intron | 20.0% |
| !! | CACATAAATCATTTATTGAA+TGG | - | chr8_2:22786597-22786616 | None:intergenic | 20.0% |
| !! | CATTCAATAAATGATTTATG+TGG | + | chr8_2:22786595-22786614 | Msa1240340:intron | 20.0% |
| !!! | TTTCTTTTGAATTATCTATG+TGG | + | chr8_2:22786817-22786836 | Msa1240340:intron | 20.0% |
| !! | CAATTTAATGTTGTTCTTAA+TGG | + | chr8_2:22787161-22787180 | Msa1240340:CDS | 20.0% |
| !! | GGTAATTTAATTGTAGTTAT+TGG | + | chr8_2:22787280-22787299 | Msa1240340:intron | 20.0% |
| !!! | TCACATTGATAACAAATTTT+AGG | - | chr8_2:22787485-22787504 | None:intergenic | 20.0% |
| !!! | ATGTCAAAAGAAACATATTT+TGG | - | chr8_2:22787561-22787580 | None:intergenic | 20.0% |
| !! | TGAATAGAAATTAAGAATTC+AGG | - | chr8_2:22787612-22787631 | None:intergenic | 20.0% |
| !! | AGATATATCTATTTCCATAT+AGG | + | chr8_2:22787751-22787770 | Msa1240340:intron | 20.0% |
| !! | GATATATCTATTTCCATATA+GGG | + | chr8_2:22787752-22787771 | Msa1240340:intron | 20.0% |
| !! | ATATATCTATTTCCATATAG+GGG | + | chr8_2:22787753-22787772 | Msa1240340:intron | 20.0% |
| !! | AGTATTAAGTAAATTCTGAA+TGG | + | chr8_2:22787787-22787806 | Msa1240340:intron | 20.0% |
| !!! | GATAACAGATTTTATCAAAT+AGG | - | chr8_2:22787849-22787868 | None:intergenic | 20.0% |
| !! | TATTGCAATTAAAATCATGT+GGG | - | chr8_2:22788231-22788250 | None:intergenic | 20.0% |
| !! | ATATTGCAATTAAAATCATG+TGG | - | chr8_2:22788232-22788251 | None:intergenic | 20.0% |
| !! | AAATTTCTATGTATGAACTA+CGG | - | chr8_2:22788492-22788511 | None:intergenic | 20.0% |
| !!! | AGTTCATACATAGAAATTTT+AGG | + | chr8_2:22788493-22788512 | Msa1240340:intron | 20.0% |
| !!! | CTACTATTTTCTAAGTTATT+TGG | + | chr8_2:22788817-22788836 | Msa1240340:CDS | 20.0% |
| !! | AAAATATTTGATCACGTATT+TGG | + | chr8_2:22788958-22788977 | Msa1240340:CDS | 20.0% |
| !! | AAATATTTGATCACGTATTT+GGG | + | chr8_2:22788959-22788978 | Msa1240340:CDS | 20.0% |
| !!! | ATTTTTCACAAAAAGAGAAA+AGG | + | chr8_2:22789224-22789243 | Msa1240340:CDS | 20.0% |
| !! | GATACATCAAAAGAAATAAA+AGG | - | chr8_2:22789324-22789343 | None:intergenic | 20.0% |
| !!! | TAGATACTAACAAACTTTTT+TGG | + | chr8_2:22789726-22789745 | Msa1240340:intron | 20.0% |
| !! | ATCTTATGTTATCAAATAGT+TGG | + | chr8_2:22790126-22790145 | Msa1240340:intron | 20.0% |
| !!! | TTGTTATTGATTCTAACAAA+TGG | + | chr8_2:22790226-22790245 | Msa1240340:intron | 20.0% |
| !!! | GTTACCATTTAATAGTTTTA+AGG | - | chr8_2:22790427-22790446 | None:intergenic | 20.0% |
| !!! | GCTTTTATTCTAATCTTATT+TGG | + | chr8_2:22790588-22790607 | Msa1240340:intron | 20.0% |
| !! | AACAGGAAAAAATAAACATT+AGG | - | chr8_2:22791230-22791249 | None:intergenic | 20.0% |
| !!! | TTGCATTCTAATTTTGTATT+TGG | + | chr8_2:22791654-22791673 | Msa1240340:three_prime_UTR | 20.0% |
| ! | AAATTTATGAGAGAGAAAGA+GGG | - | chr8_2:22785376-22785395 | None:intergenic | 25.0% |
| ! | AAAATTTATGAGAGAGAAAG+AGG | - | chr8_2:22785377-22785396 | None:intergenic | 25.0% |
| !!! | CATGTTTTTAATGTCGTTTT+GGG | + | chr8_2:22785518-22785537 | Msa1240340:intron | 25.0% |
| ! | AACCATAAATCAGATCAAAA+GGG | - | chr8_2:22785985-22786004 | None:intergenic | 25.0% |
| ! | TAACCATAAATCAGATCAAA+AGG | - | chr8_2:22785986-22786005 | None:intergenic | 25.0% |
| !!! | TTTAATTGGGGAGAATTTTT+TGG | + | chr8_2:22786037-22786056 | Msa1240340:intron | 25.0% |
| !!! | TTTTTTGGTATTGGATTTTC+AGG | + | chr8_2:22786052-22786071 | Msa1240340:intron | 25.0% |
| ! | TTCACAATAATTGTGTGTTT+AGG | + | chr8_2:22786106-22786125 | Msa1240340:intron | 25.0% |
| !!! | TTGACTTTACTTGCTTTTTT+TGG | + | chr8_2:22786156-22786175 | Msa1240340:intron | 25.0% |
| !! | AGGGTTAATATATGCTTTTA+CGG | - | chr8_2:22786320-22786339 | None:intergenic | 25.0% |
| ! | TATTAACCCTGTTATTATTG+GGG | + | chr8_2:22786330-22786349 | Msa1240340:intron | 25.0% |
| !!! | CAATGTTTTAATAACTGAAC+CGG | + | chr8_2:22786361-22786380 | Msa1240340:intron | 25.0% |
| ! | CATTGAATAAATGATGTACA+TGG | - | chr8_2:22786634-22786653 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAATAGTGAC+CGG | + | chr8_2:22786669-22786688 | Msa1240340:intron | 25.0% |
| !!! | TGCAGTCTTTTAATTTATTC+TGG | - | chr8_2:22786771-22786790 | None:intergenic | 25.0% |
| ! | ATATTAACTTACTTTAGCCT+TGG | - | chr8_2:22786975-22786994 | None:intergenic | 25.0% |
| ! | TATACAAGTAACTAGAATGT+CGG | - | chr8_2:22787002-22787021 | None:intergenic | 25.0% |
| ! | TATGATGTGATGTTTATCTT+GGG | - | chr8_2:22787095-22787114 | None:intergenic | 25.0% |
| ! | ATATGATGTGATGTTTATCT+TGG | - | chr8_2:22787096-22787115 | None:intergenic | 25.0% |
| !!! | TGATTATCCTCTAAAATTTC+AGG | + | chr8_2:22788004-22788023 | Msa1240340:intron | 25.0% |
| !!! | GATTATCCTCTAAAATTTCA+GGG | + | chr8_2:22788005-22788024 | Msa1240340:intron | 25.0% |
| !!! | ATTATCCTCTAAAATTTCAG+GGG | + | chr8_2:22788006-22788025 | Msa1240340:intron | 25.0% |
| !!! | TATATACTATTGACTTGTTC+AGG | + | chr8_2:22788102-22788121 | Msa1240340:intron | 25.0% |
| ! | AAAAATCATTCAGTGCATAA+AGG | - | chr8_2:22788441-22788460 | None:intergenic | 25.0% |
| ! | ACATTCAAGGAAAATCTAAA+TGG | - | chr8_2:22788529-22788548 | None:intergenic | 25.0% |
| !! | AATTCCTTGTTATATCTTTG+TGG | + | chr8_2:22788558-22788577 | Msa1240340:intron | 25.0% |
| ! | AATAATCATATATCACCATC+TGG | + | chr8_2:22789284-22789303 | Msa1240340:intron | 25.0% |
| !!! | AAAGTTTGTTAGTATCTAGA+AGG | - | chr8_2:22789724-22789743 | None:intergenic | 25.0% |
| !!! | ATACTAACAAACTTTTTTGG+TGG | + | chr8_2:22789729-22789748 | Msa1240340:intron | 25.0% |
| ! | CTAAAATCAAAAAGAGAATG+AGG | - | chr8_2:22790090-22790109 | None:intergenic | 25.0% |
| ! | TTGTTAGAATCAATAACAAC+AGG | - | chr8_2:22790225-22790244 | None:intergenic | 25.0% |
| ! | AACAGAATAAGAAAAGAATG+TGG | - | chr8_2:22790371-22790390 | None:intergenic | 25.0% |
| ! | AGCTCCTTAAAACTATTAAA+TGG | + | chr8_2:22790420-22790439 | Msa1240340:intron | 25.0% |
| ! | TTAGAACAGAATTTATTCTC+GGG | - | chr8_2:22790471-22790490 | None:intergenic | 25.0% |
| ! | CTTAGAACAGAATTTATTCT+CGG | - | chr8_2:22790472-22790491 | None:intergenic | 25.0% |
| ! | TGAACAGAAAATACTATTCA+CGG | - | chr8_2:22790498-22790517 | None:intergenic | 25.0% |
| !!! | CAAACATAACATGATTTGTT+AGG | - | chr8_2:22790689-22790708 | None:intergenic | 25.0% |
| !!! | TACATTGACTTTAAAGTACT+AGG | - | chr8_2:22790742-22790761 | None:intergenic | 25.0% |
| ! | AGAAAACAATTCAGAATAAC+AGG | - | chr8_2:22791247-22791266 | None:intergenic | 25.0% |
| !! | TCTGAATTGTTTTCTTTTGT+TGG | + | chr8_2:22791252-22791271 | Msa1240340:intron | 25.0% |
| !! | TCTAATTTTGTATTTGGTAG+AGG | + | chr8_2:22791660-22791679 | Msa1240340:three_prime_UTR | 25.0% |
| ! | AACTTCTGTTAACTAATATC+AGG | - | chr8_2:22791855-22791874 | None:intergenic | 25.0% |
| !! | TTAACAGAAGTTTTGCAAAT+TGG | + | chr8_2:22791863-22791882 | Msa1240340:three_prime_UTR | 25.0% |
| !! | GCATGTTTTTAATGTCGTTT+TGG | + | chr8_2:22785517-22785536 | Msa1240340:intron | 30.0% |
| !! | ACTTTATGGGTTTTGTCAAA+TGG | + | chr8_2:22785766-22785785 | Msa1240340:intron | 30.0% |
| !! | CTTTATGGGTTTTGTCAAAT+GGG | + | chr8_2:22785767-22785786 | Msa1240340:intron | 30.0% |
| GAAACTGAAACGCAAAATTA+TGG | - | chr8_2:22785798-22785817 | None:intergenic | 30.0% | |
| ! | TTCCCTTTTGATCTGATTTA+TGG | + | chr8_2:22785980-22785999 | Msa1240340:intron | 30.0% |
| !!! | TCAGGTGTTTTGTTTTAGTA+AGG | + | chr8_2:22786070-22786089 | Msa1240340:intron | 30.0% |
| !! | TGTGTTTAGGTTGAAATGTT+TGG | + | chr8_2:22786119-22786138 | Msa1240340:intron | 30.0% |
| !! | GTGTTTAGGTTGAAATGTTT+GGG | + | chr8_2:22786120-22786139 | Msa1240340:intron | 30.0% |
| !!! | TACTTGCTTTTTTTGGCAAT+TGG | + | chr8_2:22786163-22786182 | Msa1240340:intron | 30.0% |
| TGTTGGCAATGATGAAAATA+GGG | + | chr8_2:22786186-22786205 | Msa1240340:intron | 30.0% | |
| ! | TAGGGTATTTATTACACGTT+TGG | + | chr8_2:22786204-22786223 | Msa1240340:intron | 30.0% |
| ATTTATTACACGTTTGGTTG+TGG | + | chr8_2:22786210-22786229 | Msa1240340:intron | 30.0% | |
| ! | TGAGTCTTATCTTACAACTT+GGG | - | chr8_2:22786254-22786273 | None:intergenic | 30.0% |
| ! | ATGAGTCTTATCTTACAACT+TGG | - | chr8_2:22786255-22786274 | None:intergenic | 30.0% |
| ATTAACCCTGTTATTATTGG+GGG | + | chr8_2:22786331-22786350 | Msa1240340:intron | 30.0% | |
| CGGTTCAGTTATTAAAACAT+TGG | - | chr8_2:22786363-22786382 | None:intergenic | 30.0% | |
| !!! | TGGGTTGGTTTTTAAATCAT+TGG | + | chr8_2:22786517-22786536 | Msa1240340:intron | 30.0% |
| ! | GACATTCTAGTTACTTGTAT+AGG | + | chr8_2:22787001-22787020 | Msa1240340:intron | 30.0% |
| !!! | GGGATGCTGTTTTAAAATTT+AGG | + | chr8_2:22787069-22787088 | Msa1240340:CDS | 30.0% |
| ACAATTAAATTACCTGACCA+AGG | - | chr8_2:22787274-22787293 | None:intergenic | 30.0% | |
| !! | AATTGTAGTTATTGGCTTCT+TGG | + | chr8_2:22787288-22787307 | Msa1240340:intron | 30.0% |
| TAGATAATCAATCTTTCGAG+TGG | + | chr8_2:22787531-22787550 | Msa1240340:intron | 30.0% | |
| ! | AGATAATCAATCTTTCGAGT+GGG | + | chr8_2:22787532-22787551 | Msa1240340:intron | 30.0% |
| ! | GTGTGTAGTTATTGTTTTCT+TGG | + | chr8_2:22787726-22787745 | Msa1240340:intron | 30.0% |
| TAGATAATCGATCTTCTGAT+TGG | + | chr8_2:22787902-22787921 | Msa1240340:intron | 30.0% | |
| AGATAATCGATCTTCTGATT+GGG | + | chr8_2:22787903-22787922 | Msa1240340:intron | 30.0% | |
| GAAGACATGAAGTATGTAAA+AGG | - | chr8_2:22787945-22787964 | None:intergenic | 30.0% | |
| ATAGAAACAGTATGAAGAAG+AGG | - | chr8_2:22788035-22788054 | None:intergenic | 30.0% | |
| !!! | TTTTTTACCTCCTAGTTTTG+TGG | + | chr8_2:22788151-22788170 | Msa1240340:intron | 30.0% |
| CATAGAACATATGATGCAAT+AGG | + | chr8_2:22788465-22788484 | Msa1240340:intron | 30.0% | |
| !! | TAGAAATTTTAGGCATTGCA+TGG | + | chr8_2:22788503-22788522 | Msa1240340:intron | 30.0% |
| TGATCCACAAAGATATAACA+AGG | - | chr8_2:22788565-22788584 | None:intergenic | 30.0% | |
| ATATAACTAATGAGTGCCTT+CGG | - | chr8_2:22788623-22788642 | None:intergenic | 30.0% | |
| TGTCAAATTGAACATCAACT+AGG | + | chr8_2:22788690-22788709 | Msa1240340:intron | 30.0% | |
| GATGAATTGGATAAACAGAA+TGG | + | chr8_2:22789069-22789088 | Msa1240340:CDS | 30.0% | |
| TTCACAAAAAGAGAAAAGGT+TGG | + | chr8_2:22789228-22789247 | Msa1240340:intron | 30.0% | |
| ! | TTTTGATGTATCTTTTGAGC+AGG | + | chr8_2:22789332-22789351 | Msa1240340:intron | 30.0% |
| GCTTCAAAAAGACTATGTAA+AGG | - | chr8_2:22789450-22789469 | None:intergenic | 30.0% | |
| !!! | CATAGTCTTTTTGAAGCTAA+AGG | + | chr8_2:22789453-22789472 | Msa1240340:CDS | 30.0% |
| !!! | TAACAAACTTTTTTGGTGGT+GGG | + | chr8_2:22789733-22789752 | Msa1240340:intron | 30.0% |
| TGCATGTAAGAATTTACTCT+CGG | + | chr8_2:22789791-22789810 | Msa1240340:intron | 30.0% | |
| TTATAGGCAATTTAAGTAGC+TGG | + | chr8_2:22789940-22789959 | Msa1240340:intron | 30.0% | |
| TGAATCATGAATGTAAGCTA+AGG | - | chr8_2:22790005-22790024 | None:intergenic | 30.0% | |
| CTGCATAAACTGAAAATAAC+AGG | - | chr8_2:22790059-22790078 | None:intergenic | 30.0% | |
| ACAACAGGACTATTATTTCA+AGG | - | chr8_2:22790210-22790229 | None:intergenic | 30.0% | |
| !! | GAGTTACTTTGAAATAACCA+CGG | + | chr8_2:22790320-22790339 | Msa1240340:intron | 30.0% |
| ATCATGTTATGTTTGTTCTG+AGG | + | chr8_2:22790694-22790713 | Msa1240340:CDS | 30.0% | |
| ! | TTTAAAGTACTAGGTGAGAA+AGG | - | chr8_2:22790733-22790752 | None:intergenic | 30.0% |
| GTGTTTATTTCAAGCAATAC+AGG | - | chr8_2:22790812-22790831 | None:intergenic | 30.0% | |
| TTATAATGCCAACCTTGAAA+AGG | + | chr8_2:22790964-22790983 | Msa1240340:CDS | 30.0% | |
| CCTGAACAGAATAGTAAAAA+TGG | - | chr8_2:22791037-22791056 | None:intergenic | 30.0% | |
| !! | CCATTTTTACTATTCTGTTC+AGG | + | chr8_2:22791034-22791053 | Msa1240340:intron | 30.0% |
| GAAGACAAATCTGTTAGTAA+CGG | + | chr8_2:22791369-22791388 | Msa1240340:CDS | 30.0% | |
| ! | GATTTTTCTACTGCTGTTAT+TGG | - | chr8_2:22791414-22791433 | None:intergenic | 30.0% |
| ! | TCTGAAAATGATGATGATGT+TGG | + | chr8_2:22791432-22791451 | Msa1240340:CDS | 30.0% |
| TGATGTTGGTATAATTTCTC+CGG | + | chr8_2:22791446-22791465 | Msa1240340:CDS | 30.0% | |
| ! | TTTTGTATTTGGTAGAGGTT+TGG | + | chr8_2:22791665-22791684 | Msa1240340:three_prime_UTR | 30.0% |
| GAAGAAGCCATTGAAATTGA+GGG | - | chr8_2:22785439-22785458 | None:intergenic | 35.0% | |
| GACGAAAGTGAATAAGAAGA+AGG | - | chr8_2:22785492-22785511 | None:intergenic | 35.0% | |
| !!! | TTTTAGGGTTTTCTGCACTT+CGG | + | chr8_2:22785716-22785735 | Msa1240340:intron | 35.0% |
| !!! | TGGGGAGAATTTTTTGGTAT+TGG | + | chr8_2:22786043-22786062 | Msa1240340:intron | 35.0% |
| !!! | CTTTTTTTGGCAATTGGTGT+TGG | + | chr8_2:22786169-22786188 | Msa1240340:intron | 35.0% |
| ! | GTGTTGGCAATGATGAAAAT+AGG | + | chr8_2:22786185-22786204 | Msa1240340:intron | 35.0% |
| ! | ATTAAGGGTAGTTTGTAGTG+TGG | + | chr8_2:22786279-22786298 | Msa1240340:intron | 35.0% |
| ACTAACCCCCAATAATAACA+GGG | - | chr8_2:22786339-22786358 | None:intergenic | 35.0% | |
| TACTAACCCCCAATAATAAC+AGG | - | chr8_2:22786340-22786359 | None:intergenic | 35.0% | |
| TTATTTGAACAGTTCAACCG+TGG | - | chr8_2:22786450-22786469 | None:intergenic | 35.0% | |
| TCAAATAACCAAACCGTAGA+CGG | + | chr8_2:22786462-22786481 | Msa1240340:intron | 35.0% | |
| TTCAACCGTTTGAATTGTCT+GGG | + | chr8_2:22786498-22786517 | Msa1240340:intron | 35.0% | |
| !!! | ATCTATGTGGTTTTAAGCCA+TGG | + | chr8_2:22786830-22786849 | Msa1240340:intron | 35.0% |
| AATGTAATAAAGCGCATCCA+TGG | - | chr8_2:22786850-22786869 | None:intergenic | 35.0% | |
| TCCATGTCAATCTGTACATT+GGG | - | chr8_2:22786890-22786909 | None:intergenic | 35.0% | |
| GAAACAAAAACTGTCTGTTC+AGG | - | chr8_2:22786931-22786950 | None:intergenic | 35.0% | |
| TGGTTGAAGACTTAATCAGA+TGG | - | chr8_2:22787041-22787060 | None:intergenic | 35.0% | |
| ATCTGATTAAGTCTTCAACC+AGG | + | chr8_2:22787040-22787059 | Msa1240340:intron | 35.0% | |
| CAAAGATCCTGATTTCAATG+TGG | + | chr8_2:22787127-22787146 | Msa1240340:CDS | 35.0% | |
| AAGAAGTCCACATTGAAATC+AGG | - | chr8_2:22787137-22787156 | None:intergenic | 35.0% | |
| ! | TAATGTTGTTCTTAATGGGC+TGG | + | chr8_2:22787166-22787185 | Msa1240340:CDS | 35.0% |
| GATGTTCCTTTAGTTGAAAG+TGG | + | chr8_2:22787236-22787255 | Msa1240340:CDS | 35.0% | |
| GTAGTTCCACTTTCAACTAA+AGG | - | chr8_2:22787245-22787264 | None:intergenic | 35.0% | |
| TTAGTTGAAAGTGGAACTAC+TGG | + | chr8_2:22787245-22787264 | Msa1240340:CDS | 35.0% | |
| TAGTTGAAAGTGGAACTACT+GGG | + | chr8_2:22787246-22787265 | Msa1240340:CDS | 35.0% | |
| !!! | TTGTGTTTTTTCTTGCTCGA+TGG | + | chr8_2:22787393-22787412 | Msa1240340:intron | 35.0% |
| GTGAATAGAGATTAAGAGCT+CGG | - | chr8_2:22787984-22788003 | None:intergenic | 35.0% | |
| AAATAAGTTTCAAAGACCGC+CGG | - | chr8_2:22788179-22788198 | None:intergenic | 35.0% | |
| AACCAACACATACCTTTGAT+GGG | - | chr8_2:22788416-22788435 | None:intergenic | 35.0% | |
| AAACCAACACATACCTTTGA+TGG | - | chr8_2:22788417-22788436 | None:intergenic | 35.0% | |
| ! | AGTTTGTTCACTGTATTGTG+TGG | + | chr8_2:22788785-22788804 | Msa1240340:intron | 35.0% |
| GTTTGTTCACTGTATTGTGT+GGG | + | chr8_2:22788786-22788805 | Msa1240340:intron | 35.0% | |
| !!! | CTCTATGTTTTTTGATGAGC+TGG | - | chr8_2:22788890-22788909 | None:intergenic | 35.0% |
| CAGCTCATCAAAAAACATAG+AGG | + | chr8_2:22788888-22788907 | Msa1240340:CDS | 35.0% | |
| GATGAAGACATCAGTCAATA+TGG | + | chr8_2:22788931-22788950 | Msa1240340:CDS | 35.0% | |
| !! | TGAATTAGCTTTGTCCAATG+AGG | + | chr8_2:22788990-22789009 | Msa1240340:CDS | 35.0% |
| ! | ATTTTTCCATGTCTCCTCAT+TGG | - | chr8_2:22789007-22789026 | None:intergenic | 35.0% |
| ACCTAAACCTATATACAGCA+AGG | + | chr8_2:22789035-22789054 | Msa1240340:CDS | 35.0% | |
| ! | TCCTTGCTGTATATAGGTTT+AGG | - | chr8_2:22789039-22789058 | None:intergenic | 35.0% |
| GTTTATCCAATTCATCAGAC+AGG | - | chr8_2:22789065-22789084 | None:intergenic | 35.0% | |
| GGATAAACAGAATGGAAATC+TGG | + | chr8_2:22789077-22789096 | Msa1240340:CDS | 35.0% | |
| ATCACCATCTGGAAACTTAA+CGG | + | chr8_2:22789295-22789314 | Msa1240340:intron | 35.0% | |
| ! | GTATCTTTTGAGCAGGATAT+TGG | + | chr8_2:22789339-22789358 | Msa1240340:intron | 35.0% |
| CTTTGATAAAGATGACCAGT+TGG | + | chr8_2:22789371-22789390 | Msa1240340:CDS | 35.0% | |
| TAACAAATTCTACAGCCAAC+TGG | - | chr8_2:22789389-22789408 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTAAAGGAATTGC+TGG | + | chr8_2:22789462-22789481 | Msa1240340:CDS | 35.0% |
| ACAACAAATGCTGTTATTGC+TGG | + | chr8_2:22789507-22789526 | Msa1240340:CDS | 35.0% | |
| GATTGTCATTGAAGCAATCA+AGG | + | chr8_2:22789533-22789552 | Msa1240340:CDS | 35.0% | |
| AACGGATAAGTTAGAGAAAG+CGG | - | chr8_2:22789599-22789618 | None:intergenic | 35.0% | |
| ! | CTAACTTATCCGTTTTGCAT+TGG | + | chr8_2:22789605-22789624 | Msa1240340:intron | 35.0% |
| TCACTACATCCAATGCAAAA+CGG | - | chr8_2:22789617-22789636 | None:intergenic | 35.0% | |
| ! | TGACTGTGTTACTGTATGTT+TGG | + | chr8_2:22789645-22789664 | Msa1240340:intron | 35.0% |
| ! | GACTGTGTTACTGTATGTTT+GGG | + | chr8_2:22789646-22789665 | Msa1240340:intron | 35.0% |
| ! | ACTGTGTTACTGTATGTTTG+GGG | + | chr8_2:22789647-22789666 | Msa1240340:intron | 35.0% |
| GTGTCAAACAATATACCTTG+AGG | + | chr8_2:22789689-22789708 | Msa1240340:intron | 35.0% | |
| !!! | AGAAGGTAGTTTTTTCCTCA+AGG | - | chr8_2:22789707-22789726 | None:intergenic | 35.0% |
| !!! | CTAACAAACTTTTTTGGTGG+TGG | + | chr8_2:22789732-22789751 | Msa1240340:intron | 35.0% |
| !!! | AACAAACTTTTTTGGTGGTG+GGG | + | chr8_2:22789734-22789753 | Msa1240340:intron | 35.0% |
| TAGTTGAAGCTGTTTACTTG+AGG | + | chr8_2:22789901-22789920 | Msa1240340:intron | 35.0% | |
| AGTTGAAGCTGTTTACTTGA+GGG | + | chr8_2:22789902-22789921 | Msa1240340:intron | 35.0% | |
| CTGTTTACTTGAGGGTTATT+TGG | + | chr8_2:22789910-22789929 | Msa1240340:intron | 35.0% | |
| GCTTATGATAATAAGCCATC+TGG | - | chr8_2:22790037-22790056 | None:intergenic | 35.0% | |
| GGAATGCAGTATTCTGTATT+TGG | + | chr8_2:22790178-22790197 | Msa1240340:intron | 35.0% | |
| ATAAACAGCGAGCAAAACAT+GGG | - | chr8_2:22790258-22790277 | None:intergenic | 35.0% | |
| AATAAACAGCGAGCAAAACA+TGG | - | chr8_2:22790259-22790278 | None:intergenic | 35.0% | |
| ! | AGGGATATCATGTTTTTCCA+TGG | + | chr8_2:22790291-22790310 | Msa1240340:intron | 35.0% |
| ! | GGGATATCATGTTTTTCCAT+GGG | + | chr8_2:22790292-22790311 | Msa1240340:intron | 35.0% |
| !! | CATGATTTGTTAGGCTCAAA+TGG | - | chr8_2:22790680-22790699 | None:intergenic | 35.0% |
| ACTCACCATGTTCAAATATG+TGG | + | chr8_2:22790776-22790795 | Msa1240340:intron | 35.0% | |
| CTCACCATGTTCAAATATGT+GGG | + | chr8_2:22790777-22790796 | Msa1240340:intron | 35.0% | |
| GTTTCCCACATATTTGAACA+TGG | - | chr8_2:22790784-22790803 | None:intergenic | 35.0% | |
| CAACATCCTTCAACTTTGAA+CGG | - | chr8_2:22790838-22790857 | None:intergenic | 35.0% | |
| TGTTGTCGAAAAGATCATCA+AGG | + | chr8_2:22790853-22790872 | Msa1240340:CDS | 35.0% | |
| ! | TTTGAAGCATTCATGACAAG+TGG | - | chr8_2:22790899-22790918 | None:intergenic | 35.0% |
| !! | ACAAGAAGCATACCTTTTCA+AGG | - | chr8_2:22790979-22790998 | None:intergenic | 35.0% |
| ! | AAGGTATGCTTCTTGTCTTT+TGG | + | chr8_2:22790983-22791002 | Msa1240340:intron | 35.0% |
| ! | TACAGTAGAGGATTTTCAAC+AGG | + | chr8_2:22791100-22791119 | Msa1240340:CDS | 35.0% |
| GCAACATTAACATAAAGCAC+AGG | + | chr8_2:22791132-22791151 | Msa1240340:CDS | 35.0% | |
| TCAAGATGCAAGAAGGAAAT+GGG | - | chr8_2:22791177-22791196 | None:intergenic | 35.0% | |
| TTCAAGATGCAAGAAGGAAA+TGG | - | chr8_2:22791178-22791197 | None:intergenic | 35.0% | |
| CCATAATTCAAGATGCAAGA+AGG | - | chr8_2:22791184-22791203 | None:intergenic | 35.0% | |
| CCTTCTTGCATCTTGAATTA+TGG | + | chr8_2:22791181-22791200 | Msa1240340:intron | 35.0% | |
| TGGTGACTTTAAATTCAGAG+AGG | + | chr8_2:22791272-22791291 | Msa1240340:intron | 35.0% | |
| TTCGACTTATCAGAATCATC+AGG | - | chr8_2:22791489-22791508 | None:intergenic | 35.0% | |
| TTGTGCACGAACTATTAATC+CGG | + | chr8_2:22791623-22791642 | Msa1240340:three_prime_UTR | 35.0% | |
| TTAGAATGCAAGATCTCAAC+CGG | - | chr8_2:22791645-22791664 | None:intergenic | 35.0% | |
| !!! | CTGCTACTAGTTTTCTGATT+CGG | + | chr8_2:22791719-22791738 | Msa1240340:three_prime_UTR | 35.0% |
| GTTGAGTGAGAAGAAGTTGA+AGG | - | chr8_2:22785417-22785436 | None:intergenic | 40.0% | |
| CACTCAACCCTCAATTTCAA+TGG | + | chr8_2:22785429-22785448 | Msa1240340:exon | 40.0% | |
| GGAAGAAGCCATTGAAATTG+AGG | - | chr8_2:22785440-22785459 | None:intergenic | 40.0% | |
| !!! | GTCGTTTTGGGTTTTCTTTC+AGG | + | chr8_2:22785530-22785549 | Msa1240340:intron | 40.0% |
| TCAGGATGCAAAAGTTCTCA+TGG | + | chr8_2:22785548-22785567 | Msa1240340:intron | 40.0% | |
| GATGCAAAAGTTCTCATGGT+TGG | + | chr8_2:22785552-22785571 | Msa1240340:CDS | 40.0% | |
| !! | TTTAGGGTTTTCTGCACTTC+GGG | + | chr8_2:22785717-22785736 | Msa1240340:intron | 40.0% |
| GAATTGTCAAGTGTGAGTGT+TGG | + | chr8_2:22785852-22785871 | Msa1240340:intron | 40.0% | |
| GTTGTTGAACCATGAACCAA+AGG | - | chr8_2:22786401-22786420 | None:intergenic | 40.0% | |
| AACTTTAACTCGCTTGAACC+TGG | + | chr8_2:22786418-22786437 | Msa1240340:intron | 40.0% | |
| GTTCAACCGTTTGAATTGTC+TGG | + | chr8_2:22786497-22786516 | Msa1240340:intron | 40.0% | |
| ACCAACCCAGACAATTCAAA+CGG | - | chr8_2:22786506-22786525 | None:intergenic | 40.0% | |
| GGTTAATACTTTACACCCTC+TGG | + | chr8_2:22786538-22786557 | Msa1240340:intron | 40.0% | |
| TGCTTATAACAGTGACCAGA+GGG | - | chr8_2:22786556-22786575 | None:intergenic | 40.0% | |
| TTGCTTATAACAGTGACCAG+AGG | - | chr8_2:22786557-22786576 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | + | chr8_2:22786672-22786691 | Msa1240340:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | + | chr8_2:22786673-22786692 | Msa1240340:intron | 40.0% | |
| TCCCAATGTACAGATTGACA+TGG | + | chr8_2:22786886-22786905 | Msa1240340:intron | 40.0% | |
| GTCCATGTCAATCTGTACAT+TGG | - | chr8_2:22786891-22786910 | None:intergenic | 40.0% | |
| TTGTTTCGACAATCCCATGT+TGG | + | chr8_2:22786944-22786963 | Msa1240340:CDS | 40.0% | |
| TGTTTCGACAATCCCATGTT+GGG | + | chr8_2:22786945-22786964 | Msa1240340:CDS | 40.0% | |
| ACATGTGAATCGTTTGTGCT+TGG | + | chr8_2:22787208-22787227 | Msa1240340:CDS | 40.0% | |
| TGCTAAACACAACCCCTATA+TGG | - | chr8_2:22787768-22787787 | None:intergenic | 40.0% | |
| AATAAGTTTCAAAGACCGCC+GGG | - | chr8_2:22788178-22788197 | None:intergenic | 40.0% | |
| CAGGTAACAGTTCATGTCAA+AGG | + | chr8_2:22788318-22788337 | Msa1240340:intron | 40.0% | |
| !! | TATGTCTTTGGAGCTGGTTT+AGG | - | chr8_2:22788369-22788388 | None:intergenic | 40.0% |
| GTACAGACTGGATATGTCTT+TGG | - | chr8_2:22788381-22788400 | None:intergenic | 40.0% | |
| GTACTTGTGATAGTACAGAC+TGG | - | chr8_2:22788393-22788412 | None:intergenic | 40.0% | |
| TATCACAAGTACCCCATCAA+AGG | + | chr8_2:22788401-22788420 | Msa1240340:CDS | 40.0% | |
| ACCAACACATACCTTTGATG+GGG | - | chr8_2:22788415-22788434 | None:intergenic | 40.0% | |
| GTTAGACTGTAACTGACTAC+TGG | - | chr8_2:22788594-22788613 | None:intergenic | 40.0% | |
| ACAGTCTAACCTATTACCGA+AGG | + | chr8_2:22788604-22788623 | Msa1240340:intron | 40.0% | |
| TAATGAGTGCCTTCGGTAAT+AGG | - | chr8_2:22788616-22788635 | None:intergenic | 40.0% | |
| ! | AGGACATCCTTGCTGTATAT+AGG | - | chr8_2:22789045-22789064 | None:intergenic | 40.0% |
| ! | CTGGACAATGATAATGCTTG+TGG | + | chr8_2:22789096-22789115 | Msa1240340:CDS | 40.0% |
| ! | AATGATAATGCTTGTGGCGA+TGG | + | chr8_2:22789102-22789121 | Msa1240340:CDS | 40.0% |
| AGTTTCTGCCATGTCATCTT+TGG | + | chr8_2:22789131-22789150 | Msa1240340:CDS | 40.0% | |
| GTTTCTGCCATGTCATCTTT+GGG | + | chr8_2:22789132-22789151 | Msa1240340:CDS | 40.0% | |
| TAAGACTCCAGATATCTTGC+GGG | - | chr8_2:22789167-22789186 | None:intergenic | 40.0% | |
| CTAAGACTCCAGATATCTTG+CGG | - | chr8_2:22789168-22789187 | None:intergenic | 40.0% | |
| GTCTGATTTCACACTCTGAT+GGG | + | chr8_2:22789250-22789269 | Msa1240340:intron | 40.0% | |
| TCACCATCTGGAAACTTAAC+GGG | + | chr8_2:22789296-22789315 | Msa1240340:intron | 40.0% | |
| !! | AACATACGTGCTGCTTCATT+TGG | + | chr8_2:22789420-22789439 | Msa1240340:CDS | 40.0% |
| AGCTAAGGACAGCTTATATC+AGG | - | chr8_2:22789990-22790009 | None:intergenic | 40.0% | |
| GATTCATAAGCTTCTCCAGA+TGG | + | chr8_2:22790019-22790038 | Msa1240340:intron | 40.0% | |
| !! | ATAGTTGGTGATGTTTCTGC+TGG | + | chr8_2:22790141-22790160 | Msa1240340:intron | 40.0% |
| ! | CTGCTGGTTGTAGAATTGTT+AGG | + | chr8_2:22790157-22790176 | Msa1240340:intron | 40.0% |
| TGTTTATTCCTACGAGTAGG+AGG | + | chr8_2:22790271-22790290 | Msa1240340:intron | 40.0% | |
| GTTTATTCCTACGAGTAGGA+GGG | + | chr8_2:22790272-22790291 | Msa1240340:intron | 40.0% | |
| ! | ATCATGTTTTTCCATGGGCA+TGG | + | chr8_2:22790297-22790316 | Msa1240340:intron | 40.0% |
| ! | TCATGTTTTTCCATGGGCAT+GGG | + | chr8_2:22790298-22790317 | Msa1240340:intron | 40.0% |
| CGTCAGAGAGAAAATCATCA+CGG | - | chr8_2:22790530-22790549 | None:intergenic | 40.0% | |
| CCAGACAATATGTCATTCTG+CGG | - | chr8_2:22790619-22790638 | None:intergenic | 40.0% | |
| ! | ATAAGCAGAGTGTTTCTTGC+TGG | - | chr8_2:22790647-22790666 | None:intergenic | 40.0% |
| CACAAACCGTTCAAAGTTGA+AGG | + | chr8_2:22790829-22790848 | Msa1240340:CDS | 40.0% | |
| AAGATCATCAAGGCTAAGCT+TGG | + | chr8_2:22790863-22790882 | Msa1240340:CDS | 40.0% | |
| AGATCATCAAGGCTAAGCTT+GGG | + | chr8_2:22790864-22790883 | Msa1240340:CDS | 40.0% | |
| AAGCATTCATGACAAGTGGA+AGG | - | chr8_2:22790895-22790914 | None:intergenic | 40.0% | |
| CAATATCACCAGCTTCATAG+AGG | - | chr8_2:22790925-22790944 | None:intergenic | 40.0% | |
| CTATGAAGCTGGTGATATTG+AGG | + | chr8_2:22790925-22790944 | Msa1240340:CDS | 40.0% | |
| TGGTGATATTGAGGATGACA+TGG | + | chr8_2:22790934-22790953 | Msa1240340:CDS | 40.0% | |
| !! | GAAGCATACCTTTTCAAGGT+TGG | - | chr8_2:22790975-22790994 | None:intergenic | 40.0% |
| TGGTACAATGCTTACAGTAG+AGG | + | chr8_2:22791088-22791107 | Msa1240340:CDS | 40.0% | |
| ! | GGAAGCTTTCTTTTCTTCAC+CGG | - | chr8_2:22791468-22791487 | None:intergenic | 40.0% |
| ATGCTCGATGGGAATTTAGA+TGG | + | chr8_2:22791573-22791592 | Msa1240340:CDS | 40.0% | |
| TGCTCGATGGGAATTTAGAT+GGG | + | chr8_2:22791574-22791593 | Msa1240340:CDS | 40.0% | |
| ! | TGTTCTTGTGCTTTTCTCTG+TGG | + | chr8_2:22791757-22791776 | Msa1240340:three_prime_UTR | 40.0% |
| ! | AAAGTTCTCATGGTTGGTGC+TGG | + | chr8_2:22785558-22785577 | Msa1240340:CDS | 45.0% |
| CTCAAAACTCTTGCTCTCTC+TGG | + | chr8_2:22785600-22785619 | Msa1240340:CDS | 45.0% | |
| ! | AAAGGTCTTGGTTCGATGTC+CGG | - | chr8_2:22786383-22786402 | None:intergenic | 45.0% |
| ! | GAACCAAGACCTTTGGTTCA+TGG | + | chr8_2:22786389-22786408 | Msa1240340:intron | 45.0% |
| GAACCATGAACCAAAGGTCT+TGG | - | chr8_2:22786395-22786414 | None:intergenic | 45.0% | |
| CTTGAACCTGGACAAAACCA+CGG | + | chr8_2:22786430-22786449 | Msa1240340:intron | 45.0% | |
| ACCGTTTGAATTGTCTGGGT+TGG | + | chr8_2:22786502-22786521 | Msa1240340:intron | 45.0% | |
| AGGTGTAGGTGATAAGCTTG+TGG | + | chr8_2:22786707-22786726 | Msa1240340:intron | 45.0% | |
| GGTGTAGGTGATAAGCTTGT+GGG | + | chr8_2:22786708-22786727 | Msa1240340:intron | 45.0% | |
| GTGTAGGTGATAAGCTTGTG+GGG | + | chr8_2:22786709-22786728 | Msa1240340:intron | 45.0% | |
| AAGTCTTCAACCAGGTTGCT+AGG | + | chr8_2:22787048-22787067 | Msa1240340:intron | 45.0% | |
| AGTCTTCAACCAGGTTGCTA+GGG | + | chr8_2:22787049-22787068 | Msa1240340:intron | 45.0% | |
| ! | GGTGTCCCCTGAAATTTTAG+AGG | - | chr8_2:22788014-22788033 | None:intergenic | 45.0% |
| ATAAGTTTCAAAGACCGCCG+GGG | - | chr8_2:22788177-22788196 | None:intergenic | 45.0% | |
| !! | ACTGGATATGTCTTTGGAGC+TGG | - | chr8_2:22788375-22788394 | None:intergenic | 45.0% |
| ! | ACCCCATCAAAGGTATGTGT+TGG | + | chr8_2:22788411-22788430 | Msa1240340:intron | 45.0% |
| CTTTGTCCAATGAGGAGACA+TGG | + | chr8_2:22788998-22789017 | Msa1240340:CDS | 45.0% | |
| GGATGTCCTGTCTGATGAAT+TGG | + | chr8_2:22789056-22789075 | Msa1240340:CDS | 45.0% | |
| CTTCATGCCCAAAGATGACA+TGG | - | chr8_2:22789142-22789161 | None:intergenic | 45.0% | |
| TGAAGAACCCGCAAGATATC+TGG | + | chr8_2:22789157-22789176 | Msa1240340:CDS | 45.0% | |
| GGTCTGATTTCACACTCTGA+TGG | + | chr8_2:22789249-22789268 | Msa1240340:intron | 45.0% | |
| GTTCCCGTTAAGTTTCCAGA+TGG | - | chr8_2:22789302-22789321 | None:intergenic | 45.0% | |
| TGGTAACATTGTGCATGCTG+TGG | + | chr8_2:22789482-22789501 | Msa1240340:CDS | 45.0% | |
| CGCTGTTTATTCCTACGAGT+AGG | + | chr8_2:22790268-22790287 | Msa1240340:intron | 45.0% | |
| ATGATATCCCTCCTACTCGT+AGG | - | chr8_2:22790282-22790301 | None:intergenic | 45.0% | |
| CCGCAGAATGACATATTGTC+TGG | + | chr8_2:22790616-22790635 | Msa1240340:intron | 45.0% | |
| AAACACTCTGCTTATGCCAG+TGG | + | chr8_2:22790652-22790671 | Msa1240340:CDS | 45.0% | |
| TCAAACCTCCTCTATGAAGC+TGG | + | chr8_2:22790914-22790933 | Msa1240340:CDS | 45.0% | |
| TATCACCAGCTTCATAGAGG+AGG | - | chr8_2:22790922-22790941 | None:intergenic | 45.0% | |
| AGCATTGTACCACCAGTTAC+AGG | - | chr8_2:22791080-22791099 | None:intergenic | 45.0% | |
| GATGAAGAGAAAGAACCCGA+TGG | + | chr8_2:22791300-22791319 | Msa1240340:CDS | 45.0% | |
| AGAGAAAGAACCCGATGGTA+TGG | + | chr8_2:22791305-22791324 | Msa1240340:CDS | 45.0% | |
| TCCTGAGAGAACCATACCAT+CGG | - | chr8_2:22791319-22791338 | None:intergenic | 45.0% | |
| ATGGTATGGTTCTCTCAGGA+TGG | + | chr8_2:22791319-22791338 | Msa1240340:CDS | 45.0% | |
| ! | CGAATACTGCTGATGACGAA+AGG | + | chr8_2:22791505-22791524 | Msa1240340:CDS | 45.0% |
| AATTCCCATCGAGCATGACA+AGG | - | chr8_2:22791569-22791588 | None:intergenic | 45.0% | |
| GTAGAGGTTTGGCGATTCTT+TGG | + | chr8_2:22791676-22791695 | Msa1240340:three_prime_UTR | 45.0% | |
| TAGTAGCAGCATACCTAACC+CGG | - | chr8_2:22791708-22791727 | None:intergenic | 45.0% | |
| GATTAGTGATCCTCTCTGTC+AGG | - | chr8_2:22791811-22791830 | None:intergenic | 45.0% | |
| !! | ATGGTTGGTGCTGGTGGAAT+TGG | + | chr8_2:22785567-22785586 | Msa1240340:CDS | 50.0% |
| GGACATCGAACCAAGACCTT+TGG | + | chr8_2:22786382-22786401 | Msa1240340:intron | 50.0% | |
| !!! | GTTCAACCGTGGTTTTGTCC+AGG | - | chr8_2:22786439-22786458 | None:intergenic | 50.0% |
| ! | TAATAGTGACCGGAGGGTGT+AGG | + | chr8_2:22786679-22786698 | Msa1240340:intron | 50.0% |
| ACCTTATCACCTACACCCTC+CGG | - | chr8_2:22786691-22786710 | None:intergenic | 50.0% | |
| GGGTGTAGGTGATAAGGTGT+AGG | + | chr8_2:22786693-22786712 | Msa1240340:intron | 50.0% | |
| GATGCAGATCTGGTGAATGC+TGG | + | chr8_2:22786733-22786752 | Msa1240340:intron | 50.0% | |
| GTGAATGCTGGTGGAAGTTG+TGG | + | chr8_2:22786745-22786764 | Msa1240340:intron | 50.0% | |
| AAACAGCATCCCTAGCAACC+TGG | - | chr8_2:22787061-22787080 | None:intergenic | 50.0% | |
| AGTGGAACTACTGGGTTCCT+TGG | + | chr8_2:22787254-22787273 | Msa1240340:CDS | 50.0% | |
| AACTACTGGGTTCCTTGGTC+AGG | + | chr8_2:22787259-22787278 | Msa1240340:CDS | 50.0% | |
| CAAAGTAACTCCCATGCCCA+TGG | - | chr8_2:22790311-22790330 | None:intergenic | 50.0% | |
| AGCGAGATAAGTTAGAGCCG+TGG | - | chr8_2:22790340-22790359 | None:intergenic | 50.0% | |
| TTAGGCTCAAATGGCTCCAC+TGG | - | chr8_2:22790671-22790690 | None:intergenic | 50.0% | |
| GAGCTTCCTTCTCCTGTAAC+TGG | + | chr8_2:22791065-22791084 | Msa1240340:CDS | 50.0% | |
| CTTCCTTCTCCTGTAACTGG+TGG | + | chr8_2:22791068-22791087 | Msa1240340:CDS | 50.0% | |
| GTACCACCAGTTACAGGAGA+AGG | - | chr8_2:22791074-22791093 | None:intergenic | 50.0% | |
| CCTGAGAGAACCATACCATC+GGG | - | chr8_2:22791318-22791337 | None:intergenic | 50.0% | |
| ! | TCATTTTCTGCAGCTGCAGC+TGG | - | chr8_2:22791351-22791370 | None:intergenic | 50.0% |
| TGCTGTTATTGGTGCGTCTG+AGG | - | chr8_2:22791403-22791422 | None:intergenic | 50.0% | |
| ACGACCTTGTCATGCTCGAT+GGG | + | chr8_2:22791562-22791581 | Msa1240340:CDS | 50.0% | |
| GGCGATTCTTTGGCCATAAC+CGG | + | chr8_2:22791686-22791705 | Msa1240340:three_prime_UTR | 50.0% | |
| GCGATTCTTTGGCCATAACC+GGG | + | chr8_2:22791687-22791706 | Msa1240340:three_prime_UTR | 50.0% | |
| TCTTTGGCCATAACCGGGTT+AGG | + | chr8_2:22791692-22791711 | Msa1240340:three_prime_UTR | 50.0% | |
| CAGCATACCTAACCCGGTTA+TGG | - | chr8_2:22791702-22791721 | None:intergenic | 50.0% | |
| !! | GTTCTCATGGTTGGTGCTGG+TGG | + | chr8_2:22785561-22785580 | Msa1240340:CDS | 55.0% |
| AACCAAACCGTAGACGGTGC+TGG | + | chr8_2:22786468-22786487 | Msa1240340:intron | 55.0% | |
| AACCAGCACCGTCTACGGTT+TGG | - | chr8_2:22786473-22786492 | None:intergenic | 55.0% | |
| ! | ACCGGAGGGTGTAGGTGATA+AGG | + | chr8_2:22786687-22786706 | Msa1240340:intron | 55.0% |
| CTTGTGGGGAGATGCAGATC+TGG | + | chr8_2:22786723-22786742 | Msa1240340:intron | 55.0% | |
| GCAGATCTGGTGAATGCTGG+TGG | + | chr8_2:22786736-22786755 | Msa1240340:intron | 55.0% | |
| ATCCCATGTTGGGCAGTCCA+AGG | + | chr8_2:22786955-22786974 | Msa1240340:CDS | 55.0% | |
| AGCCTTGGACTGCCCAACAT+GGG | - | chr8_2:22786960-22786979 | None:intergenic | 55.0% | |
| ! | TAGCCTTGGACTGCCCAACA+TGG | - | chr8_2:22786961-22786980 | None:intergenic | 55.0% |
| GGCTGGACAACCTAGATGCA+CGG | + | chr8_2:22787183-22787202 | Msa1240340:CDS | 55.0% | |
| TCACATGTCGCCGTGCATCT+AGG | - | chr8_2:22787196-22787215 | None:intergenic | 55.0% | |
| !!! | ACCTCCTAGTTTTGTGGCCC+CGG | + | chr8_2:22788157-22788176 | Msa1240340:intron | 55.0% |
| CAGGAGAAGGAAGCTCAGCT+AGG | - | chr8_2:22791061-22791080 | None:intergenic | 55.0% | |
| CCCGATGGTATGGTTCTCTC+AGG | + | chr8_2:22791315-22791334 | Msa1240340:CDS | 55.0% | |
| GACGACCTTGTCATGCTCGA+TGG | + | chr8_2:22791561-22791580 | Msa1240340:CDS | 55.0% | |
| !! | CTTGCTGACTCCTGACAGAG+AGG | + | chr8_2:22791798-22791817 | Msa1240340:three_prime_UTR | 55.0% |
| !!! | TCCTAGTTTTGTGGCCCCGG+CGG | + | chr8_2:22788160-22788179 | Msa1240340:intron | 60.0% |
| CCGCGAACCAGCACCGTCTA+CGG | - | chr8_2:22786478-22786497 | None:intergenic | 65.0% | |
| !! | CCGTAGACGGTGCTGGTTCG+CGG | + | chr8_2:22786475-22786494 | Msa1240340:intron | 65.0% |
| GCCGGGGCCACAAAACTAGG+AGG | - | chr8_2:22788161-22788180 | None:intergenic | 65.0% | |
| ACCGCCGGGGCCACAAAACT+AGG | - | chr8_2:22788164-22788183 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 22785365 | 22791962 | 22785365 | ID=Msa1240340;Name=Msa1240340 |
| chr8_2 | mRNA | 22785365 | 22791962 | 22785365 | ID=Msa1240340-mRNA-1;Parent=Msa1240340;Name=Msa1240340-mRNA-1;_AED=0.12;_eAED=0.12;_QI=83|1|1|1|1|1|11|342|635 |
| chr8_2 | exon | 22785365 | 22785468 | 22785365 | ID=Msa1240340-mRNA-1:exon:8159;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22785552 | 22785641 | 22785552 | ID=Msa1240340-mRNA-1:exon:8160;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22786899 | 22786982 | 22786899 | ID=Msa1240340-mRNA-1:exon:8161;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22787062 | 22787280 | 22787062 | ID=Msa1240340-mRNA-1:exon:8162;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22788321 | 22788422 | 22788321 | ID=Msa1240340-mRNA-1:exon:8163;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22788787 | 22789245 | 22788787 | ID=Msa1240340-mRNA-1:exon:8164;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22789354 | 22789583 | 22789354 | ID=Msa1240340-mRNA-1:exon:8165;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22790622 | 22790715 | 22790622 | ID=Msa1240340-mRNA-1:exon:8166;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22790806 | 22790985 | 22790806 | ID=Msa1240340-mRNA-1:exon:8167;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22791056 | 22791153 | 22791056 | ID=Msa1240340-mRNA-1:exon:8168;Parent=Msa1240340-mRNA-1 |
| chr8_2 | exon | 22791290 | 22791962 | 22791290 | ID=Msa1240340-mRNA-1:exon:8169;Parent=Msa1240340-mRNA-1 |
| chr8_2 | five_prime_UTR | 22785365 | 22785447 | 22785365 | ID=Msa1240340-mRNA-1:five_prime_utr;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22785448 | 22785468 | 22785448 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22785552 | 22785641 | 22785552 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22786899 | 22786982 | 22786899 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22787062 | 22787280 | 22787062 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22788321 | 22788422 | 22788321 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22788787 | 22789245 | 22788787 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22789354 | 22789583 | 22789354 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22790622 | 22790715 | 22790622 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22790806 | 22790985 | 22790806 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22791056 | 22791153 | 22791056 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | CDS | 22791290 | 22791620 | 22791290 | ID=Msa1240340-mRNA-1:cds;Parent=Msa1240340-mRNA-1 |
| chr8_2 | three_prime_UTR | 22791621 | 22791962 | 22791621 | ID=Msa1240340-mRNA-1:three_prime_utr;Parent=Msa1240340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
