AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0658480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0658480 MtrunA17_Chr8g0381521 96.610 531 15 2 1 530 1 529 0.0 1007
Msa0658480 MtrunA17_Chr4g0037531 35.775 355 157 13 5 313 8 337 5.24e-31 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0658480 AT3G26400.1 54.417 566 188 16 1 530 1 532 5.58e-150 440
Msa0658480 AT1G13020.1 56.437 567 192 16 1 530 1 549 1.72e-137 409
Msa0658480 AT4G38710.2 42.025 326 130 15 28 312 36 343 6.35e-29 120
Msa0658480 AT4G38710.1 42.331 326 129 15 28 312 36 343 6.76e-29 119

Find 256 sgRNAs with CRISPR-Local

Find 623 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCCTTCTGGTAATTCTT+TGG 0.156604 4_3:-68564015 Msa0658480:three_prime_UTR
GAGCCTCTGGTGATGGTTCT+TGG 0.179415 4_3:-68570347 Msa0658480:CDS
CTGGTAATTCTTTGGGTGTC+TGG 0.211551 4_3:-68564007 Msa0658480:three_prime_UTR
CCGCTTCCTGTTAGATCTTA+TGG 0.218066 4_3:-68570072 Msa0658480:CDS
AGCCTCTGGTGATGGTTCTT+GGG 0.247824 4_3:-68570346 Msa0658480:CDS
TCCCCTTCTGGTAATTCTTT+GGG 0.248571 4_3:-68564014 Msa0658480:three_prime_UTR
TATGGTGGTTCTCGTGATTC+TGG 0.249533 4_3:-68570054 Msa0658480:CDS
AGGCAGATGGAGTGGATAAT+TGG 0.253571 4_3:-68570110 Msa0658480:CDS
TTGAGCCGGGGCTCCGTTAA+TGG 0.262941 4_3:+68570803 None:intergenic
CAAAACTTAATTGAAGATTA+TGG 0.270334 4_3:-68563952 Msa0658480:three_prime_UTR
TTGGATGATAAAGTTCGTTT+TGG 0.275669 4_3:-68564699 Msa0658480:CDS
ATGATTGTTGCTCCAATTCC+TGG 0.276606 4_3:+68564103 None:intergenic
GCAGCGTCCTAGGTTGGTTT+TGG 0.292176 4_3:-68569944 Msa0658480:CDS
GTTCAATTTACTCCAGGAAT+TGG 0.296707 4_3:-68564115 Msa0658480:three_prime_UTR
GGGCTGACGAGGTGGATAAT+TGG 0.300105 4_3:-68570242 Msa0658480:CDS
TCTCCAAAAGGATTCACTTT+TGG 0.308158 4_3:+68569679 None:intergenic
AGGCCAAAAGTGAATCCTTT+TGG 0.324714 4_3:-68569682 Msa0658480:CDS
GGAACTACTTATCCGTGATT+TGG 0.344370 4_3:-68564718 Msa0658480:CDS
CGGAGCTTGGGCGGCTGATT+CGG 0.344734 4_3:-68570682 Msa0658480:CDS
CGAATAGCAGAGATTTGAAT+AGG 0.354477 4_3:-68564470 Msa0658480:intron
TCGCTCCCGTCGTTTGATTC+CGG 0.356824 4_3:-68570204 Msa0658480:CDS
AGCGCCAAGTTCTAGGGTTT+CGG 0.360129 4_3:-68570280 Msa0658480:CDS
GACATCTTCTTATTCTTCTT+CGG 0.360505 4_3:+68570564 None:intergenic
AAAATTGAAGAGAATGAGAT+TGG 0.361009 4_3:+68570743 None:intergenic
CGCTTCGCGTTCTTCGGCTT+CGG 0.362008 4_3:+68570653 None:intergenic
GATTTGAGCAGATGCAAAAC+AGG 0.366946 4_3:+68563881 None:intergenic
TTGAGATGCAATAACAGATT+AGG 0.368876 4_3:+68564056 None:intergenic
GGTGGTAGTGGTGGTGGTGG+TGG 0.370793 4_3:-68570153 Msa0658480:CDS
TACAAGTAATAAATAGTATT+AGG 0.371235 4_3:+68564153 None:intergenic
TGGAGCATCGCGCCGTTGAT+AGG 0.377186 4_3:-68569591 Msa0658480:intron
TCGAAACCCTGGGGCAATAT+CGG 0.378455 4_3:-68570702 Msa0658480:CDS
CTTCTTATTCTTCTTCGGTT+TGG 0.379482 4_3:+68570569 None:intergenic
TGGTGTTCACCATCTCTCTT+TGG 0.380963 4_3:+68564221 None:intergenic
CTTCTTCGGTTTGGTAGTTA+CGG 0.381729 4_3:+68570578 None:intergenic
GGCTGACGAGGTGGATAATT+GGG 0.383328 4_3:-68570241 Msa0658480:CDS
AACGTAGAGCGCCAAGTTCT+AGG 0.393943 4_3:-68570287 Msa0658480:CDS
TGGTAATTCTTTGGGTGTCT+GGG 0.396695 4_3:-68564006 Msa0658480:three_prime_UTR
AGCTGCCGCTTCGCGTTCTT+CGG 0.399874 4_3:+68570647 None:intergenic
ATCTCGGTCTGGCTCATTTG+AGG 0.400037 4_3:-68564610 Msa0658480:CDS
CATTTGGTGCAGCGAGGCCT+AGG 0.404433 4_3:-68569858 Msa0658480:CDS
CGGAGCTCCGGCTCCATTAA+CGG 0.409603 4_3:-68570816 Msa0658480:five_prime_UTR
GCGGAAGATGGATCTTGAAT+TGG 0.411399 4_3:-68569611 Msa0658480:CDS
AAGCAAAACCTCCCTGGGTT+TGG 0.412864 4_3:+68569654 None:intergenic
GGCGGTGGTTTCTCTTCCTA+TGG 0.414541 4_3:-68570402 Msa0658480:CDS
GCGGTGGTGGTGGTCGTGGA+AGG 0.415953 4_3:-68570380 Msa0658480:CDS
ACGAATAAGCCGAATCCATT+TGG 0.416658 4_3:-68569874 Msa0658480:CDS
GAGGAAGTGTTGGCGGAGAA+AGG 0.421760 4_3:-68569835 Msa0658480:CDS
GAACCTCTGGCCCACCGATC+TGG 0.424689 4_3:+68570024 None:intergenic
GGTGATGGTTCTTGGGGCGC+TGG 0.428963 4_3:-68570339 Msa0658480:CDS
CCAAGCTCCGATATTGCCCC+AGG 0.429446 4_3:+68570695 None:intergenic
GGCTTATTCGTCTTCACCAC+CGG 0.431540 4_3:+68569886 None:intergenic
CTAGGCCTCGCTGCACCAAA+TGG 0.435351 4_3:+68569859 None:intergenic
GAACCACCATAAGATCTAAC+AGG 0.437526 4_3:+68570066 None:intergenic
CTCGCTAAGCAAAACCTCCC+TGG 0.437584 4_3:+68569648 None:intergenic
AATCAGAATCAGAATCGATA+TGG 0.439413 4_3:-68570174 Msa0658480:CDS
CTCGCTGCACCAAATGGATT+CGG 0.440455 4_3:+68569865 None:intergenic
GGCGCTGGAAGAAGATCTTA+TGG 0.445499 4_3:-68570324 Msa0658480:CDS
AGGATATGATTGGAAGAAGC+TGG 0.446369 4_3:-68569815 Msa0658480:CDS
TTGAGCACTTGAAGGCCTGC+TGG 0.447154 4_3:+68569744 None:intergenic
TTTGCATGTTCTCGGAGCTC+CGG 0.449709 4_3:-68570828 Msa0658480:five_prime_UTR
ATCTTGACCCTCGGAGCGAT+TGG 0.449872 4_3:+68569720 None:intergenic
CGATATGGTGGTAGTGGTGG+TGG 0.449924 4_3:-68570159 Msa0658480:CDS
TGGTTCCACAGCAGAACCTC+TGG 0.451855 4_3:+68570011 None:intergenic
TTCTCTTCCTATGGCGGTGG+TGG 0.452323 4_3:-68570393 Msa0658480:CDS
TTCTTTGGGTGTCTGGGTGA+AGG 0.456170 4_3:-68564000 Msa0658480:three_prime_UTR
GAAAGGCCTGGTTCGTCAGC+AGG 0.456280 4_3:-68564663 Msa0658480:CDS
ACAGAACCATCACCTTTCCT+TGG 0.459101 4_3:+68569919 None:intergenic
GATGACAGAAGACAATTTCA+AGG 0.460874 4_3:-68564516 Msa0658480:CDS
CGATTGGATTGAGCACTTGA+AGG 0.461514 4_3:+68569736 None:intergenic
CTGGGGCAATATCGGAGCTT+GGG 0.462695 4_3:-68570694 Msa0658480:CDS
GCATTGCACGTGTACCAGTT+TGG 0.464629 4_3:+68564763 None:intergenic
TCTTCCTATGGCGGTGGTGG+TGG 0.465249 4_3:-68570390 Msa0658480:CDS
GATAAAGAAGGGAAGGGGAG+AGG 0.465933 4_3:+68570852 None:intergenic
TGGCGGAGAAAGGATATGAT+TGG 0.466422 4_3:-68569825 Msa0658480:CDS
CCTGGGGCAATATCGGAGCT+TGG 0.467551 4_3:-68570695 Msa0658480:CDS
TGGTAAGGATTGGCGGAAGA+TGG 0.467995 4_3:-68569623 Msa0658480:CDS
CAGTTTAACCGTCTTGGCGG+TGG 0.470233 4_3:-68570417 Msa0658480:CDS
TATGGCGGTGGTGGTGGTCG+TGG 0.471152 4_3:-68570384 Msa0658480:CDS
GGCAGATGGAGTGGATAATT+GGG 0.471534 4_3:-68570109 Msa0658480:CDS
GAAAATGTGGTTGTTGAGCC+GGG 0.472266 4_3:+68570790 None:intergenic
GCTCCTCTAGCCCACCGATC+TGG 0.472872 4_3:+68569991 None:intergenic
TTTCGGAATTTGAACCGTCC+AGG 0.476666 4_3:-68570263 Msa0658480:CDS
CTGGGTTTGGCATCTCCAAA+AGG 0.479404 4_3:+68569667 None:intergenic
CAATGCTACTAGAGAAAGAA+AGG 0.479482 4_3:-68564746 Msa0658480:CDS
ACGGTTTCTTTCCCTGCATG+TGG 0.481615 4_3:+68570956 None:intergenic
GTCTTTCCTGCTGACGAACC+AGG 0.482824 4_3:+68564657 None:intergenic
AGGGATCGTGAGGGAGCCTC+TGG 0.485594 4_3:-68570360 Msa0658480:CDS
AGCAGCAACAGCAGCGTCCT+AGG 0.485970 4_3:-68569954 Msa0658480:CDS
TCCTCAGCAGAACGTTCCTT+AGG 0.488461 4_3:+68570444 None:intergenic
GTAGTTTCTTTCCCACATGC+AGG 0.491422 4_3:-68570968 Msa0658480:five_prime_UTR
TGAAAATGTGGTTGTTGAGC+CGG 0.492140 4_3:+68570789 None:intergenic
GTGTTGTTGTGTTGAAAATG+TGG 0.492848 4_3:+68570777 None:intergenic
TCCGCCAACACTTCCTCCCT+AGG 0.493899 4_3:+68569841 None:intergenic
ACGTAGAGCGCCAAGTTCTA+GGG 0.497869 4_3:-68570286 Msa0658480:CDS
CTCGAAAATGTCGAAACCCT+GGG 0.499446 4_3:-68570712 Msa0658480:exon
ATTATCCACCTCGTCAGCCC+TGG 0.500158 4_3:+68570245 None:intergenic
ATTTCAAGGTAGCAAGGATA+GGG 0.500167 4_3:-68564502 Msa0658480:CDS
AATTTCAAGGTAGCAAGGAT+AGG 0.501060 4_3:-68564503 Msa0658480:CDS
GAACATGCAAAAGATAAAGA+AGG 0.502109 4_3:+68570840 None:intergenic
CAGAATCGATATGGTGGTAG+TGG 0.502726 4_3:-68570165 Msa0658480:CDS
CTGCTGGAATGTGAACTTGT+AGG 0.505442 4_3:+68569760 None:intergenic
TTAGCGAGCGTGGTAAGGAT+TGG 0.506880 4_3:-68569633 Msa0658480:CDS
TCGTCTTCCTACCGGTCCTA+AGG 0.507007 4_3:-68570460 Msa0658480:CDS
CGGTGGTGGTGGTCGTGGAA+GGG 0.507473 4_3:-68570379 Msa0658480:CDS
TATGGTGGTAGTGGTGGTGG+TGG 0.507632 4_3:-68570156 Msa0658480:CDS
AAGATGGTGCGCTGAAACCG+AGG 0.507806 4_3:-68569702 Msa0658480:CDS
CGTGAGGGAGCCTCTGGTGA+TGG 0.508685 4_3:-68570354 Msa0658480:CDS
CAGAAAGCTGTTGAAAGGCC+TGG 0.509843 4_3:-68564675 Msa0658480:CDS
AATTCCGAAACCCTAGAACT+TGG 0.511211 4_3:+68570276 None:intergenic
TGCTGTGGAACCAGATCGGT+GGG 0.512724 4_3:-68570001 Msa0658480:CDS
CGACATATCACCTGTGCCAC+GGG 0.515058 4_3:+68564551 None:intergenic
GCAACAGCAGCGTCCTAGGT+TGG 0.516875 4_3:-68569950 Msa0658480:CDS
TAGAGGAGCGCCGCGTGATA+CGG 0.516900 4_3:-68569977 Msa0658480:CDS
GGGAGAGGTTAGAATGCGAA+AGG 0.517605 4_3:+68570867 None:intergenic
GCCTCTGGTGATGGTTCTTG+GGG 0.518261 4_3:-68570345 Msa0658480:CDS
TTCGGAATTTGAACCGTCCA+GGG 0.519440 4_3:-68570262 Msa0658480:CDS
GGAGTGGATAATTGGGCGGT+TGG 0.520476 4_3:-68570102 Msa0658480:CDS
CAGCGCACCATCTTGACCCT+CGG 0.521094 4_3:+68569711 None:intergenic
AATTGTCTTCTGTCATCAGT+AGG 0.523447 4_3:+68564522 None:intergenic
CGGGGCTCCGTTAATGGAGC+CGG 0.524102 4_3:+68570809 None:intergenic
TTTGCTTAGCGAGCGTGGTA+AGG 0.524114 4_3:-68569638 Msa0658480:CDS
CTGATTCTGATTCTGACGAC+CGG 0.524196 4_3:+68570185 None:intergenic
GATAGGCCACCATCTCGGTC+TGG 0.525689 4_3:-68564621 Msa0658480:CDS
GCCTAGGGAGGAAGTGTTGG+CGG 0.526765 4_3:-68569842 Msa0658480:CDS
GAAATGCAGTTTAACCGTCT+TGG 0.527709 4_3:-68570423 Msa0658480:CDS
GTTACGGCTTCCTTGAGACT+AGG 0.528834 4_3:+68570594 None:intergenic
GGTTTCTCTTCCTATGGCGG+TGG 0.531483 4_3:-68570396 Msa0658480:CDS
GAGGAATCTGCGGATGGTGC+TGG 0.532039 4_3:-68564792 Msa0658480:CDS
TCGTCAGCAGGAAAGACTGC+TGG 0.532956 4_3:-68564651 Msa0658480:CDS
GGAGGTTACTCCTCCGGTGG+TGG 0.533255 4_3:-68570522 Msa0658480:CDS
TTGGGCAGAAAGCTGTTGAA+AGG 0.534800 4_3:-68564680 Msa0658480:CDS
GATATCAGCGGCGCCACCAC+CGG 0.535066 4_3:+68570509 None:intergenic
CGACCTCGATCCCGTGGCAC+AGG 0.538214 4_3:-68564561 Msa0658480:CDS
ATTTGAGGATTCAAGAAGTG+TGG 0.538801 4_3:-68564595 Msa0658480:CDS
GAGATGCTTCGTCTTCCTAC+CGG 0.539084 4_3:-68570468 Msa0658480:CDS
AGCAGAACGTTCCTTAGGAC+CGG 0.539689 4_3:+68570449 None:intergenic
CTTGGATCCAAAACCAACCT+AGG 0.540620 4_3:+68569937 None:intergenic
ATGCAGTTTAACCGTCTTGG+CGG 0.540678 4_3:-68570420 Msa0658480:CDS
TTTGAAGAAGCAACTTGAGA+AGG 0.542051 4_3:-68564835 Msa0658480:CDS
GAGGCCTAGGGAGGAAGTGT+TGG 0.542683 4_3:-68569845 Msa0658480:CDS
TCGATTGGTCACGCGCGGCA+CGG 0.547361 4_3:+68570937 None:intergenic
TAATAAATAGTATTAGGCTC+TGG 0.547578 4_3:+68564159 None:intergenic
TCGCTAAGCAAAACCTCCCT+GGG 0.548787 4_3:+68569649 None:intergenic
TGCAAAAGATAAAGAAGGGA+AGG 0.548918 4_3:+68570845 None:intergenic
TCTCGAAAATGTCGAAACCC+TGG 0.549880 4_3:-68570713 Msa0658480:exon
TAATTGAAGATTATGGAACT+TGG 0.550353 4_3:-68563945 Msa0658480:three_prime_UTR
ACGACCACCACCACCGCCAT+AGG 0.553964 4_3:+68570386 None:intergenic
GAAGCTGGATTCTGAGATTG+AGG 0.554898 4_3:-68569800 Msa0658480:CDS
CGGTTTCTTTCCCTGCATGT+GGG 0.557024 4_3:+68570957 None:intergenic
ACTAGAGAAAGAAAGGGAGC+TGG 0.557129 4_3:-68564739 Msa0658480:CDS
CTGCTGTGGAACCAGATCGG+TGG 0.557733 4_3:-68570002 Msa0658480:CDS
TTACGGCTTCCTTGAGACTA+GGG 0.558909 4_3:+68570595 None:intergenic
GAGCAACAATCATTGAGTAC+TGG 0.559760 4_3:-68564093 Msa0658480:three_prime_UTR
CTACAAGTTCACATTCCAGC+AGG 0.560772 4_3:-68569759 Msa0658480:CDS
ACACGTGGAGGTTACTCCTC+CGG 0.561472 4_3:-68570528 Msa0658480:CDS
AGATTAAAGAGAGGATCGAT+TGG 0.564829 4_3:+68570922 None:intergenic
TGGTTCTGTCAATGAATCTC+CGG 0.565055 4_3:-68569905 Msa0658480:CDS
GCGAGCGTGGTAAGGATTGG+CGG 0.565425 4_3:-68569630 Msa0658480:CDS
TTGGATCCAAGGAAAGGTGA+TGG 0.566233 4_3:-68569925 Msa0658480:CDS
TGGTCGTGGAAGGGATCGTG+AGG 0.567376 4_3:-68570370 Msa0658480:CDS
CGAAGCCGAAGAACGCGAAG+CGG 0.568032 4_3:-68570652 Msa0658480:CDS
GGAAGACGAAGCATCTCCTC+CGG 0.571095 4_3:+68570474 None:intergenic
TCCTCATTTGAATTAACTGT+AGG 0.572168 4_3:+68564810 None:intergenic
GGAGAGGTTAGAATGCGAAA+GGG 0.574330 4_3:+68570868 None:intergenic
GCCTACAGTTAATTCAAATG+AGG 0.574899 4_3:-68564811 Msa0658480:CDS
TAGTTTCTTTCCCACATGCA+GGG 0.575068 4_3:-68570967 Msa0658480:five_prime_UTR
AACATGCAAAAGATAAAGAA+GGG 0.575926 4_3:+68570841 None:intergenic
GCTCAATCCAATCGCTCCGA+GGG 0.577405 4_3:-68569727 Msa0658480:CDS
AGCTTGGGCGGCTGATTCGG+AGG 0.578951 4_3:-68570679 Msa0658480:CDS
TGAATCTAAGGCAGATGGAG+TGG 0.579010 4_3:-68570118 Msa0658480:CDS
GACGACCGGAATCAAACGAC+GGG 0.580045 4_3:+68570199 None:intergenic
CCATAAGATCTAACAGGAAG+CGG 0.580778 4_3:+68570072 None:intergenic
TGAACCGTCCAGGGCTGACG+AGG 0.581118 4_3:-68570253 Msa0658480:CDS
ATCTCCTCCGGTGTCAAACG+AGG 0.582913 4_3:+68570486 None:intergenic
AATCGCTCCGAGGGTCAAGA+TGG 0.583358 4_3:-68569718 Msa0658480:CDS
CGGCTCCATTAACGGAGCCC+CGG 0.583647 4_3:-68570808 Msa0658480:five_prime_UTR
TTCGCGTTCTTCGGCTTCGG+CGG 0.584811 4_3:+68570656 None:intergenic
ACCCAAAGAATTACCAGAAG+GGG 0.586030 4_3:+68564013 None:intergenic
ATTTGGTGCAGCGAGGCCTA+GGG 0.586725 4_3:-68569857 Msa0658480:CDS
TCCACCTCGTCAGCCCTGGA+CGG 0.589159 4_3:+68570249 None:intergenic
TTTCTGATAGGCCACCATCT+CGG 0.589671 4_3:-68564626 Msa0658480:CDS
AAAAGAATGAGATTAAAGAG+AGG 0.591664 4_3:+68570913 None:intergenic
GGTGCTGGTGGAGACCAAAC+TGG 0.594085 4_3:-68564777 Msa0658480:CDS
TGGAATGGAACCAGATCGGT+GGG 0.595246 4_3:-68570034 Msa0658480:CDS
AAGACAATTTCAAGGTAGCA+AGG 0.599199 4_3:-68564508 Msa0658480:CDS
GAACTTTATCATCCAAATCA+CGG 0.600280 4_3:+68564706 None:intergenic
ACCGTCCAGGGCTGACGAGG+TGG 0.601252 4_3:-68570250 Msa0658480:CDS
CTGTGCCACGGGATCGAGGT+CGG 0.601837 4_3:+68564562 None:intergenic
GCAAAAGATAAAGAAGGGAA+GGG 0.602416 4_3:+68570846 None:intergenic
GAACCAGATCGGTGGGCCAG+AGG 0.608417 4_3:-68570027 Msa0658480:CDS
GAACCAGATCGGTGGGCTAG+AGG 0.608627 4_3:-68569994 Msa0658480:CDS
AATGCGAAAGGGAATGCGAA+TGG 0.608798 4_3:+68570879 None:intergenic
ATTGTCTTCTGTCATCAGTA+GGG 0.609039 4_3:+68564523 None:intergenic
GGGCAATATCGGAGCTTGGG+CGG 0.612360 4_3:-68570691 Msa0658480:CDS
TCAAATGAGCCAGACCGAGA+TGG 0.613829 4_3:+68564612 None:intergenic
CTGGAATGGAACCAGATCGG+TGG 0.613892 4_3:-68570035 Msa0658480:CDS
GAATCTGCGGATGGTGCTGG+TGG 0.614461 4_3:-68564789 Msa0658480:CDS
CACCCAAAGAATTACCAGAA+GGG 0.616792 4_3:+68564012 None:intergenic
CAAAAGATAAAGAAGGGAAG+GGG 0.616891 4_3:+68570847 None:intergenic
TGGTTCTCGTGATTCTGGAA+TGG 0.620802 4_3:-68570049 Msa0658480:CDS
TCGACATATCACCTGTGCCA+CGG 0.621711 4_3:+68564550 None:intergenic
CTCTCTGAATTCACACGTGG+AGG 0.621888 4_3:-68570540 Msa0658480:CDS
CAAGCTCCGATATTGCCCCA+GGG 0.622182 4_3:+68570696 None:intergenic
TGGTGCAGCGAGGCCTAGGG+AGG 0.622918 4_3:-68569854 Msa0658480:CDS
GATCAGAATTAACCTATCAA+CGG 0.623107 4_3:+68569579 None:intergenic
GGTGGTGAATCTAAGGCAGA+TGG 0.624412 4_3:-68570123 Msa0658480:CDS
CTTCCTGTTAGATCTTATGG+TGG 0.624740 4_3:-68570069 Msa0658480:CDS
ATTTGAGCAGATGCAAAACA+GGG 0.625534 4_3:+68563882 None:intergenic
GGTGGTTTCTCTTCCTATGG+CGG 0.626377 4_3:-68570399 Msa0658480:CDS
ACGGACCGACCTCGATCCCG+TGG 0.627001 4_3:-68564567 Msa0658480:CDS
GGTCAAGTTCCAAAGAGAGA+TGG 0.627584 4_3:-68564230 Msa0658480:CDS
AAGAGAAACCACCGCCAAGA+CGG 0.628351 4_3:+68570409 None:intergenic
CGAGGTGGATAATTGGGCGT+CGG 0.628407 4_3:-68570235 Msa0658480:CDS
TCCTAAGGAACGTTCTGCTG+AGG 0.630026 4_3:-68570445 Msa0658480:CDS
TTTCAAGGTAGCAAGGATAG+GGG 0.630195 4_3:-68564501 Msa0658480:CDS
GTTCTGCTGTGGAACCAGAT+CGG 0.630379 4_3:-68570005 Msa0658480:CDS
TTCAAGGTAGCAAGGATAGG+GGG 0.630758 4_3:-68564500 Msa0658480:CDS
AATCGATATGGTGGTAGTGG+TGG 0.632759 4_3:-68570162 Msa0658480:CDS
AATGAGCCAGACCGAGATGG+TGG 0.632763 4_3:+68564615 None:intergenic
GGTCGTGGAAGGGATCGTGA+GGG 0.633323 4_3:-68570369 Msa0658480:CDS
TCACCTGTGCCACGGGATCG+AGG 0.634702 4_3:+68564558 None:intergenic
GTGGGCCAGAGGTTCTGCTG+TGG 0.635102 4_3:-68570016 Msa0658480:CDS
ATCAGCGGCGCCACCACCGG+AGG 0.637808 4_3:+68570512 None:intergenic
CAGAATCAGAATCGATATGG+TGG 0.641276 4_3:-68570171 Msa0658480:CDS
AATGCTACTAGAGAAAGAAA+GGG 0.643049 4_3:-68564745 Msa0658480:CDS
GCCCCAAGAACCATCACCAG+AGG 0.646418 4_3:+68570344 None:intergenic
TGCTCAATCCAATCGCTCCG+AGG 0.647671 4_3:-68569728 Msa0658480:CDS
AGACAACTTCCCTAGTCTCA+AGG 0.647880 4_3:-68570604 Msa0658480:CDS
TGATATCCCTCGTTTGACAC+CGG 0.647894 4_3:-68570493 Msa0658480:CDS
AGGGAAGTTGTCTGACGGAG+CGG 0.647971 4_3:+68570614 None:intergenic
GAACGTTCCTTAGGACCGGT+AGG 0.649208 4_3:+68570453 None:intergenic
CGTGGAGGTTACTCCTCCGG+TGG 0.650334 4_3:-68570525 Msa0658480:CDS
TCAAATGAGGAATCTGCGGA+TGG 0.652201 4_3:-68564798 Msa0658480:CDS
ACACCCAAAGAATTACCAGA+AGG 0.654355 4_3:+68564011 None:intergenic
AGACTAGGGAAGTTGTCTGA+CGG 0.654960 4_3:+68570609 None:intergenic
GAGGATCGATTGGTCACGCG+CGG 0.656205 4_3:+68570932 None:intergenic
AAAATGTGGTTGTTGAGCCG+GGG 0.656326 4_3:+68570791 None:intergenic
ATTCTGGAATGGAACCAGAT+CGG 0.658547 4_3:-68570038 Msa0658480:CDS
TATCCCTCGTTTGACACCGG+AGG 0.661145 4_3:-68570490 Msa0658480:CDS
TAATTCAAATGAGGAATCTG+CGG 0.665307 4_3:-68564802 Msa0658480:CDS
TCTCCTCCGGTGTCAAACGA+GGG 0.667734 4_3:+68570487 None:intergenic
TGGAGATGCCAAACCCAGGG+AGG 0.669816 4_3:-68569662 Msa0658480:CDS
CGAAGCGGCAGCTAAGTCAG+CGG 0.671050 4_3:-68570637 Msa0658480:CDS
GAAAGGGAATGCGAATGGAG+AGG 0.674800 4_3:+68570884 None:intergenic
CGAATCCATTTGGTGCAGCG+AGG 0.679245 4_3:-68569864 Msa0658480:CDS
TCGCTCTCTGAATTCACACG+TGG 0.684890 4_3:-68570543 Msa0658480:CDS
TTGAGCAGATGCAAAACAGG+GGG 0.686216 4_3:+68563884 None:intergenic
TCGAAAATGTCGAAACCCTG+GGG 0.688784 4_3:-68570711 Msa0658480:exon
AGATGGAGTGGATAATTGGG+CGG 0.692662 4_3:-68570106 Msa0658480:CDS
TTCTGTCAATGAATCTCCGG+TGG 0.699329 4_3:-68569902 Msa0658480:CDS
TGACGACCGGAATCAAACGA+CGG 0.701239 4_3:+68570198 None:intergenic
TGTTGCTGCTCCGTATCACG+CGG 0.719824 4_3:+68569967 None:intergenic
TTTGAGCAGATGCAAAACAG+GGG 0.727028 4_3:+68563883 None:intergenic
TTTCAGGCCTGAGACCATGG+AGG 0.728930 4_3:-68564886 Msa0658480:intron
GCTGGAAGAAGATCTTATGG+TGG 0.751047 4_3:-68570321 Msa0658480:CDS
TGTCAAACGAGGGATATCAG+CGG 0.753007 4_3:+68570497 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCAATAATAATTATATTA+TGG - chr4_3:68567236-68567255 Msa0658480:intron 10.0%
!! TGTTCAAAAAAATTATATTA+TGG - chr4_3:68567266-68567285 Msa0658480:intron 10.0%
!! AAAAATAAATAAATAAACAG+AGG + chr4_3:68569315-68569334 None:intergenic 10.0%
!!! TAATTTCTAGTATAATAAAT+AGG - chr4_3:68569609-68569628 Msa0658480:CDS 10.0%
!! TTAAATAACGAAAAATTAAA+AGG + chr4_3:68569694-68569713 None:intergenic 10.0%
!!! AATTGATTTCTATAATTAAG+AGG - chr4_3:68565675-68565694 Msa0658480:intron 15.0%
!! TAGATAATTTAGTTATAGAT+AGG - chr4_3:68566574-68566593 Msa0658480:intron 15.0%
!! AGATAATTTAGTTATAGATA+GGG - chr4_3:68566575-68566594 Msa0658480:intron 15.0%
!!! TATATTATTGATTTGTTTGA+AGG - chr4_3:68566743-68566762 Msa0658480:intron 15.0%
!!! CAGTCATTTTTTTTTTTTTT+GGG - chr4_3:68566851-68566870 Msa0658480:intron 15.0%
!!! AGTCATTTTTTTTTTTTTTG+GGG - chr4_3:68566852-68566871 Msa0658480:intron 15.0%
!! CACCATAATATAATTATTAT+TGG + chr4_3:68567241-68567260 None:intergenic 15.0%
!!! ATTGATGTTTTAAAAAAAGT+TGG - chr4_3:68567428-68567447 Msa0658480:intron 15.0%
!!! TTTGTTAAGTCTTAATATTT+TGG - chr4_3:68568071-68568090 Msa0658480:intron 15.0%
!!! TTGTTTATATTCATTTTACT+TGG - chr4_3:68569852-68569871 Msa0658480:CDS 15.0%
!! TACAAGTAATAAATAGTATT+AGG + chr4_3:68570720-68570739 None:intergenic 15.0%
!!! AACTATTTAAGTTCCTTTTA+TGG - chr4_3:68565358-68565377 Msa0658480:intron 20.0%
!! GAAAAAGACTACAAAATAAT+TGG + chr4_3:68565905-68565924 None:intergenic 20.0%
!!! ATACATAATACTTTTAAGAG+TGG - chr4_3:68566105-68566124 Msa0658480:intron 20.0%
!!! GTATTGATAATTAACAAACT+AGG + chr4_3:68566158-68566177 None:intergenic 20.0%
!!! ATGCTTTTTTAATCAAAACT+TGG - chr4_3:68566209-68566228 Msa0658480:intron 20.0%
!!! ATTGTAACCATTCTAAAATA+GGG + chr4_3:68566339-68566358 None:intergenic 20.0%
!! ATATATAATTCACTGTTGAA+CGG - chr4_3:68566367-68566386 Msa0658480:intron 20.0%
!! ACGTTTATATTATTAACTCT+TGG + chr4_3:68566417-68566436 None:intergenic 20.0%
!! AGTTTGATCTATGATTTAAA+TGG + chr4_3:68566446-68566465 None:intergenic 20.0%
!! TGATTTCAATAATTAATCCA+TGG + chr4_3:68566493-68566512 None:intergenic 20.0%
!! TCAAATGTGAAGATAAAAAA+AGG - chr4_3:68566510-68566529 Msa0658480:intron 20.0%
!! ATCATTGCAATTTATAAATC+TGG - chr4_3:68566686-68566705 Msa0658480:intron 20.0%
!!! GCAGTCATTTTTTTTTTTTT+TGG - chr4_3:68566850-68566869 Msa0658480:intron 20.0%
!!! GTCATTTTTTTTTTTTTTGG+GGG - chr4_3:68566853-68566872 Msa0658480:intron 20.0%
!!! GAAACTATTTATTGTTATTG+TGG - chr4_3:68567297-68567316 Msa0658480:intron 20.0%
!!! TAGAAATAAAGTCTTATAGT+AGG - chr4_3:68567333-68567352 Msa0658480:intron 20.0%
!!! TAAAACATCAATCCTTTTAT+GGG + chr4_3:68567420-68567439 None:intergenic 20.0%
!!! TTAAAACATCAATCCTTTTA+TGG + chr4_3:68567421-68567440 None:intergenic 20.0%
!! TTGACATGAACAAAAAAATT+TGG - chr4_3:68567972-68567991 Msa0658480:intron 20.0%
!!! GTTGTTAAGTCTTAATATTT+TGG - chr4_3:68567994-68568013 Msa0658480:intron 20.0%
!! TTGACATGAACAAAAAAATT+TGG - chr4_3:68567972-68567991 Msa0658480:intron 20.0%
!! TATATTCCTACCAAATAATT+AGG + chr4_3:68568130-68568149 None:intergenic 20.0%
!! ATACAAGTAATCTGAAAAAA+AGG + chr4_3:68568222-68568241 None:intergenic 20.0%
!!! AATTATCATGCACTATATTT+TGG - chr4_3:68568586-68568605 Msa0658480:intron 20.0%
!!! ATTATCATGCACTATATTTT+GGG - chr4_3:68568587-68568606 Msa0658480:intron 20.0%
!! TGAACTTTGATTATTAGTTA+TGG - chr4_3:68569393-68569412 Msa0658480:intron 20.0%
!!! ATAATTTGGGTTAATCAATT+AGG - chr4_3:68569894-68569913 Msa0658480:CDS 20.0%
!!! TTTTAATAATTTTTCCTCCA+TGG + chr4_3:68570001-68570020 None:intergenic 20.0%
!!! TTTTGTCCTAATAAAATTAC+AGG + chr4_3:68570903-68570922 None:intergenic 20.0%
!! CAAAACTTAATTGAAGATTA+TGG - chr4_3:68570918-68570937 Msa0658480:five_prime_UTR 20.0%
! AAAAGAATGAGATTAAAGAG+AGG + chr4_3:68563960-68563979 None:intergenic 25.0%
! AACATGCAAAAGATAAAGAA+GGG + chr4_3:68564032-68564051 None:intergenic 25.0%
! AAAATTGAAGAGAATGAGAT+TGG + chr4_3:68564130-68564149 None:intergenic 25.0%
! TTAATTGAACACACCATAAA+AGG + chr4_3:68565374-68565393 None:intergenic 25.0%
! TGTTCAATTAATTAGAGTCA+TGG - chr4_3:68565383-68565402 Msa0658480:intron 25.0%
! GTTCAATTAATTAGAGTCAT+GGG - chr4_3:68565384-68565403 Msa0658480:intron 25.0%
! TAATGTCTTAACTTTATAGC+AGG - chr4_3:68565466-68565485 Msa0658480:intron 25.0%
! TATTAAACACTAGTTGGATA+TGG - chr4_3:68565714-68565733 Msa0658480:intron 25.0%
! TCATTAAGTGTTATGTATGT+TGG - chr4_3:68565824-68565843 Msa0658480:intron 25.0%
!!! TTTCAGTTATTTTGGAGATT+AGG - chr4_3:68565866-68565885 Msa0658480:intron 25.0%
!! GTAATTTGTCATAGGAATAT+AGG - chr4_3:68566032-68566051 Msa0658480:intron 25.0%
!!! CATTGTAACCATTCTAAAAT+AGG + chr4_3:68566340-68566359 None:intergenic 25.0%
!! TTTAGAATGGTTACAATGAA+AGG - chr4_3:68566342-68566361 Msa0658480:intron 25.0%
! TTAGAATGGTTACAATGAAA+GGG - chr4_3:68566343-68566362 Msa0658480:intron 25.0%
! AATGTGAAGATAAAAAAAGG+TGG - chr4_3:68566513-68566532 Msa0658480:intron 25.0%
! TTTGTTTGAAGGTAATTTCA+TGG - chr4_3:68566754-68566773 Msa0658480:intron 25.0%
! AAAATGGTTGTAACTTCAAA+AGG - chr4_3:68566954-68566973 Msa0658480:intron 25.0%
! AAATGGTTGTAACTTCAAAA+GGG - chr4_3:68566955-68566974 Msa0658480:intron 25.0%
!!! TTTTTGAGCATGAAAATATG+AGG - chr4_3:68567173-68567192 Msa0658480:intron 25.0%
! TCTTATAGTAGGATTATAGA+TGG - chr4_3:68567344-68567363 Msa0658480:intron 25.0%
! ATAAACATGCACTAAGATAT+TGG + chr4_3:68567576-68567595 None:intergenic 25.0%
! AGTTAGAATTCCAATTCTAA+TGG - chr4_3:68567705-68567724 Msa0658480:intron 25.0%
! ATTCCAATTCTAATGGAATT+CGG - chr4_3:68567712-68567731 Msa0658480:intron 25.0%
! TTCAGAAAATGAAAATCAAC+AGG + chr4_3:68567948-68567967 None:intergenic 25.0%
!!! AGTCTTAATATTTTGGACTT+TGG - chr4_3:68568001-68568020 Msa0658480:intron 25.0%
! TTTGTTCATGTCAATTCTTT+CGG + chr4_3:68567966-68567985 None:intergenic 25.0%
!!! AGTCTTAATATTTTGGACTT+TGG - chr4_3:68568001-68568020 Msa0658480:intron 25.0%
! TTGTACCAAATTAGTTATGT+CGG - chr4_3:68568166-68568185 Msa0658480:intron 25.0%
! ATAAGCATAAATCTATAGTC+TGG + chr4_3:68568346-68568365 None:intergenic 25.0%
! GACTATAGATTTATGCTTAT+TGG - chr4_3:68568346-68568365 Msa0658480:intron 25.0%
!! AATATTACAGGCTTCTAAAA+AGG + chr4_3:68568382-68568401 None:intergenic 25.0%
! TCATAAGCAGATTTAAAAAG+AGG + chr4_3:68568747-68568766 None:intergenic 25.0%
!!! ATTCAGTTTTGACTTTGTTT+TGG - chr4_3:68568789-68568808 Msa0658480:intron 25.0%
!!! ATTTTGGTACAGATCTATTT+GGG - chr4_3:68568952-68568971 Msa0658480:intron 25.0%
!! TTTGGGATTAGAAATAAGTT+TGG - chr4_3:68568969-68568988 Msa0658480:intron 25.0%
! AGAAAATTCAAAGGTTTCTA+GGG - chr4_3:68569013-68569032 Msa0658480:intron 25.0%
! TTAAATACTTTGGTTGAGTT+GGG - chr4_3:68569072-68569091 Msa0658480:intron 25.0%
!! TAAACTAATTTGCGTCATAT+TGG - chr4_3:68569351-68569370 Msa0658480:intron 25.0%
!! AAACTAATTTGCGTCATATT+GGG - chr4_3:68569352-68569371 Msa0658480:intron 25.0%
!! TGTTATAGCTTAATTTTGCA+GGG - chr4_3:68569529-68569548 Msa0658480:intron 25.0%
! AGGGAAATACTACATTATTA+GGG - chr4_3:68569548-68569567 Msa0658480:intron 25.0%
!!! GTTTTAGTGTTAATTGCTTT+GGG - chr4_3:68569570-68569589 Msa0658480:intron 25.0%
! TAATAAATAGTATTAGGCTC+TGG + chr4_3:68570714-68570733 None:intergenic 25.0%
!! AGAAAGCCTGTAATTTTATT+AGG - chr4_3:68570894-68570913 Msa0658480:five_prime_UTR 25.0%
! TAATTGAAGATTATGGAACT+TGG - chr4_3:68570925-68570944 Msa0658480:five_prime_UTR 25.0%
GAACATGCAAAAGATAAAGA+AGG + chr4_3:68564033-68564052 None:intergenic 30.0%
! CTTTATCTTTTGCATGTTCT+CGG - chr4_3:68564034-68564053 Msa0658480:three_prime_UTR 30.0%
GACATCTTCTTATTCTTCTT+CGG + chr4_3:68564309-68564328 None:intergenic 30.0%
AATCAGAATCAGAATCGATA+TGG - chr4_3:68564696-68564715 Msa0658480:CDS 30.0%
GATCAGAATTAACCTATCAA+CGG + chr4_3:68565294-68565313 None:intergenic 30.0%
AATAGTATAGGTGAATCAGA+TGG - chr4_3:68565413-68565432 Msa0658480:intron 30.0%
ATAGTATAGGTGAATCAGAT+GGG - chr4_3:68565414-68565433 Msa0658480:intron 30.0%
! ATGAGTTTGAGTATCGTTAT+CGG - chr4_3:68565497-68565516 Msa0658480:intron 30.0%
TGATGGTTTCTTATTCTATC+AGG - chr4_3:68565520-68565539 Msa0658480:intron 30.0%
GATGGTTTCTTATTCTATCA+GGG - chr4_3:68565521-68565540 Msa0658480:intron 30.0%
ATAGTGGTTAGCAAAACATA+AGG - chr4_3:68565639-68565658 Msa0658480:intron 30.0%
GTGTTTAATAGCTCAATAAC+TGG + chr4_3:68565704-68565723 None:intergenic 30.0%
TTGAGCTATTAAACACTAGT+TGG - chr4_3:68565708-68565727 Msa0658480:intron 30.0%
AGTGTTATGTATGTTGGATA+TGG - chr4_3:68565830-68565849 Msa0658480:intron 30.0%
!!! AGTTATTTTGGAGATTAGGT+TGG - chr4_3:68565870-68565889 Msa0658480:intron 30.0%
!! GTAGTCTTTTTCACTTCATA+TGG - chr4_3:68565913-68565932 Msa0658480:intron 30.0%
ATAGGAATATAGGATAGTTG+TGG - chr4_3:68566042-68566061 Msa0658480:intron 30.0%
AATTAACAAACTAGGTCACA+AGG + chr4_3:68566150-68566169 None:intergenic 30.0%
AAAAAAAGGTGGATAAGTTG+TGG - chr4_3:68566524-68566543 Msa0658480:intron 30.0%
GATTTCTTTCATCAACTGAA+TGG - chr4_3:68567042-68567061 Msa0658480:intron 30.0%
! TCTACTAGTTTAGAGCAAAA+AGG + chr4_3:68567104-68567123 None:intergenic 30.0%
ACTAGTAGAACAACTTTGTA+AGG - chr4_3:68567115-68567134 Msa0658480:intron 30.0%
!!! TACCTACTTTTTGTATGTAG+TGG - chr4_3:68567145-68567164 Msa0658480:intron 30.0%
ATCCACTACATACAAAAAGT+AGG + chr4_3:68567150-68567169 None:intergenic 30.0%
!!! ATTTTCATTTCAAGTTCAGC+AGG - chr4_3:68567199-68567218 Msa0658480:intron 30.0%
!!! TTTTCATTTCAAGTTCAGCA+GGG - chr4_3:68567200-68567219 Msa0658480:intron 30.0%
TTGAATTTAGCAGAAACAGA+GGG + chr4_3:68567614-68567633 None:intergenic 30.0%
TTCCTCTTAGAGAATATGTT+AGG - chr4_3:68567638-68567657 Msa0658480:intron 30.0%
TACCTAACATATTCTCTAAG+AGG + chr4_3:68567643-68567662 None:intergenic 30.0%
AATATGTTAGGTAAGCCAAA+TGG - chr4_3:68567650-68567669 Msa0658480:intron 30.0%
GGTTGACAATGATTTATCTT+TGG - chr4_3:68567786-68567805 Msa0658480:intron 30.0%
ACAATGATTTATCTTTGGTC+TGG - chr4_3:68567791-68567810 Msa0658480:intron 30.0%
! CATTTTTATCTTGTCAGTCA+GGG - chr4_3:68567888-68567907 Msa0658480:intron 30.0%
TGACGATTGAAATAGTTGAT+AGG - chr4_3:68567917-68567936 Msa0658480:intron 30.0%
! GACGATTGAAATAGTTGATA+GGG - chr4_3:68567918-68567937 Msa0658480:intron 30.0%
CAAATAATTAGGACAAGTAC+TGG + chr4_3:68568119-68568138 None:intergenic 30.0%
CAGTACTTGTCCTAATTATT+TGG - chr4_3:68568117-68568136 Msa0658480:intron 30.0%
ACTTGTCCTAATTATTTGGT+AGG - chr4_3:68568121-68568140 Msa0658480:intron 30.0%
AGTATCCGACATAACTAATT+TGG + chr4_3:68568174-68568193 None:intergenic 30.0%
ATGTTGGAATCATAGGATAA+GGG + chr4_3:68568273-68568292 None:intergenic 30.0%
GTCACAACAAACAATATTAC+AGG + chr4_3:68568394-68568413 None:intergenic 30.0%
!! TAATATTGTTTGTTGTGACC+TGG - chr4_3:68568395-68568414 Msa0658480:intron 30.0%
!! AATATTGTTTGTTGTGACCT+GGG - chr4_3:68568396-68568415 Msa0658480:intron 30.0%
!! TGAAGATTGCAATCTAGTTT+TGG - chr4_3:68568491-68568510 Msa0658480:intron 30.0%
TCAATATGTTTGGCTGTATT+TGG - chr4_3:68568653-68568672 Msa0658480:intron 30.0%
AAGCAGATTTAAAAAGAGGT+TGG + chr4_3:68568743-68568762 None:intergenic 30.0%
AAGTCAAAACTGAATAGAGA+AGG + chr4_3:68568784-68568803 None:intergenic 30.0%
ATCATCAATCTCAAATCCTT+TGG + chr4_3:68568934-68568953 None:intergenic 30.0%
!! GGATTTGAGATTGATGATTT+TGG - chr4_3:68568936-68568955 Msa0658480:intron 30.0%
!! GATTTTGGTACAGATCTATT+TGG - chr4_3:68568951-68568970 Msa0658480:intron 30.0%
! AACCTTTGAATTTTCTCCTT+TGG + chr4_3:68569009-68569028 None:intergenic 30.0%
GAGAAAATTCAAAGGTTTCT+AGG - chr4_3:68569012-68569031 Msa0658480:intron 30.0%
!!! GGGTGTATGTTTTGATATTT+AGG - chr4_3:68569033-68569052 Msa0658480:intron 30.0%
! ACTAGTAGCCTTAAATACTT+TGG - chr4_3:68569062-68569081 Msa0658480:intron 30.0%
! CAACTCAACCAAAGTATTTA+AGG + chr4_3:68569073-68569092 None:intergenic 30.0%
CTTAAATACTTTGGTTGAGT+TGG - chr4_3:68569071-68569090 Msa0658480:intron 30.0%
! CTTTTATGTGTATGATAGCA+TGG - chr4_3:68569451-68569470 Msa0658480:intron 30.0%
CAAAATTAAGCTATAACAGG+TGG + chr4_3:68569527-68569546 None:intergenic 30.0%
CTGCAAAATTAAGCTATAAC+AGG + chr4_3:68569530-68569549 None:intergenic 30.0%
! CTGTTATAGCTTAATTTTGC+AGG - chr4_3:68569528-68569547 Msa0658480:intron 30.0%
CAGGGAAATACTACATTATT+AGG - chr4_3:68569547-68569566 Msa0658480:intron 30.0%
!! GGTTTTAGTGTTAATTGCTT+TGG - chr4_3:68569569-68569588 Msa0658480:intron 30.0%
ATCATTTACTCCCAATAGTT+TGG - chr4_3:68569790-68569809 Msa0658480:CDS 30.0%
GATCACATTTATATAGCAAG+AGG + chr4_3:68569826-68569845 None:intergenic 30.0%
! CTTGCTATATAAATGTGATC+TGG - chr4_3:68569826-68569845 Msa0658480:CDS 30.0%
ACAACATTGCAGCATAATTT+GGG - chr4_3:68569881-68569900 Msa0658480:CDS 30.0%
AAGTAACTTCAAAGTCAACA+AGG + chr4_3:68569965-68569984 None:intergenic 30.0%
!!! TGACTTTGAAGTTACTTTTC+AGG - chr4_3:68569968-68569987 Msa0658480:CDS 30.0%
TCCTCATTTGAATTAACTGT+AGG + chr4_3:68570063-68570082 None:intergenic 30.0%
TAATTCAAATGAGGAATCTG+CGG - chr4_3:68570068-68570087 Msa0658480:CDS 30.0%
AATGCTACTAGAGAAAGAAA+GGG - chr4_3:68570125-68570144 Msa0658480:CDS 30.0%
GAACTTTATCATCCAAATCA+CGG + chr4_3:68570167-68570186 None:intergenic 30.0%
! TTGGATGATAAAGTTCGTTT+TGG - chr4_3:68570171-68570190 Msa0658480:CDS 30.0%
! TGGATGATAAAGTTCGTTTT+GGG - chr4_3:68570172-68570191 Msa0658480:CDS 30.0%
!! TTCAAGAAGTGTGGATTTTA+CGG - chr4_3:68570284-68570303 Msa0658480:CDS 30.0%
AGCATTAACAAACAGTTATC+GGG + chr4_3:68570602-68570621 None:intergenic 30.0%
CAGCATTAACAAACAGTTAT+CGG + chr4_3:68570603-68570622 None:intergenic 30.0%
ACTCTTAATCCACAAAAAAC+TGG + chr4_3:68570672-68570691 None:intergenic 30.0%
TTGAGATGCAATAACAGATT+AGG + chr4_3:68570817-68570836 None:intergenic 30.0%
!! TAAATTTGATTTTCCCCTTC+TGG - chr4_3:68570844-68570863 Msa0658480:five_prime_UTR 30.0%
AGATTAAAGAGAGGATCGAT+TGG + chr4_3:68563951-68563970 None:intergenic 35.0%
CAAAAGATAAAGAAGGGAAG+GGG + chr4_3:68564026-68564045 None:intergenic 35.0%
GCAAAAGATAAAGAAGGGAA+GGG + chr4_3:68564027-68564046 None:intergenic 35.0%
TGCAAAAGATAAAGAAGGGA+AGG + chr4_3:68564028-68564047 None:intergenic 35.0%
! GTGTTGTTGTGTTGAAAATG+TGG + chr4_3:68564096-68564115 None:intergenic 35.0%
CTTCTTATTCTTCTTCGGTT+TGG + chr4_3:68564304-68564323 None:intergenic 35.0%
! TCTCCAAAAGGATTCACTTT+TGG + chr4_3:68565194-68565213 None:intergenic 35.0%
!! CATGGGAGCATTAATAGTAT+AGG - chr4_3:68565401-68565420 Msa0658480:intron 35.0%
TGTGTATCTGAGAGCTAATT+GGG - chr4_3:68565608-68565627 Msa0658480:intron 35.0%
ACTAGTTGGATATGGAAATC+AGG - chr4_3:68565722-68565741 Msa0658480:intron 35.0%
!!! AGGCGCTTTTTCAGTTATTT+TGG - chr4_3:68565858-68565877 Msa0658480:intron 35.0%
! ATGGTTTTCTGTGTAATGCT+TGG - chr4_3:68565932-68565951 Msa0658480:intron 35.0%
! ACCTCGGCTTTGTAAATTTA+GGG + chr4_3:68566011-68566030 None:intergenic 35.0%
! AACCTCGGCTTTGTAAATTT+AGG + chr4_3:68566012-68566031 None:intergenic 35.0%
CCTATGACAAATTACAACCT+CGG + chr4_3:68566027-68566046 None:intergenic 35.0%
GAGATTCGAGAGAATACAAA+TGG - chr4_3:68566266-68566285 Msa0658480:intron 35.0%
ATTAATCAGCATAGCGTACA+TGG - chr4_3:68566305-68566324 Msa0658480:intron 35.0%
!! AACAGCTCCCTATTTTAGAA+TGG - chr4_3:68566329-68566348 Msa0658480:intron 35.0%
TCATAGATCAAACTCCAAGA+AGG - chr4_3:68566452-68566471 Msa0658480:intron 35.0%
!! CAGATATGTTTGAGTTGAAG+AGG - chr4_3:68566614-68566633 Msa0658480:intron 35.0%
TAATTTCATGGCATTCACGA+TGG - chr4_3:68566766-68566785 Msa0658480:intron 35.0%
CCTAGTCGTATAACATACTT+GGG + chr4_3:68566801-68566820 None:intergenic 35.0%
CCAAGTATGTTATACGACTA+GGG - chr4_3:68566799-68566818 Msa0658480:intron 35.0%
CAAGTATGTTATACGACTAG+GGG - chr4_3:68566800-68566819 Msa0658480:intron 35.0%
! AGTCAAAGAAGCATGTGAAA+TGG - chr4_3:68567076-68567095 Msa0658480:intron 35.0%
!! TTTCATTTCAAGTTCAGCAG+GGG - chr4_3:68567201-68567220 Msa0658480:intron 35.0%
AGTGTTATCATGCCCATAAA+AGG - chr4_3:68567405-68567424 Msa0658480:intron 35.0%
TTGTATTTGTATGATGCCTG+AGG - chr4_3:68567477-68567496 Msa0658480:intron 35.0%
TGTATTTGTATGATGCCTGA+GGG - chr4_3:68567478-68567497 Msa0658480:intron 35.0%
ACCCATACTCATGTTATTGT+TGG - chr4_3:68567528-68567547 Msa0658480:intron 35.0%
CCCAACAATAACATGAGTAT+GGG + chr4_3:68567532-68567551 None:intergenic 35.0%
CCCATACTCATGTTATTGTT+GGG - chr4_3:68567529-68567548 Msa0658480:intron 35.0%
ACCCAACAATAACATGAGTA+TGG + chr4_3:68567533-68567552 None:intergenic 35.0%
CTTGAATTTAGCAGAAACAG+AGG + chr4_3:68567615-68567634 None:intergenic 35.0%
!! CTCTGTTTCTGCTAAATTCA+AGG - chr4_3:68567613-68567632 Msa0658480:intron 35.0%
CTAACAGAACACATTCCATT+TGG + chr4_3:68567668-68567687 None:intergenic 35.0%
CTTCCGAATTCCATTAGAAT+TGG + chr4_3:68567718-68567737 None:intergenic 35.0%
TAATGGAATTCGGAAGACAT+AGG - chr4_3:68567722-68567741 Msa0658480:intron 35.0%
GACATAGGCCATAAAAAGAT+CGG - chr4_3:68567737-68567756 Msa0658480:intron 35.0%
ATCATTGTAGCTGATGATCA+AGG + chr4_3:68567854-68567873 None:intergenic 35.0%
! GCATTTTTATCTTGTCAGTC+AGG - chr4_3:68567887-68567906 Msa0658480:intron 35.0%
TTGGTAGGAATATATGTCGT+AGG - chr4_3:68568136-68568155 Msa0658480:intron 35.0%
TCATAGGATAAGGGTTACAA+AGG + chr4_3:68568264-68568283 None:intergenic 35.0%
GATGTTGGAATCATAGGATA+AGG + chr4_3:68568274-68568293 None:intergenic 35.0%
TATCTCGATGTTGGAATCAT+AGG + chr4_3:68568280-68568299 None:intergenic 35.0%
AAAACAATAGATCCTGCTGA+AGG + chr4_3:68568316-68568335 None:intergenic 35.0%
! GCTTCTAAAAAGGAAAGGAA+AGG + chr4_3:68568372-68568391 None:intergenic 35.0%
! TACAGGCTTCTAAAAAGGAA+AGG + chr4_3:68568377-68568396 None:intergenic 35.0%
!! ATATTGTTTGTTGTGACCTG+GGG - chr4_3:68568397-68568416 Msa0658480:intron 35.0%
AATCTTCAAGAACAATCCCA+GGG + chr4_3:68568479-68568498 None:intergenic 35.0%
GGAATTATGTTTCAGCCTTA+AGG - chr4_3:68568608-68568627 Msa0658480:intron 35.0%
AACTGAATAGAGAAGGTGAA+AGG + chr4_3:68568777-68568796 None:intergenic 35.0%
!!! TTGACTTTGTTTTGGTTCTG+TGG - chr4_3:68568797-68568816 Msa0658480:intron 35.0%
!!! AAGCTTTTGCTTGACTTGTT+TGG - chr4_3:68568825-68568844 Msa0658480:intron 35.0%
! AAAGCATCAAATAGCATCTC+AGG + chr4_3:68568857-68568876 None:intergenic 35.0%
!!! TTGCTATTTTTAGCTGCCAA+AGG - chr4_3:68568915-68568934 Msa0658480:intron 35.0%
GGGATTAGAAATAAGTTTGG+AGG - chr4_3:68568972-68568991 Msa0658480:intron 35.0%
AGAAATAAGTTTGGAGGTCA+AGG - chr4_3:68568978-68568997 Msa0658480:intron 35.0%
GAAATAAGTTTGGAGGTCAA+GGG - chr4_3:68568979-68568998 Msa0658480:intron 35.0%
AAATAAGTTTGGAGGTCAAG+GGG - chr4_3:68568980-68568999 Msa0658480:intron 35.0%
CTCCAAAGGAGAAAATTCAA+AGG - chr4_3:68569004-68569023 Msa0658480:intron 35.0%
GGTTATTTGTAATCCCTAGA+GGG - chr4_3:68569093-68569112 Msa0658480:intron 35.0%
! CAAAGTAATTGGCCTCTATT+TGG + chr4_3:68569127-68569146 None:intergenic 35.0%
GCTATGGAGTACAAAGTAAT+TGG + chr4_3:68569138-68569157 None:intergenic 35.0%
TGTTATAGTTGCGTACTTGA+AGG - chr4_3:68569161-68569180 Msa0658480:intron 35.0%
ACTCAAAAACGGAACACAAT+GGG + chr4_3:68569209-68569228 None:intergenic 35.0%
TACTCAAAAACGGAACACAA+TGG + chr4_3:68569210-68569229 None:intergenic 35.0%
! AGGAAGTGAAACTAAGTTGA+GGG + chr4_3:68569295-68569314 None:intergenic 35.0%
GTCATATTGGGATTGCATAT+TGG - chr4_3:68569364-68569383 Msa0658480:intron 35.0%
CTATTAGCAATCTACCTGTT+GGG + chr4_3:68569727-68569746 None:intergenic 35.0%
ACTATTAGCAATCTACCTGT+TGG + chr4_3:68569728-68569747 None:intergenic 35.0%
TTGACCAAAGCCAAACTATT+GGG + chr4_3:68569803-68569822 None:intergenic 35.0%
CACAACATTGCAGCATAATT+TGG - chr4_3:68569880-68569899 Msa0658480:CDS 35.0%
TTTGAAGAAGCAACTTGAGA+AGG - chr4_3:68570035-68570054 Msa0658480:CDS 35.0%
GCCTACAGTTAATTCAAATG+AGG - chr4_3:68570059-68570078 Msa0658480:CDS 35.0%
CAATGCTACTAGAGAAAGAA+AGG - chr4_3:68570124-68570143 Msa0658480:CDS 35.0%
ATTTGAGGATTCAAGAAGTG+TGG - chr4_3:68570275-68570294 Msa0658480:CDS 35.0%
ATTGTCTTCTGTCATCAGTA+GGG + chr4_3:68570350-68570369 None:intergenic 35.0%
AATTGTCTTCTGTCATCAGT+AGG + chr4_3:68570351-68570370 None:intergenic 35.0%
GATGACAGAAGACAATTTCA+AGG - chr4_3:68570354-68570373 Msa0658480:CDS 35.0%
AAGACAATTTCAAGGTAGCA+AGG - chr4_3:68570362-68570381 Msa0658480:CDS 35.0%
AATTTCAAGGTAGCAAGGAT+AGG - chr4_3:68570367-68570386 Msa0658480:CDS 35.0%
ATTTCAAGGTAGCAAGGATA+GGG - chr4_3:68570368-68570387 Msa0658480:CDS 35.0%
CGAATAGCAGAGATTTGAAT+AGG - chr4_3:68570400-68570419 Msa0658480:CDS 35.0%
!! TATTCTTGACTTGCCACTTA+TGG - chr4_3:68570461-68570480 Msa0658480:CDS 35.0%
! ATGGTAAACTCTGCCTATTT+TGG - chr4_3:68570480-68570499 Msa0658480:CDS 35.0%
CAACAGATCAAAGCCAAAAT+AGG + chr4_3:68570496-68570515 None:intergenic 35.0%
! AACATAGCCCCTTTTCATTT+TGG - chr4_3:68570576-68570595 Msa0658480:CDS 35.0%
TTATCGGGCCAAAATGAAAA+GGG + chr4_3:68570587-68570606 None:intergenic 35.0%
!! CGTTTTGTTCAATTTACTCC+AGG - chr4_3:68570749-68570768 Msa0658480:five_prime_UTR 35.0%
GTTCAATTTACTCCAGGAAT+TGG - chr4_3:68570755-68570774 Msa0658480:five_prime_UTR 35.0%
TAGTTTCTTTCCCACATGCA+GGG - chr4_3:68563903-68563922 Msa0658480:three_prime_UTR 40.0%
TGAAAATGTGGTTGTTGAGC+CGG + chr4_3:68564084-68564103 None:intergenic 40.0%
!! CTTCTTCGGTTTGGTAGTTA+CGG + chr4_3:68564295-68564314 None:intergenic 40.0%
GAAATGCAGTTTAACCGTCT+TGG - chr4_3:68564447-68564466 Msa0658480:intron 40.0%
AATTCCGAAACCCTAGAACT+TGG + chr4_3:68564597-68564616 None:intergenic 40.0%
CAGAATCAGAATCGATATGG+TGG - chr4_3:68564699-68564718 Msa0658480:CDS 40.0%
!!! TTTTGGTGGTGGTGAATCTA+AGG - chr4_3:68564740-68564759 Msa0658480:CDS 40.0%
CCATAAGATCTAACAGGAAG+CGG + chr4_3:68564801-68564820 None:intergenic 40.0%
CTTCCTGTTAGATCTTATGG+TGG - chr4_3:68564801-68564820 Msa0658480:CDS 40.0%
GAACCACCATAAGATCTAAC+AGG + chr4_3:68564807-68564826 None:intergenic 40.0%
!! ATTCTGGAATGGAACCAGAT+CGG - chr4_3:68564832-68564851 Msa0658480:CDS 40.0%
!!! TTGGTTTTGGATCCAAGGAA+AGG - chr4_3:68564939-68564958 Msa0658480:intron 40.0%
! TGGTTCTGTCAATGAATCTC+CGG - chr4_3:68564965-68564984 Msa0658480:intron 40.0%
ACGAATAAGCCGAATCCATT+TGG - chr4_3:68564996-68565015 Msa0658480:intron 40.0%
AGGATATGATTGGAAGAAGC+TGG - chr4_3:68565055-68565074 Msa0658480:intron 40.0%
!! AAAGGATTCACTTTTGGCCT+CGG + chr4_3:68565188-68565207 None:intergenic 40.0%
! AGGCCAAAAGTGAATCCTTT+TGG - chr4_3:68565188-68565207 Msa0658480:intron 40.0%
! TTGAGTATCGTTATCGGTGA+TGG - chr4_3:68565503-68565522 Msa0658480:intron 40.0%
! ATTAGCTCTCAGATACACAC+AGG + chr4_3:68565607-68565626 None:intergenic 40.0%
GTGTGTATCTGAGAGCTAAT+TGG - chr4_3:68565607-68565626 Msa0658480:intron 40.0%
GTGTATCTGAGAGCTAATTG+GGG - chr4_3:68565609-68565628 Msa0658480:intron 40.0%
TAATTGGGGATGTGACATAG+TGG - chr4_3:68565623-68565642 Msa0658480:intron 40.0%
GTATGTTGGATATGGAAGTC+AGG - chr4_3:68565838-68565857 Msa0658480:intron 40.0%
CTGTGTAATGCTTGGTAGAT+AGG - chr4_3:68565940-68565959 Msa0658480:intron 40.0%
GTAATGCTTGGTAGATAGGT+TGG - chr4_3:68565944-68565963 Msa0658480:intron 40.0%
ACCCTAAATTTACAAAGCCG+AGG - chr4_3:68566007-68566026 Msa0658480:intron 40.0%
! CCGAGGTTGTAATTTGTCAT+AGG - chr4_3:68566024-68566043 Msa0658480:intron 40.0%
TGGCACTTTAGTACAAGCAA+AGG - chr4_3:68566062-68566081 Msa0658480:intron 40.0%
GGCACTTTAGTACAAGCAAA+GGG - chr4_3:68566063-68566082 Msa0658480:intron 40.0%
! TTACCTCTTTCTAGCCTTCT+TGG + chr4_3:68566469-68566488 None:intergenic 40.0%
!! ATGTTTGAGTTGAAGAGGCA+AGG - chr4_3:68566619-68566638 Msa0658480:intron 40.0%
!! TGTTTGAGTTGAAGAGGCAA+GGG - chr4_3:68566620-68566639 Msa0658480:intron 40.0%
CCCAAGTATGTTATACGACT+AGG - chr4_3:68566798-68566817 Msa0658480:intron 40.0%
CCCTAGTCGTATAACATACT+TGG + chr4_3:68566802-68566821 None:intergenic 40.0%
! TTATACGACTAGGGGTTTTG+TGG - chr4_3:68566808-68566827 Msa0658480:intron 40.0%
!! TATACGACTAGGGGTTTTGT+GGG - chr4_3:68566809-68566828 Msa0658480:intron 40.0%
! ATTTTGTGTGCCCTAAGGTT+CGG + chr4_3:68566939-68566958 None:intergenic 40.0%
TTCAGCAGGGGTGATAAAAA+GGG - chr4_3:68567213-68567232 Msa0658480:intron 40.0%
TAGTACACGAGCAATCTTCT+AGG + chr4_3:68567381-68567400 None:intergenic 40.0%
GTATTTGTATGATGCCTGAG+GGG - chr4_3:68567479-68567498 Msa0658480:intron 40.0%
TATTTGTATGATGCCTGAGG+GGG - chr4_3:68567480-68567499 Msa0658480:intron 40.0%
GCAGAAACAGAGGGAATAAA+AGG + chr4_3:68567605-68567624 None:intergenic 40.0%
TAGGCCATAAAAAGATCGGT+AGG - chr4_3:68567741-68567760 Msa0658480:intron 40.0%
AGGCCATAAAAAGATCGGTA+GGG - chr4_3:68567742-68567761 Msa0658480:intron 40.0%
GAGACTTATGCTATTCTGCT+TGG - chr4_3:68567765-68567784 Msa0658480:intron 40.0%
AGGGTTACAAAGGAAAAGAG+AGG + chr4_3:68568254-68568273 None:intergenic 40.0%
CAATCTTCAAGAACAATCCC+AGG + chr4_3:68568480-68568499 None:intergenic 40.0%
!!! ATTGCAATCTAGTTTTGGCC+AGG - chr4_3:68568496-68568515 Msa0658480:intron 40.0%
!!! TAGTTTTGGCCAGGAAGTAT+GGG - chr4_3:68568505-68568524 Msa0658480:intron 40.0%
!! CCAGTTGAGTTGAAACCTTA+AGG + chr4_3:68568626-68568645 None:intergenic 40.0%
CCTTAAGGTTTCAACTCAAC+TGG - chr4_3:68568623-68568642 Msa0658480:intron 40.0%
TGGCCTGAGTTCAATATGTT+TGG - chr4_3:68568643-68568662 Msa0658480:intron 40.0%
CAGCCAAACATATTGAACTC+AGG + chr4_3:68568649-68568668 None:intergenic 40.0%
TGTTTGGCTGTATTTGGAAG+TGG - chr4_3:68568659-68568678 Msa0658480:intron 40.0%
TGTATTTGGAAGTGGAGTCT+GGG - chr4_3:68568667-68568686 Msa0658480:intron 40.0%
TGACAATGAAAGGTAGCAGT+TGG - chr4_3:68568694-68568713 Msa0658480:intron 40.0%
TGATGCTTTGCAGTAGTTTG+TGG - chr4_3:68568868-68568887 Msa0658480:intron 40.0%
! GATGCTTTGCAGTAGTTTGT+GGG - chr4_3:68568869-68568888 Msa0658480:intron 40.0%
! ATGCTTTGCAGTAGTTTGTG+GGG - chr4_3:68568870-68568889 Msa0658480:intron 40.0%
GGGTTATTTGTAATCCCTAG+AGG - chr4_3:68569092-68569111 Msa0658480:intron 40.0%
CTCAAAAACGGAACACAATG+GGG + chr4_3:68569208-68569227 None:intergenic 40.0%
! AACTAAGTTGAGGGCATATC+AGG + chr4_3:68569286-68569305 None:intergenic 40.0%
GAGGAAGTGAAACTAAGTTG+AGG + chr4_3:68569296-68569315 None:intergenic 40.0%
!! TAATTGCTTTGGGCTTGTTG+TGG - chr4_3:68569580-68569599 Msa0658480:intron 40.0%
TTAAGACCTATAAGCCCAAC+AGG - chr4_3:68569710-68569729 Msa0658480:CDS 40.0%
AATCTACCTGTTGGGCTTAT+AGG + chr4_3:68569719-68569738 None:intergenic 40.0%
! TACTCCCAATAGTTTGGCTT+TGG - chr4_3:68569796-68569815 Msa0658480:CDS 40.0%
GTTGACCAAAGCCAAACTAT+TGG + chr4_3:68569804-68569823 None:intergenic 40.0%
! AATTTTTCCTCCATGGTCTC+AGG + chr4_3:68569994-68570013 None:intergenic 40.0%
GGAACTACTTATCCGTGATT+TGG - chr4_3:68570152-68570171 Msa0658480:CDS 40.0%
!!! AGACTGCTGGTTTTTCTGAT+AGG - chr4_3:68570232-68570251 Msa0658480:CDS 40.0%
TTTCAAGGTAGCAAGGATAG+GGG - chr4_3:68570369-68570388 Msa0658480:CDS 40.0%
TAGGCAGAGTTTACCATAAG+TGG + chr4_3:68570477-68570496 None:intergenic 40.0%
TATCGGGCCAAAATGAAAAG+GGG + chr4_3:68570586-68570605 None:intergenic 40.0%
GTTATCGGGCCAAAATGAAA+AGG + chr4_3:68570588-68570607 None:intergenic 40.0%
!!! GCTGATATTTGCTGTTTTGC+AGG - chr4_3:68570619-68570638 Msa0658480:CDS 40.0%
!!! TGGTGAACACCAGTTTTTTG+TGG - chr4_3:68570660-68570679 Msa0658480:CDS 40.0%
ATGATTGTTGCTCCAATTCC+TGG + chr4_3:68570770-68570789 None:intergenic 40.0%
GAGCAACAATCATTGAGTAC+TGG - chr4_3:68570777-68570796 Msa0658480:five_prime_UTR 40.0%
TTCCCCTTCTGGTAATTCTT+TGG - chr4_3:68570855-68570874 Msa0658480:five_prime_UTR 40.0%
TCCCCTTCTGGTAATTCTTT+GGG - chr4_3:68570856-68570875 Msa0658480:five_prime_UTR 40.0%
ACCCAAAGAATTACCAGAAG+GGG + chr4_3:68570860-68570879 None:intergenic 40.0%
CACCCAAAGAATTACCAGAA+GGG + chr4_3:68570861-68570880 None:intergenic 40.0%
ACACCCAAAGAATTACCAGA+AGG + chr4_3:68570862-68570881 None:intergenic 40.0%
TGGTAATTCTTTGGGTGTCT+GGG - chr4_3:68570864-68570883 Msa0658480:five_prime_UTR 40.0%
TTTGAGCAGATGCAAAACAG+GGG + chr4_3:68570990-68571009 None:intergenic 40.0%
GTAGTTTCTTTCCCACATGC+AGG - chr4_3:68563902-68563921 Msa0658480:three_prime_UTR 45.0%
AATGCGAAAGGGAATGCGAA+TGG + chr4_3:68563994-68564013 None:intergenic 45.0%
GGAGAGGTTAGAATGCGAAA+GGG + chr4_3:68564005-68564024 None:intergenic 45.0%
AAAATGTGGTTGTTGAGCCG+GGG + chr4_3:68564082-68564101 None:intergenic 45.0%
GAAAATGTGGTTGTTGAGCC+GGG + chr4_3:68564083-68564102 None:intergenic 45.0%
TCTCGAAAATGTCGAAACCC+TGG - chr4_3:68564157-68564176 Msa0658480:three_prime_UTR 45.0%
CTCGAAAATGTCGAAACCCT+GGG - chr4_3:68564158-68564177 Msa0658480:three_prime_UTR 45.0%
TCGAAAATGTCGAAACCCTG+GGG - chr4_3:68564159-68564178 Msa0658480:three_prime_UTR 45.0%
AGACTAGGGAAGTTGTCTGA+CGG + chr4_3:68564264-68564283 None:intergenic 45.0%
AGACAACTTCCCTAGTCTCA+AGG - chr4_3:68564266-68564285 Msa0658480:intron 45.0%
TTACGGCTTCCTTGAGACTA+GGG + chr4_3:68564278-68564297 None:intergenic 45.0%
TGTCAAACGAGGGATATCAG+CGG + chr4_3:68564376-68564395 None:intergenic 45.0%
TGATATCCCTCGTTTGACAC+CGG - chr4_3:68564377-68564396 Msa0658480:intron 45.0%
ATGCAGTTTAACCGTCTTGG+CGG - chr4_3:68564450-68564469 Msa0658480:intron 45.0%
GCTGGAAGAAGATCTTATGG+TGG - chr4_3:68564549-68564568 Msa0658480:CDS 45.0%
TTTCGGAATTTGAACCGTCC+AGG - chr4_3:68564607-68564626 Msa0658480:CDS 45.0%
TTCGGAATTTGAACCGTCCA+GGG - chr4_3:68564608-68564627 Msa0658480:CDS 45.0%
CTGATTCTGATTCTGACGAC+CGG + chr4_3:68564688-68564707 None:intergenic 45.0%
CAGAATCGATATGGTGGTAG+TGG - chr4_3:68564705-68564724 Msa0658480:CDS 45.0%
!! AATCGATATGGTGGTAGTGG+TGG - chr4_3:68564708-68564727 Msa0658480:CDS 45.0%
! TGAATCTAAGGCAGATGGAG+TGG - chr4_3:68564752-68564771 Msa0658480:CDS 45.0%
AGGCAGATGGAGTGGATAAT+TGG - chr4_3:68564760-68564779 Msa0658480:CDS 45.0%
GGCAGATGGAGTGGATAATT+GGG - chr4_3:68564761-68564780 Msa0658480:CDS 45.0%
AGATGGAGTGGATAATTGGG+CGG - chr4_3:68564764-68564783 Msa0658480:CDS 45.0%
CCGCTTCCTGTTAGATCTTA+TGG - chr4_3:68564798-68564817 Msa0658480:CDS 45.0%
TATGGTGGTTCTCGTGATTC+TGG - chr4_3:68564816-68564835 Msa0658480:CDS 45.0%
! TGGTTCTCGTGATTCTGGAA+TGG - chr4_3:68564821-68564840 Msa0658480:CDS 45.0%
CTTGGATCCAAAACCAACCT+AGG + chr4_3:68564936-68564955 None:intergenic 45.0%
!!! CTAGGTTGGTTTTGGATCCA+AGG - chr4_3:68564934-68564953 Msa0658480:intron 45.0%
TTGGATCCAAGGAAAGGTGA+TGG - chr4_3:68564945-68564964 Msa0658480:intron 45.0%
ACAGAACCATCACCTTTCCT+TGG + chr4_3:68564954-68564973 None:intergenic 45.0%
TTCTGTCAATGAATCTCCGG+TGG - chr4_3:68564968-68564987 Msa0658480:intron 45.0%
TGGCGGAGAAAGGATATGAT+TGG - chr4_3:68565045-68565064 Msa0658480:intron 45.0%
!! GAAGCTGGATTCTGAGATTG+AGG - chr4_3:68565070-68565089 Msa0658480:intron 45.0%
CTGCTGGAATGTGAACTTGT+AGG + chr4_3:68565113-68565132 None:intergenic 45.0%
CTACAAGTTCACATTCCAGC+AGG - chr4_3:68565111-68565130 Msa0658480:intron 45.0%
CGATTGGATTGAGCACTTGA+AGG + chr4_3:68565137-68565156 None:intergenic 45.0%
!! TTTTGGAGATGCCAAACCCA+GGG - chr4_3:68565205-68565224 Msa0658480:intron 45.0%
GCGGAAGATGGATCTTGAAT+TGG - chr4_3:68565259-68565278 Msa0658480:intron 45.0%
TCTATCAGGGACACGTGTAT+TGG - chr4_3:68565534-68565553 Msa0658480:intron 45.0%
!! TTGGTAGATAGGTTGGTGAC+TGG - chr4_3:68565951-68565970 Msa0658480:intron 45.0%
!! TAGATAGGTTGGTGACTGGA+TGG - chr4_3:68565955-68565974 Msa0658480:intron 45.0%
ACTCCAAGAAGGCTAGAAAG+AGG - chr4_3:68566463-68566482 Msa0658480:intron 45.0%
GGCTAGAAAGAGGTAAACCA+TGG - chr4_3:68566473-68566492 Msa0658480:intron 45.0%
AGGCAAGGGAATGAAAGCAA+GGG - chr4_3:68566634-68566653 Msa0658480:intron 45.0%
AATGAAAGCAAGGGGTAGTG+AGG - chr4_3:68566643-68566662 Msa0658480:intron 45.0%
TTGGGGGAATTAGCATGTCA+TGG - chr4_3:68566869-68566888 Msa0658480:intron 45.0%
TGGGGGAATTAGCATGTCAT+GGG - chr4_3:68566870-68566889 Msa0658480:intron 45.0%
! GGAGATTAGTCACCGCTAAA+CGG + chr4_3:68566912-68566931 None:intergenic 45.0%
GAACCTTAGGGCACACAAAA+TGG - chr4_3:68566938-68566957 Msa0658480:intron 45.0%
! CAACCATTTTGTGTGCCCTA+AGG + chr4_3:68566944-68566963 None:intergenic 45.0%
GTTCAGCAGGGGTGATAAAA+AGG - chr4_3:68567212-68567231 Msa0658480:intron 45.0%
TGTTGAAGTATATCCCCCTC+AGG + chr4_3:68567496-68567515 None:intergenic 45.0%
! ATGAGTATGGGTTGCACACA+TGG + chr4_3:68567520-68567539 None:intergenic 45.0%
GGCCATAAAAAGATCGGTAG+GGG - chr4_3:68567743-68567762 Msa0658480:intron 45.0%
! CTCCCCTACCGATCTTTTTA+TGG + chr4_3:68567748-68567767 None:intergenic 45.0%
TTATCTTTGGTCTGGTGCGA+AGG - chr4_3:68567799-68567818 Msa0658480:intron 45.0%
TGACAGCTCTATCTCGATGT+TGG + chr4_3:68568289-68568308 None:intergenic 45.0%
ACAATAGATCCTGCTGAAGG+TGG + chr4_3:68568313-68568332 None:intergenic 45.0%
!!! TGAGTTTTGAAAGTGACCCC+AGG + chr4_3:68568416-68568435 None:intergenic 45.0%
! TGGGGTCACTTTCAAAACTC+AGG - chr4_3:68568415-68568434 Msa0658480:intron 45.0%
! GGGGTCACTTTCAAAACTCA+GGG - chr4_3:68568416-68568435 Msa0658480:intron 45.0%
!!! CTAGTTTTGGCCAGGAAGTA+TGG - chr4_3:68568504-68568523 Msa0658480:intron 45.0%
TTTCAGCTTCCCATACTTCC+TGG + chr4_3:68568517-68568536 None:intergenic 45.0%
GAAGCTGAAAGACATCCAGT+AGG - chr4_3:68568527-68568546 Msa0658480:intron 45.0%
CTGTATTTGGAAGTGGAGTC+TGG - chr4_3:68568666-68568685 Msa0658480:intron 45.0%
GTATTTGGAAGTGGAGTCTG+GGG - chr4_3:68568668-68568687 Msa0658480:intron 45.0%
TCTGGGGAGTTGACAATGAA+AGG - chr4_3:68568684-68568703 Msa0658480:intron 45.0%
! TGCTTTGCAGTAGTTTGTGG+GGG - chr4_3:68568871-68568890 Msa0658480:intron 45.0%
TTTGGCTGTTACACCCTCTA+GGG + chr4_3:68569109-68569128 None:intergenic 45.0%
ATTTGGCTGTTACACCCTCT+AGG + chr4_3:68569110-68569129 None:intergenic 45.0%
AGGGTGTAACAGCCAAATAG+AGG - chr4_3:68569112-68569131 Msa0658480:intron 45.0%
CGCAACTATAACAGCAGCTA+TGG + chr4_3:68569154-68569173 None:intergenic 45.0%
! GGGTTTCATGAAGCATCTAC+AGG + chr4_3:68569188-68569207 None:intergenic 45.0%
!!! GTGTTCCGTTTTTGAGTACC+AGG - chr4_3:68569212-68569231 Msa0658480:intron 45.0%
GTTCGCCTGGTACTCAAAAA+CGG + chr4_3:68569220-68569239 None:intergenic 45.0%
GGGCATTACATCGACGATAA+GGG + chr4_3:68569498-68569517 None:intergenic 45.0%
TGGGCATTACATCGACGATA+AGG + chr4_3:68569499-68569518 None:intergenic 45.0%
GCTATAACAGGTGGCAGTAT+GGG + chr4_3:68569518-68569537 None:intergenic 45.0%
AGCTATAACAGGTGGCAGTA+TGG + chr4_3:68569519-68569538 None:intergenic 45.0%
TCAAATGAGGAATCTGCGGA+TGG - chr4_3:68570072-68570091 Msa0658480:CDS 45.0%
ACTAGAGAAAGAAAGGGAGC+TGG - chr4_3:68570131-68570150 Msa0658480:CDS 45.0%
TTGGGCAGAAAGCTGTTGAA+AGG - chr4_3:68570190-68570209 Msa0658480:CDS 45.0%
TTTCTGATAGGCCACCATCT+CGG - chr4_3:68570244-68570263 Msa0658480:CDS 45.0%
TTCAAGGTAGCAAGGATAGG+GGG - chr4_3:68570370-68570389 Msa0658480:CDS 45.0%
TGTTGCTCAAACTGTAGCTG+TGG - chr4_3:68570511-68570530 Msa0658480:CDS 45.0%
GGTCAAGTTCCAAAGAGAGA+TGG - chr4_3:68570640-68570659 Msa0658480:CDS 45.0%
TGGTGTTCACCATCTCTCTT+TGG + chr4_3:68570652-68570671 None:intergenic 45.0%
CTGGTAATTCTTTGGGTGTC+TGG - chr4_3:68570863-68570882 Msa0658480:five_prime_UTR 45.0%
TTGAGCAGATGCAAAACAGG+GGG + chr4_3:68570989-68571008 None:intergenic 45.0%
!!! TGTTTATTTATTTATTTTTT+TGG - chr4_3:68569316-68569335 Msa0658480:intron 5.0%
CGGTTTCTTTCCCTGCATGT+GGG + chr4_3:68563916-68563935 None:intergenic 50.0%
ACGGTTTCTTTCCCTGCATG+TGG + chr4_3:68563917-68563936 None:intergenic 50.0%
GAAAGGGAATGCGAATGGAG+AGG + chr4_3:68563989-68564008 None:intergenic 50.0%
GGGAGAGGTTAGAATGCGAA+AGG + chr4_3:68564006-68564025 None:intergenic 50.0%
GATAAAGAAGGGAAGGGGAG+AGG + chr4_3:68564021-68564040 None:intergenic 50.0%
TTTGCATGTTCTCGGAGCTC+CGG - chr4_3:68564042-68564061 Msa0658480:three_prime_UTR 50.0%
TCGAAACCCTGGGGCAATAT+CGG - chr4_3:68564168-68564187 Msa0658480:three_prime_UTR 50.0%
GTTACGGCTTCCTTGAGACT+AGG + chr4_3:68564279-68564298 None:intergenic 50.0%
TCGCTCTCTGAATTCACACG+TGG - chr4_3:68564327-68564346 Msa0658480:intron 50.0%
CTCTCTGAATTCACACGTGG+AGG - chr4_3:68564330-68564349 Msa0658480:intron 50.0%
GAGATGCTTCGTCTTCCTAC+CGG - chr4_3:68564402-68564421 Msa0658480:intron 50.0%
AGCAGAACGTTCCTTAGGAC+CGG + chr4_3:68564424-68564443 None:intergenic 50.0%
TCCTAAGGAACGTTCTGCTG+AGG - chr4_3:68564425-68564444 Msa0658480:intron 50.0%
TCCTCAGCAGAACGTTCCTT+AGG + chr4_3:68564429-68564448 None:intergenic 50.0%
AAGAGAAACCACCGCCAAGA+CGG + chr4_3:68564464-68564483 None:intergenic 50.0%
GGTGGTTTCTCTTCCTATGG+CGG - chr4_3:68564471-68564490 Msa0658480:CDS 50.0%
!! AGCCTCTGGTGATGGTTCTT+GGG - chr4_3:68564524-68564543 Msa0658480:CDS 50.0%
! GGCGCTGGAAGAAGATCTTA+TGG - chr4_3:68564546-68564565 Msa0658480:CDS 50.0%
! AACGTAGAGCGCCAAGTTCT+AGG - chr4_3:68564583-68564602 Msa0658480:CDS 50.0%
! ACGTAGAGCGCCAAGTTCTA+GGG - chr4_3:68564584-68564603 Msa0658480:CDS 50.0%
!! AGCGCCAAGTTCTAGGGTTT+CGG - chr4_3:68564590-68564609 Msa0658480:CDS 50.0%
GGCTGACGAGGTGGATAATT+GGG - chr4_3:68564629-68564648 Msa0658480:CDS 50.0%
TGACGACCGGAATCAAACGA+CGG + chr4_3:68564675-68564694 None:intergenic 50.0%
! GGTGGTGAATCTAAGGCAGA+TGG - chr4_3:68564747-68564766 Msa0658480:CDS 50.0%
TGGAATGGAACCAGATCGGT+GGG - chr4_3:68564836-68564855 Msa0658480:CDS 50.0%
GTTCTGCTGTGGAACCAGAT+CGG - chr4_3:68564865-68564884 Msa0658480:CDS 50.0%
GGCTTATTCGTCTTCACCAC+CGG + chr4_3:68564987-68565006 None:intergenic 50.0%
! CTCGCTGCACCAAATGGATT+CGG + chr4_3:68565008-68565027 None:intergenic 50.0%
TTGAGGCGAAAAAGACGAGC+AGG - chr4_3:68565087-68565106 Msa0658480:intron 50.0%
CTGGGTTTGGCATCTCCAAA+AGG + chr4_3:68565206-68565225 None:intergenic 50.0%
!! CTTTTGGAGATGCCAAACCC+AGG - chr4_3:68565204-68565223 Msa0658480:intron 50.0%
AAGCAAAACCTCCCTGGGTT+TGG + chr4_3:68565219-68565238 None:intergenic 50.0%
TCGCTAAGCAAAACCTCCCT+GGG + chr4_3:68565224-68565243 None:intergenic 50.0%
TTTGCTTAGCGAGCGTGGTA+AGG - chr4_3:68565232-68565251 Msa0658480:intron 50.0%
TTAGCGAGCGTGGTAAGGAT+TGG - chr4_3:68565237-68565256 Msa0658480:intron 50.0%
! TGGTAAGGATTGGCGGAAGA+TGG - chr4_3:68565247-68565266 Msa0658480:intron 50.0%
GAGGCAAGGGAATGAAAGCA+AGG - chr4_3:68566633-68566652 Msa0658480:intron 50.0%
GGCAAGGGAATGAAAGCAAG+GGG - chr4_3:68566635-68566654 Msa0658480:intron 50.0%
AAGTTTCCACCGCCGTTTAG+CGG - chr4_3:68566897-68566916 Msa0658480:intron 50.0%
! GATTAGTCACCGCTAAACGG+CGG + chr4_3:68566909-68566928 None:intergenic 50.0%
AATCTCCGTCTCCGAACCTT+AGG - chr4_3:68566925-68566944 Msa0658480:intron 50.0%
ATCTCCGTCTCCGAACCTTA+GGG - chr4_3:68566926-68566945 Msa0658480:intron 50.0%
ACAGCAGTACACCAGCCAAA+GGG + chr4_3:68568450-68568469 None:intergenic 50.0%
AACAGCAGTACACCAGCCAA+AGG + chr4_3:68568451-68568470 None:intergenic 50.0%
TTTGGCTGGTGTACTGCTGT+TGG - chr4_3:68568450-68568469 Msa0658480:intron 50.0%
GCTGAAAGACATCCAGTAGG+TGG - chr4_3:68568530-68568549 Msa0658480:intron 50.0%
TTTGAGTACCAGGCGAACAG+CGG - chr4_3:68569222-68569241 Msa0658480:intron 50.0%
!! ACTTTTCAGGCCTGAGACCA+TGG - chr4_3:68569981-68570000 Msa0658480:CDS 50.0%
GCATTGCACGTGTACCAGTT+TGG + chr4_3:68570110-68570129 None:intergenic 50.0%
CAGAAAGCTGTTGAAAGGCC+TGG - chr4_3:68570195-68570214 Msa0658480:CDS 50.0%
TCAAATGAGCCAGACCGAGA+TGG + chr4_3:68570261-68570280 None:intergenic 50.0%
! ATCTCGGTCTGGCTCATTTG+AGG - chr4_3:68570260-68570279 Msa0658480:CDS 50.0%
TCGACATATCACCTGTGCCA+CGG + chr4_3:68570323-68570342 None:intergenic 50.0%
CAAACTGTAGCTGTGGCAAC+TGG - chr4_3:68570518-68570537 Msa0658480:CDS 50.0%
TGTAGCTGTGGCAACTGGTT+GGG - chr4_3:68570523-68570542 Msa0658480:CDS 50.0%
TGTGGCAACTGGTTGGGAAA+TGG - chr4_3:68570529-68570548 Msa0658480:CDS 50.0%
GTGGCAACTGGTTGGGAAAT+GGG - chr4_3:68570530-68570549 Msa0658480:CDS 50.0%
TTCTTTGGGTGTCTGGGTGA+AGG - chr4_3:68570870-68570889 Msa0658480:five_prime_UTR 50.0%
CAAGCTCCGATATTGCCCCA+GGG + chr4_3:68564177-68564196 None:intergenic 55.0%
CTGGGGCAATATCGGAGCTT+GGG - chr4_3:68564176-68564195 Msa0658480:three_prime_UTR 55.0%
AGGGAAGTTGTCTGACGGAG+CGG + chr4_3:68564259-68564278 None:intergenic 55.0%
ACACGTGGAGGTTACTCCTC+CGG - chr4_3:68564342-68564361 Msa0658480:intron 55.0%
TATCCCTCGTTTGACACCGG+AGG - chr4_3:68564380-68564399 Msa0658480:intron 55.0%
! TCTCCTCCGGTGTCAAACGA+GGG + chr4_3:68564386-68564405 None:intergenic 55.0%
! ATCTCCTCCGGTGTCAAACG+AGG + chr4_3:68564387-68564406 None:intergenic 55.0%
! GGAAGACGAAGCATCTCCTC+CGG + chr4_3:68564399-68564418 None:intergenic 55.0%
TCGTCTTCCTACCGGTCCTA+AGG - chr4_3:68564410-68564429 Msa0658480:intron 55.0%
GAACGTTCCTTAGGACCGGT+AGG + chr4_3:68564420-68564439 None:intergenic 55.0%
CAGTTTAACCGTCTTGGCGG+TGG - chr4_3:68564453-68564472 Msa0658480:intron 55.0%
GGCGGTGGTTTCTCTTCCTA+TGG - chr4_3:68564468-68564487 Msa0658480:intron 55.0%
GGTTTCTCTTCCTATGGCGG+TGG - chr4_3:68564474-68564493 Msa0658480:CDS 55.0%
TTCTCTTCCTATGGCGGTGG+TGG - chr4_3:68564477-68564496 Msa0658480:CDS 55.0%
!! GAGCCTCTGGTGATGGTTCT+TGG - chr4_3:68564523-68564542 Msa0658480:CDS 55.0%
!! GCCTCTGGTGATGGTTCTTG+GGG - chr4_3:68564525-68564544 Msa0658480:CDS 55.0%
ATTATCCACCTCGTCAGCCC+TGG + chr4_3:68564628-68564647 None:intergenic 55.0%
GGGCTGACGAGGTGGATAAT+TGG - chr4_3:68564628-68564647 Msa0658480:CDS 55.0%
CGAGGTGGATAATTGGGCGT+CGG - chr4_3:68564635-68564654 Msa0658480:CDS 55.0%
TCGCTCCCGTCGTTTGATTC+CGG - chr4_3:68564666-68564685 Msa0658480:CDS 55.0%
GACGACCGGAATCAAACGAC+GGG + chr4_3:68564674-68564693 None:intergenic 55.0%
!! CGATATGGTGGTAGTGGTGG+TGG - chr4_3:68564711-68564730 Msa0658480:CDS 55.0%
!! TATGGTGGTAGTGGTGGTGG+TGG - chr4_3:68564714-68564733 Msa0658480:CDS 55.0%
!!! AGTGGTGGTGGTGGTGGTTT+TGG - chr4_3:68564723-68564742 Msa0658480:CDS 55.0%
GGAGTGGATAATTGGGCGGT+TGG - chr4_3:68564768-68564787 Msa0658480:CDS 55.0%
CTGGAATGGAACCAGATCGG+TGG - chr4_3:68564835-68564854 Msa0658480:CDS 55.0%
TGGTTCCACAGCAGAACCTC+TGG + chr4_3:68564862-68564881 None:intergenic 55.0%
TGCTGTGGAACCAGATCGGT+GGG - chr4_3:68564869-68564888 Msa0658480:CDS 55.0%
TGTTGCTGCTCCGTATCACG+CGG + chr4_3:68564906-68564925 None:intergenic 55.0%
!!! GCAGCGTCCTAGGTTGGTTT+TGG - chr4_3:68564926-68564945 Msa0658480:intron 55.0%
!! CGAATCCATTTGGTGCAGCG+AGG - chr4_3:68565006-68565025 Msa0658480:intron 55.0%
!! ATTTGGTGCAGCGAGGCCTA+GGG - chr4_3:68565013-68565032 Msa0658480:intron 55.0%
!! GAGGAAGTGTTGGCGGAGAA+AGG - chr4_3:68565035-68565054 Msa0658480:intron 55.0%
TTGAGCACTTGAAGGCCTGC+TGG + chr4_3:68565129-68565148 None:intergenic 55.0%
TGCTCAATCCAATCGCTCCG+AGG - chr4_3:68565142-68565161 Msa0658480:intron 55.0%
GCTCAATCCAATCGCTCCGA+GGG - chr4_3:68565143-68565162 Msa0658480:intron 55.0%
ATCTTGACCCTCGGAGCGAT+TGG + chr4_3:68565153-68565172 None:intergenic 55.0%
AATCGCTCCGAGGGTCAAGA+TGG - chr4_3:68565152-68565171 Msa0658480:intron 55.0%
AAGATGGTGCGCTGAAACCG+AGG - chr4_3:68565168-68565187 Msa0658480:intron 55.0%
CTCGCTAAGCAAAACCTCCC+TGG + chr4_3:68565225-68565244 None:intergenic 55.0%
! GAGGTTTTGCTTAGCGAGCG+TGG - chr4_3:68565227-68565246 Msa0658480:intron 55.0%
AGGGGTAGTGAGGCATGACT+AGG - chr4_3:68566653-68566672 Msa0658480:intron 55.0%
GGGGTAGTGAGGCATGACTA+GGG - chr4_3:68566654-68566673 Msa0658480:intron 55.0%
TGTGCCCTAAGGTTCGGAGA+CGG + chr4_3:68566933-68566952 None:intergenic 55.0%
AGCTGTCATCCACCTTCAGC+AGG - chr4_3:68568301-68568320 Msa0658480:intron 55.0%
!! TGTACTGCTGTTGGTGACCC+TGG - chr4_3:68568459-68568478 Msa0658480:intron 55.0%
!! GTACTGCTGTTGGTGACCCT+GGG - chr4_3:68568460-68568479 Msa0658480:intron 55.0%
TTTCAGGCCTGAGACCATGG+AGG - chr4_3:68569984-68570003 Msa0658480:CDS 55.0%
GTCTTTCCTGCTGACGAACC+AGG + chr4_3:68570216-68570235 None:intergenic 55.0%
TCGTCAGCAGGAAAGACTGC+TGG - chr4_3:68570219-68570238 Msa0658480:CDS 55.0%
AATGAGCCAGACCGAGATGG+TGG + chr4_3:68570258-68570277 None:intergenic 55.0%
CGACATATCACCTGTGCCAC+GGG + chr4_3:68570322-68570341 None:intergenic 55.0%
AAGGTAGCAAGGATAGGGGG+TGG - chr4_3:68570373-68570392 Msa0658480:CDS 55.0%
CTGTAGCTGTGGCAACTGGT+TGG - chr4_3:68570522-68570541 Msa0658480:CDS 55.0%
! GAGGATCGATTGGTCACGCG+CGG + chr4_3:68563941-68563960 None:intergenic 60.0%
CGGAGCTCCGGCTCCATTAA+CGG - chr4_3:68564054-68564073 Msa0658480:three_prime_UTR 60.0%
TTGAGCCGGGGCTCCGTTAA+TGG + chr4_3:68564070-68564089 None:intergenic 60.0%
CCAAGCTCCGATATTGCCCC+AGG + chr4_3:68564178-68564197 None:intergenic 60.0%
CCTGGGGCAATATCGGAGCT+TGG - chr4_3:68564175-68564194 Msa0658480:three_prime_UTR 60.0%
GGGCAATATCGGAGCTTGGG+CGG - chr4_3:68564179-68564198 Msa0658480:three_prime_UTR 60.0%
TTCGCGTTCTTCGGCTTCGG+CGG + chr4_3:68564217-68564236 None:intergenic 60.0%
CGCTTCGCGTTCTTCGGCTT+CGG + chr4_3:68564220-68564239 None:intergenic 60.0%
CGAAGCCGAAGAACGCGAAG+CGG - chr4_3:68564218-68564237 Msa0658480:exon 60.0%
! AGCTGCCGCTTCGCGTTCTT+CGG + chr4_3:68564226-68564245 None:intergenic 60.0%
CGAAGCGGCAGCTAAGTCAG+CGG - chr4_3:68564233-68564252 Msa0658480:intron 60.0%
! TCTTCCTATGGCGGTGGTGG+TGG - chr4_3:68564480-68564499 Msa0658480:CDS 60.0%
TGGTCGTGGAAGGGATCGTG+AGG - chr4_3:68564500-68564519 Msa0658480:CDS 60.0%
GGTCGTGGAAGGGATCGTGA+GGG - chr4_3:68564501-68564520 Msa0658480:CDS 60.0%
GCCCCAAGAACCATCACCAG+AGG + chr4_3:68564529-68564548 None:intergenic 60.0%
!!! GGTGGTGGTGGTGGTTTTGG+TGG - chr4_3:68564726-68564745 Msa0658480:CDS 60.0%
!!! GGTGGTGGTGGTTTTGGTGG+TGG - chr4_3:68564729-68564748 Msa0658480:CDS 60.0%
CTGCTGTGGAACCAGATCGG+TGG - chr4_3:68564868-68564887 Msa0658480:CDS 60.0%
!! GAACCAGATCGGTGGGCTAG+AGG - chr4_3:68564876-68564895 Msa0658480:CDS 60.0%
!! TAGAGGAGCGCCGCGTGATA+CGG - chr4_3:68564893-68564912 Msa0658480:intron 60.0%
AGCAGCAACAGCAGCGTCCT+AGG - chr4_3:68564916-68564935 Msa0658480:intron 60.0%
GCAACAGCAGCGTCCTAGGT+TGG - chr4_3:68564920-68564939 Msa0658480:intron 60.0%
CTAGGCCTCGCTGCACCAAA+TGG + chr4_3:68565014-68565033 None:intergenic 60.0%
!! CATTTGGTGCAGCGAGGCCT+AGG - chr4_3:68565012-68565031 Msa0658480:intron 60.0%
! GAGGCCTAGGGAGGAAGTGT+TGG - chr4_3:68565025-68565044 Msa0658480:intron 60.0%
!! GCCTAGGGAGGAAGTGTTGG+CGG - chr4_3:68565028-68565047 Msa0658480:intron 60.0%
TCCGCCAACACTTCCTCCCT+AGG + chr4_3:68565032-68565051 None:intergenic 60.0%
CAGCGCACCATCTTGACCCT+CGG + chr4_3:68565162-68565181 None:intergenic 60.0%
TGGAGATGCCAAACCCAGGG+AGG - chr4_3:68565208-68565227 Msa0658480:intron 60.0%
GCGAGCGTGGTAAGGATTGG+CGG - chr4_3:68565240-68565259 Msa0658480:intron 60.0%
!! TGGAGCATCGCGCCGTTGAT+AGG - chr4_3:68565279-68565298 Msa0658480:intron 60.0%
TAGTCACCGCTAAACGGCGG+TGG + chr4_3:68566906-68566925 None:intergenic 60.0%
CTCAGGGCAGCATCTCCCTT+TGG - chr4_3:68568432-68568451 Msa0658480:intron 60.0%
ACATCCAGTAGGTGGCTCGC+TGG - chr4_3:68568538-68568557 Msa0658480:intron 60.0%
AAAGCCAGCGAGCCACCTAC+TGG + chr4_3:68568545-68568564 None:intergenic 60.0%
GGAGGTCAAGGGGACTCCAA+AGG - chr4_3:68568990-68569009 Msa0658480:intron 60.0%
GAGGAATCTGCGGATGGTGC+TGG - chr4_3:68570078-68570097 Msa0658480:CDS 60.0%
! GAATCTGCGGATGGTGCTGG+TGG - chr4_3:68570081-68570100 Msa0658480:CDS 60.0%
!! GGTGCTGGTGGAGACCAAAC+TGG - chr4_3:68570093-68570112 Msa0658480:CDS 60.0%
! GAAAGGCCTGGTTCGTCAGC+AGG - chr4_3:68570207-68570226 Msa0658480:CDS 60.0%
GATAGGCCACCATCTCGGTC+TGG - chr4_3:68570249-68570268 Msa0658480:CDS 60.0%
! TCGATTGGTCACGCGCGGCA+CGG + chr4_3:68563936-68563955 None:intergenic 65.0%
CGGGGCTCCGTTAATGGAGC+CGG + chr4_3:68564064-68564083 None:intergenic 65.0%
CGGCTCCATTAACGGAGCCC+CGG - chr4_3:68564062-68564081 Msa0658480:three_prime_UTR 65.0%
CGGAGCTTGGGCGGCTGATT+CGG - chr4_3:68564188-68564207 Msa0658480:three_prime_UTR 65.0%
!! AGCTTGGGCGGCTGATTCGG+AGG - chr4_3:68564191-68564210 Msa0658480:three_prime_UTR 65.0%
CGTGGAGGTTACTCCTCCGG+TGG - chr4_3:68564345-68564364 Msa0658480:intron 65.0%
GGAGGTTACTCCTCCGGTGG+TGG - chr4_3:68564348-68564367 Msa0658480:intron 65.0%
GATATCAGCGGCGCCACCAC+CGG + chr4_3:68564364-68564383 None:intergenic 65.0%
ACGACCACCACCACCGCCAT+AGG + chr4_3:68564487-68564506 None:intergenic 65.0%
!! TATGGCGGTGGTGGTGGTCG+TGG - chr4_3:68564486-68564505 Msa0658480:CDS 65.0%
!! CGGTGGTGGTGGTCGTGGAA+GGG - chr4_3:68564491-68564510 Msa0658480:CDS 65.0%
AGGGATCGTGAGGGAGCCTC+TGG - chr4_3:68564510-68564529 Msa0658480:CDS 65.0%
CGTGAGGGAGCCTCTGGTGA+TGG - chr4_3:68564516-68564535 Msa0658480:CDS 65.0%
! GGTGATGGTTCTTGGGGCGC+TGG - chr4_3:68564531-68564550 Msa0658480:CDS 65.0%
TGAACCGTCCAGGGCTGACG+AGG - chr4_3:68564617-68564636 Msa0658480:CDS 65.0%
TCCACCTCGTCAGCCCTGGA+CGG + chr4_3:68564624-68564643 None:intergenic 65.0%
!! GGTGGTAGTGGTGGTGGTGG+TGG - chr4_3:68564717-68564736 Msa0658480:CDS 65.0%
GAACCAGATCGGTGGGCCAG+AGG - chr4_3:68564843-68564862 Msa0658480:CDS 65.0%
GAACCTCTGGCCCACCGATC+TGG + chr4_3:68564849-68564868 None:intergenic 65.0%
GTGGGCCAGAGGTTCTGCTG+TGG - chr4_3:68564854-68564873 Msa0658480:CDS 65.0%
GCTCCTCTAGCCCACCGATC+TGG + chr4_3:68564882-68564901 None:intergenic 65.0%
GGGCAGCATCTCCCTTTGGC+TGG - chr4_3:68568436-68568455 Msa0658480:intron 65.0%
TGCAACAGCCGCTGTTCGCC+TGG + chr4_3:68569233-68569252 None:intergenic 65.0%
CTGTGCCACGGGATCGAGGT+CGG + chr4_3:68570311-68570330 None:intergenic 65.0%
TCACCTGTGCCACGGGATCG+AGG + chr4_3:68570315-68570334 None:intergenic 65.0%
!! GCGGTGGTGGTGGTCGTGGA+AGG - chr4_3:68564490-68564509 Msa0658480:CDS 70.0%
ACCGTCCAGGGCTGACGAGG+TGG - chr4_3:68564620-68564639 Msa0658480:CDS 70.0%
TGGTGCAGCGAGGCCTAGGG+AGG - chr4_3:68565016-68565035 Msa0658480:intron 70.0%
ACGGACCGACCTCGATCCCG+TGG - chr4_3:68570303-68570322 Msa0658480:CDS 70.0%
CGACCTCGATCCCGTGGCAC+AGG - chr4_3:68570309-68570328 Msa0658480:CDS 70.0%
ATCAGCGGCGCCACCACCGG+AGG + chr4_3:68564361-68564380 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 68563883 68571009 68563883 ID=Msa0658480;Name=Msa0658480
chr4_3 mRNA 68563883 68571009 68563883 ID=Msa0658480-mRNA-1;Parent=Msa0658480;Name=Msa0658480-mRNA-1;_AED=0.01;_eAED=0.01;_QI=282|1|1|1|0.5|0.66|3|344|530
chr4_3 exon 68563883 68564251 68563883 ID=Msa0658480-mRNA-1:exon:19898;Parent=Msa0658480-mRNA-1
chr4_3 exon 68564471 68564902 68564471 ID=Msa0658480-mRNA-1:exon:19897;Parent=Msa0658480-mRNA-1
chr4_3 exon 68569592 68571009 68569592 ID=Msa0658480-mRNA-1:exon:19896;Parent=Msa0658480-mRNA-1
chr4_3 five_prime_UTR 68570728 68571009 68570728 ID=Msa0658480-mRNA-1:five_prime_utr;Parent=Msa0658480-mRNA-1
chr4_3 CDS 68569592 68570727 68569592 ID=Msa0658480-mRNA-1:cds;Parent=Msa0658480-mRNA-1
chr4_3 CDS 68564471 68564902 68564471 ID=Msa0658480-mRNA-1:cds;Parent=Msa0658480-mRNA-1
chr4_3 CDS 68564227 68564251 68564227 ID=Msa0658480-mRNA-1:cds;Parent=Msa0658480-mRNA-1
chr4_3 three_prime_UTR 68563883 68564226 68563883 ID=Msa0658480-mRNA-1:three_prime_utr;Parent=Msa0658480-mRNA-1
Gene Sequence

>Msa0658480

ATGTCGAAACCCTGGGGCAATATCGGAGCTTGGGCGGCTGATTCGGAGGCCGCCGAAGCCGAAGAACGCGAAGCGGCAGCTAAGTCAGCGGCCGCTCCGTCAGACAACTTCCCTAGTCTCAAGGAAGCCGTAACTACCAAACCGAAGAAGAATAAGAAGATGTCGCTCTCTGAATTCACACGTGGAGGTTACTCCTCCGGTGGTGGCGCCGCTGATATCCCTCGTTTGACACCGGAGGAGATGCTTCGTCTTCCTACCGGTCCTAAGGAACGTTCTGCTGAGGAAATGCAGTTTAACCGTCTTGGCGGTGGTTTCTCTTCCTATGGCGGTGGTGGTGGTCGTGGAAGGGATCGTGAGGGAGCCTCTGGTGATGGTTCTTGGGGCGCTGGAAGAAGATCTTATGGTGGATTTGATGATGAACGTAGAGCGCCAAGTTCTAGGGTTTCGGAATTTGAACCGTCCAGGGCTGACGAGGTGGATAATTGGGCGTCGGTGAAGAAGTCGCTCCCGTCGTTTGATTCCGGTCGTCAGAATCAGAATCAGAATCGATATGGTGGTAGTGGTGGTGGTGGTGGTTTTGGTGGTGGTGAATCTAAGGCAGATGGAGTGGATAATTGGGCGGTTGGTAAGAAACCGCTTCCTGTTAGATCTTATGGTGGTTCTCGTGATTCTGGAATGGAACCAGATCGGTGGGCCAGAGGTTCTGCTGTGGAACCAGATCGGTGGGCTAGAGGAGCGCCGCGTGATACGGAGCAGCAACAGCAGCGTCCTAGGTTGGTTTTGGATCCAAGGAAAGGTGATGGTTCTGTCAATGAATCTCCGGTGGTGAAGACGAATAAGCCGAATCCATTTGGTGCAGCGAGGCCTAGGGAGGAAGTGTTGGCGGAGAAAGGATATGATTGGAAGAAGCTGGATTCTGAGATTGAGGCGAAAAAGACGAGCAGGCCTACAAGTTCACATTCCAGCAGGCCTTCAAGTGCTCAATCCAATCGCTCCGAGGGTCAAGATGGTGCGCTGAAACCGAGGCCAAAAGTGAATCCTTTTGGAGATGCCAAACCCAGGGAGGTTTTGCTTAGCGAGCGTGGTAAGGATTGGCGGAAGATGGATCTTGAATTGGAGCATCGCGCCGTTGATAGGCCTGAGACCATGGAGGAAAAATTATTAAAAGAAGAGATTGATAATTTGAAGAAGCAACTTGAGAAGGAGCCTACAGTTAATTCAAATGAGGAATCTGCGGATGGTGCTGGTGGAGACCAAACTGGTACACGTGCAATGCTACTAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCTGGTTCGTCAGCAGGAAAGACTGCTGGTTTTTCTGATAGGCCACCATCTCGGTCTGGCTCATTTGAGGATTCAAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGCACAGGTGATATGTCGATGCGCCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGATAGGGGGTGGTTTTCGAATAGCAGAGATTTGAATAGGTCAAGTTCCAAAGAGAGATGGTGA
Protein sequence

>Msa0658480

MSKPWGNIGAWAADSEAAEAEEREAAAKSAAAPSDNFPSLKEAVTTKPKKNKKMSLSEFTRGGYSSGGGAADIPRLTPEEMLRLPTGPKERSAEEMQFNRLGGGFSSYGGGGGRGRDREGASGDGSWGAGRRSYGGFDDERRAPSSRVSEFEPSRADEVDNWASVKKSLPSFDSGRQNQNQNRYGGSGGGGGFGGGESKADGVDNWAVGKKPLPVRSYGGSRDSGMEPDRWARGSAVEPDRWARGAPRDTEQQQQRPRLVLDPRKGDGSVNESPVVKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGQDGALKPRPKVNPFGDAKPREVLLSERGKDWRKMDLELEHRAVDRPETMEEKLLKEEIDNLKKQLEKEPTVNSNEESADGAGGDQTGTRAMLLEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSMRPTDDRRQFQGSKDRGWFSNSRDLNRSSSKERW*