AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0610090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610090 MtrunA17_Chr8g0381521 96.422 531 16 2 1 530 1 529 0.0 1003
Msa0610090 MtrunA17_Chr4g0037531 35.211 355 159 12 5 313 8 337 7.41e-31 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0610090 AT3G26400.1 54.417 566 188 16 1 530 1 532 1.32e-149 439
Msa0610090 AT1G13020.1 56.261 567 193 16 1 530 1 549 2.64e-136 406
Msa0610090 AT4G38710.1 41.411 326 132 14 28 312 36 343 9.17e-29 119
Msa0610090 AT4G38710.2 41.411 326 132 14 28 312 36 343 9.46e-29 119

Find 254 sgRNAs with CRISPR-Local

Find 617 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCCTTCTGGTAATTCTT+TGG 0.156604 4_2:+57733718 Msa0610090:three_prime_UTR
GAGCCTCTGGTGATGGTTCT+TGG 0.179415 4_2:+57727385 Msa0610090:CDS
CTGGTAATTCTTTGGGTGTC+TGG 0.211551 4_2:+57733726 Msa0610090:three_prime_UTR
CCGCTTCCTGTTAGATCTTA+TGG 0.218066 4_2:+57727660 Msa0610090:CDS
AGCCTCTGGTGATGGTTCTT+GGG 0.247824 4_2:+57727386 Msa0610090:CDS
TCCCCTTCTGGTAATTCTTT+GGG 0.248571 4_2:+57733719 Msa0610090:three_prime_UTR
TATGGTGGTTCTCGTGATTC+TGG 0.249533 4_2:+57727678 Msa0610090:CDS
AGGCAGATGGAGTGGATAAT+TGG 0.253571 4_2:+57727622 Msa0610090:CDS
TTGAGCCGGGGCTCCGTTAA+TGG 0.262941 4_2:-57726930 None:intergenic
CAAAACTTAATTGAAGATTA+TGG 0.270334 4_2:+57733781 Msa0610090:three_prime_UTR
TTGGATGATAAAGTTCGTTT+TGG 0.275669 4_2:+57733034 Msa0610090:CDS
ATGATTGTTGCTCCAATTCC+TGG 0.276606 4_2:-57733630 None:intergenic
GCAGCGTCCTAGGTTGGTTT+TGG 0.292176 4_2:+57727788 Msa0610090:CDS
GTTCAATTTACTCCAGGAAT+TGG 0.296707 4_2:+57733618 Msa0610090:three_prime_UTR
GGGCTGACGAGGTGGATAAT+TGG 0.300105 4_2:+57727490 Msa0610090:CDS
TCTCCAAAAGGATTCACTTT+TGG 0.308158 4_2:-57728053 None:intergenic
AGGCCAAAAGTGAATCCTTT+TGG 0.324714 4_2:+57728050 Msa0610090:CDS
GGAACTACTTATCCGTGATT+TGG 0.344370 4_2:+57733015 Msa0610090:CDS
CGGAGCTTGGGCGGCTGATT+CGG 0.344734 4_2:+57727050 Msa0610090:CDS
CGAATAGCAGAGATTTGAAT+AGG 0.354477 4_2:+57733263 Msa0610090:CDS
TCGCTCCCGTCGTTTGATTC+CGG 0.356824 4_2:+57727528 Msa0610090:CDS
AGCGCCAAGTTCTAGGGTTT+CGG 0.360129 4_2:+57727452 Msa0610090:CDS
GACATCTTCTTATTCTTCTT+CGG 0.360505 4_2:-57727168 None:intergenic
AAAATTGAAGAGAATGAGAT+TGG 0.361009 4_2:-57726989 None:intergenic
CGCTTCGCGTTCTTCGGCTT+CGG 0.362008 4_2:-57727079 None:intergenic
GATTTGAGCAGATGCAAAAC+AGG 0.366946 4_2:-57733852 None:intergenic
TTGAGATGCAATAACAGATT+AGG 0.368876 4_2:-57733677 None:intergenic
GGTGGTAGTGGTGGTGGTGG+TGG 0.370793 4_2:+57727579 Msa0610090:CDS
TACAAGTAATAAATAGTATT+AGG 0.371235 4_2:-57733580 None:intergenic
TGGAGCATCGCGCCGTTGAT+AGG 0.377186 4_2:+57728141 Msa0610090:CDS
TCGAAACCCTGGGGCAATAT+CGG 0.378455 4_2:+57727030 Msa0610090:CDS
CTTCTTATTCTTCTTCGGTT+TGG 0.379482 4_2:-57727163 None:intergenic
TGGTGTTCACCATCTCTCTT+TGG 0.380963 4_2:-57733512 None:intergenic
CTTCTTCGGTTTGGTAGTTA+CGG 0.381729 4_2:-57727154 None:intergenic
GGCTGACGAGGTGGATAATT+GGG 0.383328 4_2:+57727491 Msa0610090:CDS
AACGTAGAGCGCCAAGTTCT+AGG 0.393943 4_2:+57727445 Msa0610090:CDS
TGGTAATTCTTTGGGTGTCT+GGG 0.396695 4_2:+57733727 Msa0610090:three_prime_UTR
AGCTGCCGCTTCGCGTTCTT+CGG 0.399874 4_2:-57727085 None:intergenic
ATCTCGGTCTGGCTCATTTG+AGG 0.400037 4_2:+57733123 Msa0610090:CDS
CATTTGGTGCAGCGAGGCCT+AGG 0.404433 4_2:+57727874 Msa0610090:CDS
CGGAGCTCCGGCTCCATTAA+CGG 0.409603 4_2:+57726917 Msa0610090:five_prime_UTR
GCGGAAGATGGATCTTGAAT+TGG 0.411399 4_2:+57728121 Msa0610090:CDS
AAGCAAAACCTCCCTGGGTT+TGG 0.412864 4_2:-57728078 None:intergenic
GGCGGTGGTTTCTCTTCCTA+TGG 0.414541 4_2:+57727330 Msa0610090:CDS
GCGGTGGTGGTGGTCGTGGA+AGG 0.415953 4_2:+57727352 Msa0610090:CDS
ACGAATAAGCCGAATCCATT+TGG 0.416658 4_2:+57727858 Msa0610090:CDS
GAGGAAGTGTTGGCGGAGAA+AGG 0.421760 4_2:+57727897 Msa0610090:CDS
GAACCTCTGGCCCACCGATC+TGG 0.424689 4_2:-57727708 None:intergenic
TGGTTCTGTCAATGAATCTC+TGG 0.425594 4_2:+57727827 Msa0610090:CDS
GGTGATGGTTCTTGGGGCGC+TGG 0.428963 4_2:+57727393 Msa0610090:CDS
CCAAGCTCCGATATTGCCCC+AGG 0.429446 4_2:-57727037 None:intergenic
CTAGGCCTCGCTGCACCAAA+TGG 0.435351 4_2:-57727873 None:intergenic
GAACCACCATAAGATCTAAC+AGG 0.437526 4_2:-57727666 None:intergenic
CTCGCTAAGCAAAACCTCCC+TGG 0.437584 4_2:-57728084 None:intergenic
AATCAGAATCAGAATCGATA+TGG 0.439413 4_2:+57727558 Msa0610090:CDS
CTCGCTGCACCAAATGGATT+CGG 0.440455 4_2:-57727867 None:intergenic
GGCGCTGGAAGAAGATCTTA+TGG 0.445499 4_2:+57727408 Msa0610090:CDS
AGGATATGATTGGAAGAAGC+TGG 0.446369 4_2:+57727917 Msa0610090:CDS
TTGAGCACTTGAAGGCCTGC+TGG 0.447154 4_2:-57727988 None:intergenic
TTTGCATGTTCTCGGAGCTC+CGG 0.449709 4_2:+57726905 Msa0610090:five_prime_UTR
ATCTTGACCCTCGGAGCGAT+TGG 0.449872 4_2:-57728012 None:intergenic
CGATATGGTGGTAGTGGTGG+TGG 0.449924 4_2:+57727573 Msa0610090:CDS
TGGTTCCACAGCAGAACCTC+TGG 0.451855 4_2:-57727721 None:intergenic
TTCTCTTCCTATGGCGGTGG+TGG 0.452323 4_2:+57727339 Msa0610090:CDS
TTCTTTGGGTGTCTGGGTGA+AGG 0.456170 4_2:+57733733 Msa0610090:three_prime_UTR
GAAAGGCCTGGTTCGTCAGC+AGG 0.456280 4_2:+57733070 Msa0610090:CDS
ACAGAACCATCACCTTTCCT+TGG 0.459101 4_2:-57727813 None:intergenic
GATGACAGAAGACAATTTCA+AGG 0.460874 4_2:+57733217 Msa0610090:CDS
CGATTGGATTGAGCACTTGA+AGG 0.461514 4_2:-57727996 None:intergenic
CTGGGGCAATATCGGAGCTT+GGG 0.462695 4_2:+57727038 Msa0610090:CDS
GCATTGCACGTGTACCAGTT+TGG 0.464629 4_2:-57732970 None:intergenic
TCTTCCTATGGCGGTGGTGG+TGG 0.465249 4_2:+57727342 Msa0610090:CDS
GATAAAGAAGGGAAGGGGAG+AGG 0.465933 4_2:-57726881 None:intergenic
TGGCGGAGAAAGGATATGAT+TGG 0.466422 4_2:+57727907 Msa0610090:CDS
CCTGGGGCAATATCGGAGCT+TGG 0.467551 4_2:+57727037 Msa0610090:CDS
TGGTAAGGATTGGCGGAAGA+TGG 0.467995 4_2:+57728109 Msa0610090:CDS
CAGTTTAACCGTCTTGGCGG+TGG 0.470233 4_2:+57727315 Msa0610090:CDS
TATGGCGGTGGTGGTGGTCG+TGG 0.471152 4_2:+57727348 Msa0610090:CDS
GGCAGATGGAGTGGATAATT+GGG 0.471534 4_2:+57727623 Msa0610090:CDS
GAAAATGTGGTTGTTGAGCC+GGG 0.472266 4_2:-57726943 None:intergenic
GCTCCTCTAGCCCACCGATC+TGG 0.472872 4_2:-57727741 None:intergenic
TTTCGGAATTTGAACCGTCC+AGG 0.476666 4_2:+57727469 Msa0610090:CDS
CTGGGTTTGGCATCTCCAAA+AGG 0.479404 4_2:-57728065 None:intergenic
CAATGCTACTAGAGAAAGAA+AGG 0.479482 4_2:+57732987 Msa0610090:CDS
ACGGTTTCTTTCCCTGCATG+TGG 0.481615 4_2:-57726777 None:intergenic
GTCTTTCCTGCTGACGAACC+AGG 0.482824 4_2:-57733076 None:intergenic
AGGGATCGTGAGGGAGCCTC+TGG 0.485594 4_2:+57727372 Msa0610090:CDS
AGCAGCAACAGCAGCGTCCT+AGG 0.485970 4_2:+57727778 Msa0610090:CDS
TCCTCAGCAGAACGTTCCTT+AGG 0.488461 4_2:-57727288 None:intergenic
GTAGTTTCTTTCCCACATGC+AGG 0.491422 4_2:+57726765 Msa0610090:five_prime_UTR
TGAAAATGTGGTTGTTGAGC+CGG 0.492140 4_2:-57726944 None:intergenic
GTGTTGTTGTGTTGAAAATG+TGG 0.492848 4_2:-57726956 None:intergenic
TCCGCCAACACTTCCTCCCT+AGG 0.493899 4_2:-57727891 None:intergenic
ACGTAGAGCGCCAAGTTCTA+GGG 0.497869 4_2:+57727446 Msa0610090:CDS
CTCGAAAATGTCGAAACCCT+GGG 0.499446 4_2:+57727020 Msa0610090:exon
ATTATCCACCTCGTCAGCCC+TGG 0.500158 4_2:-57727487 None:intergenic
ATTTCAAGGTAGCAAGGATA+GGG 0.500167 4_2:+57733231 Msa0610090:CDS
AATTTCAAGGTAGCAAGGAT+AGG 0.501060 4_2:+57733230 Msa0610090:CDS
GAACATGCAAAAGATAAAGA+AGG 0.502109 4_2:-57726893 None:intergenic
CAGAATCGATATGGTGGTAG+TGG 0.502726 4_2:+57727567 Msa0610090:CDS
CTGCTGGAATGTGAACTTGT+AGG 0.505442 4_2:-57727972 None:intergenic
TTAGCGAGCGTGGTAAGGAT+TGG 0.506880 4_2:+57728099 Msa0610090:CDS
TCGTCTTCCTACCGGTCCTA+AGG 0.507007 4_2:+57727272 Msa0610090:CDS
CGGTGGTGGTGGTCGTGGAA+GGG 0.507473 4_2:+57727353 Msa0610090:CDS
TATGGTGGTAGTGGTGGTGG+TGG 0.507632 4_2:+57727576 Msa0610090:CDS
AAGATGGTGCGCTGAAACCG+AGG 0.507806 4_2:+57728030 Msa0610090:CDS
CGTGAGGGAGCCTCTGGTGA+TGG 0.508685 4_2:+57727378 Msa0610090:CDS
CAGAAAGCTGTTGAAAGGCC+TGG 0.509843 4_2:+57733058 Msa0610090:CDS
AATTCCGAAACCCTAGAACT+TGG 0.511211 4_2:-57727456 None:intergenic
TGCTGTGGAACCAGATCGGT+GGG 0.512724 4_2:+57727731 Msa0610090:CDS
CGACATATCACCTGTGCCAC+GGG 0.515058 4_2:-57733182 None:intergenic
GCAACAGCAGCGTCCTAGGT+TGG 0.516875 4_2:+57727782 Msa0610090:CDS
TAGAGGAGCGCCGCGTGATA+CGG 0.516900 4_2:+57727755 Msa0610090:CDS
GGGAGAGGTTAGAATGCGAA+AGG 0.517605 4_2:-57726866 None:intergenic
GCCTCTGGTGATGGTTCTTG+GGG 0.518261 4_2:+57727387 Msa0610090:CDS
TTCGGAATTTGAACCGTCCA+GGG 0.519440 4_2:+57727470 Msa0610090:CDS
GGAGTGGATAATTGGGCGGT+TGG 0.520476 4_2:+57727630 Msa0610090:CDS
CAGCGCACCATCTTGACCCT+CGG 0.521094 4_2:-57728021 None:intergenic
AATTGTCTTCTGTCATCAGT+AGG 0.523447 4_2:-57733211 None:intergenic
CGGGGCTCCGTTAATGGAGC+CGG 0.524102 4_2:-57726924 None:intergenic
TTTGCTTAGCGAGCGTGGTA+AGG 0.524114 4_2:+57728094 Msa0610090:CDS
CTGATTCTGATTCTGACGAC+CGG 0.524196 4_2:-57727547 None:intergenic
GATAGGCCACCATCTCGGTC+TGG 0.525689 4_2:+57733112 Msa0610090:CDS
GCCTAGGGAGGAAGTGTTGG+CGG 0.526765 4_2:+57727890 Msa0610090:CDS
GAAATGCAGTTTAACCGTCT+TGG 0.527709 4_2:+57727309 Msa0610090:CDS
GTTACGGCTTCCTTGAGACT+AGG 0.528834 4_2:-57727138 None:intergenic
GGTTTCTCTTCCTATGGCGG+TGG 0.531483 4_2:+57727336 Msa0610090:CDS
TCGTCAGCAGGAAAGACTGC+TGG 0.532956 4_2:+57733082 Msa0610090:CDS
GGAGGTTACTCCTCCGGTGG+TGG 0.533255 4_2:+57727210 Msa0610090:CDS
TTGGGCAGAAAGCTGTTGAA+AGG 0.534800 4_2:+57733053 Msa0610090:CDS
GATATCAGCGGCGCCACCAC+CGG 0.535066 4_2:-57727223 None:intergenic
CGACCTCGATCCCGTGGCAC+AGG 0.538214 4_2:+57733172 Msa0610090:CDS
ATTTGAGGATTCAAGAAGTG+TGG 0.538801 4_2:+57733138 Msa0610090:CDS
GAGATGCTTCGTCTTCCTAC+CGG 0.539084 4_2:+57727264 Msa0610090:CDS
AGCAGAACGTTCCTTAGGAC+CGG 0.539689 4_2:-57727283 None:intergenic
CTTGGATCCAAAACCAACCT+AGG 0.540620 4_2:-57727795 None:intergenic
ATGCAGTTTAACCGTCTTGG+CGG 0.540678 4_2:+57727312 Msa0610090:CDS
TTTGAAGAAGCAACTTGAGA+AGG 0.542051 4_2:+57732898 Msa0610090:CDS
GAGGCCTAGGGAGGAAGTGT+TGG 0.542683 4_2:+57727887 Msa0610090:CDS
TCGATTGGTCACGCGCGGCA+CGG 0.547361 4_2:-57726796 None:intergenic
TAATAAATAGTATTAGGCTC+TGG 0.547578 4_2:-57733574 None:intergenic
TCGCTAAGCAAAACCTCCCT+GGG 0.548787 4_2:-57728083 None:intergenic
TGCAAAAGATAAAGAAGGGA+AGG 0.548918 4_2:-57726888 None:intergenic
TCTCGAAAATGTCGAAACCC+TGG 0.549880 4_2:+57727019 Msa0610090:exon
TAATTGAAGATTATGGAACT+TGG 0.550353 4_2:+57733788 Msa0610090:three_prime_UTR
ACGACCACCACCACCGCCAT+AGG 0.553964 4_2:-57727346 None:intergenic
GAAGCTGGATTCTGAGATTG+AGG 0.554898 4_2:+57727932 Msa0610090:CDS
CGGTTTCTTTCCCTGCATGT+GGG 0.557024 4_2:-57726776 None:intergenic
ACTAGAGAAAGAAAGGGAGC+TGG 0.557129 4_2:+57732994 Msa0610090:CDS
CTGCTGTGGAACCAGATCGG+TGG 0.557733 4_2:+57727730 Msa0610090:CDS
TTACGGCTTCCTTGAGACTA+GGG 0.558909 4_2:-57727137 None:intergenic
GAGCAACAATCATTGAGTAC+TGG 0.559760 4_2:+57733640 Msa0610090:three_prime_UTR
CTACAAGTTCACATTCCAGC+AGG 0.560772 4_2:+57727973 Msa0610090:CDS
ACACGTGGAGGTTACTCCTC+CGG 0.561472 4_2:+57727204 Msa0610090:CDS
AGATTAAAGAGAGGATCGAT+TGG 0.564829 4_2:-57726811 None:intergenic
GGTGCTGGTGGAGACCAAAC+TGG 0.565183 4_2:+57732956 Msa0610090:CDS
GCGAGCGTGGTAAGGATTGG+CGG 0.565425 4_2:+57728102 Msa0610090:CDS
TTGGATCCAAGGAAAGGTGA+TGG 0.566233 4_2:+57727807 Msa0610090:CDS
GAGGAATCTGCAGATGGTGC+TGG 0.566840 4_2:+57732941 Msa0610090:CDS
TGGTCGTGGAAGGGATCGTG+AGG 0.567376 4_2:+57727362 Msa0610090:CDS
CGAAGCCGAAGAACGCGAAG+CGG 0.568032 4_2:+57727080 Msa0610090:CDS
GGAAGACGAAGCATCTCCTC+CGG 0.571095 4_2:-57727258 None:intergenic
TCCTCATTTGAATTAACTGT+AGG 0.572168 4_2:-57732923 None:intergenic
GGAGAGGTTAGAATGCGAAA+GGG 0.574330 4_2:-57726865 None:intergenic
GCCTACAGTTAATTCAAATG+AGG 0.574899 4_2:+57732922 Msa0610090:CDS
TAGTTTCTTTCCCACATGCA+GGG 0.575068 4_2:+57726766 Msa0610090:five_prime_UTR
AACATGCAAAAGATAAAGAA+GGG 0.575926 4_2:-57726892 None:intergenic
GCTCAATCCAATCGCTCCGA+GGG 0.577405 4_2:+57728005 Msa0610090:CDS
AGCTTGGGCGGCTGATTCGG+AGG 0.578951 4_2:+57727053 Msa0610090:CDS
TGAATCTAAGGCAGATGGAG+TGG 0.579010 4_2:+57727614 Msa0610090:CDS
GACGACCGGAATCAAACGAC+GGG 0.580045 4_2:-57727533 None:intergenic
CCATAAGATCTAACAGGAAG+CGG 0.580778 4_2:-57727660 None:intergenic
TGAACCGTCCAGGGCTGACG+AGG 0.581118 4_2:+57727479 Msa0610090:CDS
ATCTCCTCCGGTGTCAAACG+AGG 0.582913 4_2:-57727246 None:intergenic
AATCGCTCCGAGGGTCAAGA+TGG 0.583358 4_2:+57728014 Msa0610090:CDS
CGGCTCCATTAACGGAGCCC+CGG 0.583647 4_2:+57726925 Msa0610090:five_prime_UTR
TTCGCGTTCTTCGGCTTCGG+CGG 0.584811 4_2:-57727076 None:intergenic
ACCCAAAGAATTACCAGAAG+GGG 0.586030 4_2:-57733720 None:intergenic
ATTTGGTGCAGCGAGGCCTA+GGG 0.586725 4_2:+57727875 Msa0610090:CDS
TCCACCTCGTCAGCCCTGGA+CGG 0.589159 4_2:-57727483 None:intergenic
TTTCTGATAGGCCACCATCT+CGG 0.589671 4_2:+57733107 Msa0610090:CDS
AAAAGAATGAGATTAAAGAG+AGG 0.591664 4_2:-57726820 None:intergenic
TGGAATGGAACCAGATCGGT+GGG 0.595246 4_2:+57727698 Msa0610090:CDS
AAGACAATTTCAAGGTAGCA+AGG 0.599199 4_2:+57733225 Msa0610090:CDS
GAACTTTATCATCCAAATCA+CGG 0.600280 4_2:-57733027 None:intergenic
ACCGTCCAGGGCTGACGAGG+TGG 0.601252 4_2:+57727482 Msa0610090:CDS
CTGTGCCACGGGATCGAGGT+CGG 0.601837 4_2:-57733171 None:intergenic
GCAAAAGATAAAGAAGGGAA+GGG 0.602416 4_2:-57726887 None:intergenic
GAACCAGATCGGTGGGCCAG+AGG 0.608417 4_2:+57727705 Msa0610090:CDS
GAACCAGATCGGTGGGCTAG+AGG 0.608627 4_2:+57727738 Msa0610090:CDS
AATGCGAAAGGGAATGCGAA+TGG 0.608798 4_2:-57726854 None:intergenic
ATTGTCTTCTGTCATCAGTA+GGG 0.609039 4_2:-57733210 None:intergenic
GGGCAATATCGGAGCTTGGG+CGG 0.612360 4_2:+57727041 Msa0610090:CDS
TCAAATGAGCCAGACCGAGA+TGG 0.613829 4_2:-57733121 None:intergenic
CTGGAATGGAACCAGATCGG+TGG 0.613892 4_2:+57727697 Msa0610090:CDS
CACCCAAAGAATTACCAGAA+GGG 0.616792 4_2:-57733721 None:intergenic
CAAAAGATAAAGAAGGGAAG+GGG 0.616891 4_2:-57726886 None:intergenic
TGGTTCTCGTGATTCTGGAA+TGG 0.620802 4_2:+57727683 Msa0610090:CDS
TCGACATATCACCTGTGCCA+CGG 0.621711 4_2:-57733183 None:intergenic
TCAAATGAGGAATCTGCAGA+TGG 0.621742 4_2:+57732935 Msa0610090:CDS
CTCTCTGAATTCACACGTGG+AGG 0.621888 4_2:+57727192 Msa0610090:CDS
CAAGCTCCGATATTGCCCCA+GGG 0.622182 4_2:-57727036 None:intergenic
TGGTGCAGCGAGGCCTAGGG+AGG 0.622918 4_2:+57727878 Msa0610090:CDS
GATCAGAATTAACCTATCAA+CGG 0.623107 4_2:-57728153 None:intergenic
GGTGGTGAATCTAAGGCAGA+TGG 0.624412 4_2:+57727609 Msa0610090:CDS
CTTCCTGTTAGATCTTATGG+TGG 0.624740 4_2:+57727663 Msa0610090:CDS
ATTTGAGCAGATGCAAAACA+GGG 0.625534 4_2:-57733851 None:intergenic
GAATCTGCAGATGGTGCTGG+TGG 0.625899 4_2:+57732944 Msa0610090:CDS
GGTGGTTTCTCTTCCTATGG+CGG 0.626377 4_2:+57727333 Msa0610090:CDS
ACGGACCGACCTCGATCCCG+TGG 0.627001 4_2:+57733166 Msa0610090:CDS
GGTCAAGTTCCAAAGAGAGA+TGG 0.627584 4_2:+57733503 Msa0610090:intron
AAGAGAAACCACCGCCAAGA+CGG 0.628351 4_2:-57727323 None:intergenic
CGAGGTGGATAATTGGGCGT+CGG 0.628407 4_2:+57727497 Msa0610090:CDS
TCCTAAGGAACGTTCTGCTG+AGG 0.630026 4_2:+57727287 Msa0610090:CDS
TTTCAAGGTAGCAAGGATAG+GGG 0.630195 4_2:+57733232 Msa0610090:CDS
GTTCTGCTGTGGAACCAGAT+CGG 0.630379 4_2:+57727727 Msa0610090:CDS
TTCAAGGTAGCAAGGATAGG+GGG 0.630758 4_2:+57733233 Msa0610090:CDS
AATCGATATGGTGGTAGTGG+TGG 0.632759 4_2:+57727570 Msa0610090:CDS
AATGAGCCAGACCGAGATGG+TGG 0.632763 4_2:-57733118 None:intergenic
GGTCGTGGAAGGGATCGTGA+GGG 0.633323 4_2:+57727363 Msa0610090:CDS
TCACCTGTGCCACGGGATCG+AGG 0.634702 4_2:-57733175 None:intergenic
GTGGGCCAGAGGTTCTGCTG+TGG 0.635102 4_2:+57727716 Msa0610090:CDS
ATCAGCGGCGCCACCACCGG+AGG 0.637808 4_2:-57727220 None:intergenic
CAGAATCAGAATCGATATGG+TGG 0.641276 4_2:+57727561 Msa0610090:CDS
TTCTGTCAATGAATCTCTGG+TGG 0.641833 4_2:+57727830 Msa0610090:CDS
AATGCTACTAGAGAAAGAAA+GGG 0.643049 4_2:+57732988 Msa0610090:CDS
GCCCCAAGAACCATCACCAG+AGG 0.646418 4_2:-57727388 None:intergenic
TGCTCAATCCAATCGCTCCG+AGG 0.647671 4_2:+57728004 Msa0610090:CDS
AGACAACTTCCCTAGTCTCA+AGG 0.647880 4_2:+57727128 Msa0610090:CDS
TGATATCCCTCGTTTGACAC+CGG 0.647894 4_2:+57727239 Msa0610090:CDS
AGGGAAGTTGTCTGACGGAG+CGG 0.647971 4_2:-57727118 None:intergenic
GAACGTTCCTTAGGACCGGT+AGG 0.649208 4_2:-57727279 None:intergenic
CGTGGAGGTTACTCCTCCGG+TGG 0.650334 4_2:+57727207 Msa0610090:CDS
ACACCCAAAGAATTACCAGA+AGG 0.654355 4_2:-57733722 None:intergenic
AGACTAGGGAAGTTGTCTGA+CGG 0.654960 4_2:-57727123 None:intergenic
GAGGATCGATTGGTCACGCG+CGG 0.656205 4_2:-57726801 None:intergenic
AAAATGTGGTTGTTGAGCCG+GGG 0.656326 4_2:-57726942 None:intergenic
ATTCTGGAATGGAACCAGAT+CGG 0.658547 4_2:+57727694 Msa0610090:CDS
TATCCCTCGTTTGACACCGG+AGG 0.661145 4_2:+57727242 Msa0610090:CDS
TCTCCTCCGGTGTCAAACGA+GGG 0.667734 4_2:-57727245 None:intergenic
TGGAGATGCCAAACCCAGGG+AGG 0.669816 4_2:+57728070 Msa0610090:CDS
CGAAGCGGCAGCTAAGTCAG+CGG 0.671050 4_2:+57727095 Msa0610090:CDS
GAAAGGGAATGCGAATGGAG+AGG 0.674800 4_2:-57726849 None:intergenic
CGAATCCATTTGGTGCAGCG+AGG 0.679245 4_2:+57727868 Msa0610090:CDS
TCGCTCTCTGAATTCACACG+TGG 0.684890 4_2:+57727189 Msa0610090:CDS
TTGAGCAGATGCAAAACAGG+GGG 0.686216 4_2:-57733849 None:intergenic
TCGAAAATGTCGAAACCCTG+GGG 0.688784 4_2:+57727021 Msa0610090:exon
AGATGGAGTGGATAATTGGG+CGG 0.692662 4_2:+57727626 Msa0610090:CDS
TGACGACCGGAATCAAACGA+CGG 0.701239 4_2:-57727534 None:intergenic
TGTTGCTGCTCCGTATCACG+CGG 0.719824 4_2:-57727765 None:intergenic
TTTGAGCAGATGCAAAACAG+GGG 0.727028 4_2:-57733850 None:intergenic
TTTCAGGCCTGAGACCATGG+AGG 0.728930 4_2:+57732847 Msa0610090:intron
GCTGGAAGAAGATCTTATGG+TGG 0.751047 4_2:+57727411 Msa0610090:CDS
TGTCAAACGAGGGATATCAG+CGG 0.753007 4_2:-57727235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTCATTTTTTTTTTTTTTT+TGG + chr4_2:57729715-57729734 Msa0610090:intron 10.0%
!!! GTCATTTTTTTTTTTTTTTT+GGG + chr4_2:57729716-57729735 Msa0610090:intron 10.0%
!!! TCATTTTTTTTTTTTTTTTG+GGG + chr4_2:57729717-57729736 Msa0610090:intron 10.0%
!! AACCAATAATAATTATATTA+TGG + chr4_2:57730100-57730119 Msa0610090:intron 10.0%
!! TGTTCAAAAAAAATATATTA+TGG + chr4_2:57730130-57730149 Msa0610090:intron 10.0%
!! AAAAATAAATAAATAAACAG+AGG - chr4_2:57732178-57732197 None:intergenic 10.0%
!!! TAATTTCTAGTATAATAAAT+AGG + chr4_2:57732472-57732491 Msa0610090:intron 10.0%
!! TTAAATAACGAAAAATTAAA+AGG - chr4_2:57732557-57732576 None:intergenic 10.0%
!!! AATTGATTTCTATAATTTAG+AGG + chr4_2:57728538-57728557 Msa0610090:intron 15.0%
!! TAGATAATTTAGTTATAGAT+AGG + chr4_2:57729437-57729456 Msa0610090:intron 15.0%
!! AGATAATTTAGTTATAGATA+GGG + chr4_2:57729438-57729457 Msa0610090:intron 15.0%
!!! TATATTATTGATTTGTTTGA+AGG + chr4_2:57729606-57729625 Msa0610090:intron 15.0%
!! CACCATAATATAATTATTAT+TGG - chr4_2:57730105-57730124 None:intergenic 15.0%
!!! ATTGATGTTTTAAAAAAAGT+TGG + chr4_2:57730292-57730311 Msa0610090:intron 15.0%
!!! TTTGTTAAGTCTTAATATTT+TGG + chr4_2:57730935-57730954 Msa0610090:intron 15.0%
!!! TTGTTTATATTCATTTTACT+TGG + chr4_2:57732715-57732734 Msa0610090:intron 15.0%
!! TACAAGTAATAAATAGTATT+AGG - chr4_2:57733583-57733602 None:intergenic 15.0%
!!! AACTATTTAAGTTCCTTTTA+TGG + chr4_2:57728221-57728240 Msa0610090:intron 20.0%
!! GAAAAAGACTACAAAATAAT+TGG - chr4_2:57728768-57728787 None:intergenic 20.0%
!!! ATACATAATACTTTTAAGAG+TGG + chr4_2:57728968-57728987 Msa0610090:intron 20.0%
!!! GTATTGATAATTAACAAACT+AGG - chr4_2:57729021-57729040 None:intergenic 20.0%
!!! ATGCTTTTTTAATCAAAACT+TGG + chr4_2:57729072-57729091 Msa0610090:intron 20.0%
!!! ATTGTAACCATTCTAAAATA+GGG - chr4_2:57729202-57729221 None:intergenic 20.0%
!! ATATATAATTCACTGTTGAA+CGG + chr4_2:57729230-57729249 Msa0610090:intron 20.0%
!! ACGTTTATATTATTAACTCT+TGG - chr4_2:57729280-57729299 None:intergenic 20.0%
!! AGTTTGATCTATGATTTAAA+TGG - chr4_2:57729309-57729328 None:intergenic 20.0%
!! TGATTTCAATAATTAATCCA+TGG - chr4_2:57729356-57729375 None:intergenic 20.0%
!! TCAAATGTGAAGATAAAAAA+AGG + chr4_2:57729373-57729392 Msa0610090:intron 20.0%
!! ATCATTGCAATTTATAAATC+TGG + chr4_2:57729549-57729568 Msa0610090:intron 20.0%
!!! GAAACTATTTATTGTTATTG+TGG + chr4_2:57730161-57730180 Msa0610090:intron 20.0%
!!! TAGAAATAAAGTCTTATAGT+AGG + chr4_2:57730197-57730216 Msa0610090:intron 20.0%
!!! TAAAACATCAATCCTTTTAT+GGG - chr4_2:57730284-57730303 None:intergenic 20.0%
!!! TTAAAACATCAATCCTTTTA+TGG - chr4_2:57730285-57730304 None:intergenic 20.0%
!! TTGACATGAACAAAAAAATT+TGG + chr4_2:57730836-57730855 Msa0610090:intron 20.0%
!!! GTTGTTAAGTCTTAATATTT+TGG + chr4_2:57730858-57730877 Msa0610090:intron 20.0%
!! TTGACATGAACAAAAAAATT+TGG + chr4_2:57730836-57730855 Msa0610090:intron 20.0%
!! TATATTCCTACCAAATAATT+AGG - chr4_2:57730994-57731013 None:intergenic 20.0%
!! ATACAAGTAATCTGAAAAAA+AGG - chr4_2:57731085-57731104 None:intergenic 20.0%
!!! AATTATCATGCACTATATTT+TGG + chr4_2:57731449-57731468 Msa0610090:intron 20.0%
!!! ATTATCATGCACTATATTTT+GGG + chr4_2:57731450-57731469 Msa0610090:intron 20.0%
!! TGAACTTTGATTATTAGTTA+TGG + chr4_2:57732256-57732275 Msa0610090:intron 20.0%
!!! ATAATTTGGGTTAATCAATT+AGG + chr4_2:57732757-57732776 Msa0610090:intron 20.0%
!!! TTTTAATAATTTTTCCTCCA+TGG - chr4_2:57732864-57732883 None:intergenic 20.0%
!!! TTTTGTCCTAATAAAATTAC+AGG - chr4_2:57733766-57733785 None:intergenic 20.0%
!! CAAAACTTAATTGAAGATTA+TGG + chr4_2:57733781-57733800 Msa0610090:three_prime_UTR 20.0%
! AAAAGAATGAGATTAAAGAG+AGG - chr4_2:57726823-57726842 None:intergenic 25.0%
! AACATGCAAAAGATAAAGAA+GGG - chr4_2:57726895-57726914 None:intergenic 25.0%
! AAAATTGAAGAGAATGAGAT+TGG - chr4_2:57726992-57727011 None:intergenic 25.0%
! TTAATTGAACACACCATAAA+AGG - chr4_2:57728237-57728256 None:intergenic 25.0%
! TGTTCAATTAATTAGAGTCA+TGG + chr4_2:57728246-57728265 Msa0610090:intron 25.0%
! GTTCAATTAATTAGAGTCAT+GGG + chr4_2:57728247-57728266 Msa0610090:intron 25.0%
! TAATGTCTTAACTTTATAGC+AGG + chr4_2:57728329-57728348 Msa0610090:intron 25.0%
! TATTAAACACTAGTTGGATA+TGG + chr4_2:57728577-57728596 Msa0610090:intron 25.0%
! TCATTAAGTGTTATGTATGT+TGG + chr4_2:57728687-57728706 Msa0610090:intron 25.0%
!!! TTTCAGTTATTTTGGAGATT+AGG + chr4_2:57728729-57728748 Msa0610090:intron 25.0%
!! GTAATTTGTCATAGGAATAT+AGG + chr4_2:57728895-57728914 Msa0610090:intron 25.0%
!!! CATTGTAACCATTCTAAAAT+AGG - chr4_2:57729203-57729222 None:intergenic 25.0%
!! TTTAGAATGGTTACAATGAA+AGG + chr4_2:57729205-57729224 Msa0610090:intron 25.0%
! TTAGAATGGTTACAATGAAA+GGG + chr4_2:57729206-57729225 Msa0610090:intron 25.0%
! AATGTGAAGATAAAAAAAGG+TGG + chr4_2:57729376-57729395 Msa0610090:intron 25.0%
! TTTGTTTGAAGGTAATTTCA+TGG + chr4_2:57729617-57729636 Msa0610090:intron 25.0%
! AAAATGGTTGTAACTTCAAA+AGG + chr4_2:57729818-57729837 Msa0610090:intron 25.0%
! AAATGGTTGTAACTTCAAAA+GGG + chr4_2:57729819-57729838 Msa0610090:intron 25.0%
!!! TTTTTGAGCATGAAAATATG+AGG + chr4_2:57730037-57730056 Msa0610090:intron 25.0%
! TCTTATAGTAGGATTATAGA+TGG + chr4_2:57730208-57730227 Msa0610090:intron 25.0%
! ATAAACATGCACTAAGATAT+TGG - chr4_2:57730440-57730459 None:intergenic 25.0%
! AGTTAGAATTCCAATTCTAA+TGG + chr4_2:57730569-57730588 Msa0610090:intron 25.0%
! ATTCCAATTCTAATGGAATT+CGG + chr4_2:57730576-57730595 Msa0610090:intron 25.0%
! TTCAGAAAATGAAAATCAAC+AGG - chr4_2:57730812-57730831 None:intergenic 25.0%
!!! AGTCTTAATATTTTGGACTT+TGG + chr4_2:57730865-57730884 Msa0610090:intron 25.0%
!!! AGTCTTAATATTTTGGACTT+TGG + chr4_2:57730865-57730884 Msa0610090:intron 25.0%
! TTGTACCAAATTAGTTATGT+CGG + chr4_2:57731030-57731049 Msa0610090:intron 25.0%
! ATAAGCATAAATCTATAGTC+TGG - chr4_2:57731209-57731228 None:intergenic 25.0%
!! AATATTACAGGCTTCTAAAA+AGG - chr4_2:57731245-57731264 None:intergenic 25.0%
! TCATAAGCAGATTTAAAAAG+AGG - chr4_2:57731610-57731629 None:intergenic 25.0%
!!! ATTCAGTTTTGACTTTGTTT+TGG + chr4_2:57731652-57731671 Msa0610090:intron 25.0%
!!! ATTTTGGTACAGATCTATTT+GGG + chr4_2:57731815-57731834 Msa0610090:intron 25.0%
!! TTTGGGATTAGAAATAAGTT+TGG + chr4_2:57731832-57731851 Msa0610090:intron 25.0%
! AGAAAATTCAAAGGTTTCTA+GGG + chr4_2:57731876-57731895 Msa0610090:intron 25.0%
! TTAAATACTTTGGTTGAGTT+GGG + chr4_2:57731935-57731954 Msa0610090:intron 25.0%
!! TAAACTAATTTGCGTCATAT+TGG + chr4_2:57732214-57732233 Msa0610090:intron 25.0%
!! AAACTAATTTGCGTCATATT+GGG + chr4_2:57732215-57732234 Msa0610090:intron 25.0%
!! TGTTATAGCTTAATTTTGCA+GGG + chr4_2:57732392-57732411 Msa0610090:intron 25.0%
! AGGGAAATACTACATTATTA+GGG + chr4_2:57732411-57732430 Msa0610090:intron 25.0%
!!! GTTTTAGTGTTAATTGCTTT+GGG + chr4_2:57732433-57732452 Msa0610090:intron 25.0%
! TAATAAATAGTATTAGGCTC+TGG - chr4_2:57733577-57733596 None:intergenic 25.0%
!! AGAAAGCCTGTAATTTTATT+AGG + chr4_2:57733757-57733776 Msa0610090:three_prime_UTR 25.0%
! TAATTGAAGATTATGGAACT+TGG + chr4_2:57733788-57733807 Msa0610090:three_prime_UTR 25.0%
GAACATGCAAAAGATAAAGA+AGG - chr4_2:57726896-57726915 None:intergenic 30.0%
! CTTTATCTTTTGCATGTTCT+CGG + chr4_2:57726897-57726916 Msa0610090:five_prime_UTR 30.0%
GACATCTTCTTATTCTTCTT+CGG - chr4_2:57727171-57727190 None:intergenic 30.0%
AATCAGAATCAGAATCGATA+TGG + chr4_2:57727558-57727577 Msa0610090:CDS 30.0%
GATCAGAATTAACCTATCAA+CGG - chr4_2:57728156-57728175 None:intergenic 30.0%
AATAGTATAGGTGAATCAGA+TGG + chr4_2:57728276-57728295 Msa0610090:intron 30.0%
ATAGTATAGGTGAATCAGAT+GGG + chr4_2:57728277-57728296 Msa0610090:intron 30.0%
! ATGAGTTTGAGTATCGTTAT+CGG + chr4_2:57728360-57728379 Msa0610090:intron 30.0%
TGATGGTTTCTTATTCTATC+AGG + chr4_2:57728383-57728402 Msa0610090:intron 30.0%
GATGGTTTCTTATTCTATCA+GGG + chr4_2:57728384-57728403 Msa0610090:intron 30.0%
ATGGTTTCTTATTCTATCAG+GGG + chr4_2:57728385-57728404 Msa0610090:intron 30.0%
ATAGTGGTTAGCAAAACATA+AGG + chr4_2:57728502-57728521 Msa0610090:intron 30.0%
GTGTTTAATAGCTCAATAAC+TGG - chr4_2:57728567-57728586 None:intergenic 30.0%
TTGAGCTATTAAACACTAGT+TGG + chr4_2:57728571-57728590 Msa0610090:intron 30.0%
AGTGTTATGTATGTTGGATA+TGG + chr4_2:57728693-57728712 Msa0610090:intron 30.0%
!!! AGTTATTTTGGAGATTAGGT+TGG + chr4_2:57728733-57728752 Msa0610090:intron 30.0%
!! GTAGTCTTTTTCACTTCATA+TGG + chr4_2:57728776-57728795 Msa0610090:intron 30.0%
ATAGGAATATAGGATAGTTG+TGG + chr4_2:57728905-57728924 Msa0610090:intron 30.0%
AATTAACAAACTAGGTCACA+AGG - chr4_2:57729013-57729032 None:intergenic 30.0%
AAAAAAAGGTGGATAAGTTG+TGG + chr4_2:57729387-57729406 Msa0610090:intron 30.0%
CCTAGTTGTATAACATACTT+GGG - chr4_2:57729664-57729683 None:intergenic 30.0%
CCAAGTATGTTATACAACTA+GGG + chr4_2:57729662-57729681 Msa0610090:intron 30.0%
CAAGTATGTTATACAACTAG+GGG + chr4_2:57729663-57729682 Msa0610090:intron 30.0%
GATTTCTTTCATCAACTGAA+TGG + chr4_2:57729906-57729925 Msa0610090:intron 30.0%
! TCTACTAGTTTAGAGCAAAA+AGG - chr4_2:57729968-57729987 None:intergenic 30.0%
ACTAGTAGAACAACTTTGTA+AGG + chr4_2:57729979-57729998 Msa0610090:intron 30.0%
!!! TACCTACTTTTTGTATGTAG+TGG + chr4_2:57730009-57730028 Msa0610090:intron 30.0%
ATCCACTACATACAAAAAGT+AGG - chr4_2:57730014-57730033 None:intergenic 30.0%
!!! ATTTTCATTTCAAGTTCAGC+AGG + chr4_2:57730063-57730082 Msa0610090:intron 30.0%
!!! TTTTCATTTCAAGTTCAGCA+GGG + chr4_2:57730064-57730083 Msa0610090:intron 30.0%
TTGAATTTAGCAGAAACAGA+GGG - chr4_2:57730478-57730497 None:intergenic 30.0%
TTCCTCTTAGAGAATATGTT+AGG + chr4_2:57730502-57730521 Msa0610090:intron 30.0%
TACCTAACATATTCTCTAAG+AGG - chr4_2:57730507-57730526 None:intergenic 30.0%
AATATGTTAGGTAAGCCAAA+TGG + chr4_2:57730514-57730533 Msa0610090:intron 30.0%
GGTTGACAATGATTTATCTT+TGG + chr4_2:57730650-57730669 Msa0610090:intron 30.0%
ACAATGATTTATCTTTGGTC+TGG + chr4_2:57730655-57730674 Msa0610090:intron 30.0%
! CATTTTTATCTTGTCAGTCA+GGG + chr4_2:57730752-57730771 Msa0610090:intron 30.0%
TGACGATTGAAATAGTTGAT+AGG + chr4_2:57730781-57730800 Msa0610090:intron 30.0%
! GACGATTGAAATAGTTGATA+GGG + chr4_2:57730782-57730801 Msa0610090:intron 30.0%
CAAATAATTAGGACAAGTAC+TGG - chr4_2:57730983-57731002 None:intergenic 30.0%
CAGTACTTGTCCTAATTATT+TGG + chr4_2:57730981-57731000 Msa0610090:intron 30.0%
ACTTGTCCTAATTATTTGGT+AGG + chr4_2:57730985-57731004 Msa0610090:intron 30.0%
AGTATCCGACATAACTAATT+TGG - chr4_2:57731038-57731057 None:intergenic 30.0%
ATGTTGGAATCATAGGATAA+GGG - chr4_2:57731136-57731155 None:intergenic 30.0%
! CTTCTAAAAAGGAAAGGAAA+GGG - chr4_2:57731234-57731253 None:intergenic 30.0%
GTCACAACAAACAATATTAC+AGG - chr4_2:57731257-57731276 None:intergenic 30.0%
!! TAATATTGTTTGTTGTGACC+TGG + chr4_2:57731258-57731277 Msa0610090:intron 30.0%
!! AATATTGTTTGTTGTGACCT+GGG + chr4_2:57731259-57731278 Msa0610090:intron 30.0%
!! TGAAGATTGCAATCTAGTTT+TGG + chr4_2:57731354-57731373 Msa0610090:intron 30.0%
TCAATATGTTTGGCTGTATT+TGG + chr4_2:57731516-57731535 Msa0610090:intron 30.0%
AAGCAGATTTAAAAAGAGGT+TGG - chr4_2:57731606-57731625 None:intergenic 30.0%
AAGTCAAAACTGAATAGAGA+AGG - chr4_2:57731647-57731666 None:intergenic 30.0%
ATCATCAATCTCAAATCCTT+TGG - chr4_2:57731797-57731816 None:intergenic 30.0%
!! GGATTTGAGATTGATGATTT+TGG + chr4_2:57731799-57731818 Msa0610090:intron 30.0%
!! GATTTTGGTACAGATCTATT+TGG + chr4_2:57731814-57731833 Msa0610090:intron 30.0%
! AACCTTTGAATTTTCTCCTT+TGG - chr4_2:57731872-57731891 None:intergenic 30.0%
GAGAAAATTCAAAGGTTTCT+AGG + chr4_2:57731875-57731894 Msa0610090:intron 30.0%
!!! GGGTGTATGTTTTGATATTT+AGG + chr4_2:57731896-57731915 Msa0610090:intron 30.0%
! ACTAGTAGCCTTAAATACTT+TGG + chr4_2:57731925-57731944 Msa0610090:intron 30.0%
! CAACTCAACCAAAGTATTTA+AGG - chr4_2:57731936-57731955 None:intergenic 30.0%
CTTAAATACTTTGGTTGAGT+TGG + chr4_2:57731934-57731953 Msa0610090:intron 30.0%
! CTTTTATGTGTATGATAGCA+TGG + chr4_2:57732314-57732333 Msa0610090:intron 30.0%
CAAAATTAAGCTATAACAGG+TGG - chr4_2:57732390-57732409 None:intergenic 30.0%
CTGCAAAATTAAGCTATAAC+AGG - chr4_2:57732393-57732412 None:intergenic 30.0%
! CTGTTATAGCTTAATTTTGC+AGG + chr4_2:57732391-57732410 Msa0610090:intron 30.0%
CAGGGAAATACTACATTATT+AGG + chr4_2:57732410-57732429 Msa0610090:intron 30.0%
!! GGTTTTAGTGTTAATTGCTT+TGG + chr4_2:57732432-57732451 Msa0610090:intron 30.0%
ATCATTTACTCCCAATAGTT+TGG + chr4_2:57732653-57732672 Msa0610090:intron 30.0%
GATCACATTTATATAGCAAG+AGG - chr4_2:57732689-57732708 None:intergenic 30.0%
! CTTGCTATATAAATGTGATC+TGG + chr4_2:57732689-57732708 Msa0610090:intron 30.0%
ACAACATTGCAGCATAATTT+GGG + chr4_2:57732744-57732763 Msa0610090:intron 30.0%
AAGTAACTTCAAAGTCAACA+AGG - chr4_2:57732828-57732847 None:intergenic 30.0%
!!! TGACTTTGAAGTTACTTTTC+AGG + chr4_2:57732831-57732850 Msa0610090:intron 30.0%
TCCTCATTTGAATTAACTGT+AGG - chr4_2:57732926-57732945 None:intergenic 30.0%
AATGCTACTAGAGAAAGAAA+GGG + chr4_2:57732988-57733007 Msa0610090:CDS 30.0%
GAACTTTATCATCCAAATCA+CGG - chr4_2:57733030-57733049 None:intergenic 30.0%
! TTGGATGATAAAGTTCGTTT+TGG + chr4_2:57733034-57733053 Msa0610090:CDS 30.0%
! TGGATGATAAAGTTCGTTTT+GGG + chr4_2:57733035-57733054 Msa0610090:CDS 30.0%
!! TTCAAGAAGTGTGGATTTTA+CGG + chr4_2:57733147-57733166 Msa0610090:CDS 30.0%
AGCATTAACAAACAGTTATC+GGG - chr4_2:57733465-57733484 None:intergenic 30.0%
CAGCATTAACAAACAGTTAT+CGG - chr4_2:57733466-57733485 None:intergenic 30.0%
ACTCTTAATCCACAAAAAAC+TGG - chr4_2:57733535-57733554 None:intergenic 30.0%
TTGAGATGCAATAACAGATT+AGG - chr4_2:57733680-57733699 None:intergenic 30.0%
!! TAAATTTGATTTTCCCCTTC+TGG + chr4_2:57733707-57733726 Msa0610090:three_prime_UTR 30.0%
AGATTAAAGAGAGGATCGAT+TGG - chr4_2:57726814-57726833 None:intergenic 35.0%
CAAAAGATAAAGAAGGGAAG+GGG - chr4_2:57726889-57726908 None:intergenic 35.0%
GCAAAAGATAAAGAAGGGAA+GGG - chr4_2:57726890-57726909 None:intergenic 35.0%
TGCAAAAGATAAAGAAGGGA+AGG - chr4_2:57726891-57726910 None:intergenic 35.0%
! GTGTTGTTGTGTTGAAAATG+TGG - chr4_2:57726959-57726978 None:intergenic 35.0%
CTTCTTATTCTTCTTCGGTT+TGG - chr4_2:57727166-57727185 None:intergenic 35.0%
! TCTCCAAAAGGATTCACTTT+TGG - chr4_2:57728056-57728075 None:intergenic 35.0%
!! CATGGGAGCATTAATAGTAT+AGG + chr4_2:57728264-57728283 Msa0610090:intron 35.0%
TGTGTATCTGAGAGCTAATT+GGG + chr4_2:57728471-57728490 Msa0610090:intron 35.0%
ACTAGTTGGATATGGAAATC+AGG + chr4_2:57728585-57728604 Msa0610090:intron 35.0%
!!! AGGCGCTTTTTCAGTTATTT+TGG + chr4_2:57728721-57728740 Msa0610090:intron 35.0%
! ATGGTTTTCTGTGTAATGCT+TGG + chr4_2:57728795-57728814 Msa0610090:intron 35.0%
! ACCTCGGCTTTGTAAATTTA+GGG - chr4_2:57728874-57728893 None:intergenic 35.0%
! AACCTCGGCTTTGTAAATTT+AGG - chr4_2:57728875-57728894 None:intergenic 35.0%
CCTATGACAAATTACAACCT+CGG - chr4_2:57728890-57728909 None:intergenic 35.0%
GAGATTCGAGAGAATACAAA+TGG + chr4_2:57729129-57729148 Msa0610090:intron 35.0%
ATTAATCAGCATAGCGTACA+TGG + chr4_2:57729168-57729187 Msa0610090:intron 35.0%
!! AACAGCTCCCTATTTTAGAA+TGG + chr4_2:57729192-57729211 Msa0610090:intron 35.0%
TCATAGATCAAACTCCAAGA+AGG + chr4_2:57729315-57729334 Msa0610090:intron 35.0%
!! CAGATATGTTTGAGTTGAAG+AGG + chr4_2:57729477-57729496 Msa0610090:intron 35.0%
TAATTTCATGGCATTCACGA+TGG + chr4_2:57729629-57729648 Msa0610090:intron 35.0%
CCCAAGTATGTTATACAACT+AGG + chr4_2:57729661-57729680 Msa0610090:intron 35.0%
CCCTAGTTGTATAACATACT+TGG - chr4_2:57729665-57729684 None:intergenic 35.0%
! TTATACAACTAGGGGTTTTG+TGG + chr4_2:57729671-57729690 Msa0610090:intron 35.0%
!! TATACAACTAGGGGTTTTGT+GGG + chr4_2:57729672-57729691 Msa0610090:intron 35.0%
! AGTCAAAGAAGCATGTGAAA+TGG + chr4_2:57729940-57729959 Msa0610090:intron 35.0%
!! TTTCATTTCAAGTTCAGCAG+GGG + chr4_2:57730065-57730084 Msa0610090:intron 35.0%
AGTGTTATCATGCCCATAAA+AGG + chr4_2:57730269-57730288 Msa0610090:intron 35.0%
TTGTATTTGTATGATGCCTG+AGG + chr4_2:57730341-57730360 Msa0610090:intron 35.0%
TGTATTTGTATGATGCCTGA+GGG + chr4_2:57730342-57730361 Msa0610090:intron 35.0%
ACCCATACTCATGTTATTGT+TGG + chr4_2:57730392-57730411 Msa0610090:intron 35.0%
CCCAACAATAACATGAGTAT+GGG - chr4_2:57730396-57730415 None:intergenic 35.0%
CCCATACTCATGTTATTGTT+GGG + chr4_2:57730393-57730412 Msa0610090:intron 35.0%
ACCCAACAATAACATGAGTA+TGG - chr4_2:57730397-57730416 None:intergenic 35.0%
CTTGAATTTAGCAGAAACAG+AGG - chr4_2:57730479-57730498 None:intergenic 35.0%
!! CTCTGTTTCTGCTAAATTCA+AGG + chr4_2:57730477-57730496 Msa0610090:intron 35.0%
CTAACAGAACACATTCCATT+TGG - chr4_2:57730532-57730551 None:intergenic 35.0%
CTTCCGAATTCCATTAGAAT+TGG - chr4_2:57730582-57730601 None:intergenic 35.0%
TAATGGAATTCGGAAGACAT+AGG + chr4_2:57730586-57730605 Msa0610090:intron 35.0%
GACATAGGCCATAAAAAGAT+CGG + chr4_2:57730601-57730620 Msa0610090:intron 35.0%
ATCATTGTAGCTGATGATCA+AGG - chr4_2:57730718-57730737 None:intergenic 35.0%
! GCATTTTTATCTTGTCAGTC+AGG + chr4_2:57730751-57730770 Msa0610090:intron 35.0%
TTGGTAGGAATATATGTCGT+AGG + chr4_2:57731000-57731019 Msa0610090:intron 35.0%
TCATAGGATAAGGGTTACAA+AGG - chr4_2:57731127-57731146 None:intergenic 35.0%
GATGTTGGAATCATAGGATA+AGG - chr4_2:57731137-57731156 None:intergenic 35.0%
TATCTCGATGTTGGAATCAT+AGG - chr4_2:57731143-57731162 None:intergenic 35.0%
AAAACAATAGATCCTGCTGA+AGG - chr4_2:57731179-57731198 None:intergenic 35.0%
! GCTTCTAAAAAGGAAAGGAA+AGG - chr4_2:57731235-57731254 None:intergenic 35.0%
! TACAGGCTTCTAAAAAGGAA+AGG - chr4_2:57731240-57731259 None:intergenic 35.0%
!! ATATTGTTTGTTGTGACCTG+GGG + chr4_2:57731260-57731279 Msa0610090:intron 35.0%
AATCTTCAAGAACAATCCCA+GGG - chr4_2:57731342-57731361 None:intergenic 35.0%
GGAATTATGTTTCAGCCTTA+AGG + chr4_2:57731471-57731490 Msa0610090:intron 35.0%
AACTGAATAGAGAAGGTGAA+AGG - chr4_2:57731640-57731659 None:intergenic 35.0%
!!! TTGACTTTGTTTTGGTTCTG+TGG + chr4_2:57731660-57731679 Msa0610090:intron 35.0%
!!! AAGCTTTTGCTTGACTTGTT+TGG + chr4_2:57731688-57731707 Msa0610090:intron 35.0%
! AAAGCATCAAATAGCATCTC+AGG - chr4_2:57731720-57731739 None:intergenic 35.0%
!!! TTGCTATTTTTAGCTGCCAA+AGG + chr4_2:57731778-57731797 Msa0610090:intron 35.0%
GGGATTAGAAATAAGTTTGG+AGG + chr4_2:57731835-57731854 Msa0610090:intron 35.0%
AGAAATAAGTTTGGAGGTCA+AGG + chr4_2:57731841-57731860 Msa0610090:intron 35.0%
GAAATAAGTTTGGAGGTCAA+GGG + chr4_2:57731842-57731861 Msa0610090:intron 35.0%
AAATAAGTTTGGAGGTCAAG+GGG + chr4_2:57731843-57731862 Msa0610090:intron 35.0%
CTCCAAAGGAGAAAATTCAA+AGG + chr4_2:57731867-57731886 Msa0610090:intron 35.0%
GGTTATTTGTAATCCCTAGA+GGG + chr4_2:57731956-57731975 Msa0610090:intron 35.0%
! CAAAGTAATTGGCCTCTATT+TGG - chr4_2:57731990-57732009 None:intergenic 35.0%
GCTATGGAGTACAAAGTAAT+TGG - chr4_2:57732001-57732020 None:intergenic 35.0%
TGTTATAGTTGCGTACTTGA+AGG + chr4_2:57732024-57732043 Msa0610090:intron 35.0%
! AGGAAGTGAAACTAAGTTGA+GGG - chr4_2:57732158-57732177 None:intergenic 35.0%
GTCATATTGGGATTGCATAT+TGG + chr4_2:57732227-57732246 Msa0610090:intron 35.0%
CTATTAGCAATCTACCTGTT+GGG - chr4_2:57732590-57732609 None:intergenic 35.0%
ACTATTAGCAATCTACCTGT+TGG - chr4_2:57732591-57732610 None:intergenic 35.0%
TTGACCAAAGCCAAACTATT+GGG - chr4_2:57732666-57732685 None:intergenic 35.0%
CACAACATTGCAGCATAATT+TGG + chr4_2:57732743-57732762 Msa0610090:intron 35.0%
TTTGAAGAAGCAACTTGAGA+AGG + chr4_2:57732898-57732917 Msa0610090:CDS 35.0%
GCCTACAGTTAATTCAAATG+AGG + chr4_2:57732922-57732941 Msa0610090:CDS 35.0%
CAATGCTACTAGAGAAAGAA+AGG + chr4_2:57732987-57733006 Msa0610090:CDS 35.0%
ATTTGAGGATTCAAGAAGTG+TGG + chr4_2:57733138-57733157 Msa0610090:CDS 35.0%
ATTGTCTTCTGTCATCAGTA+GGG - chr4_2:57733213-57733232 None:intergenic 35.0%
AATTGTCTTCTGTCATCAGT+AGG - chr4_2:57733214-57733233 None:intergenic 35.0%
GATGACAGAAGACAATTTCA+AGG + chr4_2:57733217-57733236 Msa0610090:CDS 35.0%
AAGACAATTTCAAGGTAGCA+AGG + chr4_2:57733225-57733244 Msa0610090:CDS 35.0%
AATTTCAAGGTAGCAAGGAT+AGG + chr4_2:57733230-57733249 Msa0610090:CDS 35.0%
ATTTCAAGGTAGCAAGGATA+GGG + chr4_2:57733231-57733250 Msa0610090:CDS 35.0%
CGAATAGCAGAGATTTGAAT+AGG + chr4_2:57733263-57733282 Msa0610090:CDS 35.0%
!! TATTCTTGACTTGCCACTTA+TGG + chr4_2:57733324-57733343 Msa0610090:intron 35.0%
! ATGGTAAACTCTGCCTATTT+TGG + chr4_2:57733343-57733362 Msa0610090:intron 35.0%
CAACAGATCAAAGCCAAAAT+AGG - chr4_2:57733359-57733378 None:intergenic 35.0%
! AACATAGCCCCTTTTCATTT+TGG + chr4_2:57733439-57733458 Msa0610090:intron 35.0%
TTATCGGGCCAAAATGAAAA+GGG - chr4_2:57733450-57733469 None:intergenic 35.0%
!! CGTTTTGTTCAATTTACTCC+AGG + chr4_2:57733612-57733631 Msa0610090:three_prime_UTR 35.0%
GTTCAATTTACTCCAGGAAT+TGG + chr4_2:57733618-57733637 Msa0610090:three_prime_UTR 35.0%
TAGTTTCTTTCCCACATGCA+GGG + chr4_2:57726766-57726785 Msa0610090:five_prime_UTR 40.0%
TGAAAATGTGGTTGTTGAGC+CGG - chr4_2:57726947-57726966 None:intergenic 40.0%
!! CTTCTTCGGTTTGGTAGTTA+CGG - chr4_2:57727157-57727176 None:intergenic 40.0%
GAAATGCAGTTTAACCGTCT+TGG + chr4_2:57727309-57727328 Msa0610090:CDS 40.0%
AATTCCGAAACCCTAGAACT+TGG - chr4_2:57727459-57727478 None:intergenic 40.0%
CAGAATCAGAATCGATATGG+TGG + chr4_2:57727561-57727580 Msa0610090:CDS 40.0%
!!! TTTTGGTGGTGGTGAATCTA+AGG + chr4_2:57727602-57727621 Msa0610090:CDS 40.0%
CCATAAGATCTAACAGGAAG+CGG - chr4_2:57727663-57727682 None:intergenic 40.0%
CTTCCTGTTAGATCTTATGG+TGG + chr4_2:57727663-57727682 Msa0610090:CDS 40.0%
GAACCACCATAAGATCTAAC+AGG - chr4_2:57727669-57727688 None:intergenic 40.0%
!! ATTCTGGAATGGAACCAGAT+CGG + chr4_2:57727694-57727713 Msa0610090:CDS 40.0%
!!! TTGGTTTTGGATCCAAGGAA+AGG + chr4_2:57727801-57727820 Msa0610090:CDS 40.0%
! TGGTTCTGTCAATGAATCTC+TGG + chr4_2:57727827-57727846 Msa0610090:CDS 40.0%
TTCTGTCAATGAATCTCTGG+TGG + chr4_2:57727830-57727849 Msa0610090:CDS 40.0%
ACGAATAAGCCGAATCCATT+TGG + chr4_2:57727858-57727877 Msa0610090:CDS 40.0%
AGGATATGATTGGAAGAAGC+TGG + chr4_2:57727917-57727936 Msa0610090:CDS 40.0%
!! AAAGGATTCACTTTTGGCCT+CGG - chr4_2:57728050-57728069 None:intergenic 40.0%
! AGGCCAAAAGTGAATCCTTT+TGG + chr4_2:57728050-57728069 Msa0610090:CDS 40.0%
! TTGAGTATCGTTATCGGTGA+TGG + chr4_2:57728366-57728385 Msa0610090:intron 40.0%
! ATTAGCTCTCAGATACACAC+AGG - chr4_2:57728470-57728489 None:intergenic 40.0%
GTGTGTATCTGAGAGCTAAT+TGG + chr4_2:57728470-57728489 Msa0610090:intron 40.0%
GTGTATCTGAGAGCTAATTG+GGG + chr4_2:57728472-57728491 Msa0610090:intron 40.0%
TAATTGGGGATGTGACATAG+TGG + chr4_2:57728486-57728505 Msa0610090:intron 40.0%
GTATGTTGGATATGGAAGTC+AGG + chr4_2:57728701-57728720 Msa0610090:intron 40.0%
CTGTGTAATGCTTGGTAGAT+AGG + chr4_2:57728803-57728822 Msa0610090:intron 40.0%
GTAATGCTTGGTAGATAGGT+TGG + chr4_2:57728807-57728826 Msa0610090:intron 40.0%
ACCCTAAATTTACAAAGCCG+AGG + chr4_2:57728870-57728889 Msa0610090:intron 40.0%
! CCGAGGTTGTAATTTGTCAT+AGG + chr4_2:57728887-57728906 Msa0610090:intron 40.0%
TGGCACTTTAGTACAAGCAA+AGG + chr4_2:57728925-57728944 Msa0610090:intron 40.0%
GGCACTTTAGTACAAGCAAA+GGG + chr4_2:57728926-57728945 Msa0610090:intron 40.0%
! TTACCTCTTTCTAGCCTTCT+TGG - chr4_2:57729332-57729351 None:intergenic 40.0%
!! ATGTTTGAGTTGAAGAGGCA+AGG + chr4_2:57729482-57729501 Msa0610090:intron 40.0%
!! TGTTTGAGTTGAAGAGGCAA+GGG + chr4_2:57729483-57729502 Msa0610090:intron 40.0%
TTTGGGGAATTAGCATGTCA+TGG + chr4_2:57729733-57729752 Msa0610090:intron 40.0%
TTGGGGAATTAGCATGTCAT+GGG + chr4_2:57729734-57729753 Msa0610090:intron 40.0%
! ATTTTGTGTGCCCTAAGGTT+CGG - chr4_2:57729803-57729822 None:intergenic 40.0%
TTCAGCAGGGGTGATAAAAA+GGG + chr4_2:57730077-57730096 Msa0610090:intron 40.0%
TAGTACACGAGCAATCTTCT+AGG - chr4_2:57730245-57730264 None:intergenic 40.0%
GTATTTGTATGATGCCTGAG+GGG + chr4_2:57730343-57730362 Msa0610090:intron 40.0%
TATTTGTATGATGCCTGAGG+GGG + chr4_2:57730344-57730363 Msa0610090:intron 40.0%
GCAGAAACAGAGGGAATAAA+AGG - chr4_2:57730469-57730488 None:intergenic 40.0%
TAGGCCATAAAAAGATCGGT+AGG + chr4_2:57730605-57730624 Msa0610090:intron 40.0%
AGGCCATAAAAAGATCGGTA+GGG + chr4_2:57730606-57730625 Msa0610090:intron 40.0%
GAGACTTATGCTATTCTGCT+TGG + chr4_2:57730629-57730648 Msa0610090:intron 40.0%
AGGGTTACAAAGGAAAAGAG+AGG - chr4_2:57731117-57731136 None:intergenic 40.0%
CAATCTTCAAGAACAATCCC+AGG - chr4_2:57731343-57731362 None:intergenic 40.0%
!!! ATTGCAATCTAGTTTTGGCC+AGG + chr4_2:57731359-57731378 Msa0610090:intron 40.0%
!!! TAGTTTTGGCCAGGAAGTAT+GGG + chr4_2:57731368-57731387 Msa0610090:intron 40.0%
!! CCAGTTGAGTTGAAACCTTA+AGG - chr4_2:57731489-57731508 None:intergenic 40.0%
CCTTAAGGTTTCAACTCAAC+TGG + chr4_2:57731486-57731505 Msa0610090:intron 40.0%
TGGCCTGAGTTCAATATGTT+TGG + chr4_2:57731506-57731525 Msa0610090:intron 40.0%
CAGCCAAACATATTGAACTC+AGG - chr4_2:57731512-57731531 None:intergenic 40.0%
TGTTTGGCTGTATTTGGAAG+TGG + chr4_2:57731522-57731541 Msa0610090:intron 40.0%
TGTATTTGGAAGTGGAGTCT+GGG + chr4_2:57731530-57731549 Msa0610090:intron 40.0%
TGACAATGAAAGGTAGCAGT+TGG + chr4_2:57731557-57731576 Msa0610090:intron 40.0%
TGATGCTTTGCAGTAGTTTG+TGG + chr4_2:57731731-57731750 Msa0610090:intron 40.0%
! GATGCTTTGCAGTAGTTTGT+GGG + chr4_2:57731732-57731751 Msa0610090:intron 40.0%
! ATGCTTTGCAGTAGTTTGTG+GGG + chr4_2:57731733-57731752 Msa0610090:intron 40.0%
GGGTTATTTGTAATCCCTAG+AGG + chr4_2:57731955-57731974 Msa0610090:intron 40.0%
! TGGTTTCATGAAGCATCTAC+AGG - chr4_2:57732051-57732070 None:intergenic 40.0%
CTCAAAAACGGAACACAATG+TGG - chr4_2:57732071-57732090 None:intergenic 40.0%
! AACTAAGTTGAGGGCATATC+AGG - chr4_2:57732149-57732168 None:intergenic 40.0%
GAGGAAGTGAAACTAAGTTG+AGG - chr4_2:57732159-57732178 None:intergenic 40.0%
!! TAATTGCTTTGGGCTTGTTG+TGG + chr4_2:57732443-57732462 Msa0610090:intron 40.0%
TTAAGACCTATAAGCCCAAC+AGG + chr4_2:57732573-57732592 Msa0610090:intron 40.0%
AATCTACCTGTTGGGCTTAT+AGG - chr4_2:57732582-57732601 None:intergenic 40.0%
! TACTCCCAATAGTTTGGCTT+TGG + chr4_2:57732659-57732678 Msa0610090:intron 40.0%
GTTGACCAAAGCCAAACTAT+TGG - chr4_2:57732667-57732686 None:intergenic 40.0%
! AATTTTTCCTCCATGGTCTC+AGG - chr4_2:57732857-57732876 None:intergenic 40.0%
TCAAATGAGGAATCTGCAGA+TGG + chr4_2:57732935-57732954 Msa0610090:CDS 40.0%
GGAACTACTTATCCGTGATT+TGG + chr4_2:57733015-57733034 Msa0610090:CDS 40.0%
!!! AGACTGCTGGTTTTTCTGAT+AGG + chr4_2:57733095-57733114 Msa0610090:CDS 40.0%
TTTCAAGGTAGCAAGGATAG+GGG + chr4_2:57733232-57733251 Msa0610090:CDS 40.0%
TAGGCAGAGTTTACCATAAG+TGG - chr4_2:57733340-57733359 None:intergenic 40.0%
TATCGGGCCAAAATGAAAAG+GGG - chr4_2:57733449-57733468 None:intergenic 40.0%
GTTATCGGGCCAAAATGAAA+AGG - chr4_2:57733451-57733470 None:intergenic 40.0%
!!! GCTGATATTTGCTGTTTTGC+AGG + chr4_2:57733482-57733501 Msa0610090:intron 40.0%
!!! TGGTGAACACCAGTTTTTTG+TGG + chr4_2:57733523-57733542 Msa0610090:exon 40.0%
ATGATTGTTGCTCCAATTCC+TGG - chr4_2:57733633-57733652 None:intergenic 40.0%
GAGCAACAATCATTGAGTAC+TGG + chr4_2:57733640-57733659 Msa0610090:three_prime_UTR 40.0%
TTCCCCTTCTGGTAATTCTT+TGG + chr4_2:57733718-57733737 Msa0610090:three_prime_UTR 40.0%
TCCCCTTCTGGTAATTCTTT+GGG + chr4_2:57733719-57733738 Msa0610090:three_prime_UTR 40.0%
ACCCAAAGAATTACCAGAAG+GGG - chr4_2:57733723-57733742 None:intergenic 40.0%
CACCCAAAGAATTACCAGAA+GGG - chr4_2:57733724-57733743 None:intergenic 40.0%
ACACCCAAAGAATTACCAGA+AGG - chr4_2:57733725-57733744 None:intergenic 40.0%
TGGTAATTCTTTGGGTGTCT+GGG + chr4_2:57733727-57733746 Msa0610090:three_prime_UTR 40.0%
TTTGAGCAGATGCAAAACAG+GGG - chr4_2:57733853-57733872 None:intergenic 40.0%
GTAGTTTCTTTCCCACATGC+AGG + chr4_2:57726765-57726784 Msa0610090:five_prime_UTR 45.0%
AATGCGAAAGGGAATGCGAA+TGG - chr4_2:57726857-57726876 None:intergenic 45.0%
GGAGAGGTTAGAATGCGAAA+GGG - chr4_2:57726868-57726887 None:intergenic 45.0%
AAAATGTGGTTGTTGAGCCG+GGG - chr4_2:57726945-57726964 None:intergenic 45.0%
GAAAATGTGGTTGTTGAGCC+GGG - chr4_2:57726946-57726965 None:intergenic 45.0%
TCTCGAAAATGTCGAAACCC+TGG + chr4_2:57727019-57727038 Msa0610090:exon 45.0%
CTCGAAAATGTCGAAACCCT+GGG + chr4_2:57727020-57727039 Msa0610090:exon 45.0%
TCGAAAATGTCGAAACCCTG+GGG + chr4_2:57727021-57727040 Msa0610090:exon 45.0%
AGACTAGGGAAGTTGTCTGA+CGG - chr4_2:57727126-57727145 None:intergenic 45.0%
AGACAACTTCCCTAGTCTCA+AGG + chr4_2:57727128-57727147 Msa0610090:CDS 45.0%
TTACGGCTTCCTTGAGACTA+GGG - chr4_2:57727140-57727159 None:intergenic 45.0%
TGTCAAACGAGGGATATCAG+CGG - chr4_2:57727238-57727257 None:intergenic 45.0%
TGATATCCCTCGTTTGACAC+CGG + chr4_2:57727239-57727258 Msa0610090:CDS 45.0%
ATGCAGTTTAACCGTCTTGG+CGG + chr4_2:57727312-57727331 Msa0610090:CDS 45.0%
GCTGGAAGAAGATCTTATGG+TGG + chr4_2:57727411-57727430 Msa0610090:CDS 45.0%
TTTCGGAATTTGAACCGTCC+AGG + chr4_2:57727469-57727488 Msa0610090:CDS 45.0%
TTCGGAATTTGAACCGTCCA+GGG + chr4_2:57727470-57727489 Msa0610090:CDS 45.0%
CTGATTCTGATTCTGACGAC+CGG - chr4_2:57727550-57727569 None:intergenic 45.0%
CAGAATCGATATGGTGGTAG+TGG + chr4_2:57727567-57727586 Msa0610090:CDS 45.0%
!! AATCGATATGGTGGTAGTGG+TGG + chr4_2:57727570-57727589 Msa0610090:CDS 45.0%
! TGAATCTAAGGCAGATGGAG+TGG + chr4_2:57727614-57727633 Msa0610090:CDS 45.0%
AGGCAGATGGAGTGGATAAT+TGG + chr4_2:57727622-57727641 Msa0610090:CDS 45.0%
GGCAGATGGAGTGGATAATT+GGG + chr4_2:57727623-57727642 Msa0610090:CDS 45.0%
AGATGGAGTGGATAATTGGG+CGG + chr4_2:57727626-57727645 Msa0610090:CDS 45.0%
CCGCTTCCTGTTAGATCTTA+TGG + chr4_2:57727660-57727679 Msa0610090:CDS 45.0%
TATGGTGGTTCTCGTGATTC+TGG + chr4_2:57727678-57727697 Msa0610090:CDS 45.0%
! TGGTTCTCGTGATTCTGGAA+TGG + chr4_2:57727683-57727702 Msa0610090:CDS 45.0%
CTTGGATCCAAAACCAACCT+AGG - chr4_2:57727798-57727817 None:intergenic 45.0%
!!! CTAGGTTGGTTTTGGATCCA+AGG + chr4_2:57727796-57727815 Msa0610090:CDS 45.0%
TTGGATCCAAGGAAAGGTGA+TGG + chr4_2:57727807-57727826 Msa0610090:CDS 45.0%
ACAGAACCATCACCTTTCCT+TGG - chr4_2:57727816-57727835 None:intergenic 45.0%
TGGCGGAGAAAGGATATGAT+TGG + chr4_2:57727907-57727926 Msa0610090:CDS 45.0%
!! GAAGCTGGATTCTGAGATTG+AGG + chr4_2:57727932-57727951 Msa0610090:CDS 45.0%
CTGCTGGAATGTGAACTTGT+AGG - chr4_2:57727975-57727994 None:intergenic 45.0%
CTACAAGTTCACATTCCAGC+AGG + chr4_2:57727973-57727992 Msa0610090:CDS 45.0%
CGATTGGATTGAGCACTTGA+AGG - chr4_2:57727999-57728018 None:intergenic 45.0%
!! TTTTGGAGATGCCAAACCCA+GGG + chr4_2:57728067-57728086 Msa0610090:CDS 45.0%
GCGGAAGATGGATCTTGAAT+TGG + chr4_2:57728121-57728140 Msa0610090:CDS 45.0%
!! TTGGTAGATAGGTTGGTGAC+TGG + chr4_2:57728814-57728833 Msa0610090:intron 45.0%
!! TAGATAGGTTGGTGACTGGA+TGG + chr4_2:57728818-57728837 Msa0610090:intron 45.0%
ACTCCAAGAAGGCTAGAAAG+AGG + chr4_2:57729326-57729345 Msa0610090:intron 45.0%
GGCTAGAAAGAGGTAAACCA+TGG + chr4_2:57729336-57729355 Msa0610090:intron 45.0%
AGGCAAGGGAATGAAAGCAA+GGG + chr4_2:57729497-57729516 Msa0610090:intron 45.0%
AATGAAAGCAAGGGGTAGTG+AGG + chr4_2:57729506-57729525 Msa0610090:intron 45.0%
! GGAGATTAGTCACCGCTAAA+CGG - chr4_2:57729776-57729795 None:intergenic 45.0%
GAACCTTAGGGCACACAAAA+TGG + chr4_2:57729802-57729821 Msa0610090:intron 45.0%
! CAACCATTTTGTGTGCCCTA+AGG - chr4_2:57729808-57729827 None:intergenic 45.0%
GTTCAGCAGGGGTGATAAAA+AGG + chr4_2:57730076-57730095 Msa0610090:intron 45.0%
TGTTGAAGTATATCCCCCTC+AGG - chr4_2:57730360-57730379 None:intergenic 45.0%
! ATGAGTATGGGTTGCACACA+TGG - chr4_2:57730384-57730403 None:intergenic 45.0%
GGCCATAAAAAGATCGGTAG+GGG + chr4_2:57730607-57730626 Msa0610090:intron 45.0%
! CTCCCCTACCGATCTTTTTA+TGG - chr4_2:57730612-57730631 None:intergenic 45.0%
TTATCTTTGGTCTGGTGCGA+AGG + chr4_2:57730663-57730682 Msa0610090:intron 45.0%
TGACAGCTCTATCTCGATGT+TGG - chr4_2:57731152-57731171 None:intergenic 45.0%
ACAATAGATCCTGCTGAAGG+TGG - chr4_2:57731176-57731195 None:intergenic 45.0%
!!! TGAGTTTTGAAAGTGACCCC+AGG - chr4_2:57731279-57731298 None:intergenic 45.0%
! TGGGGTCACTTTCAAAACTC+AGG + chr4_2:57731278-57731297 Msa0610090:intron 45.0%
! GGGGTCACTTTCAAAACTCA+GGG + chr4_2:57731279-57731298 Msa0610090:intron 45.0%
!!! CTAGTTTTGGCCAGGAAGTA+TGG + chr4_2:57731367-57731386 Msa0610090:intron 45.0%
TTTCAGCTTCCCATACTTCC+TGG - chr4_2:57731380-57731399 None:intergenic 45.0%
GAAGCTGAAAGACATCCAGT+AGG + chr4_2:57731390-57731409 Msa0610090:intron 45.0%
CTGTATTTGGAAGTGGAGTC+TGG + chr4_2:57731529-57731548 Msa0610090:intron 45.0%
GTATTTGGAAGTGGAGTCTG+GGG + chr4_2:57731531-57731550 Msa0610090:intron 45.0%
TCTGGGGAGTTGACAATGAA+AGG + chr4_2:57731547-57731566 Msa0610090:intron 45.0%
! TGCTTTGCAGTAGTTTGTGG+GGG + chr4_2:57731734-57731753 Msa0610090:intron 45.0%
TTTGGCTGTTACACCCTCTA+GGG - chr4_2:57731972-57731991 None:intergenic 45.0%
ATTTGGCTGTTACACCCTCT+AGG - chr4_2:57731973-57731992 None:intergenic 45.0%
AGGGTGTAACAGCCAAATAG+AGG + chr4_2:57731975-57731994 Msa0610090:intron 45.0%
CGCAACTATAACAGCAGCTA+TGG - chr4_2:57732017-57732036 None:intergenic 45.0%
!!! GTGTTCCGTTTTTGAGTACC+AGG + chr4_2:57732075-57732094 Msa0610090:intron 45.0%
GTTCGCCTGGTACTCAAAAA+CGG - chr4_2:57732083-57732102 None:intergenic 45.0%
GGGCATTACATCGACGATAA+GGG - chr4_2:57732361-57732380 None:intergenic 45.0%
TGGGCATTACATCGACGATA+AGG - chr4_2:57732362-57732381 None:intergenic 45.0%
GCTATAACAGGTGGCAGTAT+GGG - chr4_2:57732381-57732400 None:intergenic 45.0%
AGCTATAACAGGTGGCAGTA+TGG - chr4_2:57732382-57732401 None:intergenic 45.0%
ACTAGAGAAAGAAAGGGAGC+TGG + chr4_2:57732994-57733013 Msa0610090:CDS 45.0%
TTGGGCAGAAAGCTGTTGAA+AGG + chr4_2:57733053-57733072 Msa0610090:CDS 45.0%
TTTCTGATAGGCCACCATCT+CGG + chr4_2:57733107-57733126 Msa0610090:CDS 45.0%
TTCAAGGTAGCAAGGATAGG+GGG + chr4_2:57733233-57733252 Msa0610090:CDS 45.0%
TGTTGCTCAAACTGTAGCTG+TGG + chr4_2:57733374-57733393 Msa0610090:intron 45.0%
GGTCAAGTTCCAAAGAGAGA+TGG + chr4_2:57733503-57733522 Msa0610090:intron 45.0%
TGGTGTTCACCATCTCTCTT+TGG - chr4_2:57733515-57733534 None:intergenic 45.0%
CTGGTAATTCTTTGGGTGTC+TGG + chr4_2:57733726-57733745 Msa0610090:three_prime_UTR 45.0%
TTGAGCAGATGCAAAACAGG+GGG - chr4_2:57733852-57733871 None:intergenic 45.0%
CGGTTTCTTTCCCTGCATGT+GGG - chr4_2:57726779-57726798 None:intergenic 50.0%
ACGGTTTCTTTCCCTGCATG+TGG - chr4_2:57726780-57726799 None:intergenic 50.0%
GAAAGGGAATGCGAATGGAG+AGG - chr4_2:57726852-57726871 None:intergenic 50.0%
GGGAGAGGTTAGAATGCGAA+AGG - chr4_2:57726869-57726888 None:intergenic 50.0%
GATAAAGAAGGGAAGGGGAG+AGG - chr4_2:57726884-57726903 None:intergenic 50.0%
TTTGCATGTTCTCGGAGCTC+CGG + chr4_2:57726905-57726924 Msa0610090:five_prime_UTR 50.0%
TCGAAACCCTGGGGCAATAT+CGG + chr4_2:57727030-57727049 Msa0610090:CDS 50.0%
GTTACGGCTTCCTTGAGACT+AGG - chr4_2:57727141-57727160 None:intergenic 50.0%
TCGCTCTCTGAATTCACACG+TGG + chr4_2:57727189-57727208 Msa0610090:CDS 50.0%
CTCTCTGAATTCACACGTGG+AGG + chr4_2:57727192-57727211 Msa0610090:CDS 50.0%
GAGATGCTTCGTCTTCCTAC+CGG + chr4_2:57727264-57727283 Msa0610090:CDS 50.0%
AGCAGAACGTTCCTTAGGAC+CGG - chr4_2:57727286-57727305 None:intergenic 50.0%
TCCTAAGGAACGTTCTGCTG+AGG + chr4_2:57727287-57727306 Msa0610090:CDS 50.0%
TCCTCAGCAGAACGTTCCTT+AGG - chr4_2:57727291-57727310 None:intergenic 50.0%
AAGAGAAACCACCGCCAAGA+CGG - chr4_2:57727326-57727345 None:intergenic 50.0%
GGTGGTTTCTCTTCCTATGG+CGG + chr4_2:57727333-57727352 Msa0610090:CDS 50.0%
!! AGCCTCTGGTGATGGTTCTT+GGG + chr4_2:57727386-57727405 Msa0610090:CDS 50.0%
! GGCGCTGGAAGAAGATCTTA+TGG + chr4_2:57727408-57727427 Msa0610090:CDS 50.0%
! AACGTAGAGCGCCAAGTTCT+AGG + chr4_2:57727445-57727464 Msa0610090:CDS 50.0%
! ACGTAGAGCGCCAAGTTCTA+GGG + chr4_2:57727446-57727465 Msa0610090:CDS 50.0%
!! AGCGCCAAGTTCTAGGGTTT+CGG + chr4_2:57727452-57727471 Msa0610090:CDS 50.0%
GGCTGACGAGGTGGATAATT+GGG + chr4_2:57727491-57727510 Msa0610090:CDS 50.0%
TGACGACCGGAATCAAACGA+CGG - chr4_2:57727537-57727556 None:intergenic 50.0%
! GGTGGTGAATCTAAGGCAGA+TGG + chr4_2:57727609-57727628 Msa0610090:CDS 50.0%
TGGAATGGAACCAGATCGGT+GGG + chr4_2:57727698-57727717 Msa0610090:CDS 50.0%
GTTCTGCTGTGGAACCAGAT+CGG + chr4_2:57727727-57727746 Msa0610090:CDS 50.0%
! CTCGCTGCACCAAATGGATT+CGG - chr4_2:57727870-57727889 None:intergenic 50.0%
TTGAGGCGAAAAAGACGAGC+AGG + chr4_2:57727949-57727968 Msa0610090:CDS 50.0%
CTGGGTTTGGCATCTCCAAA+AGG - chr4_2:57728068-57728087 None:intergenic 50.0%
!! CTTTTGGAGATGCCAAACCC+AGG + chr4_2:57728066-57728085 Msa0610090:CDS 50.0%
AAGCAAAACCTCCCTGGGTT+TGG - chr4_2:57728081-57728100 None:intergenic 50.0%
TCGCTAAGCAAAACCTCCCT+GGG - chr4_2:57728086-57728105 None:intergenic 50.0%
TTTGCTTAGCGAGCGTGGTA+AGG + chr4_2:57728094-57728113 Msa0610090:CDS 50.0%
TTAGCGAGCGTGGTAAGGAT+TGG + chr4_2:57728099-57728118 Msa0610090:CDS 50.0%
! TGGTAAGGATTGGCGGAAGA+TGG + chr4_2:57728109-57728128 Msa0610090:CDS 50.0%
! TCTATCAGGGGCACGTGTAT+TGG + chr4_2:57728397-57728416 Msa0610090:intron 50.0%
GAGGCAAGGGAATGAAAGCA+AGG + chr4_2:57729496-57729515 Msa0610090:intron 50.0%
GGCAAGGGAATGAAAGCAAG+GGG + chr4_2:57729498-57729517 Msa0610090:intron 50.0%
AAGTTTCCACCGCCGTTTAG+CGG + chr4_2:57729761-57729780 Msa0610090:intron 50.0%
! GATTAGTCACCGCTAAACGG+CGG - chr4_2:57729773-57729792 None:intergenic 50.0%
AATCTCCGTCTCCGAACCTT+AGG + chr4_2:57729789-57729808 Msa0610090:intron 50.0%
ATCTCCGTCTCCGAACCTTA+GGG + chr4_2:57729790-57729809 Msa0610090:intron 50.0%
ACAGCAGTACACCAGCCAAA+GGG - chr4_2:57731313-57731332 None:intergenic 50.0%
AACAGCAGTACACCAGCCAA+AGG - chr4_2:57731314-57731333 None:intergenic 50.0%
TTTGGCTGGTGTACTGCTGT+TGG + chr4_2:57731313-57731332 Msa0610090:intron 50.0%
GCTGAAAGACATCCAGTAGG+TGG + chr4_2:57731393-57731412 Msa0610090:intron 50.0%
TTTGAGTACCAGGCGAACAG+CGG + chr4_2:57732085-57732104 Msa0610090:intron 50.0%
!! ACTTTTCAGGCCTGAGACCA+TGG + chr4_2:57732844-57732863 Msa0610090:intron 50.0%
GCATTGCACGTGTACCAGTT+TGG - chr4_2:57732973-57732992 None:intergenic 50.0%
CAGAAAGCTGTTGAAAGGCC+TGG + chr4_2:57733058-57733077 Msa0610090:CDS 50.0%
TCAAATGAGCCAGACCGAGA+TGG - chr4_2:57733124-57733143 None:intergenic 50.0%
! ATCTCGGTCTGGCTCATTTG+AGG + chr4_2:57733123-57733142 Msa0610090:CDS 50.0%
TCGACATATCACCTGTGCCA+CGG - chr4_2:57733186-57733205 None:intergenic 50.0%
CAAACTGTAGCTGTGGCAAC+TGG + chr4_2:57733381-57733400 Msa0610090:intron 50.0%
TGTAGCTGTGGCAACTGGTT+GGG + chr4_2:57733386-57733405 Msa0610090:intron 50.0%
TGTGGCAACTGGTTGGGAAA+TGG + chr4_2:57733392-57733411 Msa0610090:intron 50.0%
GTGGCAACTGGTTGGGAAAT+GGG + chr4_2:57733393-57733412 Msa0610090:intron 50.0%
TTCTTTGGGTGTCTGGGTGA+AGG + chr4_2:57733733-57733752 Msa0610090:three_prime_UTR 50.0%
CAAGCTCCGATATTGCCCCA+GGG - chr4_2:57727039-57727058 None:intergenic 55.0%
CTGGGGCAATATCGGAGCTT+GGG + chr4_2:57727038-57727057 Msa0610090:CDS 55.0%
AGGGAAGTTGTCTGACGGAG+CGG - chr4_2:57727121-57727140 None:intergenic 55.0%
ACACGTGGAGGTTACTCCTC+CGG + chr4_2:57727204-57727223 Msa0610090:CDS 55.0%
TATCCCTCGTTTGACACCGG+AGG + chr4_2:57727242-57727261 Msa0610090:CDS 55.0%
! TCTCCTCCGGTGTCAAACGA+GGG - chr4_2:57727248-57727267 None:intergenic 55.0%
! ATCTCCTCCGGTGTCAAACG+AGG - chr4_2:57727249-57727268 None:intergenic 55.0%
! GGAAGACGAAGCATCTCCTC+CGG - chr4_2:57727261-57727280 None:intergenic 55.0%
TCGTCTTCCTACCGGTCCTA+AGG + chr4_2:57727272-57727291 Msa0610090:CDS 55.0%
GAACGTTCCTTAGGACCGGT+AGG - chr4_2:57727282-57727301 None:intergenic 55.0%
CAGTTTAACCGTCTTGGCGG+TGG + chr4_2:57727315-57727334 Msa0610090:CDS 55.0%
GGCGGTGGTTTCTCTTCCTA+TGG + chr4_2:57727330-57727349 Msa0610090:CDS 55.0%
GGTTTCTCTTCCTATGGCGG+TGG + chr4_2:57727336-57727355 Msa0610090:CDS 55.0%
TTCTCTTCCTATGGCGGTGG+TGG + chr4_2:57727339-57727358 Msa0610090:CDS 55.0%
!! GAGCCTCTGGTGATGGTTCT+TGG + chr4_2:57727385-57727404 Msa0610090:CDS 55.0%
!! GCCTCTGGTGATGGTTCTTG+GGG + chr4_2:57727387-57727406 Msa0610090:CDS 55.0%
ATTATCCACCTCGTCAGCCC+TGG - chr4_2:57727490-57727509 None:intergenic 55.0%
GGGCTGACGAGGTGGATAAT+TGG + chr4_2:57727490-57727509 Msa0610090:CDS 55.0%
CGAGGTGGATAATTGGGCGT+CGG + chr4_2:57727497-57727516 Msa0610090:CDS 55.0%
TCGCTCCCGTCGTTTGATTC+CGG + chr4_2:57727528-57727547 Msa0610090:CDS 55.0%
GACGACCGGAATCAAACGAC+GGG - chr4_2:57727536-57727555 None:intergenic 55.0%
!! CGATATGGTGGTAGTGGTGG+TGG + chr4_2:57727573-57727592 Msa0610090:CDS 55.0%
!! TATGGTGGTAGTGGTGGTGG+TGG + chr4_2:57727576-57727595 Msa0610090:CDS 55.0%
!!! AGTGGTGGTGGTGGTGGTTT+TGG + chr4_2:57727585-57727604 Msa0610090:CDS 55.0%
GGAGTGGATAATTGGGCGGT+TGG + chr4_2:57727630-57727649 Msa0610090:CDS 55.0%
CTGGAATGGAACCAGATCGG+TGG + chr4_2:57727697-57727716 Msa0610090:CDS 55.0%
TGGTTCCACAGCAGAACCTC+TGG - chr4_2:57727724-57727743 None:intergenic 55.0%
TGCTGTGGAACCAGATCGGT+GGG + chr4_2:57727731-57727750 Msa0610090:CDS 55.0%
TGTTGCTGCTCCGTATCACG+CGG - chr4_2:57727768-57727787 None:intergenic 55.0%
!!! GCAGCGTCCTAGGTTGGTTT+TGG + chr4_2:57727788-57727807 Msa0610090:CDS 55.0%
!! CGAATCCATTTGGTGCAGCG+AGG + chr4_2:57727868-57727887 Msa0610090:CDS 55.0%
!! ATTTGGTGCAGCGAGGCCTA+GGG + chr4_2:57727875-57727894 Msa0610090:CDS 55.0%
!! GAGGAAGTGTTGGCGGAGAA+AGG + chr4_2:57727897-57727916 Msa0610090:CDS 55.0%
TTGAGCACTTGAAGGCCTGC+TGG - chr4_2:57727991-57728010 None:intergenic 55.0%
TGCTCAATCCAATCGCTCCG+AGG + chr4_2:57728004-57728023 Msa0610090:CDS 55.0%
GCTCAATCCAATCGCTCCGA+GGG + chr4_2:57728005-57728024 Msa0610090:CDS 55.0%
ATCTTGACCCTCGGAGCGAT+TGG - chr4_2:57728015-57728034 None:intergenic 55.0%
AATCGCTCCGAGGGTCAAGA+TGG + chr4_2:57728014-57728033 Msa0610090:CDS 55.0%
AAGATGGTGCGCTGAAACCG+AGG + chr4_2:57728030-57728049 Msa0610090:CDS 55.0%
CTCGCTAAGCAAAACCTCCC+TGG - chr4_2:57728087-57728106 None:intergenic 55.0%
! GAGGTTTTGCTTAGCGAGCG+TGG + chr4_2:57728089-57728108 Msa0610090:CDS 55.0%
AGGGGTAGTGAGGCATGACT+AGG + chr4_2:57729516-57729535 Msa0610090:intron 55.0%
GGGGTAGTGAGGCATGACTA+GGG + chr4_2:57729517-57729536 Msa0610090:intron 55.0%
TGTGCCCTAAGGTTCGGAGA+CGG - chr4_2:57729797-57729816 None:intergenic 55.0%
AGCTGTCATCCACCTTCAGC+AGG + chr4_2:57731164-57731183 Msa0610090:intron 55.0%
!! TGTACTGCTGTTGGTGACCC+TGG + chr4_2:57731322-57731341 Msa0610090:intron 55.0%
!! GTACTGCTGTTGGTGACCCT+GGG + chr4_2:57731323-57731342 Msa0610090:intron 55.0%
ACATCCAGTAGGTGGCTCAC+TGG + chr4_2:57731401-57731420 Msa0610090:intron 55.0%
AAAGCCAGTGAGCCACCTAC+TGG - chr4_2:57731408-57731427 None:intergenic 55.0%
TTTCAGGCCTGAGACCATGG+AGG + chr4_2:57732847-57732866 Msa0610090:intron 55.0%
GAGGAATCTGCAGATGGTGC+TGG + chr4_2:57732941-57732960 Msa0610090:CDS 55.0%
! GAATCTGCAGATGGTGCTGG+TGG + chr4_2:57732944-57732963 Msa0610090:CDS 55.0%
GTCTTTCCTGCTGACGAACC+AGG - chr4_2:57733079-57733098 None:intergenic 55.0%
TCGTCAGCAGGAAAGACTGC+TGG + chr4_2:57733082-57733101 Msa0610090:CDS 55.0%
AATGAGCCAGACCGAGATGG+TGG - chr4_2:57733121-57733140 None:intergenic 55.0%
CGACATATCACCTGTGCCAC+GGG - chr4_2:57733185-57733204 None:intergenic 55.0%
AAGGTAGCAAGGATAGGGGG+TGG + chr4_2:57733236-57733255 Msa0610090:CDS 55.0%
CTGTAGCTGTGGCAACTGGT+TGG + chr4_2:57733385-57733404 Msa0610090:intron 55.0%
! GAGGATCGATTGGTCACGCG+CGG - chr4_2:57726804-57726823 None:intergenic 60.0%
CGGAGCTCCGGCTCCATTAA+CGG + chr4_2:57726917-57726936 Msa0610090:five_prime_UTR 60.0%
TTGAGCCGGGGCTCCGTTAA+TGG - chr4_2:57726933-57726952 None:intergenic 60.0%
CCAAGCTCCGATATTGCCCC+AGG - chr4_2:57727040-57727059 None:intergenic 60.0%
CCTGGGGCAATATCGGAGCT+TGG + chr4_2:57727037-57727056 Msa0610090:CDS 60.0%
GGGCAATATCGGAGCTTGGG+CGG + chr4_2:57727041-57727060 Msa0610090:CDS 60.0%
TTCGCGTTCTTCGGCTTCGG+CGG - chr4_2:57727079-57727098 None:intergenic 60.0%
CGCTTCGCGTTCTTCGGCTT+CGG - chr4_2:57727082-57727101 None:intergenic 60.0%
CGAAGCCGAAGAACGCGAAG+CGG + chr4_2:57727080-57727099 Msa0610090:CDS 60.0%
! AGCTGCCGCTTCGCGTTCTT+CGG - chr4_2:57727088-57727107 None:intergenic 60.0%
CGAAGCGGCAGCTAAGTCAG+CGG + chr4_2:57727095-57727114 Msa0610090:CDS 60.0%
! TCTTCCTATGGCGGTGGTGG+TGG + chr4_2:57727342-57727361 Msa0610090:CDS 60.0%
TGGTCGTGGAAGGGATCGTG+AGG + chr4_2:57727362-57727381 Msa0610090:CDS 60.0%
GGTCGTGGAAGGGATCGTGA+GGG + chr4_2:57727363-57727382 Msa0610090:CDS 60.0%
GCCCCAAGAACCATCACCAG+AGG - chr4_2:57727391-57727410 None:intergenic 60.0%
!!! GGTGGTGGTGGTGGTTTTGG+TGG + chr4_2:57727588-57727607 Msa0610090:CDS 60.0%
!!! GGTGGTGGTGGTTTTGGTGG+TGG + chr4_2:57727591-57727610 Msa0610090:CDS 60.0%
CTGCTGTGGAACCAGATCGG+TGG + chr4_2:57727730-57727749 Msa0610090:CDS 60.0%
!! GAACCAGATCGGTGGGCTAG+AGG + chr4_2:57727738-57727757 Msa0610090:CDS 60.0%
!! TAGAGGAGCGCCGCGTGATA+CGG + chr4_2:57727755-57727774 Msa0610090:CDS 60.0%
AGCAGCAACAGCAGCGTCCT+AGG + chr4_2:57727778-57727797 Msa0610090:CDS 60.0%
GCAACAGCAGCGTCCTAGGT+TGG + chr4_2:57727782-57727801 Msa0610090:CDS 60.0%
CTAGGCCTCGCTGCACCAAA+TGG - chr4_2:57727876-57727895 None:intergenic 60.0%
!! CATTTGGTGCAGCGAGGCCT+AGG + chr4_2:57727874-57727893 Msa0610090:CDS 60.0%
! GAGGCCTAGGGAGGAAGTGT+TGG + chr4_2:57727887-57727906 Msa0610090:CDS 60.0%
!! GCCTAGGGAGGAAGTGTTGG+CGG + chr4_2:57727890-57727909 Msa0610090:CDS 60.0%
TCCGCCAACACTTCCTCCCT+AGG - chr4_2:57727894-57727913 None:intergenic 60.0%
CAGCGCACCATCTTGACCCT+CGG - chr4_2:57728024-57728043 None:intergenic 60.0%
TGGAGATGCCAAACCCAGGG+AGG + chr4_2:57728070-57728089 Msa0610090:CDS 60.0%
GCGAGCGTGGTAAGGATTGG+CGG + chr4_2:57728102-57728121 Msa0610090:CDS 60.0%
!! TGGAGCATCGCGCCGTTGAT+AGG + chr4_2:57728141-57728160 Msa0610090:CDS 60.0%
TAGTCACCGCTAAACGGCGG+TGG - chr4_2:57729770-57729789 None:intergenic 60.0%
CTCAGGGCAGCATCTCCCTT+TGG + chr4_2:57731295-57731314 Msa0610090:intron 60.0%
GGAGGTCAAGGGGACTCCAA+AGG + chr4_2:57731853-57731872 Msa0610090:intron 60.0%
!! GGTGCTGGTGGAGACCAAAC+TGG + chr4_2:57732956-57732975 Msa0610090:CDS 60.0%
! GAAAGGCCTGGTTCGTCAGC+AGG + chr4_2:57733070-57733089 Msa0610090:CDS 60.0%
GATAGGCCACCATCTCGGTC+TGG + chr4_2:57733112-57733131 Msa0610090:CDS 60.0%
! TCGATTGGTCACGCGCGGCA+CGG - chr4_2:57726799-57726818 None:intergenic 65.0%
CGGGGCTCCGTTAATGGAGC+CGG - chr4_2:57726927-57726946 None:intergenic 65.0%
CGGCTCCATTAACGGAGCCC+CGG + chr4_2:57726925-57726944 Msa0610090:five_prime_UTR 65.0%
CGGAGCTTGGGCGGCTGATT+CGG + chr4_2:57727050-57727069 Msa0610090:CDS 65.0%
!! AGCTTGGGCGGCTGATTCGG+AGG + chr4_2:57727053-57727072 Msa0610090:CDS 65.0%
CGTGGAGGTTACTCCTCCGG+TGG + chr4_2:57727207-57727226 Msa0610090:CDS 65.0%
GGAGGTTACTCCTCCGGTGG+TGG + chr4_2:57727210-57727229 Msa0610090:CDS 65.0%
GATATCAGCGGCGCCACCAC+CGG - chr4_2:57727226-57727245 None:intergenic 65.0%
ACGACCACCACCACCGCCAT+AGG - chr4_2:57727349-57727368 None:intergenic 65.0%
!! TATGGCGGTGGTGGTGGTCG+TGG + chr4_2:57727348-57727367 Msa0610090:CDS 65.0%
!! CGGTGGTGGTGGTCGTGGAA+GGG + chr4_2:57727353-57727372 Msa0610090:CDS 65.0%
AGGGATCGTGAGGGAGCCTC+TGG + chr4_2:57727372-57727391 Msa0610090:CDS 65.0%
CGTGAGGGAGCCTCTGGTGA+TGG + chr4_2:57727378-57727397 Msa0610090:CDS 65.0%
! GGTGATGGTTCTTGGGGCGC+TGG + chr4_2:57727393-57727412 Msa0610090:CDS 65.0%
TGAACCGTCCAGGGCTGACG+AGG + chr4_2:57727479-57727498 Msa0610090:CDS 65.0%
TCCACCTCGTCAGCCCTGGA+CGG - chr4_2:57727486-57727505 None:intergenic 65.0%
!! GGTGGTAGTGGTGGTGGTGG+TGG + chr4_2:57727579-57727598 Msa0610090:CDS 65.0%
GAACCAGATCGGTGGGCCAG+AGG + chr4_2:57727705-57727724 Msa0610090:CDS 65.0%
GAACCTCTGGCCCACCGATC+TGG - chr4_2:57727711-57727730 None:intergenic 65.0%
GTGGGCCAGAGGTTCTGCTG+TGG + chr4_2:57727716-57727735 Msa0610090:CDS 65.0%
GCTCCTCTAGCCCACCGATC+TGG - chr4_2:57727744-57727763 None:intergenic 65.0%
GGGCAGCATCTCCCTTTGGC+TGG + chr4_2:57731299-57731318 Msa0610090:intron 65.0%
TGCAACAGCCGCTGTTCGCC+TGG - chr4_2:57732096-57732115 None:intergenic 65.0%
CTGTGCCACGGGATCGAGGT+CGG - chr4_2:57733174-57733193 None:intergenic 65.0%
TCACCTGTGCCACGGGATCG+AGG - chr4_2:57733178-57733197 None:intergenic 65.0%
!! GCGGTGGTGGTGGTCGTGGA+AGG + chr4_2:57727352-57727371 Msa0610090:CDS 70.0%
ACCGTCCAGGGCTGACGAGG+TGG + chr4_2:57727482-57727501 Msa0610090:CDS 70.0%
TGGTGCAGCGAGGCCTAGGG+AGG + chr4_2:57727878-57727897 Msa0610090:CDS 70.0%
ACGGACCGACCTCGATCCCG+TGG + chr4_2:57733166-57733185 Msa0610090:CDS 70.0%
CGACCTCGATCCCGTGGCAC+AGG + chr4_2:57733172-57733191 Msa0610090:CDS 70.0%
ATCAGCGGCGCCACCACCGG+AGG - chr4_2:57727223-57727242 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 57726746 57733872 57726746 ID=Msa0610090;Name=Msa0610090
chr4_2 mRNA 57726746 57733872 57726746 ID=Msa0610090-mRNA-1;Parent=Msa0610090;Name=Msa0610090-mRNA-1;_AED=0.01;_eAED=0.01;_QI=281|1|1|1|0.5|0.66|3|344|530
chr4_2 exon 57726746 57728162 57726746 ID=Msa0610090-mRNA-1:exon:15014;Parent=Msa0610090-mRNA-1
chr4_2 exon 57732853 57733284 57732853 ID=Msa0610090-mRNA-1:exon:15015;Parent=Msa0610090-mRNA-1
chr4_2 exon 57733504 57733872 57733504 ID=Msa0610090-mRNA-1:exon:15016;Parent=Msa0610090-mRNA-1
chr4_2 five_prime_UTR 57726746 57727026 57726746 ID=Msa0610090-mRNA-1:five_prime_utr;Parent=Msa0610090-mRNA-1
chr4_2 CDS 57727027 57728162 57727027 ID=Msa0610090-mRNA-1:cds;Parent=Msa0610090-mRNA-1
chr4_2 CDS 57732853 57733284 57732853 ID=Msa0610090-mRNA-1:cds;Parent=Msa0610090-mRNA-1
chr4_2 CDS 57733504 57733528 57733504 ID=Msa0610090-mRNA-1:cds;Parent=Msa0610090-mRNA-1
chr4_2 three_prime_UTR 57733529 57733872 57733529 ID=Msa0610090-mRNA-1:three_prime_utr;Parent=Msa0610090-mRNA-1
Gene Sequence

>Msa0610090

ATGTCGAAACCCTGGGGCAATATCGGAGCTTGGGCGGCTGATTCGGAGGCCGCCGAAGCCGAAGAACGCGAAGCGGCAGCTAAGTCAGCGGCCGCTCCGTCAGACAACTTCCCTAGTCTCAAGGAAGCCGTAACTACCAAACCGAAGAAGAATAAGAAGATGTCGCTCTCTGAATTCACACGTGGAGGTTACTCCTCCGGTGGTGGCGCCGCTGATATCCCTCGTTTGACACCGGAGGAGATGCTTCGTCTTCCTACCGGTCCTAAGGAACGTTCTGCTGAGGAAATGCAGTTTAACCGTCTTGGCGGTGGTTTCTCTTCCTATGGCGGTGGTGGTGGTCGTGGAAGGGATCGTGAGGGAGCCTCTGGTGATGGTTCTTGGGGCGCTGGAAGAAGATCTTATGGTGGATTTGATGATGAACGTAGAGCGCCAAGTTCTAGGGTTTCGGAATTTGAACCGTCCAGGGCTGACGAGGTGGATAATTGGGCGTCGGTGAAGAAGTCGCTCCCGTCGTTTGATTCCGGTCGTCAGAATCAGAATCAGAATCGATATGGTGGTAGTGGTGGTGGTGGTGGTTTTGGTGGTGGTGAATCTAAGGCAGATGGAGTGGATAATTGGGCGGTTGGTAAGAAACCGCTTCCTGTTAGATCTTATGGTGGTTCTCGTGATTCTGGAATGGAACCAGATCGGTGGGCCAGAGGTTCTGCTGTGGAACCAGATCGGTGGGCTAGAGGAGCGCCGCGTGATACGGAGCAGCAACAGCAGCGTCCTAGGTTGGTTTTGGATCCAAGGAAAGGTGATGGTTCTGTCAATGAATCTCTGGTGGTGAAGACGAATAAGCCGAATCCATTTGGTGCAGCGAGGCCTAGGGAGGAAGTGTTGGCGGAGAAAGGATATGATTGGAAGAAGCTGGATTCTGAGATTGAGGCGAAAAAGACGAGCAGGCCTACAAGTTCACATTCCAGCAGGCCTTCAAGTGCTCAATCCAATCGCTCCGAGGGTCAAGATGGTGCGCTGAAACCGAGGCCAAAAGTGAATCCTTTTGGAGATGCCAAACCCAGGGAGGTTTTGCTTAGCGAGCGTGGTAAGGATTGGCGGAAGATGGATCTTGAATTGGAGCATCGCGCCGTTGATAGGCCTGAGACCATGGAGGAAAAATTATTAAAAGAAGAGATTGATAATTTGAAGAAGCAACTTGAGAAGGAGCCTACAGTTAATTCAAATGAGGAATCTGCAGATGGTGCTGGTGGAGACCAAACTGGTACACGTGCAATGCTACTAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCTGGTTCGTCAGCAGGAAAGACTGCTGGTTTTTCTGATAGGCCACCATCTCGGTCTGGCTCATTTGAGGATTCAAGAAGTGTGGATTTTACGGACCGACCTCGATCCCGTGGCACAGGTGATATGTCGATGCGCCCTACTGATGACAGAAGACAATTTCAAGGTAGCAAGGATAGGGGGTGGTTTTCGAATAGCAGAGATTTGAATAGGTCAAGTTCCAAAGAGAGATGGTGA
Protein sequence

>Msa0610090

MSKPWGNIGAWAADSEAAEAEEREAAAKSAAAPSDNFPSLKEAVTTKPKKNKKMSLSEFTRGGYSSGGGAADIPRLTPEEMLRLPTGPKERSAEEMQFNRLGGGFSSYGGGGGRGRDREGASGDGSWGAGRRSYGGFDDERRAPSSRVSEFEPSRADEVDNWASVKKSLPSFDSGRQNQNQNRYGGSGGGGGFGGGESKADGVDNWAVGKKPLPVRSYGGSRDSGMEPDRWARGSAVEPDRWARGAPRDTEQQQQRPRLVLDPRKGDGSVNESLVVKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKKTSRPTSSHSSRPSSAQSNRSEGQDGALKPRPKVNPFGDAKPREVLLSERGKDWRKMDLELEHRAVDRPETMEEKLLKEEIDNLKKQLEKEPTVNSNEESADGAGGDQTGTRAMLLEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSMRPTDDRRQFQGSKDRGWFSNSRDLNRSSSKERW*