Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284170 | XP_013445265.1 | 96.398 | 694 | 25 | 0 | 1 | 694 | 1 | 694 | 0.0 | 1397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284170 | sp|Q39128|KAT1_ARATH | 57.040 | 696 | 266 | 5 | 1 | 685 | 1 | 674 | 0.0 | 795 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284170 | A0A072TQ05 | 96.398 | 694 | 25 | 0 | 1 | 694 | 1 | 694 | 0.0 | 1397 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0093440 | Msa1284170 | 0.809524 | 1.813127e-50 | -8.615850e-47 |
| Msa0641030 | Msa1284170 | 0.810915 | 9.089345e-51 | -8.615850e-47 |
| Msa1242430 | Msa1284170 | 0.825152 | 5.476544e-54 | -8.615850e-47 |
| Msa1284170 | Msa1433650 | 0.801285 | 9.678490e-49 | -8.615850e-47 |
| Msa1041550 | Msa1284170 | 0.807168 | 5.765253e-50 | -8.615850e-47 |
| Msa1188820 | Msa1284170 | 0.810202 | 1.296121e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284170 | MtrunA17_Chr8g0356081 | 96.398 | 694 | 25 | 0 | 1 | 694 | 1 | 694 | 0.0 | 1397 |
| Msa1284170 | MtrunA17_Chr2g0286031 | 53.019 | 679 | 201 | 9 | 122 | 694 | 17 | 683 | 0.0 | 665 |
| Msa1284170 | MtrunA17_Chr4g0063141 | 58.861 | 474 | 191 | 2 | 20 | 491 | 26 | 497 | 0.0 | 581 |
| Msa1284170 | MtrunA17_Chr2g0277651 | 50.422 | 474 | 233 | 2 | 22 | 493 | 47 | 520 | 6.17e-169 | 505 |
| Msa1284170 | MtrunA17_Chr1g0148981 | 48.571 | 525 | 206 | 6 | 20 | 483 | 30 | 551 | 7.06e-163 | 494 |
| Msa1284170 | MtrunA17_Chr3g0138671 | 44.681 | 564 | 291 | 8 | 20 | 575 | 23 | 573 | 1.11e-152 | 456 |
| Msa1284170 | MtrunA17_Chr3g0138131 | 53.299 | 394 | 174 | 4 | 23 | 411 | 46 | 434 | 7.26e-139 | 416 |
| Msa1284170 | MtrunA17_Chr5g0434371 | 33.608 | 485 | 305 | 7 | 29 | 504 | 71 | 547 | 8.44e-84 | 282 |
| Msa1284170 | MtrunA17_Chr2g0286041 | 62.121 | 132 | 39 | 1 | 1 | 121 | 1 | 132 | 1.94e-47 | 164 |
| Msa1284170 | MtrunA17_Chr4g0063071 | 32.883 | 222 | 147 | 1 | 262 | 481 | 5 | 226 | 1.41e-32 | 127 |
| Msa1284170 | MtrunA17_Chr4g0062571 | 33.636 | 220 | 130 | 7 | 71 | 288 | 2 | 207 | 1.27e-21 | 94.4 |
| Msa1284170 | MtrunA17_Chr4g0063081 | 32.447 | 188 | 120 | 4 | 54 | 237 | 5 | 189 | 1.32e-21 | 93.2 |
| Msa1284170 | MtrunA17_Chr4g0062561 | 32.889 | 225 | 130 | 8 | 71 | 288 | 2 | 212 | 1.13e-19 | 94.0 |
| Msa1284170 | MtrunA17_Chr4g0073941 | 19.745 | 471 | 279 | 11 | 40 | 420 | 99 | 560 | 1.64e-16 | 83.6 |
| Msa1284170 | MtrunA17_Chr4g0009161 | 49.315 | 73 | 36 | 1 | 419 | 491 | 12 | 83 | 1.11e-11 | 65.1 |
| Msa1284170 | MtrunA17_Chr4g0001481 | 19.271 | 192 | 154 | 1 | 230 | 420 | 374 | 565 | 7.63e-11 | 65.5 |
| Msa1284170 | MtrunA17_Chr3g0138141 | 50.769 | 65 | 32 | 0 | 422 | 486 | 11 | 75 | 8.90e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284170 | AT5G46240.1 | 57.040 | 696 | 266 | 5 | 1 | 685 | 1 | 674 | 0.0 | 795 |
| Msa1284170 | AT4G18290.1 | 56.540 | 711 | 273 | 10 | 1 | 690 | 1 | 696 | 0.0 | 762 |
| Msa1284170 | AT4G18290.2 | 56.540 | 711 | 273 | 10 | 1 | 690 | 12 | 707 | 0.0 | 762 |
| Msa1284170 | AT2G26650.1 | 57.983 | 476 | 193 | 3 | 18 | 491 | 27 | 497 | 0.0 | 582 |
| Msa1284170 | AT2G25600.1 | 56.632 | 475 | 200 | 3 | 21 | 491 | 51 | 523 | 0.0 | 550 |
| Msa1284170 | AT4G32500.1 | 55.625 | 480 | 205 | 3 | 18 | 491 | 44 | 521 | 0.0 | 550 |
| Msa1284170 | AT2G26650.2 | 58.438 | 397 | 158 | 2 | 97 | 491 | 1 | 392 | 4.04e-161 | 483 |
| Msa1284170 | AT4G22200.2 | 48.665 | 487 | 241 | 5 | 15 | 495 | 40 | 523 | 4.20e-161 | 477 |
| Msa1284170 | AT4G22200.1 | 49.375 | 480 | 234 | 5 | 22 | 495 | 47 | 523 | 6.18e-159 | 479 |
| Msa1284170 | AT4G32650.1 | 39.764 | 679 | 330 | 11 | 15 | 684 | 52 | 660 | 3.30e-148 | 446 |
| Msa1284170 | AT4G32650.3 | 39.764 | 679 | 329 | 12 | 15 | 684 | 52 | 659 | 9.40e-147 | 442 |
| Msa1284170 | AT4G32650.2 | 46.584 | 483 | 250 | 5 | 15 | 491 | 52 | 532 | 5.57e-139 | 420 |
| Msa1284170 | AT3G02850.3 | 36.024 | 508 | 285 | 8 | 15 | 490 | 26 | 525 | 7.74e-93 | 300 |
| Msa1284170 | AT3G02850.2 | 35.882 | 510 | 287 | 8 | 13 | 490 | 24 | 525 | 7.74e-92 | 302 |
| Msa1284170 | AT3G02850.1 | 35.882 | 510 | 287 | 8 | 13 | 490 | 24 | 525 | 4.12e-91 | 302 |
| Msa1284170 | AT5G37500.4 | 35.022 | 454 | 281 | 6 | 38 | 482 | 55 | 503 | 7.08e-83 | 277 |
| Msa1284170 | AT5G37500.1 | 35.022 | 454 | 281 | 6 | 38 | 482 | 55 | 503 | 3.68e-82 | 278 |
| Msa1284170 | AT5G37500.2 | 35.022 | 454 | 281 | 6 | 38 | 482 | 55 | 503 | 4.81e-82 | 278 |
| Msa1284170 | AT5G37500.3 | 34.753 | 446 | 277 | 6 | 46 | 482 | 9 | 449 | 4.09e-79 | 269 |
| Msa1284170 | AT5G57940.1 | 19.748 | 476 | 276 | 12 | 40 | 420 | 88 | 552 | 1.28e-12 | 71.6 |
| Msa1284170 | AT5G57940.2 | 19.748 | 476 | 276 | 12 | 40 | 420 | 88 | 552 | 1.28e-12 | 71.6 |
| Msa1284170 | AT5G57940.3 | 19.748 | 476 | 276 | 12 | 40 | 420 | 81 | 545 | 1.50e-12 | 71.6 |
Find 114 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGACATGCTTCGTTTA+TGG | 0.146203 | 8_3:-26233748 | Msa1284170:CDS |
| TGAACATATAATAGACTTTA+TGG | 0.172466 | 8_3:-26229152 | Msa1284170:CDS |
| ATCTTCTTAGTTTAGTTTCT+TGG | 0.180266 | 8_3:+26234381 | None:intergenic |
| CAAAATTATTGCATAGTAAA+AGG | 0.184100 | 8_3:+26228402 | None:intergenic |
| TACTTGCTCCTAAAGAAATT+TGG | 0.186425 | 8_3:+26229098 | None:intergenic |
| GAGAAAACATACAAAATTTC+TGG | 0.193463 | 8_3:+26232959 | None:intergenic |
| AAAAGATTTGACATTATAAT+TGG | 0.201416 | 8_3:+26230031 | None:intergenic |
| GGTCAAGAAGATTTAGGTTT+TGG | 0.233837 | 8_3:-26229421 | Msa1284170:CDS |
| GAAAATCTTGTGAAACTCTT+TGG | 0.257211 | 8_3:+26230804 | None:intergenic |
| TAAAATTTGTGAAAGCTCTT+TGG | 0.273667 | 8_3:+26230108 | None:intergenic |
| ATTACATAAAATCTCATTAA+TGG | 0.275482 | 8_3:-26228440 | Msa1284170:three_prime_UTR |
| ACATTCGCTGGAATTACTTT+TGG | 0.276372 | 8_3:-26233454 | Msa1284170:CDS |
| ATTATAATTGGTGCTGCTTC+TGG | 0.277918 | 8_3:+26230043 | None:intergenic |
| TTAAGTGGTCAAGAAGATTT+AGG | 0.282480 | 8_3:-26229427 | Msa1284170:CDS |
| ACCGATCATAGCAGCGAGTT+TGG | 0.288257 | 8_3:-26233779 | Msa1284170:CDS |
| AGGAGTGACCAAATTTCTTT+AGG | 0.296498 | 8_3:-26229106 | Msa1284170:CDS |
| GAAGATACATTTGGAGAGAT+TGG | 0.307981 | 8_3:-26230169 | Msa1284170:CDS |
| ATGCTTGCGCGAATTGCTTT+TGG | 0.309205 | 8_3:+26230872 | None:intergenic |
| TGTAGCATAACATCTACTTT+AGG | 0.324139 | 8_3:+26230640 | None:intergenic |
| ATTGTTTCTTTCAATTCCTT+TGG | 0.325775 | 8_3:+26228329 | None:intergenic |
| TCTTTCTGTTTCCATCTAAC+AGG | 0.326795 | 8_3:+26229226 | None:intergenic |
| AGACTCATTTCCTTAAAATC+AGG | 0.330725 | 8_3:+26233170 | None:intergenic |
| TCTGAATTTAGTATTATTGT+AGG | 0.333982 | 8_3:+26228594 | None:intergenic |
| GCTGCTATGATCGGTGAATA+TGG | 0.336774 | 8_3:+26233787 | None:intergenic |
| CAAAACAAGAGTGATGAAAA+TGG | 0.341999 | 8_3:-26229187 | Msa1284170:CDS |
| GGATTAACAGCTTACATCAT+TGG | 0.348559 | 8_3:-26233020 | Msa1284170:CDS |
| AAACAGCAAGAAACAATAAA+TGG | 0.355281 | 8_3:-26230899 | Msa1284170:CDS |
| TTTAGTATTATTGTAGGCCT+TGG | 0.358325 | 8_3:+26228600 | None:intergenic |
| ACACTAACTACTACTGGATA+TGG | 0.362568 | 8_3:-26233107 | Msa1284170:CDS |
| ATCATAAGAAAATTGCAAAA+AGG | 0.364458 | 8_3:-26234002 | Msa1284170:intron |
| TGCTTCTGGATTTGCTTGTA+AGG | 0.365673 | 8_3:+26230057 | None:intergenic |
| TGGGTTGATGATTTCCAAAC+TGG | 0.382275 | 8_3:-26234434 | Msa1284170:CDS |
| TATAATTTCTTGCAGGGCTT+GGG | 0.383623 | 8_3:-26234211 | Msa1284170:intron |
| ATCAAACTTGTTGCTAGCTC+TGG | 0.385508 | 8_3:-26228290 | Msa1284170:three_prime_UTR |
| ATAGGTACCATGATTCAAAA+AGG | 0.392543 | 8_3:-26233214 | Msa1284170:CDS |
| TGACAAATCTTGTTGTTCAA+TGG | 0.396179 | 8_3:-26232992 | Msa1284170:CDS |
| AGAAGCTAAGTCCTGTTAGA+TGG | 0.400842 | 8_3:-26229237 | Msa1284170:CDS |
| GAAACTGCAGGAGAAAAGTT+TGG | 0.409163 | 8_3:-26228627 | Msa1284170:intron |
| AGGTAGGATTTCTGCACAAC+AGG | 0.414712 | 8_3:+26230830 | None:intergenic |
| ATCGGTGAATATGGAGCTAA+TGG | 0.417380 | 8_3:+26233796 | None:intergenic |
| TTCTTAGTTTAGTTTCTTGG+TGG | 0.420579 | 8_3:+26234384 | None:intergenic |
| ATCATAGATAACATTGTGAA+TGG | 0.421566 | 8_3:-26234099 | Msa1284170:CDS |
| TTAACTATTTACTTGCAGAT+AGG | 0.425817 | 8_3:-26233232 | Msa1284170:CDS |
| GATCTCATTCGCAGTGTTGA+TGG | 0.426673 | 8_3:-26230484 | Msa1284170:CDS |
| ACTGGTATCTTGCCATCTCT+TGG | 0.429334 | 8_3:-26234416 | Msa1284170:CDS |
| AGCAGCTCATCCAATGAATC+AGG | 0.431556 | 8_3:+26228962 | None:intergenic |
| TGGTTACATGTTGTTCAACT+TGG | 0.433602 | 8_3:-26233042 | Msa1284170:CDS |
| ATTGTGACACTAACTACTAC+TGG | 0.443572 | 8_3:-26233113 | Msa1284170:CDS |
| GATTAACAGCTTACATCATT+GGG | 0.443824 | 8_3:-26233019 | Msa1284170:CDS |
| GGCAGAAAAGCAAATTGAAA+GGG | 0.444608 | 8_3:+26234144 | None:intergenic |
| GATCTTTACATGTTGGTCTC+AGG | 0.445899 | 8_3:-26230601 | Msa1284170:CDS |
| CAGATAACCTTAGCCATGTT+AGG | 0.447586 | 8_3:-26229126 | Msa1284170:CDS |
| AGCAACAACCATTCACTGTT+AGG | 0.451928 | 8_3:-26230132 | Msa1284170:CDS |
| GCAAGTGCAGAAGATACATT+TGG | 0.454936 | 8_3:-26230178 | Msa1284170:CDS |
| TTCTAGTGCTTTACTCTGCA+TGG | 0.457513 | 8_3:-26234173 | Msa1284170:CDS |
| TCTTTGGTCCTAACAGTGAA+TGG | 0.484058 | 8_3:+26230124 | None:intergenic |
| GATGAGCTGCTCAAGATTGT+TGG | 0.491676 | 8_3:-26228950 | Msa1284170:intron |
| TCTTATGATCATCAATAAGA+AGG | 0.495380 | 8_3:+26234016 | None:intergenic |
| CTTGCAGGGCTTGGGACAAG+TGG | 0.496211 | 8_3:-26234203 | Msa1284170:intron |
| ACCAACATGTAAAGATCTGT+TGG | 0.501060 | 8_3:+26230607 | None:intergenic |
| GAGATGGCAAGATACCAGTT+TGG | 0.505157 | 8_3:+26234420 | None:intergenic |
| GGTTACATGTTGTTCAACTT+GGG | 0.505816 | 8_3:-26233041 | Msa1284170:CDS |
| GATATGTGATAGCAATGTAT+TGG | 0.506357 | 8_3:-26233139 | Msa1284170:CDS |
| TACCAGTAATTTCGATCGAA+GGG | 0.507573 | 8_3:+26234347 | None:intergenic |
| ATTTCAGGTACCTATGTACC+TGG | 0.507746 | 8_3:-26233856 | Msa1284170:intron |
| CAGGAGATGTTGTTTGACAT+TGG | 0.512200 | 8_3:-26233062 | Msa1284170:CDS |
| CTTGTGAAACTCTTTGGAAG+AGG | 0.512428 | 8_3:+26230810 | None:intergenic |
| TCCAAACTCGCTGCTATGAT+CGG | 0.522570 | 8_3:+26233778 | None:intergenic |
| GTCTTGTCCTACATAGTGAA+TGG | 0.526427 | 8_3:+26229027 | None:intergenic |
| AATCTATTGACATATGAGAA+TGG | 0.530668 | 8_3:+26234470 | None:intergenic |
| TTGTTTGCAGTACACTGTGC+TGG | 0.530735 | 8_3:-26233260 | Msa1284170:CDS |
| CAAAGATAAACCAGGTACAT+AGG | 0.535059 | 8_3:+26233846 | None:intergenic |
| TCATCTACCTCATGAGACTC+AGG | 0.536332 | 8_3:-26230969 | Msa1284170:CDS |
| GACTCATTTCCTTAAAATCA+GGG | 0.537535 | 8_3:+26233171 | None:intergenic |
| CATCAATAAGAAGGTAGGAA+TGG | 0.538204 | 8_3:+26234025 | None:intergenic |
| AGGCAGAAAAGCAAATTGAA+AGG | 0.539988 | 8_3:+26234143 | None:intergenic |
| ACCAAGTTACAAGGAAAACA+TGG | 0.541288 | 8_3:-26229001 | Msa1284170:CDS |
| GGTCACTCCTAACATGGCTA+AGG | 0.542535 | 8_3:+26229119 | None:intergenic |
| TACTTTAGGTGGAAAATACT+CGG | 0.543086 | 8_3:+26230654 | None:intergenic |
| TCATGAAGAGACAATCTAGT+AGG | 0.544174 | 8_3:+26229391 | None:intergenic |
| TGAAACTCTTTGGAAGAGGT+AGG | 0.544474 | 8_3:+26230814 | None:intergenic |
| CAAGACAGAACCAAGTTACA+AGG | 0.545091 | 8_3:-26229010 | Msa1284170:CDS |
| AGAGTTACCATTCACTATGT+AGG | 0.549174 | 8_3:-26229034 | Msa1284170:CDS |
| TGTCTGAAGTTCAAAACAGA+AGG | 0.549518 | 8_3:-26230926 | Msa1284170:CDS |
| AGCATAACATCTACTTTAGG+TGG | 0.555493 | 8_3:+26230643 | None:intergenic |
| ATGATCATCAATAAGAAGGT+AGG | 0.555706 | 8_3:+26234020 | None:intergenic |
| TTACCAGTAATTTCGATCGA+AGG | 0.556205 | 8_3:+26234346 | None:intergenic |
| AGCACAGTGTACTGCAAACA+AGG | 0.557730 | 8_3:+26233262 | None:intergenic |
| CATAATGAATGCACAACCAA+AGG | 0.564845 | 8_3:-26228345 | Msa1284170:three_prime_UTR |
| TGGACTCTTGCTCCAAGAGA+TGG | 0.566319 | 8_3:+26234404 | None:intergenic |
| CAAGTAACCATCAAATCGAA+AGG | 0.584455 | 8_3:-26229081 | Msa1284170:CDS |
| CATGTTGGTCTCAGGATCAG+TGG | 0.587170 | 8_3:-26230593 | Msa1284170:intron |
| TCCAACAGATCTTTACATGT+TGG | 0.587974 | 8_3:-26230608 | Msa1284170:CDS |
| GACCTTTGTGTCATTCGAGA+CGG | 0.589584 | 8_3:-26228555 | Msa1284170:CDS |
| GAGTCAGTTCTCTCTTTGCA+AGG | 0.598149 | 8_3:-26233715 | Msa1284170:intron |
| GAGAAAAGTTTGGAGGGCCA+AGG | 0.600290 | 8_3:-26228617 | Msa1284170:CDS |
| TGAAGAGACAATCTAGTAGG+TGG | 0.607924 | 8_3:+26229394 | None:intergenic |
| AAATTTGGTCACTCCTAACA+TGG | 0.608000 | 8_3:+26229113 | None:intergenic |
| CTGCAGGAGAAAAGTTTGGA+GGG | 0.609739 | 8_3:-26228623 | Msa1284170:intron |
| TTGTCTCTTCATGACATACA+TGG | 0.609853 | 8_3:-26229382 | Msa1284170:CDS |
| CCAGTAATTTCGATCGAAGG+GGG | 0.626921 | 8_3:+26234349 | None:intergenic |
| ACTGCAGGAGAAAAGTTTGG+AGG | 0.631832 | 8_3:-26228624 | Msa1284170:intron |
| TTTGCATGCTAATAACACTC+AGG | 0.636938 | 8_3:-26233081 | Msa1284170:CDS |
| ATGGAGCTAATGGTTTGAAG+AGG | 0.639706 | 8_3:+26233806 | None:intergenic |
| ACCAGTAATTTCGATCGAAG+GGG | 0.648047 | 8_3:+26234348 | None:intergenic |
| GCAGAAAAGCAAATTGAAAG+GGG | 0.652733 | 8_3:+26234145 | None:intergenic |
| CACCGTCTCGAATGACACAA+AGG | 0.661055 | 8_3:+26228553 | None:intergenic |
| ATACTCGGTTCACGTGTGAG+TGG | 0.661841 | 8_3:-26228204 | Msa1284170:three_prime_UTR |
| ATTTGATCCTGAGTCTCATG+AGG | 0.664584 | 8_3:+26230962 | None:intergenic |
| CCAAGTTACAAGGAAAACAT+GGG | 0.667847 | 8_3:-26229000 | Msa1284170:CDS |
| TCTCTTCATGACATACATGG+TGG | 0.688736 | 8_3:-26229379 | Msa1284170:CDS |
| TCGATGCTTAAAGCTCATTG+CGG | 0.713010 | 8_3:-26233429 | Msa1284170:intron |
| ACAAACATCAAAGATAAACC+AGG | 0.718745 | 8_3:+26233838 | None:intergenic |
| TACATGGTGGAAACAACACA+AGG | 0.729516 | 8_3:-26229366 | Msa1284170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTATTTTATTTT+TGG | + | chr8_3:26231021-26231040 | None:intergenic | 0.0% |
| !!! | CTTTATGTTTTTTTTTTTTT+TGG | - | chr8_3:26230474-26230493 | Msa1284170:CDS | 10.0% |
| !!! | TTAATAGTATATTTTGAAAT+TGG | - | chr8_3:26230708-26230727 | Msa1284170:intron | 10.0% |
| !! | TTTATTACTTACATTATTAT+TGG | - | chr8_3:26231929-26231948 | Msa1284170:intron | 10.0% |
| !! | TAATCTTTAAATTCATAAAA+AGG | + | chr8_3:26232268-26232287 | None:intergenic | 10.0% |
| !! | TATATAATATAATTTCTTGC+AGG | - | chr8_3:26228466-26228485 | Msa1284170:three_prime_UTR | 15.0% |
| !! | ATATAATATAATTTCTTGCA+GGG | - | chr8_3:26228467-26228486 | Msa1284170:three_prime_UTR | 15.0% |
| !! | AAATAAATAACATAGTAAAG+TGG | + | chr8_3:26228719-26228738 | None:intergenic | 15.0% |
| !!! | TTCATTTTATTAATTCTACA+AGG | + | chr8_3:26228745-26228764 | None:intergenic | 15.0% |
| !! | ATATAAAACCAAAAATAGAA+AGG | + | chr8_3:26229295-26229314 | None:intergenic | 15.0% |
| !! | TTTATATATGTTCTTTCTAA+CGG | - | chr8_3:26229308-26229327 | Msa1284170:CDS | 15.0% |
| !! | AAAATATAACTTTACATAGT+TGG | - | chr8_3:26230023-26230042 | Msa1284170:intron | 15.0% |
| !!! | ATTTTTTTTAACCTCAAATA+TGG | - | chr8_3:26230656-26230675 | Msa1284170:CDS | 15.0% |
| !!! | TTTTAAATATACCATATTTG+AGG | + | chr8_3:26230670-26230689 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTTTGTTTTTTGA+AGG | + | chr8_3:26230960-26230979 | None:intergenic | 15.0% |
| !!! | ATCAACTATCAATATTATTT+TGG | + | chr8_3:26231224-26231243 | None:intergenic | 15.0% |
| !! | AGAAACTATTTGATTAAAAT+TGG | + | chr8_3:26231346-26231365 | None:intergenic | 15.0% |
| !! | ATTGAGTTCTTAAATATATA+CGG | + | chr8_3:26231566-26231585 | None:intergenic | 15.0% |
| !! | AAAAGATTTGACATTATAAT+TGG | + | chr8_3:26232656-26232675 | None:intergenic | 15.0% |
| !!! | TATAATGTCAAATCTTTTTA+TGG | - | chr8_3:26232658-26232677 | Msa1284170:intron | 15.0% |
| !!! | TTAAATTTTACATGATTAGT+TGG | + | chr8_3:26233982-26234001 | None:intergenic | 15.0% |
| !! | ATTACATAAAATCTCATTAA+TGG | - | chr8_3:26234244-26234263 | Msa1284170:intron | 15.0% |
| !!! | TTTATTCCAATTTTTCATTT+AGG | + | chr8_3:26234460-26234479 | None:intergenic | 15.0% |
| !! | AAAAATTGGAATAAAATACT+CGG | - | chr8_3:26234465-26234484 | Msa1284170:CDS | 15.0% |
| !!! | ATAGATTTTTCAAGATGTTT+TGG | - | chr8_3:26228230-26228249 | Msa1284170:three_prime_UTR | 20.0% |
| !!! | TAGATTTTTCAAGATGTTTT+GGG | - | chr8_3:26228231-26228250 | Msa1284170:three_prime_UTR | 20.0% |
| !! | ATCATAAGAAAATTGCAAAA+AGG | - | chr8_3:26228682-26228701 | Msa1284170:intron | 20.0% |
| !!! | GACAAGAATTATTTTTTTCT+TGG | - | chr8_3:26228789-26228808 | Msa1284170:intron | 20.0% |
| !!! | TTGTGATTTAAAACAATGTT+TGG | + | chr8_3:26229034-26229053 | None:intergenic | 20.0% |
| !!! | CAGTTTTAAATAAAGTTATG+CGG | + | chr8_3:26229149-26229168 | None:intergenic | 20.0% |
| !!! | TCTATAATCCTTTCTATTTT+TGG | - | chr8_3:26229284-26229303 | Msa1284170:CDS | 20.0% |
| !!! | TAATAATTGATTCTTCGAAT+AGG | + | chr8_3:26229341-26229360 | None:intergenic | 20.0% |
| !! | GAAACATTTCAAATTCTAAT+TGG | + | chr8_3:26229376-26229395 | None:intergenic | 20.0% |
| !!! | CTATATAAAAAGCATAAGTA+AGG | + | chr8_3:26229753-26229772 | None:intergenic | 20.0% |
| !! | TATATGTCTAAATATGTTAG+CGG | + | chr8_3:26229942-26229961 | None:intergenic | 20.0% |
| !! | AATATTTATTCTGTCTATTG+CGG | + | chr8_3:26230099-26230118 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTTTTTGAAGG+AGG | + | chr8_3:26230957-26230976 | None:intergenic | 20.0% |
| !!! | TCCAAATTTATTTTCCAATT+GGG | - | chr8_3:26231125-26231144 | Msa1284170:intron | 20.0% |
| !!! | TTGCTTAAATTTTAAGTCAT+CGG | + | chr8_3:26231529-26231548 | None:intergenic | 20.0% |
| !! | ATATTGGTAAGATCTTTAAT+AGG | + | chr8_3:26231595-26231614 | None:intergenic | 20.0% |
| !! | ATTAAGTAGGATTGTAATAT+TGG | + | chr8_3:26231611-26231630 | None:intergenic | 20.0% |
| !!! | GAATAAACTATTGGTTTTTA+TGG | - | chr8_3:26231646-26231665 | Msa1284170:intron | 20.0% |
| !! | ATAAGTAACTTTGTAACAAT+AGG | - | chr8_3:26231992-26232011 | Msa1284170:intron | 20.0% |
| !! | ATTTAAAGATTATGCATCAA+TGG | - | chr8_3:26232276-26232295 | Msa1284170:intron | 20.0% |
| !! | AAAAGTGAAGGATTATATTT+CGG | + | chr8_3:26232816-26232835 | None:intergenic | 20.0% |
| !! | TATATTTCCGAATGTAAAAA+TGG | - | chr8_3:26233091-26233110 | Msa1284170:CDS | 20.0% |
| !!! | TTTCTCTAATTCAAGTTTTT+TGG | + | chr8_3:26233122-26233141 | None:intergenic | 20.0% |
| !! | AAACTTGAATTAGAGAAAAT+AGG | - | chr8_3:26233124-26233143 | Msa1284170:CDS | 20.0% |
| !! | AATTGACAAAAAATTCACAT+GGG | - | chr8_3:26233357-26233376 | Msa1284170:intron | 20.0% |
| !! | TGAACATATAATAGACTTTA+TGG | - | chr8_3:26233532-26233551 | Msa1284170:intron | 20.0% |
| !! | TCTGAATTTAGTATTATTGT+AGG | + | chr8_3:26234093-26234112 | None:intergenic | 20.0% |
| !! | CAAAATTATTGCATAGTAAA+AGG | + | chr8_3:26234285-26234304 | None:intergenic | 20.0% |
| ! | AATCTATTGACATATGAGAA+TGG | + | chr8_3:26228217-26228236 | None:intergenic | 25.0% |
| !! | ATCTTCTTAGTTTAGTTTCT+TGG | + | chr8_3:26228306-26228325 | None:intergenic | 25.0% |
| ! | ATCATAGATAACATTGTGAA+TGG | - | chr8_3:26228585-26228604 | Msa1284170:CDS | 25.0% |
| ! | TCTTATGATCATCAATAAGA+AGG | + | chr8_3:26228671-26228690 | None:intergenic | 25.0% |
| !! | TCCATAAAAACTTTGATTTC+AGG | - | chr8_3:26228813-26228832 | Msa1284170:intron | 25.0% |
| !! | ACCTGAAATCAAAGTTTTTA+TGG | + | chr8_3:26228817-26228836 | None:intergenic | 25.0% |
| !! | GACTTTTGATCAAATTTTTC+AGG | - | chr8_3:26229396-26229415 | Msa1284170:CDS | 25.0% |
| ! | TTAACTATTTACTTGCAGAT+AGG | - | chr8_3:26229452-26229471 | Msa1284170:intron | 25.0% |
| !!! | ATTTTAAGGAAATGAGTCTT+TGG | - | chr8_3:26229518-26229537 | Msa1284170:intron | 25.0% |
| !!! | TTTTAAGGAAATGAGTCTTT+GGG | - | chr8_3:26229519-26229538 | Msa1284170:intron | 25.0% |
| ! | GAGAAAACATACAAAATTTC+TGG | + | chr8_3:26229728-26229747 | None:intergenic | 25.0% |
| ! | ATCTTGCCTAAATACTTAAT+TGG | - | chr8_3:26229882-26229901 | Msa1284170:intron | 25.0% |
| ! | TCTTGCCTAAATACTTAATT+GGG | - | chr8_3:26229883-26229902 | Msa1284170:intron | 25.0% |
| ! | AAAGACCCAATTAAGTATTT+AGG | + | chr8_3:26229891-26229910 | None:intergenic | 25.0% |
| ! | ATATGTCTAAATATGTTAGC+GGG | + | chr8_3:26229941-26229960 | None:intergenic | 25.0% |
| ! | AGATGTTGAATCATATTTCA+CGG | + | chr8_3:26229999-26230018 | None:intergenic | 25.0% |
| ! | ATATTTATTCTGTCTATTGC+GGG | + | chr8_3:26230098-26230117 | None:intergenic | 25.0% |
| ! | ATTGCAGATATTAATACTCT+AGG | - | chr8_3:26230171-26230190 | Msa1284170:CDS | 25.0% |
| ! | ATTATATATATGTTGGTCGT+GGG | + | chr8_3:26230208-26230227 | None:intergenic | 25.0% |
| ! | TATTATATATATGTTGGTCG+TGG | + | chr8_3:26230209-26230228 | None:intergenic | 25.0% |
| ! | AGCAAGTGATGTAAATTTAT+TGG | - | chr8_3:26230369-26230388 | Msa1284170:intron | 25.0% |
| !!! | AATCCTATTCATTTTTGAGA+GGG | - | chr8_3:26230396-26230415 | Msa1284170:intron | 25.0% |
| !! | CATTTTCCTTAGAATAAATC+CGG | - | chr8_3:26230529-26230548 | Msa1284170:intron | 25.0% |
| !!! | GTCCAAATTTATTTTCCAAT+TGG | - | chr8_3:26231124-26231143 | Msa1284170:intron | 25.0% |
| !!! | CCAAATTTATTTTCCAATTG+GGG | - | chr8_3:26231126-26231145 | Msa1284170:intron | 25.0% |
| ! | GTCGTTATGAACTTATAATA+TGG | + | chr8_3:26231160-26231179 | None:intergenic | 25.0% |
| ! | TATTATAAGTTCATAACGAC+TGG | - | chr8_3:26231160-26231179 | Msa1284170:intron | 25.0% |
| ! | ATTTGTCACGTTTACTTTAA+AGG | + | chr8_3:26231377-26231396 | None:intergenic | 25.0% |
| !! | GAGTTTTCTAAATGACAAAA+AGG | + | chr8_3:26231463-26231482 | None:intergenic | 25.0% |
| ! | TAGAGTGAAGAAAATTAAGT+AGG | + | chr8_3:26231624-26231643 | None:intergenic | 25.0% |
| ! | CACTCTAATGAATAAACTAT+TGG | - | chr8_3:26231637-26231656 | Msa1284170:intron | 25.0% |
| ! | AAACAGCAAGAAACAATAAA+TGG | - | chr8_3:26231785-26231804 | Msa1284170:intron | 25.0% |
| !! | ACAAGATTTTCTATTTCAAC+TGG | - | chr8_3:26231892-26231911 | Msa1284170:intron | 25.0% |
| ! | CCTTGTAATAGATAACAATA+AGG | + | chr8_3:26231966-26231985 | None:intergenic | 25.0% |
| ! | CCTTATTGTTATCTATTACA+AGG | - | chr8_3:26231963-26231982 | Msa1284170:intron | 25.0% |
| ! | AACCTGAATTATTCATGTTA+GGG | + | chr8_3:26232477-26232496 | None:intergenic | 25.0% |
| ! | AAACCTGAATTATTCATGTT+AGG | + | chr8_3:26232478-26232497 | None:intergenic | 25.0% |
| !!! | AATAATTCAGGTTTTGATGA+AGG | - | chr8_3:26232484-26232503 | Msa1284170:intron | 25.0% |
| ! | TAAAATTTGTGAAAGCTCTT+TGG | + | chr8_3:26232579-26232598 | None:intergenic | 25.0% |
| !! | AAGAGCTTTCACAAATTTTA+AGG | - | chr8_3:26232579-26232598 | Msa1284170:intron | 25.0% |
| !! | TCTGAAATGTTAAAAAGTGA+AGG | + | chr8_3:26232828-26232847 | None:intergenic | 25.0% |
| ! | AAGATAAGCTATAAATTTGG+TGG | + | chr8_3:26232862-26232881 | None:intergenic | 25.0% |
| ! | GGAAAGATAAGCTATAAATT+TGG | + | chr8_3:26232865-26232884 | None:intergenic | 25.0% |
| ! | AATATTCAACATTACACATC+AGG | + | chr8_3:26232886-26232905 | None:intergenic | 25.0% |
| ! | TGTAATGTTGAATATTGAGT+TGG | - | chr8_3:26232890-26232909 | Msa1284170:intron | 25.0% |
| !!! | TGTTAATTTGTGAAGTTGAT+CGG | + | chr8_3:26233016-26233035 | None:intergenic | 25.0% |
| ! | TATAGTCTCTTGTAGAAAAA+AGG | - | chr8_3:26233190-26233209 | Msa1284170:CDS | 25.0% |
| ! | ATAGTCTCTTGTAGAAAAAA+GGG | - | chr8_3:26233191-26233210 | Msa1284170:CDS | 25.0% |
| !!! | TTTGTTGTTTATTTTGACAG+AGG | - | chr8_3:26233234-26233253 | Msa1284170:CDS | 25.0% |
| ! | GAATTGACAAAAAATTCACA+TGG | - | chr8_3:26233356-26233375 | Msa1284170:intron | 25.0% |
| ! | ATTGACAAAAAATTCACATG+GGG | - | chr8_3:26233358-26233377 | Msa1284170:intron | 25.0% |
| !! | TTTTCATTTGCTTCTTTTTC+TGG | + | chr8_3:26233428-26233447 | None:intergenic | 25.0% |
| !! | GATAATTTTACCTGATTCAT+TGG | - | chr8_3:26233712-26233731 | Msa1284170:intron | 25.0% |
| ! | TATTTGACAGAATGTTTAAG+TGG | + | chr8_3:26233767-26233786 | None:intergenic | 25.0% |
| !! | TACTCTTTTGTAAATAATGC+CGG | - | chr8_3:26233785-26233804 | Msa1284170:CDS | 25.0% |
| !! | ATTGTTTCTTTCAATTCCTT+TGG | + | chr8_3:26234358-26234377 | None:intergenic | 25.0% |
| ! | TGCTAACCTAAATGAAAAAT+TGG | - | chr8_3:26234451-26234470 | Msa1284170:CDS | 25.0% |
| ! | TTCTTAGTTTAGTTTCTTGG+TGG | + | chr8_3:26228303-26228322 | None:intergenic | 30.0% |
| ATGATCATCAATAAGAAGGT+AGG | + | chr8_3:26228667-26228686 | None:intergenic | 30.0% | |
| ACAAACATCAAAGATAAACC+AGG | + | chr8_3:26228849-26228868 | None:intergenic | 30.0% | |
| ATATATGTTCTTTCTAACGG+AGG | - | chr8_3:26229311-26229330 | Msa1284170:CDS | 30.0% | |
| ATAGGTACCATGATTCAAAA+AGG | - | chr8_3:26229470-26229489 | Msa1284170:intron | 30.0% | |
| GACTCATTTCCTTAAAATCA+GGG | + | chr8_3:26229516-26229535 | None:intergenic | 30.0% | |
| AGACTCATTTCCTTAAAATC+AGG | + | chr8_3:26229517-26229536 | None:intergenic | 30.0% | |
| GATATGTGATAGCAATGTAT+TGG | - | chr8_3:26229545-26229564 | Msa1284170:intron | 30.0% | |
| GATTAACAGCTTACATCATT+GGG | - | chr8_3:26229665-26229684 | Msa1284170:intron | 30.0% | |
| !! | TGACAAATCTTGTTGTTCAA+TGG | - | chr8_3:26229692-26229711 | Msa1284170:intron | 30.0% |
| AGTAAGATATGATCAAACGT+TGG | + | chr8_3:26229841-26229860 | None:intergenic | 30.0% | |
| ! | GGTCTTTCATAATTTTCTTG+CGG | - | chr8_3:26229904-26229923 | Msa1284170:intron | 30.0% |
| ACTTTACATAGTTGGAACTA+AGG | - | chr8_3:26230031-26230050 | Msa1284170:CDS | 30.0% | |
| TTACAAGTGTTCAACATACT+TGG | + | chr8_3:26230070-26230089 | None:intergenic | 30.0% | |
| CAATTACACACAAACTTGAA+TGG | - | chr8_3:26230143-26230162 | Msa1284170:CDS | 30.0% | |
| TTATATATATGTTGGTCGTG+GGG | + | chr8_3:26230207-26230226 | None:intergenic | 30.0% | |
| !! | GAATCCTATTCATTTTTGAG+AGG | - | chr8_3:26230395-26230414 | Msa1284170:intron | 30.0% |
| ! | TGTTACTTAATGCACTAAGT+AGG | + | chr8_3:26230511-26230530 | None:intergenic | 30.0% |
| !! | TCGTGGTTAACTTGTATTTA+TGG | + | chr8_3:26230783-26230802 | None:intergenic | 30.0% |
| !!! | CTTTGCTTACTTTTTATTCG+TGG | + | chr8_3:26230800-26230819 | None:intergenic | 30.0% |
| ! | TGGTTACAGTCATAAAGTTT+TGG | + | chr8_3:26230917-26230936 | None:intergenic | 30.0% |
| !! | TTTAATTGCAGGACTGATTT+TGG | + | chr8_3:26230993-26231012 | None:intergenic | 30.0% |
| AAAATCAGTCCTGCAATTAA+AGG | - | chr8_3:26230992-26231011 | Msa1284170:CDS | 30.0% | |
| !!! | TTTTGGTTTCCTTTAATTGC+AGG | + | chr8_3:26231004-26231023 | None:intergenic | 30.0% |
| !!! | ACATTTATTTTGTCGTGTAG+TGG | - | chr8_3:26231047-26231066 | Msa1284170:intron | 30.0% |
| TGGTGGTTTAAATCATTTAG+TGG | - | chr8_3:26231067-26231086 | Msa1284170:intron | 30.0% | |
| GGTGGTTTAAATCATTTAGT+GGG | - | chr8_3:26231068-26231087 | Msa1284170:intron | 30.0% | |
| CCCCAATTGGAAAATAAATT+TGG | + | chr8_3:26231129-26231148 | None:intergenic | 30.0% | |
| !! | TAACTCACATCGATTTAGTT+TGG | + | chr8_3:26231302-26231321 | None:intergenic | 30.0% |
| GAAAATCTTGTGAAACTCTT+TGG | + | chr8_3:26231883-26231902 | None:intergenic | 30.0% | |
| TACTTTAGGTGGAAAATACT+CGG | + | chr8_3:26232033-26232052 | None:intergenic | 30.0% | |
| TGTAGCATAACATCTACTTT+AGG | + | chr8_3:26232047-26232066 | None:intergenic | 30.0% | |
| TACCCTAACATGAATAATTC+AGG | - | chr8_3:26232472-26232491 | Msa1284170:intron | 30.0% | |
| GCAAGTTTGTGAAAAATAAG+AGG | + | chr8_3:26232769-26232788 | None:intergenic | 30.0% | |
| !! | ATGTTGAATATTGAGTTGGT+CGG | - | chr8_3:26232894-26232913 | Msa1284170:intron | 30.0% |
| ATTTCCGAATGTAAAAATGG+AGG | - | chr8_3:26233094-26233113 | Msa1284170:CDS | 30.0% | |
| TTTCCGAATGTAAAAATGGA+GGG | - | chr8_3:26233095-26233114 | Msa1284170:CDS | 30.0% | |
| CTTGAATTAGAGAAAATAGG+AGG | - | chr8_3:26233127-26233146 | Msa1284170:CDS | 30.0% | |
| !!! | TTATTTTGACAGAGGTTAAG+TGG | - | chr8_3:26233242-26233261 | Msa1284170:CDS | 30.0% |
| TTAAGTGGTCAAGAAGATTT+AGG | - | chr8_3:26233257-26233276 | Msa1284170:CDS | 30.0% | |
| TTGACAAAAAATTCACATGG+GGG | - | chr8_3:26233359-26233378 | Msa1284170:intron | 30.0% | |
| CAAAACAAGAGTGATGAAAA+TGG | - | chr8_3:26233497-26233516 | Msa1284170:intron | 30.0% | |
| TACTTGCTCCTAAAGAAATT+TGG | + | chr8_3:26233589-26233608 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCCTTTCGATTTGA+TGG | + | chr8_3:26233613-26233632 | None:intergenic | 30.0% |
| ACGTTTCAACAAAATCACAA+TGG | - | chr8_3:26233900-26233919 | Msa1284170:intron | 30.0% | |
| TTTAGTATTATTGTAGGCCT+TGG | + | chr8_3:26234087-26234106 | None:intergenic | 30.0% | |
| ! | GATCATCTGTATTTTCTTTG+CGG | - | chr8_3:26234153-26234172 | Msa1284170:CDS | 30.0% |
| TACCAGTAATTTCGATCGAA+GGG | + | chr8_3:26228340-26228359 | None:intergenic | 35.0% | |
| TTACCAGTAATTTCGATCGA+AGG | + | chr8_3:26228341-26228360 | None:intergenic | 35.0% | |
| TATTTGAACTCTGTCTCTTG+AGG | - | chr8_3:26228386-26228405 | Msa1284170:three_prime_UTR | 35.0% | |
| ATATAATTTCTTGCAGGGCT+TGG | - | chr8_3:26228472-26228491 | Msa1284170:three_prime_UTR | 35.0% | |
| TATAATTTCTTGCAGGGCTT+GGG | - | chr8_3:26228473-26228492 | Msa1284170:three_prime_UTR | 35.0% | |
| GCAGAAAAGCAAATTGAAAG+GGG | + | chr8_3:26228542-26228561 | None:intergenic | 35.0% | |
| GGCAGAAAAGCAAATTGAAA+GGG | + | chr8_3:26228543-26228562 | None:intergenic | 35.0% | |
| AGGCAGAAAAGCAAATTGAA+AGG | + | chr8_3:26228544-26228563 | None:intergenic | 35.0% | |
| ! | AATAGTGTGTCATGCTTTTC+AGG | + | chr8_3:26228564-26228583 | None:intergenic | 35.0% |
| CATCAATAAGAAGGTAGGAA+TGG | + | chr8_3:26228662-26228681 | None:intergenic | 35.0% | |
| CAAAGATAAACCAGGTACAT+AGG | + | chr8_3:26228841-26228860 | None:intergenic | 35.0% | |
| TTCTTGACATGCTTCGTTTA+TGG | - | chr8_3:26228936-26228955 | Msa1284170:intron | 35.0% | |
| TCTACAACGCGATTAAGTTT+AGG | + | chr8_3:26229090-26229109 | None:intergenic | 35.0% | |
| !! | TAATTTGGGTTGCGAAATCA+AGG | + | chr8_3:26229123-26229142 | None:intergenic | 35.0% |
| AAGTTATGCGGCTGTAATTT+GGG | + | chr8_3:26229137-26229156 | None:intergenic | 35.0% | |
| AAAGTTATGCGGCTGTAATT+TGG | + | chr8_3:26229138-26229157 | None:intergenic | 35.0% | |
| ! | ACATTCGCTGGAATTACTTT+TGG | - | chr8_3:26229230-26229249 | Msa1284170:CDS | 35.0% |
| ACCATGATTCAAAAAGGACA+TGG | - | chr8_3:26229476-26229495 | Msa1284170:intron | 35.0% | |
| ! | TCCATGTCCTTTTTGAATCA+TGG | + | chr8_3:26229480-26229499 | None:intergenic | 35.0% |
| GATTCAAAAAGGACATGGAT+TGG | - | chr8_3:26229481-26229500 | Msa1284170:intron | 35.0% | |
| ! | TTCAGTGTACCCTGATTTTA+AGG | - | chr8_3:26229504-26229523 | Msa1284170:intron | 35.0% |
| ATTGTGACACTAACTACTAC+TGG | - | chr8_3:26229571-26229590 | Msa1284170:intron | 35.0% | |
| ACACTAACTACTACTGGATA+TGG | - | chr8_3:26229577-26229596 | Msa1284170:intron | 35.0% | |
| TTTGCATGCTAATAACACTC+AGG | - | chr8_3:26229603-26229622 | Msa1284170:intron | 35.0% | |
| TGGTTACATGTTGTTCAACT+TGG | - | chr8_3:26229642-26229661 | Msa1284170:intron | 35.0% | |
| GGTTACATGTTGTTCAACTT+GGG | - | chr8_3:26229643-26229662 | Msa1284170:intron | 35.0% | |
| GGATTAACAGCTTACATCAT+TGG | - | chr8_3:26229664-26229683 | Msa1284170:intron | 35.0% | |
| TTGGAACTAAGGATGACAAT+TGG | - | chr8_3:26230042-26230061 | Msa1284170:CDS | 35.0% | |
| TATATTTATGGGTCCGAGTT+CGG | - | chr8_3:26230119-26230138 | Msa1284170:CDS | 35.0% | |
| CTTCCCTCTCAAAAATGAAT+AGG | + | chr8_3:26230402-26230421 | None:intergenic | 35.0% | |
| TGAGAGGGAAGACTATTTAT+TGG | - | chr8_3:26230411-26230430 | Msa1284170:intron | 35.0% | |
| CAAAGTCCGGATTTATTCTA+AGG | + | chr8_3:26230538-26230557 | None:intergenic | 35.0% | |
| CTTAGAATAAATCCGGACTT+TGG | - | chr8_3:26230536-26230555 | Msa1284170:intron | 35.0% | |
| !!! | TTTATTTTGTCGTGTAGTGG+TGG | - | chr8_3:26231050-26231069 | Msa1284170:intron | 35.0% |
| TGGGTATAACATGGTTCATA+TGG | + | chr8_3:26231095-26231114 | None:intergenic | 35.0% | |
| AAATTTGGACCAATGTCAGT+GGG | + | chr8_3:26231114-26231133 | None:intergenic | 35.0% | |
| TAAATTTGGACCAATGTCAG+TGG | + | chr8_3:26231115-26231134 | None:intergenic | 35.0% | |
| ! | TATTTTCCAATTGGGGAATG+TGG | - | chr8_3:26231133-26231152 | Msa1284170:intron | 35.0% |
| ! | TAACGACTGGTACATGTTTT+TGG | - | chr8_3:26231173-26231192 | Msa1284170:intron | 35.0% |
| !!! | ACTGGTACATGTTTTTGGTA+GGG | - | chr8_3:26231178-26231197 | Msa1284170:intron | 35.0% |
| AAACCAAACCATTGTAGACT+TGG | + | chr8_3:26231252-26231271 | None:intergenic | 35.0% | |
| CGATATTTAAGCAACTCACT+CGG | - | chr8_3:26231432-26231451 | Msa1284170:intron | 35.0% | |
| ! | TGTCTGAAGTTCAAAACAGA+AGG | - | chr8_3:26231758-26231777 | Msa1284170:intron | 35.0% |
| GCACAACAGGATAAAAAAGA+TGG | + | chr8_3:26231844-26231863 | None:intergenic | 35.0% | |
| AGCATAACATCTACTTTAGG+TGG | + | chr8_3:26232044-26232063 | None:intergenic | 35.0% | |
| TCCAACAGATCTTTACATGT+TGG | - | chr8_3:26232076-26232095 | Msa1284170:intron | 35.0% | |
| ACCAACATGTAAAGATCTGT+TGG | + | chr8_3:26232080-26232099 | None:intergenic | 35.0% | |
| GAAGATACATTTGGAGAGAT+TGG | - | chr8_3:26232515-26232534 | Msa1284170:intron | 35.0% | |
| !! | ATTATAATTGGTGCTGCTTC+TGG | + | chr8_3:26232644-26232663 | None:intergenic | 35.0% |
| !! | GGTCAAGAAGATTTAGGTTT+TGG | - | chr8_3:26233263-26233282 | Msa1284170:CDS | 35.0% |
| TCATGAAGAGACAATCTAGT+AGG | + | chr8_3:26233296-26233315 | None:intergenic | 35.0% | |
| TTGTCTCTTCATGACATACA+TGG | - | chr8_3:26233302-26233321 | Msa1284170:intron | 35.0% | |
| !! | GGCTGATTTTCAATCATGTT+AGG | + | chr8_3:26233407-26233426 | None:intergenic | 35.0% |
| TCTTTCTGTTTCCATCTAAC+AGG | + | chr8_3:26233461-26233480 | None:intergenic | 35.0% | |
| AAATTTGGTCACTCCTAACA+TGG | + | chr8_3:26233574-26233593 | None:intergenic | 35.0% | |
| AGGAGTGACCAAATTTCTTT+AGG | - | chr8_3:26233578-26233597 | Msa1284170:intron | 35.0% | |
| CAAGTAACCATCAAATCGAA+AGG | - | chr8_3:26233603-26233622 | Msa1284170:intron | 35.0% | |
| AGAGTTACCATTCACTATGT+AGG | - | chr8_3:26233650-26233669 | Msa1284170:intron | 35.0% | |
| ACCAAGTTACAAGGAAAACA+TGG | - | chr8_3:26233683-26233702 | Msa1284170:intron | 35.0% | |
| CCAAGTTACAAGGAAAACAT+GGG | - | chr8_3:26233684-26233703 | Msa1284170:intron | 35.0% | |
| GTTCAAATGTATAGCGAGTT+TGG | + | chr8_3:26233939-26233958 | None:intergenic | 35.0% | |
| CTATCAATTTGTGAAACTGC+AGG | - | chr8_3:26234045-26234064 | Msa1284170:CDS | 35.0% | |
| CATAATGAATGCACAACCAA+AGG | - | chr8_3:26234339-26234358 | Msa1284170:intron | 35.0% | |
| !! | TGGGTTGATGATTTCCAAAC+TGG | - | chr8_3:26228250-26228269 | Msa1284170:three_prime_UTR | 40.0% |
| ACCAGTAATTTCGATCGAAG+GGG | + | chr8_3:26228339-26228358 | None:intergenic | 40.0% | |
| TTCTAGTGCTTTACTCTGCA+TGG | - | chr8_3:26228511-26228530 | Msa1284170:CDS | 40.0% | |
| ! | ATTTCAGGTACCTATGTACC+TGG | - | chr8_3:26228828-26228847 | Msa1284170:intron | 40.0% |
| ATGGAGCTAATGGTTTGAAG+AGG | + | chr8_3:26228881-26228900 | None:intergenic | 40.0% | |
| ATCGGTGAATATGGAGCTAA+TGG | + | chr8_3:26228891-26228910 | None:intergenic | 40.0% | |
| AGGCTGAAAGAACAAATTCG+AGG | + | chr8_3:26229202-26229221 | None:intergenic | 40.0% | |
| ! | TCCAGCGAATGTTTTTCTCA+AGG | + | chr8_3:26229222-26229241 | None:intergenic | 40.0% |
| TCGATGCTTAAAGCTCATTG+CGG | - | chr8_3:26229255-26229274 | Msa1284170:CDS | 40.0% | |
| ! | CAGGAGATGTTGTTTGACAT+TGG | - | chr8_3:26229622-26229641 | Msa1284170:intron | 40.0% |
| ATATTTATGGGTCCGAGTTC+GGG | - | chr8_3:26230120-26230139 | Msa1284170:CDS | 40.0% | |
| CCTCATATGTAAGATTCACG+CGG | + | chr8_3:26230834-26230853 | None:intergenic | 40.0% | |
| CAATGTCAGTGGGTATAACA+TGG | + | chr8_3:26231104-26231123 | None:intergenic | 40.0% | |
| CATGTTATACCCACTGACAT+TGG | - | chr8_3:26231102-26231121 | Msa1284170:intron | 40.0% | |
| !!! | GACTGGTACATGTTTTTGGT+AGG | - | chr8_3:26231177-26231196 | Msa1284170:intron | 40.0% |
| ! | CAAACCATTGTAGACTTGGT+CGG | + | chr8_3:26231248-26231267 | None:intergenic | 40.0% |
| ! | TGGACAGCTCACATTTTGTT+TGG | + | chr8_3:26231326-26231345 | None:intergenic | 40.0% |
| ATTTGATCCTGAGTCTCATG+AGG | + | chr8_3:26231725-26231744 | None:intergenic | 40.0% | |
| ! | TGAAACTCTTTGGAAGAGGT+AGG | + | chr8_3:26231873-26231892 | None:intergenic | 40.0% |
| ! | CTTGTGAAACTCTTTGGAAG+AGG | + | chr8_3:26231877-26231896 | None:intergenic | 40.0% |
| ! | GATCTTTACATGTTGGTCTC+AGG | - | chr8_3:26232083-26232102 | Msa1284170:intron | 40.0% |
| GCAAGTGCAGAAGATACATT+TGG | - | chr8_3:26232506-26232525 | Msa1284170:intron | 40.0% | |
| AGCAACAACCATTCACTGTT+AGG | - | chr8_3:26232552-26232571 | Msa1284170:intron | 40.0% | |
| TCTTTGGTCCTAACAGTGAA+TGG | + | chr8_3:26232563-26232582 | None:intergenic | 40.0% | |
| ! | TGCTTCTGGATTTGCTTGTA+AGG | + | chr8_3:26232630-26232649 | None:intergenic | 40.0% |
| ! | TGTGAAGTTGATCGGTCATT+AGG | + | chr8_3:26233008-26233027 | None:intergenic | 40.0% |
| !! | GGTCCCTCCATTTTTACATT+CGG | + | chr8_3:26233101-26233120 | None:intergenic | 40.0% |
| TGAAGAGACAATCTAGTAGG+TGG | + | chr8_3:26233293-26233312 | None:intergenic | 40.0% | |
| TCTCTTCATGACATACATGG+TGG | - | chr8_3:26233305-26233324 | Msa1284170:intron | 40.0% | |
| ! | TACATGGTGGAAACAACACA+AGG | - | chr8_3:26233318-26233337 | Msa1284170:intron | 40.0% |
| AGAAGCTAAGTCCTGTTAGA+TGG | - | chr8_3:26233447-26233466 | Msa1284170:CDS | 40.0% | |
| CAGATAACCTTAGCCATGTT+AGG | - | chr8_3:26233558-26233577 | Msa1284170:intron | 40.0% | |
| GTCTTGTCCTACATAGTGAA+TGG | + | chr8_3:26233660-26233679 | None:intergenic | 40.0% | |
| CAAGACAGAACCAAGTTACA+AGG | - | chr8_3:26233674-26233693 | Msa1284170:intron | 40.0% | |
| ! | CCCATGTTTTCCTTGTAACT+TGG | + | chr8_3:26233687-26233706 | None:intergenic | 40.0% |
| TGTAAATAATGCCGGTGTCT+AGG | - | chr8_3:26233793-26233812 | Msa1284170:CDS | 40.0% | |
| ATGAAACTCTACCTAGACAC+CGG | + | chr8_3:26233807-26233826 | None:intergenic | 40.0% | |
| !!! | TGTCGCTTTTGTCAAAATCG+AGG | + | chr8_3:26233875-26233894 | None:intergenic | 40.0% |
| TAGCGAGTTTGGCAAAATCA+CGG | + | chr8_3:26233928-26233947 | None:intergenic | 40.0% | |
| GAAACTGCAGGAGAAAAGTT+TGG | - | chr8_3:26234057-26234076 | Msa1284170:CDS | 40.0% | |
| !! | ATCAAACTTGTTGCTAGCTC+TGG | - | chr8_3:26234394-26234413 | Msa1284170:CDS | 40.0% |
| GAGATGGCAAGATACCAGTT+TGG | + | chr8_3:26228267-26228286 | None:intergenic | 45.0% | |
| ACTGGTATCTTGCCATCTCT+TGG | - | chr8_3:26228268-26228287 | Msa1284170:three_prime_UTR | 45.0% | |
| CCAGTAATTTCGATCGAAGG+GGG | + | chr8_3:26228338-26228357 | None:intergenic | 45.0% | |
| CGTAACACTATGTCGACACA+TGG | - | chr8_3:26228424-26228443 | Msa1284170:three_prime_UTR | 45.0% | |
| GCTGCTATGATCGGTGAATA+TGG | + | chr8_3:26228900-26228919 | None:intergenic | 45.0% | |
| TCCAAACTCGCTGCTATGAT+CGG | + | chr8_3:26228909-26228928 | None:intergenic | 45.0% | |
| GAGTCAGTTCTCTCTTTGCA+AGG | - | chr8_3:26228969-26228988 | Msa1284170:CDS | 45.0% | |
| ATTCGAGGAGCTAGTGAGTA+CGG | + | chr8_3:26229187-26229206 | None:intergenic | 45.0% | |
| GCCTTGAGAAAAACATTCGC+TGG | - | chr8_3:26229218-26229237 | Msa1284170:CDS | 45.0% | |
| AGCACAGTGTACTGCAAACA+AGG | + | chr8_3:26229425-26229444 | None:intergenic | 45.0% | |
| TTGTTTGCAGTACACTGTGC+TGG | - | chr8_3:26229424-26229443 | Msa1284170:CDS | 45.0% | |
| TGTGTGTAATTGCCCGAACT+CGG | + | chr8_3:26230135-26230154 | None:intergenic | 45.0% | |
| ATATATGTTGGTCGTGGGGA+GGG | + | chr8_3:26230203-26230222 | None:intergenic | 45.0% | |
| TATATATGTTGGTCGTGGGG+AGG | + | chr8_3:26230204-26230223 | None:intergenic | 45.0% | |
| GTGATTGAGACTCCAAAGTC+CGG | + | chr8_3:26230551-26230570 | None:intergenic | 45.0% | |
| CCGCGTGAATCTTACATATG+AGG | - | chr8_3:26230831-26230850 | Msa1284170:CDS | 45.0% | |
| AGGCTTGACAACTAGTGACT+TGG | + | chr8_3:26230937-26230956 | None:intergenic | 45.0% | |
| TATGGTCCACATTCCCCAAT+TGG | + | chr8_3:26231142-26231161 | None:intergenic | 45.0% | |
| GATACCGACCAAGTCTACAA+TGG | - | chr8_3:26231241-26231260 | Msa1284170:intron | 45.0% | |
| CGACCAAGTCTACAATGGTT+TGG | - | chr8_3:26231246-26231265 | Msa1284170:intron | 45.0% | |
| TCATCTACCTCATGAGACTC+AGG | - | chr8_3:26231715-26231734 | Msa1284170:intron | 45.0% | |
| ! | ATGCTTGCGCGAATTGCTTT+TGG | + | chr8_3:26231815-26231834 | None:intergenic | 45.0% |
| AGGTAGGATTTCTGCACAAC+AGG | + | chr8_3:26231857-26231876 | None:intergenic | 45.0% | |
| ! | GATCTCATTCGCAGTGTTGA+TGG | - | chr8_3:26232200-26232219 | Msa1284170:intron | 45.0% |
| TGATCGGTCATTAGGTGATG+TGG | + | chr8_3:26233000-26233019 | None:intergenic | 45.0% | |
| AGCAGCTCATCCAATGAATC+AGG | + | chr8_3:26233725-26233744 | None:intergenic | 45.0% | |
| GATGAGCTGCTCAAGATTGT+TGG | - | chr8_3:26233734-26233753 | Msa1284170:CDS | 45.0% | |
| ACTGCAGGAGAAAAGTTTGG+AGG | - | chr8_3:26234060-26234079 | Msa1284170:CDS | 45.0% | |
| CTGCAGGAGAAAAGTTTGGA+GGG | - | chr8_3:26234061-26234080 | Msa1284170:CDS | 45.0% | |
| ! | GACCTTTGTGTCATTCGAGA+CGG | - | chr8_3:26234129-26234148 | Msa1284170:CDS | 45.0% |
| !! | AGAATAAATATTTATATTTA+TGG | - | chr8_3:26230107-26230126 | Msa1284170:CDS | 5.0% |
| !! | GAATAAATATTTATATTTAT+GGG | - | chr8_3:26230108-26230127 | Msa1284170:CDS | 5.0% |
| !! | TATATATATTATATATATGT+TGG | + | chr8_3:26230215-26230234 | None:intergenic | 5.0% |
| !!! | AATAAAAATAAAATTTTTTG+AGG | + | chr8_3:26230338-26230357 | None:intergenic | 5.0% |
| TGGACTCTTGCTCCAAGAGA+TGG | + | chr8_3:26228283-26228302 | None:intergenic | 50.0% | |
| CCCCCTTCGATCGAAATTAC+TGG | - | chr8_3:26228335-26228354 | Msa1284170:three_prime_UTR | 50.0% | |
| ACCGATCATAGCAGCGAGTT+TGG | - | chr8_3:26228905-26228924 | Msa1284170:intron | 50.0% | |
| ! | CATGTTGGTCTCAGGATCAG+TGG | - | chr8_3:26232091-26232110 | Msa1284170:intron | 50.0% |
| GGTCACTCCTAACATGGCTA+AGG | + | chr8_3:26233568-26233587 | None:intergenic | 50.0% | |
| GAGAAAAGTTTGGAGGGCCA+AGG | - | chr8_3:26234067-26234086 | Msa1284170:CDS | 50.0% | |
| CACCGTCTCGAATGACACAA+AGG | + | chr8_3:26234134-26234153 | None:intergenic | 50.0% | |
| ATACTCGGTTCACGTGTGAG+TGG | - | chr8_3:26234480-26234499 | Msa1284170:exon | 50.0% | |
| CTTGCAGGGCTTGGGACAAG+TGG | - | chr8_3:26228481-26228500 | Msa1284170:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 26228199 | 26234507 | 26228199 | ID=Msa1284170;Name=Msa1284170 |
| chr8_3 | mRNA | 26228199 | 26234507 | 26228199 | ID=Msa1284170-mRNA-1;Parent=Msa1284170;Name=Msa1284170-mRNA-1;_AED=0.08;_eAED=0.08;_QI=12|1|1|1|1|1|11|310|694 |
| chr8_3 | exon | 26228199 | 26228639 | 26228199 | ID=Msa1284170-mRNA-1:exon:9138;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26228951 | 26229452 | 26228951 | ID=Msa1284170-mRNA-1:exon:9137;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26230027 | 26230212 | 26230027 | ID=Msa1284170-mRNA-1:exon:9136;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26230474 | 26230506 | 26230474 | ID=Msa1284170-mRNA-1:exon:9135;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26230594 | 26230692 | 26230594 | ID=Msa1284170-mRNA-1:exon:9134;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26230793 | 26231032 | 26230793 | ID=Msa1284170-mRNA-1:exon:9133;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26232971 | 26233288 | 26232971 | ID=Msa1284170-mRNA-1:exon:9132;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26233430 | 26233487 | 26233430 | ID=Msa1284170-mRNA-1:exon:9131;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26233716 | 26233871 | 26233716 | ID=Msa1284170-mRNA-1:exon:9130;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26234003 | 26234218 | 26234003 | ID=Msa1284170-mRNA-1:exon:9129;Parent=Msa1284170-mRNA-1 |
| chr8_3 | exon | 26234350 | 26234507 | 26234350 | ID=Msa1284170-mRNA-1:exon:9128;Parent=Msa1284170-mRNA-1 |
| chr8_3 | five_prime_UTR | 26234496 | 26234507 | 26234496 | ID=Msa1284170-mRNA-1:five_prime_utr;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26234350 | 26234495 | 26234350 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26234003 | 26234218 | 26234003 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26233716 | 26233871 | 26233716 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26233430 | 26233487 | 26233430 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26232971 | 26233288 | 26232971 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26230793 | 26231032 | 26230793 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26230594 | 26230692 | 26230594 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26230474 | 26230506 | 26230474 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26230027 | 26230212 | 26230027 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26228951 | 26229452 | 26228951 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | CDS | 26228509 | 26228639 | 26228509 | ID=Msa1284170-mRNA-1:cds;Parent=Msa1284170-mRNA-1 |
| chr8_3 | three_prime_UTR | 26228199 | 26228508 | 26228199 | ID=Msa1284170-mRNA-1:three_prime_utr;Parent=Msa1284170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
