AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433650 MtrunA17_Chr4g0060721 98.503 334 5 0 1 334 1 334 0.0 689
Msa1433650 MtrunA17_Chr3g0092401 56.232 345 106 10 1 334 1 311 2.40e-122 354
Msa1433650 MtrunA17_Chr6g0453211 53.374 326 129 8 2 321 1 309 4.64e-106 313
Msa1433650 MtrunA17_Chr7g0217221 64.378 233 56 4 2 221 1 219 1.99e-101 299
Msa1433650 MtrunA17_Chr7g0254411 60.714 224 56 4 2 224 1 193 1.86e-82 253
Msa1433650 MtrunA17_Chr7g0217741 54.819 166 64 3 2 156 1 166 2.92e-60 195
Msa1433650 MtrunA17_Chr6g0453471 44.889 225 90 6 2 210 1 207 4.20e-60 196
Msa1433650 MtrunA17_Chr4g0039971 46.829 205 102 2 1 200 1 203 8.15e-59 193
Msa1433650 MtrunA17_Chr1g0203411 66.949 118 39 0 2 119 1 118 4.04e-58 189
Msa1433650 MtrunA17_Chr1g0187761 66.116 121 41 0 2 122 1 121 9.87e-58 187
Msa1433650 MtrunA17_Chr8g0346561 58.209 134 56 0 2 135 1 134 8.72e-57 186
Msa1433650 MtrunA17_Chr2g0323411 65.517 116 40 0 2 117 1 116 9.48e-57 187
Msa1433650 MtrunA17_Chr4g0068061 68.103 116 37 0 2 117 1 116 1.21e-56 187
Msa1433650 MtrunA17_Chr3g0115821 67.241 116 38 0 2 117 1 116 4.01e-56 186
Msa1433650 MtrunA17_Chr4g0042671 66.102 118 40 0 2 119 1 118 6.80e-56 187
Msa1433650 MtrunA17_Chr2g0281071 66.667 117 38 1 2 117 1 117 1.65e-54 181
Msa1433650 MtrunA17_Chr1g0167661 64.655 116 41 0 2 117 1 116 5.73e-54 177
Msa1433650 MtrunA17_Chr7g0261281 61.667 120 46 0 2 121 1 120 5.93e-54 178
Msa1433650 MtrunA17_Chr7g0274581 58.537 123 51 0 2 124 1 123 6.06e-54 176
Msa1433650 MtrunA17_Chr4g0037141 48.913 184 85 4 2 183 1 177 7.14e-54 178
Msa1433650 MtrunA17_Chr8g0349261 66.102 118 38 2 2 117 1 118 1.23e-53 178
Msa1433650 MtrunA17_Chr1g0167691 64.655 116 41 0 2 117 1 116 1.24e-53 176
Msa1433650 MtrunA17_Chr7g0275911 61.157 121 46 1 2 121 1 121 2.02e-53 176
Msa1433650 MtrunA17_Chr4g0048511 64.957 117 40 1 2 117 1 117 2.45e-53 179
Msa1433650 MtrunA17_Chr5g0410961 58.015 131 49 1 2 132 1 125 6.20e-53 177
Msa1433650 MtrunA17_Chr3g0110351 62.712 118 44 0 2 119 1 118 3.88e-52 174
Msa1433650 MtrunA17_Chr5g0434571 62.185 119 45 0 1 119 36 154 4.99e-52 175
Msa1433650 MtrunA17_Chr3g0131121 57.778 135 51 1 2 136 1 129 9.90e-52 173
Msa1433650 MtrunA17_Chr5g0395281 62.931 116 43 0 2 117 1 116 1.51e-51 172
Msa1433650 MtrunA17_Chr3g0103281 64.655 116 41 0 2 117 1 116 3.19e-51 172
Msa1433650 MtrunA17_Chr4g0057031 62.712 118 44 0 2 119 1 118 1.46e-50 169
Msa1433650 MtrunA17_Chr5g0400821 42.647 204 107 3 2 200 1 199 2.28e-50 170
Msa1433650 MtrunA17_Chr1g0194951 62.931 116 43 0 2 117 1 116 1.59e-49 169
Msa1433650 MtrunA17_Chr4g0070611 59.350 123 50 0 2 124 1 123 3.08e-49 167
Msa1433650 MtrunA17_Chr4g0070641 59.350 123 50 0 2 124 1 123 3.78e-49 162
Msa1433650 MtrunA17_Chr7g0264641 61.538 117 44 1 2 117 1 117 3.97e-49 165
Msa1433650 MtrunA17_Chr8g0385321 62.069 116 44 0 2 117 1 116 5.38e-49 166
Msa1433650 MtrunA17_Chr3g0135311 62.393 117 43 1 2 117 1 117 6.55e-49 167
Msa1433650 MtrunA17_Chr7g0228891 61.207 116 45 0 2 117 1 116 7.95e-49 164
Msa1433650 MtrunA17_Chr6g0452271 57.627 118 50 0 2 119 1 118 1.04e-48 166
Msa1433650 MtrunA17_Chr1g0151941 59.829 117 46 1 2 117 1 117 4.30e-48 162
Msa1433650 MtrunA17_Chr3g0121241 59.821 112 45 0 6 117 35 146 5.85e-48 163
Msa1433650 MtrunA17_Chr4g0028311 60.684 117 45 1 2 117 1 117 8.14e-48 163
Msa1433650 MtrunA17_Chr1g0152011 60.684 117 45 1 2 117 1 117 8.82e-48 164
Msa1433650 MtrunA17_Chr5g0435101 61.207 116 45 0 4 119 2 117 9.81e-48 160
Msa1433650 MtrunA17_Chr2g0311221 60.000 110 44 0 3 112 4 113 1.09e-47 163
Msa1433650 MtrunA17_Chr7g0269831 62.931 116 43 0 2 117 1 116 4.48e-47 162
Msa1433650 MtrunA17_Chr2g0327351 63.063 111 40 1 2 111 1 111 9.11e-47 160
Msa1433650 MtrunA17_Chr8g0387421 58.475 118 49 0 2 119 1 118 3.69e-46 159
Msa1433650 MtrunA17_Chr4g0022931 54.762 126 56 1 2 126 1 126 1.68e-45 156
Msa1433650 MtrunA17_Chr4g0072751 43.913 230 100 8 2 209 1 223 2.81e-45 157
Msa1433650 MtrunA17_Chr2g0323351 51.880 133 64 0 2 134 1 133 3.65e-45 154
Msa1433650 MtrunA17_Chr1g0193371 47.059 170 81 3 2 168 1 164 4.38e-45 157
Msa1433650 MtrunA17_Chr2g0309911 58.559 111 46 0 7 117 5 115 2.06e-44 154
Msa1433650 MtrunA17_Chr4g0022901 49.640 139 69 1 2 139 1 139 3.79e-44 152
Msa1433650 MtrunA17_Chr4g0058631 54.688 128 52 1 2 129 1 122 4.08e-44 155
Msa1433650 MtrunA17_Chr4g0054391 60.000 110 43 1 2 110 1 110 5.17e-44 152
Msa1433650 MtrunA17_Chr1g0193801 57.759 116 49 0 2 117 1 116 9.40e-44 154
Msa1433650 MtrunA17_Chr7g0270891 56.897 116 50 0 2 117 1 116 2.21e-43 153
Msa1433650 MtrunA17_Chr4g0022911 48.529 136 69 1 2 136 1 136 2.74e-43 150
Msa1433650 MtrunA17_Chr5g0397231 60.000 110 44 0 2 111 1 110 3.41e-43 152
Msa1433650 MtrunA17_Chr5g0417821 57.944 107 45 0 11 117 5 111 6.27e-43 150
Msa1433650 MtrunA17_Chr3g0117091 54.688 128 52 1 2 129 1 122 6.87e-43 151
Msa1433650 MtrunA17_Chr1g0211161 54.264 129 53 1 1 129 1 123 1.15e-42 147
Msa1433650 MtrunA17_Chr2g0330041 55.172 116 52 0 2 117 1 116 1.34e-42 152
Msa1433650 MtrunA17_Chr4g0044421 54.237 118 54 0 2 119 1 118 2.16e-42 145
Msa1433650 MtrunA17_Chr6g0487491 52.206 136 56 2 2 128 1 136 2.30e-42 147
Msa1433650 MtrunA17_Chr7g0271241 61.468 109 42 0 2 110 1 109 2.44e-42 150
Msa1433650 MtrunA17_Chr8g0342541 56.034 116 51 0 2 117 1 116 2.47e-42 150
Msa1433650 MtrunA17_Chr8g0342521 56.034 116 51 0 2 117 1 116 8.11e-42 148
Msa1433650 MtrunA17_Chr3g0099131 61.538 104 40 0 13 116 41 144 1.08e-41 152
Msa1433650 MtrunA17_Chr7g0240821 59.633 109 44 0 17 125 5 113 2.40e-41 144
Msa1433650 MtrunA17_Chr4g0055981 53.659 123 57 0 13 135 55 177 2.78e-41 144
Msa1433650 MtrunA17_Chr8g0354661 60.577 104 41 0 13 116 37 140 4.67e-41 150
Msa1433650 MtrunA17_Chr4g0022881 51.880 133 60 1 2 134 1 129 4.70e-41 143
Msa1433650 MtrunA17_Chr4g0022891 54.867 113 51 0 2 114 1 113 1.17e-40 142
Msa1433650 MtrunA17_Chr8g0343831 58.879 107 44 0 13 119 8 114 1.39e-40 142
Msa1433650 MtrunA17_Chr3g0080861 59.615 104 42 0 13 116 37 140 2.99e-40 147
Msa1433650 MtrunA17_Chr2g0322521 59.813 107 43 0 10 116 26 132 3.43e-40 145
Msa1433650 MtrunA17_Chr1g0203441 52.000 125 53 1 14 138 14 131 1.14e-39 140
Msa1433650 MtrunA17_Chr1g0168661 52.846 123 58 0 14 136 22 144 1.65e-39 140
Msa1433650 MtrunA17_Chr7g0228231 51.754 114 55 0 13 126 14 127 1.69e-39 138
Msa1433650 MtrunA17_Chr2g0328771 54.054 111 51 0 13 123 20 130 1.81e-39 141
Msa1433650 MtrunA17_Chr6g0470971 41.436 181 90 3 8 188 9 173 2.38e-39 140
Msa1433650 MtrunA17_Chr4g0032401 56.190 105 46 0 13 117 17 121 7.43e-39 140
Msa1433650 MtrunA17_Chr8g0342481 53.846 117 53 1 2 117 1 117 8.06e-39 142
Msa1433650 MtrunA17_Chr5g0434911 55.455 110 49 0 8 117 16 125 1.27e-38 138
Msa1433650 MtrunA17_Chr5g0434931 57.547 106 45 0 12 117 34 139 1.81e-38 138
Msa1433650 MtrunA17_Chr3g0088461 55.238 105 47 0 13 117 22 126 3.20e-38 139
Msa1433650 MtrunA17_Chr1g0186061 58.252 103 43 0 14 116 21 123 3.64e-38 136
Msa1433650 MtrunA17_Chr4g0042611 64.773 88 31 0 2 89 1 88 5.51e-38 130
Msa1433650 MtrunA17_Chr2g0294811 60.870 92 36 0 2 93 1 92 7.91e-38 131
Msa1433650 MtrunA17_Chr6g0450101 50.000 120 58 1 2 119 1 120 8.81e-38 134
Msa1433650 MtrunA17_Chr1g0194301 41.500 200 101 6 9 204 29 216 8.96e-38 136
Msa1433650 MtrunA17_Chr1g0194291 55.238 105 47 0 12 116 20 124 2.28e-37 134
Msa1433650 MtrunA17_Chr1g0154031 55.769 104 46 0 13 116 76 179 3.62e-37 137
Msa1433650 MtrunA17_Chr2g0327821 53.846 104 48 0 13 116 6 109 4.87e-37 133
Msa1433650 MtrunA17_Chr7g0220341 52.542 118 54 1 11 126 23 140 5.36e-37 134
Msa1433650 MtrunA17_Chr5g0434831 55.660 106 47 0 12 117 6 111 1.75e-36 130
Msa1433650 MtrunA17_Chr1g0209661 52.885 104 49 0 13 116 27 130 6.93e-36 132
Msa1433650 MtrunA17_Chr5g0434841 54.717 106 48 0 12 117 19 124 2.22e-35 130
Msa1433650 MtrunA17_Chr7g0228991 55.660 106 47 0 12 117 28 133 2.72e-35 129
Msa1433650 MtrunA17_Chr7g0247131 72.603 73 20 0 45 117 10 82 1.07e-34 127
Msa1433650 MtrunA17_Chr8g0360111 55.882 102 45 0 12 113 24 125 1.09e-34 127
Msa1433650 MtrunA17_Chr4g0068921 50.467 107 53 0 9 115 20 126 2.40e-33 122
Msa1433650 MtrunA17_Chr8g0334881 50.962 104 50 1 13 115 10 113 3.67e-33 125
Msa1433650 MtrunA17_Chr2g0293911 51.402 107 52 0 9 115 20 126 4.77e-33 124
Msa1433650 MtrunA17_Chr1g0180391 50.459 109 54 0 13 121 19 127 7.65e-33 121
Msa1433650 MtrunA17_Chr5g0395221 60.714 84 33 0 6 89 5 88 1.07e-32 117
Msa1433650 MtrunA17_Chr4g0013361 49.074 108 54 1 9 115 6 113 1.58e-32 122
Msa1433650 MtrunA17_Chr5g0441131 50.000 110 53 2 11 119 7 115 8.70e-32 117
Msa1433650 MtrunA17_Chr3g0099141 56.471 85 37 0 13 97 40 124 2.62e-31 115
Msa1433650 MtrunA17_Chr5g0440781 48.598 107 53 2 14 119 13 118 4.31e-31 115
Msa1433650 MtrunA17_Chr5g0440761 34.314 204 107 6 14 198 13 208 1.14e-30 117
Msa1433650 MtrunA17_Chr1g0192411 46.296 108 58 0 9 116 8 115 1.57e-30 119
Msa1433650 MtrunA17_Chr5g0441141 48.598 107 53 2 14 119 13 118 3.03e-30 116
Msa1433650 MtrunA17_Chr4g0008551 52.941 102 47 1 15 116 38 138 3.18e-30 117
Msa1433650 MtrunA17_Chr2g0323321 48.571 105 53 1 2 106 1 104 1.98e-29 109
Msa1433650 MtrunA17_Chr4g0030881 46.364 110 52 1 14 116 8 117 4.73e-29 112
Msa1433650 MtrunA17_Chr8g0342511 54.023 87 40 0 2 88 1 87 5.08e-29 107
Msa1433650 MtrunA17_Chr8g0342531 43.966 116 60 1 2 112 1 116 2.07e-28 108
Msa1433650 MtrunA17_Chr5g0401731 49.057 106 45 2 15 116 15 115 8.50e-27 107
Msa1433650 MtrunA17_Chr4g0053431 45.217 115 54 2 15 125 5 114 1.39e-26 106
Msa1433650 MtrunA17_Chr6g0454921 47.170 106 47 2 15 116 15 115 1.84e-26 104
Msa1433650 MtrunA17_Chr3g0133601 48.598 107 54 1 10 116 32 137 2.59e-26 104
Msa1433650 MtrunA17_Chr8g0342461 50.000 90 44 1 2 90 1 90 1.36e-25 100
Msa1433650 MtrunA17_Chr8g0342471 50.000 90 44 1 2 90 1 90 3.92e-25 98.6
Msa1433650 MtrunA17_Chr7g0229101 64.286 70 25 0 45 114 4 73 3.98e-25 100
Msa1433650 MtrunA17_Chr7g0238651 39.474 114 67 1 18 129 10 123 7.75e-24 100
Msa1433650 MtrunA17_Chr7g0229131 57.534 73 31 0 45 117 4 76 9.21e-24 95.9
Msa1433650 MtrunA17_Chr3g0139671 41.346 104 60 1 15 118 85 187 1.40e-23 101
Msa1433650 MtrunA17_Chr3g0139671 31.858 113 75 2 15 126 33 144 1.85e-11 65.5
Msa1433650 MtrunA17_Chr6g0480581 43.564 101 56 1 15 115 4 103 1.18e-22 94.7
Msa1433650 MtrunA17_Chr7g0238631 43.636 110 53 2 13 118 111 215 1.24e-22 98.6
Msa1433650 MtrunA17_Chr5g0429661 41.071 112 65 1 15 126 122 232 1.55e-22 96.7
Msa1433650 MtrunA17_Chr1g0157731 37.736 106 65 1 13 118 89 193 1.83e-22 98.6
Msa1433650 MtrunA17_Chr1g0157731 30.088 113 77 2 15 126 39 150 8.23e-11 63.2
Msa1433650 MtrunA17_Chr4g0058991 42.342 111 63 1 9 119 203 312 2.25e-22 97.4
Msa1433650 MtrunA17_Chr5g0425591 45.882 85 45 1 11 94 7 91 2.47e-22 89.7
Msa1433650 MtrunA17_Chr5g0434901 60.294 68 27 0 47 114 7 74 2.69e-22 90.5
Msa1433650 MtrunA17_Chr5g0437321 46.465 99 52 1 15 113 19 116 2.37e-21 92.4
Msa1433650 MtrunA17_Chr3g0117511 39.640 111 66 1 9 119 177 286 3.41e-21 94.0
Msa1433650 MtrunA17_Chr4g0042501 42.202 109 61 2 15 123 105 211 1.66e-20 91.7
Msa1433650 MtrunA17_Chr6g0460671 41.121 107 61 2 10 116 95 199 2.05e-20 90.5
Msa1433650 MtrunA17_Chr5g0417621 42.157 102 58 1 15 116 134 234 4.35e-20 90.5
Msa1433650 MtrunA17_Chr7g0228531 39.286 112 66 2 11 122 216 325 1.67e-19 89.0
Msa1433650 MtrunA17_Chr6g0460661 39.450 109 65 1 15 123 16 123 2.41e-19 84.0
Msa1433650 MtrunA17_Chr3g0093811 52.000 75 36 0 45 119 14 88 2.89e-19 85.9
Msa1433650 MtrunA17_Chr6g0453751 43.478 92 43 2 12 94 19 110 3.92e-19 82.4
Msa1433650 MtrunA17_Chr3g0125801 43.137 102 57 1 15 116 16 116 2.06e-18 84.0
Msa1433650 MtrunA17_Chr5g0397841 40.196 102 52 2 13 110 108 204 7.64e-18 84.3
Msa1433650 MtrunA17_Chr8g0362231 30.601 183 113 4 18 187 25 206 9.55e-18 83.6
Msa1433650 MtrunA17_Chr7g0254261 39.216 102 61 1 15 116 89 189 2.71e-17 81.6
Msa1433650 MtrunA17_Chr7g0228481 39.604 101 59 2 11 111 216 314 2.74e-16 79.3
Msa1433650 MtrunA17_Chr1g0177901 39.604 101 59 2 24 124 3 101 3.38e-16 76.3
Msa1433650 MtrunA17_Chr1g0193901 53.448 58 26 1 13 69 11 68 5.00e-16 73.2
Msa1433650 MtrunA17_Chr1g0193891 53.448 58 26 1 13 69 11 68 5.00e-16 73.2
Msa1433650 MtrunA17_Chr1g0193871 53.448 58 26 1 13 69 11 68 5.00e-16 73.2
Msa1433650 MtrunA17_Chr1g0193881 53.448 58 26 1 13 69 11 68 5.00e-16 73.2
Msa1433650 MtrunA17_Chr7g0228401 39.785 93 54 2 26 118 290 380 1.05e-15 77.8
Msa1433650 MtrunA17_Chr7g0247141 60.417 48 18 1 2 48 1 48 2.83e-15 69.7
Msa1433650 MtrunA17_Chr5g0416341 36.364 99 62 1 18 116 29 126 3.51e-15 76.3
Msa1433650 MtrunA17_Chr7g0233061 36.207 116 62 4 15 124 180 289 3.04e-14 72.8
Msa1433650 MtrunA17_Chr5g0434871 58.140 43 18 0 75 117 2 44 1.30e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433650 AT5G62470.2 50.802 374 120 11 2 333 1 352 6.38e-103 306
Msa1433650 AT3G47600.1 51.567 351 123 12 2 328 1 328 1.10e-102 305
Msa1433650 AT1G74650.1 49.435 354 124 9 2 327 1 327 8.08e-102 303
Msa1433650 AT3G28910.1 48.968 339 116 6 2 313 1 309 1.60e-101 301
Msa1433650 AT5G62470.1 50.802 374 119 12 2 333 1 351 2.49e-101 302
Msa1433650 AT1G08810.1 47.493 339 90 10 2 321 1 270 3.78e-86 261
Msa1433650 AT3G47600.2 46.254 307 118 12 46 328 39 322 1.38e-66 213
Msa1433650 AT5G15310.4 52.973 185 73 4 2 174 1 183 1.17e-61 197
Msa1433650 AT3G01140.2 53.409 176 68 3 2 165 1 174 1.98e-61 200
Msa1433650 AT5G15310.2 52.973 185 73 4 2 174 1 183 2.68e-61 198
Msa1433650 AT5G15310.1 52.973 185 73 4 2 174 1 183 3.28e-61 199
Msa1433650 AT3G01140.1 51.977 177 71 3 1 165 43 217 1.49e-58 194
Msa1433650 AT3G61250.1 50.581 172 63 3 2 157 1 166 6.32e-58 189
Msa1433650 AT3G23250.1 65.000 120 42 0 2 121 1 120 7.38e-57 186
Msa1433650 AT1G06180.1 64.000 125 45 0 2 126 1 125 7.78e-57 185
Msa1433650 AT2G31180.1 64.706 119 42 0 2 120 1 119 1.46e-56 184
Msa1433650 AT4G21440.1 66.379 116 39 0 2 117 1 116 1.92e-55 184
Msa1433650 AT3G02940.2 64.655 116 41 0 2 117 1 116 5.00e-55 182
Msa1433650 AT4G28110.1 63.793 116 42 0 2 117 1 116 5.46e-55 181
Msa1433650 AT5G16770.4 65.517 116 40 0 2 117 1 116 9.29e-55 182
Msa1433650 AT5G16770.3 65.517 116 40 0 2 117 1 116 9.29e-55 182
Msa1433650 AT3G02940.1 64.655 116 41 0 2 117 1 116 1.01e-54 182
Msa1433650 AT3G02940.3 64.655 116 41 0 2 117 1 116 1.01e-54 182
Msa1433650 AT5G16770.1 65.517 116 40 0 2 117 1 116 2.46e-54 181
Msa1433650 AT5G16770.2 65.517 116 40 0 2 117 1 116 2.46e-54 181
Msa1433650 AT1G35515.1 65.517 116 40 0 2 117 1 116 5.22e-54 176
Msa1433650 AT4G05100.1 64.706 119 41 1 2 119 1 119 8.09e-54 179
Msa1433650 AT5G49330.1 65.517 116 40 0 2 117 1 116 8.63e-54 180
Msa1433650 AT4G09460.1 65.517 116 40 0 2 117 1 116 1.02e-53 176
Msa1433650 AT1G22640.1 64.655 116 41 0 2 117 1 116 4.60e-53 175
Msa1433650 AT1G66230.1 49.383 162 69 1 2 150 1 162 7.17e-53 176
Msa1433650 AT2G16720.1 65.517 116 40 0 2 117 1 116 8.22e-53 175
Msa1433650 AT1G56160.1 60.870 115 45 0 3 117 4 118 1.75e-52 175
Msa1433650 AT1G34670.1 63.793 116 42 0 2 117 1 116 2.28e-52 177
Msa1433650 AT4G38620.1 63.793 116 42 0 2 117 1 116 3.31e-52 174
Msa1433650 AT1G79180.1 58.871 124 51 0 3 126 4 127 7.23e-52 173
Msa1433650 AT2G47460.1 65.517 116 40 0 2 117 1 116 1.26e-51 175
Msa1433650 AT3G62610.1 67.241 116 38 0 2 117 1 116 1.86e-51 174
Msa1433650 AT5G56110.1 64.655 116 41 0 2 117 1 116 2.75e-51 173
Msa1433650 AT4G34990.1 64.655 116 41 0 2 117 1 116 4.42e-51 171
Msa1433650 AT3G13540.1 56.489 131 51 1 6 136 16 140 5.07e-51 170
Msa1433650 AT5G54230.1 65.517 116 40 0 2 117 1 116 6.34e-51 172
Msa1433650 AT4G17785.2 64.103 117 41 1 2 117 1 117 1.22e-50 172
Msa1433650 AT4G17785.1 64.103 117 41 1 2 117 1 117 1.88e-50 172
Msa1433650 AT5G61420.2 61.207 116 45 0 2 117 1 116 2.36e-50 172
Msa1433650 AT5G07690.1 54.745 137 56 1 2 138 1 131 2.43e-50 171
Msa1433650 AT1G18570.1 63.025 119 43 1 2 119 1 119 3.61e-50 171
Msa1433650 AT5G60890.1 53.571 140 59 1 2 141 1 134 6.32e-50 168
Msa1433650 AT4G37780.1 61.538 117 44 1 2 117 1 117 7.81e-50 169
Msa1433650 AT4G12350.1 61.017 118 46 0 2 119 1 118 1.00e-49 167
Msa1433650 AT5G10280.1 61.207 116 45 0 2 117 1 116 1.98e-49 168
Msa1433650 AT1G16490.1 51.079 139 62 1 3 135 4 142 2.52e-49 166
Msa1433650 AT5G16600.1 59.322 118 48 0 2 119 1 118 4.31e-49 167
Msa1433650 AT5G65230.1 61.207 116 45 0 2 117 1 116 7.26e-49 166
Msa1433650 AT1G74080.1 58.475 118 49 0 2 119 1 118 3.08e-48 165
Msa1433650 AT5G07700.1 45.614 171 78 2 2 163 1 165 6.31e-48 164
Msa1433650 AT5G07700.2 45.614 171 78 2 2 163 1 165 6.31e-48 164
Msa1433650 AT4G22680.1 60.169 118 47 0 2 119 1 118 6.78e-48 162
Msa1433650 AT5G57620.1 58.974 117 47 1 2 117 1 117 1.58e-47 163
Msa1433650 AT3G49690.1 59.504 121 48 1 2 121 1 121 2.73e-47 162
Msa1433650 AT5G23000.1 58.974 117 47 1 2 117 1 117 9.44e-47 161
Msa1433650 AT5G62320.1 58.065 124 45 1 1 117 1 124 9.51e-47 159
Msa1433650 AT3G12820.1 60.345 116 46 0 4 119 5 120 1.73e-46 158
Msa1433650 AT5G14340.1 60.345 116 46 0 2 117 13 128 1.99e-46 159
Msa1433650 AT5G65790.1 58.974 117 47 1 2 117 1 117 4.81e-46 160
Msa1433650 AT1G74430.1 61.017 118 46 0 2 119 1 118 5.90e-46 157
Msa1433650 AT1G79180.2 47.134 157 50 1 3 126 4 160 1.23e-45 158
Msa1433650 AT2G36890.1 58.120 117 48 1 2 117 1 117 3.22e-45 156
Msa1433650 AT2G36890.2 58.120 117 48 1 2 117 42 158 4.21e-45 157
Msa1433650 AT5G26660.1 55.469 128 51 1 2 129 1 122 4.52e-45 157
Msa1433650 AT1G63910.1 57.627 118 50 0 2 119 1 118 5.22e-45 157
Msa1433650 AT4G01680.3 58.621 116 48 0 2 117 1 116 6.35e-45 154
Msa1433650 AT5G14750.1 55.200 125 55 1 14 137 17 141 7.70e-45 152
Msa1433650 AT4G01680.1 58.621 116 48 0 2 117 1 116 3.68e-44 154
Msa1433650 AT1G57560.1 57.627 118 50 0 2 119 1 118 6.05e-44 153
Msa1433650 AT1G09540.1 58.475 118 49 0 2 119 1 118 8.62e-44 154
Msa1433650 AT1G57560.2 57.627 118 50 0 2 119 1 118 8.84e-44 152
Msa1433650 AT2G32460.1 62.037 108 41 0 9 116 14 121 1.09e-43 157
Msa1433650 AT2G32460.2 59.483 116 40 1 1 116 1 109 1.18e-43 156
Msa1433650 AT3G13890.2 55.172 116 52 0 2 117 1 116 1.20e-43 154
Msa1433650 AT1G18710.1 56.780 118 51 0 2 119 1 118 1.26e-43 151
Msa1433650 AT3G28470.1 56.364 110 48 0 2 111 1 110 3.93e-43 151
Msa1433650 AT5G40330.1 60.577 104 41 0 14 117 13 116 3.93e-43 148
Msa1433650 AT3G27920.1 58.182 110 46 0 14 123 15 124 3.31e-42 146
Msa1433650 AT3G12720.1 38.462 195 104 3 7 201 16 194 5.12e-42 148
Msa1433650 AT1G74650.3 38.129 278 117 9 78 327 1 251 7.01e-42 146
Msa1433650 AT3G28910.2 38.132 257 114 5 78 313 1 233 1.42e-41 145
Msa1433650 AT5G55020.1 60.952 105 41 0 13 117 26 130 2.00e-41 151
Msa1433650 AT5G52600.1 53.448 116 54 0 13 128 12 127 2.79e-41 143
Msa1433650 AT3G01530.1 58.095 105 44 0 13 117 25 129 4.34e-41 143
Msa1433650 AT5G35550.1 56.364 110 48 0 13 122 14 123 7.38e-41 144
Msa1433650 AT5G06100.1 58.095 105 44 0 12 116 31 135 8.01e-41 148
Msa1433650 AT4G01680.2 53.125 128 48 1 2 117 1 128 1.13e-40 145
Msa1433650 AT3G13890.1 51.200 125 52 1 2 117 1 125 1.38e-40 146
Msa1433650 AT2G26960.1 59.434 106 43 0 10 115 17 122 1.44e-40 147
Msa1433650 AT5G06100.5 58.095 105 44 0 12 116 31 135 2.95e-40 148
Msa1433650 AT5G06100.2 58.095 105 44 0 12 116 31 135 2.95e-40 148
Msa1433650 AT5G06100.3 58.095 105 44 0 12 116 31 135 2.95e-40 148
Msa1433650 AT5G06100.4 58.095 105 44 0 12 116 31 135 2.95e-40 148
Msa1433650 AT3G11440.2 57.692 104 44 0 13 116 41 144 3.21e-40 147
Msa1433650 AT3G30210.1 54.839 124 55 1 12 135 26 148 8.93e-40 141
Msa1433650 AT3G11440.3 57.692 104 44 0 13 116 41 144 1.47e-39 147
Msa1433650 AT3G11440.4 57.692 104 44 0 13 116 41 144 1.47e-39 147
Msa1433650 AT3G11440.1 57.692 104 44 0 13 116 41 144 1.47e-39 147
Msa1433650 AT3G24310.1 56.522 115 50 0 12 126 17 131 1.50e-39 140
Msa1433650 AT1G66370.1 58.095 105 44 0 12 116 7 111 4.91e-39 139
Msa1433650 AT4G26930.1 58.252 103 43 0 13 115 19 121 5.04e-39 142
Msa1433650 AT4G13480.1 52.308 130 61 1 14 143 7 135 1.02e-38 138
Msa1433650 AT3G27810.1 47.581 124 65 0 13 136 20 143 1.74e-38 137
Msa1433650 AT5G12870.1 54.206 107 49 0 13 119 18 124 5.25e-38 137
Msa1433650 AT3G08500.1 54.286 105 48 0 13 117 30 134 6.16e-38 138
Msa1433650 AT5G40350.1 51.304 115 56 0 13 127 17 131 7.47e-38 134
Msa1433650 AT2G47190.1 53.704 108 50 0 9 116 16 123 1.69e-37 135
Msa1433650 AT1G25340.1 53.097 113 50 1 14 123 19 131 2.91e-36 132
Msa1433650 AT4G25560.1 53.571 112 52 0 14 125 11 122 7.24e-36 131
Msa1433650 AT3G46130.1 53.333 105 49 0 12 116 8 112 9.99e-36 130
Msa1433650 AT5G59780.3 54.369 103 47 0 14 116 9 111 1.01e-35 129
Msa1433650 AT1G48000.1 55.340 103 46 0 13 115 32 134 2.33e-35 129
Msa1433650 AT3G48920.1 50.000 108 54 0 14 121 19 126 5.42e-35 128
Msa1433650 AT1G66380.1 57.143 105 45 0 12 116 7 111 1.06e-34 124
Msa1433650 AT1G68320.1 52.885 104 49 0 13 116 19 122 1.08e-34 128
Msa1433650 AT5G52260.1 55.556 108 48 0 14 121 13 120 1.22e-34 127
Msa1433650 AT1G74650.2 35.926 270 118 9 86 327 4 246 1.19e-33 124
Msa1433650 AT3G60460.1 49.541 109 54 1 8 115 6 114 1.83e-33 125
Msa1433650 AT1G66390.1 56.190 105 46 0 12 116 7 111 2.25e-33 124
Msa1433650 AT1G56650.1 56.190 105 46 0 12 116 7 111 3.37e-33 123
Msa1433650 AT1G25340.2 51.327 113 47 2 14 123 19 126 7.65e-33 123
Msa1433650 AT1G25340.3 51.327 113 47 2 14 123 19 126 1.19e-32 123
Msa1433650 AT5G49620.1 52.336 107 51 0 9 115 22 128 2.26e-32 122
Msa1433650 AT3G06490.1 52.336 107 51 0 9 115 15 121 4.09e-32 122
Msa1433650 AT3G53200.1 51.923 104 50 0 13 116 9 112 9.28e-32 119
Msa1433650 AT5G14750.3 56.044 91 39 1 48 137 17 107 2.04e-30 114
Msa1433650 AT2G26950.1 48.182 110 57 0 10 119 13 122 8.36e-30 117
Msa1433650 AT3G12820.2 66.667 72 24 0 48 119 1 72 1.50e-29 112
Msa1433650 AT2G39880.1 51.887 106 42 2 15 116 50 150 2.61e-29 115
Msa1433650 AT5G35550.2 62.338 77 29 0 46 122 50 126 6.40e-29 112
Msa1433650 AT5G49620.2 46.281 121 51 1 9 115 22 142 7.23e-29 114
Msa1433650 AT2G23290.1 50.943 106 43 2 15 116 13 113 1.22e-27 110
Msa1433650 AT5G26660.2 57.143 84 30 1 46 129 14 91 1.86e-27 110
Msa1433650 AT3G55730.1 49.057 106 45 2 15 116 56 156 2.59e-27 110
Msa1433650 AT4G37260.1 46.154 117 54 2 15 127 13 124 3.54e-27 109
Msa1433650 AT3G09230.1 46.729 107 48 2 15 117 55 156 5.25e-26 107
Msa1433650 AT3G46130.3 59.722 72 29 0 45 116 9 80 4.28e-25 101
Msa1433650 AT5G59780.2 59.722 72 29 0 45 116 19 90 5.51e-25 100
Msa1433650 AT3G46130.4 60.563 71 28 0 46 116 20 90 9.02e-25 100
Msa1433650 AT5G02320.1 45.714 105 56 1 13 117 125 228 2.00e-24 104
Msa1433650 AT5G02320.2 45.714 105 56 1 13 117 125 228 2.00e-24 104
Msa1433650 AT5G02320.3 45.714 105 56 1 13 117 65 168 2.28e-24 103
Msa1433650 AT3G53200.2 56.579 76 33 0 41 116 4 79 8.31e-24 97.4
Msa1433650 AT3G27810.2 46.154 91 49 0 46 136 4 94 1.10e-23 96.3
Msa1433650 AT5G40350.2 51.190 84 41 0 44 127 3 86 1.31e-23 95.9
Msa1433650 AT3G50060.1 46.226 106 48 2 15 116 6 106 1.71e-23 99.0
Msa1433650 AT5G67300.1 46.226 106 48 2 15 116 6 106 2.10e-23 98.6
Msa1433650 AT3G27785.1 41.525 118 68 1 9 126 183 299 2.36e-23 100
Msa1433650 AT1G66380.3 63.380 71 26 0 46 116 8 78 2.54e-23 93.2
Msa1433650 AT5G11510.5 39.640 111 66 1 13 123 79 188 7.69e-23 100
Msa1433650 AT5G11510.5 31.858 113 75 2 15 126 29 140 2.24e-11 65.5
Msa1433650 AT5G11510.2 39.640 111 66 1 13 123 79 188 7.95e-23 99.8
Msa1433650 AT5G11510.2 31.858 113 75 2 15 126 29 140 2.35e-11 65.5
Msa1433650 AT5G58850.1 38.211 123 75 1 15 137 105 226 7.97e-23 99.0
Msa1433650 AT5G11510.3 39.640 111 66 1 13 123 79 188 8.55e-23 99.8
Msa1433650 AT5G11510.3 31.858 113 75 2 15 126 29 140 2.65e-11 65.1
Msa1433650 AT5G11510.1 39.640 111 66 1 13 123 79 188 8.55e-23 99.8
Msa1433650 AT5G11510.1 31.858 113 75 2 15 126 29 140 2.65e-11 65.1
Msa1433650 AT5G11510.4 39.640 111 66 1 13 123 79 188 8.55e-23 99.8
Msa1433650 AT5G11510.4 31.858 113 75 2 15 126 29 140 2.65e-11 65.1
Msa1433650 AT1G69560.1 41.228 114 66 1 10 123 102 214 1.35e-22 97.1
Msa1433650 AT1G69560.2 41.228 114 66 1 10 123 118 230 1.86e-22 96.7
Msa1433650 AT4G32730.5 37.736 106 65 1 13 118 85 189 2.30e-22 98.6
Msa1433650 AT4G32730.4 37.736 106 65 1 13 118 85 189 2.30e-22 98.6
Msa1433650 AT4G32730.3 37.736 106 65 1 13 118 85 189 2.30e-22 98.6
Msa1433650 AT4G32730.2 37.736 106 65 1 13 118 85 189 2.30e-22 98.6
Msa1433650 AT1G22640.3 65.517 58 20 0 60 117 2 59 2.49e-22 93.2
Msa1433650 AT4G32730.1 37.736 106 65 1 13 118 85 189 2.54e-22 98.6
Msa1433650 AT2G37630.1 38.532 109 65 1 18 124 7 115 6.39e-22 95.5
Msa1433650 AT5G14750.4 53.165 79 36 1 60 137 2 80 8.00e-22 90.1
Msa1433650 AT5G14750.2 53.165 79 36 1 60 137 2 80 8.00e-22 90.1
Msa1433650 AT1G26780.1 40.541 111 65 1 13 123 96 205 1.18e-21 93.2
Msa1433650 AT1G17950.1 42.157 102 58 1 15 116 5 105 1.27e-21 92.4
Msa1433650 AT5G11050.1 38.333 120 73 1 13 132 103 221 1.28e-21 95.1
Msa1433650 AT3G09370.2 45.098 102 55 1 15 116 135 235 1.65e-21 95.5
Msa1433650 AT3G09370.1 45.098 102 55 1 15 116 130 230 1.68e-21 95.5
Msa1433650 AT1G66380.2 47.959 98 50 1 12 108 7 104 1.92e-21 88.2
Msa1433650 AT3G09370.3 45.098 102 55 1 15 116 143 243 1.98e-21 95.5
Msa1433650 AT5G40360.1 39.806 103 61 1 13 115 156 257 2.18e-21 94.0
Msa1433650 AT1G26780.2 40.541 111 65 1 13 123 96 205 2.50e-21 93.6
Msa1433650 AT4G18770.1 37.838 111 68 1 9 119 211 320 3.33e-21 94.0
Msa1433650 AT4G33450.1 38.333 120 68 2 4 123 13 126 4.37e-21 91.3
Msa1433650 AT3G23250.2 63.793 58 21 0 60 117 2 59 1.28e-20 89.4
Msa1433650 AT5G17800.1 41.121 107 62 1 15 121 93 198 2.16e-20 90.5
Msa1433650 AT1G18960.1 39.048 105 61 2 15 119 10 111 4.60e-20 89.4
Msa1433650 AT3G29020.1 39.450 109 65 1 15 123 65 172 6.17e-20 87.4
Msa1433650 AT1G71030.2 52.778 72 34 0 48 119 1 72 7.00e-20 86.3
Msa1433650 AT5G39700.1 37.719 114 70 1 16 129 57 169 8.41e-20 86.3
Msa1433650 AT1G71030.1 52.778 72 34 0 48 119 15 86 9.11e-20 86.3
Msa1433650 AT3G29020.2 39.450 109 65 1 15 123 67 174 1.27e-19 88.2
Msa1433650 AT1G73410.1 42.157 102 58 1 15 116 6 106 2.50e-19 86.3
Msa1433650 AT1G73410.2 42.157 102 58 1 15 116 6 106 4.77e-19 84.3
Msa1433650 AT1G08810.3 41.912 136 27 4 89 223 5 89 6.55e-18 81.3
Msa1433650 AT1G08810.2 41.912 136 27 4 89 223 5 89 6.55e-18 81.3
Msa1433650 AT2G25230.1 41.071 112 63 3 9 119 20 129 6.76e-18 82.0
Msa1433650 AT1G14350.2 36.607 112 65 2 18 124 28 138 8.88e-17 81.3
Msa1433650 AT1G14350.1 36.607 112 65 2 18 124 28 138 8.88e-17 81.3
Msa1433650 AT2G02820.3 37.374 99 61 1 18 116 33 130 4.34e-16 78.6
Msa1433650 AT2G02820.1 37.374 99 61 1 18 116 33 130 7.94e-16 78.6
Msa1433650 AT2G02820.2 37.374 99 61 1 18 116 33 130 9.97e-16 78.2
Msa1433650 AT4G00540.2 36.134 119 72 2 13 128 101 218 1.05e-15 77.8
Msa1433650 AT4G00540.1 36.134 119 72 2 13 128 99 216 1.30e-15 77.8
Msa1433650 AT5G40430.1 26.744 172 105 3 8 160 47 216 4.47e-14 71.6
Msa1433650 AT4G25560.2 54.902 51 23 0 75 125 6 56 8.58e-12 64.3
Msa1433650 AT5G15310.3 38.235 102 49 4 85 174 5 104 1.85e-11 63.9
Msa1433650 AT5G59780.1 54.348 46 21 0 71 116 1 46 3.25e-11 61.6
Msa1433650 AT3G46130.2 54.348 46 21 0 71 116 1 46 5.50e-11 61.6

Find 79 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCACCTCCAAGCTCTTT+TGG 0.154725 tig0027382:+43537 Msa1433650:CDS
TTGAACTATTAATTATTAAT+TGG 0.197259 tig0027382:-44749 None:intergenic
AACCTCTAGTTCTGAATTTC+AGG 0.220553 tig0027382:+44562 Msa1433650:three_prime_UTR
CTGATTATGCATCTCGATTT+AGG 0.240478 tig0027382:+44302 Msa1433650:CDS
TTCTCTAGTCTTTAAATTAG+AGG 0.246347 tig0027382:-44617 None:intergenic
AACAACATGGACCTGGTAAT+TGG 0.261004 tig0027382:+43216 Msa1433650:CDS
GATTAATATTAAAGCAAATA+TGG 0.292292 tig0027382:+44396 Msa1433650:CDS
TGAAAACATTTCTAGATTGA+TGG 0.297412 tig0027382:+44144 Msa1433650:CDS
AGTTCAATGTATGTGTGTTT+TGG 0.322194 tig0027382:+44765 Msa1433650:three_prime_UTR
AGCCTCAGATAAGGCTTGTT+TGG 0.361155 tig0027382:-43993 None:intergenic
CTTTCCCATTGACCTTTATA+CGG 0.370223 tig0027382:-43944 None:intergenic
TCGAGATGCATAATCAGATT+TGG 0.373847 tig0027382:-44296 None:intergenic
CGTTCGCAGCTGCCGTATAA+AGG 0.376269 tig0027382:+43932 Msa1433650:CDS
TTTGTTTCAGCTGATGAGTT+AGG 0.376364 tig0027382:-44184 None:intergenic
ACATGTTTATAAGCTCTTCA+TGG 0.378049 tig0027382:-44486 None:intergenic
CATATGGAGATGGAATATTC+AGG 0.382987 tig0027382:-44111 None:intergenic
ACTAAGATGATATCTTCTTC+AGG 0.401704 tig0027382:-43182 None:intergenic
GCTTATAAACATGTCATTAG+AGG 0.404105 tig0027382:+44495 Msa1433650:CDS
AAGAACAGATCAATTCATAT+TGG 0.407764 tig0027382:+43045 Msa1433650:five_prime_UTR
AATCAGATTTGGTTGAGTTA+AGG 0.409124 tig0027382:-44285 None:intergenic
TGCTTGTAAGTGTAATTAAG+AGG 0.409532 tig0027382:-44668 None:intergenic
GTAAGAGCTGCAGACTTAGA+TGG 0.415442 tig0027382:+43452 Msa1433650:CDS
ATGTCATTGTCTGTCCTTTG+TGG 0.418613 tig0027382:-43827 None:intergenic
GATGAGGGTTTCATCTGATC+AGG 0.419961 tig0027382:-44055 None:intergenic
TAATATTAATCCTTTCCTCT+TGG 0.421047 tig0027382:-44384 None:intergenic
TAGAGCAATTATACCGGTAT+TGG 0.439444 tig0027382:-43252 None:intergenic
GACTAGAGAACTCTAGCAAA+TGG 0.440669 tig0027382:+44630 Msa1433650:three_prime_UTR
GGAGATGGAATATTCAGGTT+TGG 0.447433 tig0027382:-44106 None:intergenic
TATTAATCCTTTCCTCTTGG+TGG 0.453369 tig0027382:-44381 None:intergenic
ATATTATCATATATTGATGA+TGG 0.465309 tig0027382:+43109 Msa1433650:exon
AGCTGCCGTATAAAGGTCAA+TGG 0.472504 tig0027382:+43939 Msa1433650:CDS
ATCGATATTCAGCAACATGC+AGG 0.473325 tig0027382:+44213 Msa1433650:CDS
TTTCTAGATTGATGGAAACT+TGG 0.473758 tig0027382:+44152 Msa1433650:CDS
GGCAAAGTACCAAGGGTTGT+AGG 0.474388 tig0027382:-44034 None:intergenic
GGGTTGTAGGGTTATGTTGA+AGG 0.484469 tig0027382:-44021 None:intergenic
CCACCATGTTGTGAGAAACT+AGG 0.489097 tig0027382:+43137 Msa1433650:CDS
AGCAATTATACCGGTATTGG+TGG 0.493988 tig0027382:-43249 None:intergenic
ACCTGTTGCCCAAAAGAGCT+TGG 0.499117 tig0027382:-43546 None:intergenic
ATTGGAATACACATTTAAAG+AGG 0.511668 tig0027382:+43858 Msa1433650:CDS
GATGGAATATTCAGGTTTGG+TGG 0.513419 tig0027382:-44103 None:intergenic
TATTAAAGCAAATATGGAAA+CGG 0.514444 tig0027382:+44402 Msa1433650:CDS
GCTACAAACAGATATTCATA+TGG 0.516194 tig0027382:+43970 Msa1433650:CDS
CACCATGTTGTGAGAAACTA+GGG 0.518541 tig0027382:+43138 Msa1433650:CDS
CTTCAACTTGAACACAAAAG+AGG 0.519329 tig0027382:+44348 Msa1433650:CDS
CAACATAACCCTACAACCCT+TGG 0.522290 tig0027382:+44025 Msa1433650:CDS
GCAAAGTACCAAGGGTTGTA+GGG 0.526670 tig0027382:-44033 None:intergenic
ATAAAGGTCAATGGGAAAGA+AGG 0.529786 tig0027382:+43948 Msa1433650:CDS
CTTCGACCAGGTATCAAAAG+AGG 0.533759 tig0027382:+43484 Msa1433650:CDS
AGATCTGTTCCCACCAATAC+CGG 0.541923 tig0027382:+43239 Msa1433650:CDS
TCTTCTTCCACCAAGAGGAA+AGG 0.547540 tig0027382:+44374 Msa1433650:CDS
ATCATATATTGATGATGGGA+AGG 0.549071 tig0027382:+43114 Msa1433650:exon
TAGCTTGATGCATATGGAGA+TGG 0.555943 tig0027382:-44121 None:intergenic
GCTGCCGTATAAAGGTCAAT+GGG 0.556660 tig0027382:+43940 Msa1433650:CDS
GATCAAAGTAGTAACGATGA+AGG 0.558829 tig0027382:+43893 Msa1433650:CDS
CGATTTAGGTCAACTCATGA+AGG 0.562437 tig0027382:+44316 Msa1433650:CDS
TATTATCATATATTGATGAT+GGG 0.566306 tig0027382:+43110 Msa1433650:exon
TTCAACTTGAACACAAAAGA+GGG 0.572702 tig0027382:+44349 Msa1433650:CDS
GGTTGTAGGGTTATGTTGAA+GGG 0.574998 tig0027382:-44020 None:intergenic
AAGGGACAAAGCCTCAGATA+AGG 0.576279 tig0027382:-44002 None:intergenic
ATCCCTAGTTTCTCACAACA+TGG 0.578259 tig0027382:-43140 None:intergenic
GTTTCTTACATTCAACAACA+TGG 0.580470 tig0027382:+43203 Msa1433650:CDS
CTTATAAACATGTCATTAGA+GGG 0.583066 tig0027382:+44496 Msa1433650:CDS
ATATCTTCTTCAGGAGTCCA+AGG 0.586539 tig0027382:-43173 None:intergenic
CAGGGATCAAGTTGTAGTGA+AGG 0.587215 tig0027382:+44232 Msa1433650:CDS
TGTTGCCCAAAAGAGCTTGG+AGG 0.587434 tig0027382:-43543 None:intergenic
TACATTCAACAACATGGACC+TGG 0.599526 tig0027382:+43209 Msa1433650:CDS
GGAACAGATCTCCAATTACC+AGG 0.604494 tig0027382:-43227 None:intergenic
AACCTGAAATTCAGAACTAG+AGG 0.614374 tig0027382:-44564 None:intergenic
TCGATATTCAGCAACATGCA+GGG 0.617549 tig0027382:+44214 Msa1433650:CDS
CTGATCAGGCAAAGTACCAA+GGG 0.619842 tig0027382:-44041 None:intergenic
TCTGATCAGGCAAAGTACCA+AGG 0.632255 tig0027382:-44042 None:intergenic
AGCACAACACAAGATCATCA+TGG 0.642061 tig0027382:+44262 Msa1433650:CDS
GCAATTATACCGGTATTGGT+GGG 0.647976 tig0027382:-43248 None:intergenic
GGGTCTCTTCTTCCACCAAG+AGG 0.658408 tig0027382:+44369 Msa1433650:CDS
TGGACAAACTATCTTCGACC+AGG 0.661831 tig0027382:+43472 Msa1433650:CDS
GGCCAAACAAGCCTTATCTG+AGG 0.663946 tig0027382:+43991 Msa1433650:CDS
CCTAGTTTCTCACAACATGG+TGG 0.699379 tig0027382:-43137 None:intergenic
TAGCTTCATATCTTCCACAA+AGG 0.709022 tig0027382:+43813 Msa1433650:CDS
CATGTTGCTGAATATCGATG+AGG 0.741627 tig0027382:-44209 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTTTTTATACTATAT+AGG + tig0027382:43415-43434 Msa1433650:intron 10.0%
!! TTGAACTATTAATTATTAAT+TGG - tig0027382:44752-44771 None:intergenic 10.0%
!!! AATTTGTTTTTATACTATAT+AGG + tig0027382:43415-43434 Msa1433650:intron 10.0%
!! TTGAACTATTAATTATTAAT+TGG - tig0027382:44752-44771 None:intergenic 10.0%
!! ATATTATCATATATTGATGA+TGG + tig0027382:43109-43128 Msa1433650:exon 15.0%
!!! TATTATCATATATTGATGAT+GGG + tig0027382:43110-43129 Msa1433650:exon 15.0%
!!! TATAATTGCTCTATTTTATT+TGG + tig0027382:43262-43281 Msa1433650:intron 15.0%
!! CAAATTAAATCAAATGAATT+AGG - tig0027382:43401-43420 None:intergenic 15.0%
!! TTTCCATTAACTAATTAATT+TGG + tig0027382:43609-43628 Msa1433650:intron 15.0%
!! TATCCAAATTAATTAGTTAA+TGG - tig0027382:43615-43634 None:intergenic 15.0%
!! ACAATGACATAAAAAATTAT+TGG + tig0027382:43840-43859 Msa1433650:CDS 15.0%
!! GATTAATATTAAAGCAAATA+TGG + tig0027382:44396-44415 Msa1433650:CDS 15.0%
!! ATATTATCATATATTGATGA+TGG + tig0027382:43109-43128 Msa1433650:exon 15.0%
!!! TATTATCATATATTGATGAT+GGG + tig0027382:43110-43129 Msa1433650:exon 15.0%
!!! TATAATTGCTCTATTTTATT+TGG + tig0027382:43262-43281 Msa1433650:intron 15.0%
!! CAAATTAAATCAAATGAATT+AGG - tig0027382:43401-43420 None:intergenic 15.0%
!! TTTCCATTAACTAATTAATT+TGG + tig0027382:43609-43628 Msa1433650:intron 15.0%
!! TATCCAAATTAATTAGTTAA+TGG - tig0027382:43615-43634 None:intergenic 15.0%
!! ACAATGACATAAAAAATTAT+TGG + tig0027382:43840-43859 Msa1433650:CDS 15.0%
!! GATTAATATTAAAGCAAATA+TGG + tig0027382:44396-44415 Msa1433650:CDS 15.0%
!! ATAAAATAGAGCAATTATAC+CGG - tig0027382:43261-43280 None:intergenic 20.0%
!! TTTACATGTATTATTGTAAG+TGG - tig0027382:43378-43397 None:intergenic 20.0%
!! TATTAAAGCAAATATGGAAA+CGG + tig0027382:44402-44421 Msa1433650:CDS 20.0%
!! ATAAAATAGAGCAATTATAC+CGG - tig0027382:43261-43280 None:intergenic 20.0%
!! TTTACATGTATTATTGTAAG+TGG - tig0027382:43378-43397 None:intergenic 20.0%
!! TATTAAAGCAAATATGGAAA+CGG + tig0027382:44402-44421 Msa1433650:CDS 20.0%
! AAGAACAGATCAATTCATAT+TGG + tig0027382:43045-43064 Msa1433650:five_prime_UTR 25.0%
! ATTGGAATACACATTTAAAG+AGG + tig0027382:43858-43877 Msa1433650:CDS 25.0%
!! TGAAAACATTTCTAGATTGA+TGG + tig0027382:44144-44163 Msa1433650:CDS 25.0%
! TAATATTAATCCTTTCCTCT+TGG - tig0027382:44387-44406 None:intergenic 25.0%
!!! AAAAATGGCTTTTTGAAGAT+GGG + tig0027382:44446-44465 Msa1433650:CDS 25.0%
! CTTATAAACATGTCATTAGA+GGG + tig0027382:44496-44515 Msa1433650:CDS 25.0%
!! TTCTCTAGTCTTTAAATTAG+AGG - tig0027382:44620-44639 None:intergenic 25.0%
! AAGAACAGATCAATTCATAT+TGG + tig0027382:43045-43064 Msa1433650:five_prime_UTR 25.0%
! ATTGGAATACACATTTAAAG+AGG + tig0027382:43858-43877 Msa1433650:CDS 25.0%
!! TGAAAACATTTCTAGATTGA+TGG + tig0027382:44144-44163 Msa1433650:CDS 25.0%
! TAATATTAATCCTTTCCTCT+TGG - tig0027382:44387-44406 None:intergenic 25.0%
!!! AAAAATGGCTTTTTGAAGAT+GGG + tig0027382:44446-44465 Msa1433650:CDS 25.0%
! CTTATAAACATGTCATTAGA+GGG + tig0027382:44496-44515 Msa1433650:CDS 25.0%
!! TTCTCTAGTCTTTAAATTAG+AGG - tig0027382:44620-44639 None:intergenic 25.0%
!! ATCATATATTGATGATGGGA+AGG + tig0027382:43114-43133 Msa1433650:exon 30.0%
GAGAAACTAGGGATTAAAAA+AGG + tig0027382:43149-43168 Msa1433650:CDS 30.0%
ACTAAGATGATATCTTCTTC+AGG - tig0027382:43185-43204 None:intergenic 30.0%
GTTTCTTACATTCAACAACA+TGG + tig0027382:43203-43222 Msa1433650:CDS 30.0%
! GAACAATCATTTTCTCTTCA+TGG - tig0027382:43522-43541 None:intergenic 30.0%
GTTAATGGAAAGTAAGATGT+AGG - tig0027382:43600-43619 None:intergenic 30.0%
!! CCTGATCTTTATTGTTTTGT+AGG - tig0027382:43728-43747 None:intergenic 30.0%
CCTACAAAACAATAAAGATC+AGG + tig0027382:43725-43744 Msa1433650:intron 30.0%
GCTACAAACAGATATTCATA+TGG + tig0027382:43970-43989 Msa1433650:CDS 30.0%
GAATGAGAAAAACTTGATGA+GGG - tig0027382:44073-44092 None:intergenic 30.0%
AGAATGAGAAAAACTTGATG+AGG - tig0027382:44074-44093 None:intergenic 30.0%
! TTTTCATAGCTTGATGCATA+TGG - tig0027382:44130-44149 None:intergenic 30.0%
TTTCTAGATTGATGGAAACT+TGG + tig0027382:44152-44171 Msa1433650:CDS 30.0%
! AATCAGATTTGGTTGAGTTA+AGG - tig0027382:44288-44307 None:intergenic 30.0%
TTCAACTTGAACACAAAAGA+GGG + tig0027382:44349-44368 Msa1433650:CDS 30.0%
!!! CATTTTTCAAGCAAAGTAAG+AGG - tig0027382:44433-44452 None:intergenic 30.0%
CTCTTACTTTGCTTGAAAAA+TGG + tig0027382:44431-44450 Msa1433650:CDS 30.0%
!! GAAAAATGGCTTTTTGAAGA+TGG + tig0027382:44445-44464 Msa1433650:CDS 30.0%
!! AAAATGGCTTTTTGAAGATG+GGG + tig0027382:44447-44466 Msa1433650:CDS 30.0%
ACATGTTTATAAGCTCTTCA+TGG - tig0027382:44489-44508 None:intergenic 30.0%
GCTTATAAACATGTCATTAG+AGG + tig0027382:44495-44514 Msa1433650:CDS 30.0%
TGCTTGTAAGTGTAATTAAG+AGG - tig0027382:44671-44690 None:intergenic 30.0%
! AGTTCAATGTATGTGTGTTT+TGG + tig0027382:44765-44784 Msa1433650:three_prime_UTR 30.0%
!! ATCATATATTGATGATGGGA+AGG + tig0027382:43114-43133 Msa1433650:exon 30.0%
GAGAAACTAGGGATTAAAAA+AGG + tig0027382:43149-43168 Msa1433650:CDS 30.0%
ACTAAGATGATATCTTCTTC+AGG - tig0027382:43185-43204 None:intergenic 30.0%
GTTTCTTACATTCAACAACA+TGG + tig0027382:43203-43222 Msa1433650:CDS 30.0%
! GAACAATCATTTTCTCTTCA+TGG - tig0027382:43522-43541 None:intergenic 30.0%
GTTAATGGAAAGTAAGATGT+AGG - tig0027382:43600-43619 None:intergenic 30.0%
!! CCTGATCTTTATTGTTTTGT+AGG - tig0027382:43728-43747 None:intergenic 30.0%
CCTACAAAACAATAAAGATC+AGG + tig0027382:43725-43744 Msa1433650:intron 30.0%
GCTACAAACAGATATTCATA+TGG + tig0027382:43970-43989 Msa1433650:CDS 30.0%
GAATGAGAAAAACTTGATGA+GGG - tig0027382:44073-44092 None:intergenic 30.0%
AGAATGAGAAAAACTTGATG+AGG - tig0027382:44074-44093 None:intergenic 30.0%
! TTTTCATAGCTTGATGCATA+TGG - tig0027382:44130-44149 None:intergenic 30.0%
TTTCTAGATTGATGGAAACT+TGG + tig0027382:44152-44171 Msa1433650:CDS 30.0%
! AATCAGATTTGGTTGAGTTA+AGG - tig0027382:44288-44307 None:intergenic 30.0%
TTCAACTTGAACACAAAAGA+GGG + tig0027382:44349-44368 Msa1433650:CDS 30.0%
!!! CATTTTTCAAGCAAAGTAAG+AGG - tig0027382:44433-44452 None:intergenic 30.0%
CTCTTACTTTGCTTGAAAAA+TGG + tig0027382:44431-44450 Msa1433650:CDS 30.0%
!! GAAAAATGGCTTTTTGAAGA+TGG + tig0027382:44445-44464 Msa1433650:CDS 30.0%
!! AAAATGGCTTTTTGAAGATG+GGG + tig0027382:44447-44466 Msa1433650:CDS 30.0%
ACATGTTTATAAGCTCTTCA+TGG - tig0027382:44489-44508 None:intergenic 30.0%
GCTTATAAACATGTCATTAG+AGG + tig0027382:44495-44514 Msa1433650:CDS 30.0%
TGCTTGTAAGTGTAATTAAG+AGG - tig0027382:44671-44690 None:intergenic 30.0%
! AGTTCAATGTATGTGTGTTT+TGG + tig0027382:44765-44784 Msa1433650:three_prime_UTR 30.0%
TAGGGATTAAAAAAGGACCT+TGG + tig0027382:43156-43175 Msa1433650:CDS 35.0%
TAGAGCAATTATACCGGTAT+TGG - tig0027382:43255-43274 None:intergenic 35.0%
! AAGTTACCTCTTTTGATACC+TGG - tig0027382:43493-43512 None:intergenic 35.0%
ATGGAAAGTAAGATGTAGGA+AGG - tig0027382:43596-43615 None:intergenic 35.0%
TATGTGATGATTGCATCAGA+TGG + tig0027382:43783-43802 Msa1433650:intron 35.0%
ATGTGATGATTGCATCAGAT+GGG + tig0027382:43784-43803 Msa1433650:intron 35.0%
TAGCTTCATATCTTCCACAA+AGG + tig0027382:43813-43832 Msa1433650:CDS 35.0%
GATCAAAGTAGTAACGATGA+AGG + tig0027382:43893-43912 Msa1433650:CDS 35.0%
CTTTCCCATTGACCTTTATA+CGG - tig0027382:43947-43966 None:intergenic 35.0%
ATAAAGGTCAATGGGAAAGA+AGG + tig0027382:43948-43967 Msa1433650:CDS 35.0%
CATATGGAGATGGAATATTC+AGG - tig0027382:44114-44133 None:intergenic 35.0%
TTTGTTTCAGCTGATGAGTT+AGG - tig0027382:44187-44206 None:intergenic 35.0%
TCGAGATGCATAATCAGATT+TGG - tig0027382:44299-44318 None:intergenic 35.0%
CTGATTATGCATCTCGATTT+AGG + tig0027382:44302-44321 Msa1433650:CDS 35.0%
CTTCAACTTGAACACAAAAG+AGG + tig0027382:44348-44367 Msa1433650:CDS 35.0%
TATTAATCCTTTCCTCTTGG+TGG - tig0027382:44384-44403 None:intergenic 35.0%
!! AAATGGCTTTTTGAAGATGG+GGG + tig0027382:44448-44467 Msa1433650:CDS 35.0%
!! AACCTCTAGTTCTGAATTTC+AGG + tig0027382:44562-44581 Msa1433650:three_prime_UTR 35.0%
AACCTGAAATTCAGAACTAG+AGG - tig0027382:44567-44586 None:intergenic 35.0%
TAGGGATTAAAAAAGGACCT+TGG + tig0027382:43156-43175 Msa1433650:CDS 35.0%
TAGAGCAATTATACCGGTAT+TGG - tig0027382:43255-43274 None:intergenic 35.0%
! AAGTTACCTCTTTTGATACC+TGG - tig0027382:43493-43512 None:intergenic 35.0%
ATGGAAAGTAAGATGTAGGA+AGG - tig0027382:43596-43615 None:intergenic 35.0%
TATGTGATGATTGCATCAGA+TGG + tig0027382:43783-43802 Msa1433650:intron 35.0%
ATGTGATGATTGCATCAGAT+GGG + tig0027382:43784-43803 Msa1433650:intron 35.0%
TAGCTTCATATCTTCCACAA+AGG + tig0027382:43813-43832 Msa1433650:CDS 35.0%
GATCAAAGTAGTAACGATGA+AGG + tig0027382:43893-43912 Msa1433650:CDS 35.0%
CTTTCCCATTGACCTTTATA+CGG - tig0027382:43947-43966 None:intergenic 35.0%
ATAAAGGTCAATGGGAAAGA+AGG + tig0027382:43948-43967 Msa1433650:CDS 35.0%
CATATGGAGATGGAATATTC+AGG - tig0027382:44114-44133 None:intergenic 35.0%
TTTGTTTCAGCTGATGAGTT+AGG - tig0027382:44187-44206 None:intergenic 35.0%
TCGAGATGCATAATCAGATT+TGG - tig0027382:44299-44318 None:intergenic 35.0%
CTGATTATGCATCTCGATTT+AGG + tig0027382:44302-44321 Msa1433650:CDS 35.0%
CTTCAACTTGAACACAAAAG+AGG + tig0027382:44348-44367 Msa1433650:CDS 35.0%
TATTAATCCTTTCCTCTTGG+TGG - tig0027382:44384-44403 None:intergenic 35.0%
!! AAATGGCTTTTTGAAGATGG+GGG + tig0027382:44448-44467 Msa1433650:CDS 35.0%
!! AACCTCTAGTTCTGAATTTC+AGG + tig0027382:44562-44581 Msa1433650:three_prime_UTR 35.0%
AACCTGAAATTCAGAACTAG+AGG - tig0027382:44567-44586 None:intergenic 35.0%
CACCATGTTGTGAGAAACTA+GGG + tig0027382:43138-43157 Msa1433650:CDS 40.0%
ATCCCTAGTTTCTCACAACA+TGG - tig0027382:43143-43162 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+AGG - tig0027382:43176-43195 None:intergenic 40.0%
TACATTCAACAACATGGACC+TGG + tig0027382:43209-43228 Msa1433650:CDS 40.0%
AACAACATGGACCTGGTAAT+TGG + tig0027382:43216-43235 Msa1433650:CDS 40.0%
!! GCAATTATACCGGTATTGGT+GGG - tig0027382:43251-43270 None:intergenic 40.0%
! AGCAATTATACCGGTATTGG+TGG - tig0027382:43252-43271 None:intergenic 40.0%
AGGTGTGAGAGGAATGAATT+AGG - tig0027382:43576-43595 None:intergenic 40.0%
ATGTCATTGTCTGTCCTTTG+TGG - tig0027382:43830-43849 None:intergenic 40.0%
GGTTGTAGGGTTATGTTGAA+GGG - tig0027382:44023-44042 None:intergenic 40.0%
! GATGGAATATTCAGGTTTGG+TGG - tig0027382:44106-44125 None:intergenic 40.0%
! GGAGATGGAATATTCAGGTT+TGG - tig0027382:44109-44128 None:intergenic 40.0%
TAGCTTGATGCATATGGAGA+TGG - tig0027382:44124-44143 None:intergenic 40.0%
CATGTTGCTGAATATCGATG+AGG - tig0027382:44212-44231 None:intergenic 40.0%
ATCGATATTCAGCAACATGC+AGG + tig0027382:44213-44232 Msa1433650:CDS 40.0%
TCGATATTCAGCAACATGCA+GGG + tig0027382:44214-44233 Msa1433650:CDS 40.0%
AGCACAACACAAGATCATCA+TGG + tig0027382:44262-44281 Msa1433650:CDS 40.0%
CGATTTAGGTCAACTCATGA+AGG + tig0027382:44316-44335 Msa1433650:CDS 40.0%
GACTAGAGAACTCTAGCAAA+TGG + tig0027382:44630-44649 Msa1433650:three_prime_UTR 40.0%
GAGTCGATATGTGAATCTAC+TGG - tig0027382:43019-43038 None:intergenic 40.0%
CACCATGTTGTGAGAAACTA+GGG + tig0027382:43138-43157 Msa1433650:CDS 40.0%
ATCCCTAGTTTCTCACAACA+TGG - tig0027382:43143-43162 None:intergenic 40.0%
ATATCTTCTTCAGGAGTCCA+AGG - tig0027382:43176-43195 None:intergenic 40.0%
TACATTCAACAACATGGACC+TGG + tig0027382:43209-43228 Msa1433650:CDS 40.0%
AACAACATGGACCTGGTAAT+TGG + tig0027382:43216-43235 Msa1433650:CDS 40.0%
!! GCAATTATACCGGTATTGGT+GGG - tig0027382:43251-43270 None:intergenic 40.0%
! AGCAATTATACCGGTATTGG+TGG - tig0027382:43252-43271 None:intergenic 40.0%
AGGTGTGAGAGGAATGAATT+AGG - tig0027382:43576-43595 None:intergenic 40.0%
ATGTCATTGTCTGTCCTTTG+TGG - tig0027382:43830-43849 None:intergenic 40.0%
GGTTGTAGGGTTATGTTGAA+GGG - tig0027382:44023-44042 None:intergenic 40.0%
! GATGGAATATTCAGGTTTGG+TGG - tig0027382:44106-44125 None:intergenic 40.0%
! GGAGATGGAATATTCAGGTT+TGG - tig0027382:44109-44128 None:intergenic 40.0%
TAGCTTGATGCATATGGAGA+TGG - tig0027382:44124-44143 None:intergenic 40.0%
CATGTTGCTGAATATCGATG+AGG - tig0027382:44212-44231 None:intergenic 40.0%
ATCGATATTCAGCAACATGC+AGG + tig0027382:44213-44232 Msa1433650:CDS 40.0%
TCGATATTCAGCAACATGCA+GGG + tig0027382:44214-44233 Msa1433650:CDS 40.0%
AGCACAACACAAGATCATCA+TGG + tig0027382:44262-44281 Msa1433650:CDS 40.0%
CGATTTAGGTCAACTCATGA+AGG + tig0027382:44316-44335 Msa1433650:CDS 40.0%
GACTAGAGAACTCTAGCAAA+TGG + tig0027382:44630-44649 Msa1433650:three_prime_UTR 40.0%
CCTAGTTTCTCACAACATGG+TGG - tig0027382:43140-43159 None:intergenic 45.0%
CCACCATGTTGTGAGAAACT+AGG + tig0027382:43137-43156 Msa1433650:CDS 45.0%
GGAACAGATCTCCAATTACC+AGG - tig0027382:43230-43249 None:intergenic 45.0%
AGATCTGTTCCCACCAATAC+CGG + tig0027382:43239-43258 Msa1433650:CDS 45.0%
GTAAGAGCTGCAGACTTAGA+TGG + tig0027382:43452-43471 Msa1433650:CDS 45.0%
TGGACAAACTATCTTCGACC+AGG + tig0027382:43472-43491 Msa1433650:CDS 45.0%
CTTCGACCAGGTATCAAAAG+AGG + tig0027382:43484-43503 Msa1433650:CDS 45.0%
! TGTTCACCTCCAAGCTCTTT+TGG + tig0027382:43537-43556 Msa1433650:CDS 45.0%
! GTTCACCTCCAAGCTCTTTT+GGG + tig0027382:43538-43557 Msa1433650:CDS 45.0%
! AAGATGTAGGAAGGTGTGAG+AGG - tig0027382:43587-43606 None:intergenic 45.0%
AGCTGCCGTATAAAGGTCAA+TGG + tig0027382:43939-43958 Msa1433650:CDS 45.0%
GCTGCCGTATAAAGGTCAAT+GGG + tig0027382:43940-43959 Msa1433650:CDS 45.0%
! AGCCTCAGATAAGGCTTGTT+TGG - tig0027382:43996-44015 None:intergenic 45.0%
AAGGGACAAAGCCTCAGATA+AGG - tig0027382:44005-44024 None:intergenic 45.0%
GGGTTGTAGGGTTATGTTGA+AGG - tig0027382:44024-44043 None:intergenic 45.0%
CAACATAACCCTACAACCCT+TGG + tig0027382:44025-44044 Msa1433650:CDS 45.0%
! GCAAAGTACCAAGGGTTGTA+GGG - tig0027382:44036-44055 None:intergenic 45.0%
! CTGATCAGGCAAAGTACCAA+GGG - tig0027382:44044-44063 None:intergenic 45.0%
! TCTGATCAGGCAAAGTACCA+AGG - tig0027382:44045-44064 None:intergenic 45.0%
GATGAGGGTTTCATCTGATC+AGG - tig0027382:44058-44077 None:intergenic 45.0%
! CAGGGATCAAGTTGTAGTGA+AGG + tig0027382:44232-44251 Msa1433650:CDS 45.0%
TCTTCTTCCACCAAGAGGAA+AGG + tig0027382:44374-44393 Msa1433650:CDS 45.0%
CCTAGTTTCTCACAACATGG+TGG - tig0027382:43140-43159 None:intergenic 45.0%
CCACCATGTTGTGAGAAACT+AGG + tig0027382:43137-43156 Msa1433650:CDS 45.0%
GGAACAGATCTCCAATTACC+AGG - tig0027382:43230-43249 None:intergenic 45.0%
AGATCTGTTCCCACCAATAC+CGG + tig0027382:43239-43258 Msa1433650:CDS 45.0%
GTAAGAGCTGCAGACTTAGA+TGG + tig0027382:43452-43471 Msa1433650:CDS 45.0%
TGGACAAACTATCTTCGACC+AGG + tig0027382:43472-43491 Msa1433650:CDS 45.0%
CTTCGACCAGGTATCAAAAG+AGG + tig0027382:43484-43503 Msa1433650:CDS 45.0%
! TGTTCACCTCCAAGCTCTTT+TGG + tig0027382:43537-43556 Msa1433650:CDS 45.0%
! GTTCACCTCCAAGCTCTTTT+GGG + tig0027382:43538-43557 Msa1433650:CDS 45.0%
! AAGATGTAGGAAGGTGTGAG+AGG - tig0027382:43587-43606 None:intergenic 45.0%
AGCTGCCGTATAAAGGTCAA+TGG + tig0027382:43939-43958 Msa1433650:CDS 45.0%
GCTGCCGTATAAAGGTCAAT+GGG + tig0027382:43940-43959 Msa1433650:CDS 45.0%
! AGCCTCAGATAAGGCTTGTT+TGG - tig0027382:43996-44015 None:intergenic 45.0%
AAGGGACAAAGCCTCAGATA+AGG - tig0027382:44005-44024 None:intergenic 45.0%
GGGTTGTAGGGTTATGTTGA+AGG - tig0027382:44024-44043 None:intergenic 45.0%
CAACATAACCCTACAACCCT+TGG + tig0027382:44025-44044 Msa1433650:CDS 45.0%
! GCAAAGTACCAAGGGTTGTA+GGG - tig0027382:44036-44055 None:intergenic 45.0%
! CTGATCAGGCAAAGTACCAA+GGG - tig0027382:44044-44063 None:intergenic 45.0%
! TCTGATCAGGCAAAGTACCA+AGG - tig0027382:44045-44064 None:intergenic 45.0%
GATGAGGGTTTCATCTGATC+AGG - tig0027382:44058-44077 None:intergenic 45.0%
! CAGGGATCAAGTTGTAGTGA+AGG + tig0027382:44232-44251 Msa1433650:CDS 45.0%
TCTTCTTCCACCAAGAGGAA+AGG + tig0027382:44374-44393 Msa1433650:CDS 45.0%
TGTTGCCCAAAAGAGCTTGG+AGG - tig0027382:43546-43565 None:intergenic 50.0%
! TCCAAGCTCTTTTGGGCAAC+AGG + tig0027382:43545-43564 Msa1433650:CDS 50.0%
ACCTGTTGCCCAAAAGAGCT+TGG - tig0027382:43549-43568 None:intergenic 50.0%
! GGCCAAACAAGCCTTATCTG+AGG + tig0027382:43991-44010 Msa1433650:CDS 50.0%
! GGCAAAGTACCAAGGGTTGT+AGG - tig0027382:44037-44056 None:intergenic 50.0%
TGTTGCCCAAAAGAGCTTGG+AGG - tig0027382:43546-43565 None:intergenic 50.0%
! TCCAAGCTCTTTTGGGCAAC+AGG + tig0027382:43545-43564 Msa1433650:CDS 50.0%
ACCTGTTGCCCAAAAGAGCT+TGG - tig0027382:43549-43568 None:intergenic 50.0%
! GGCCAAACAAGCCTTATCTG+AGG + tig0027382:43991-44010 Msa1433650:CDS 50.0%
! GGCAAAGTACCAAGGGTTGT+AGG - tig0027382:44037-44056 None:intergenic 50.0%
CGTTCGCAGCTGCCGTATAA+AGG + tig0027382:43932-43951 Msa1433650:CDS 55.0%
GGGTCTCTTCTTCCACCAAG+AGG + tig0027382:44369-44388 Msa1433650:CDS 55.0%
CGTTCGCAGCTGCCGTATAA+AGG + tig0027382:43932-43951 Msa1433650:CDS 55.0%
GGGTCTCTTCTTCCACCAAG+AGG + tig0027382:44369-44388 Msa1433650:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0027382 gene 43018 44804 43018 ID=Msa1433650;Name=Msa1433650
tig0027382 mRNA 43018 44804 43018 ID=Msa1433650-mRNA-1;Parent=Msa1433650;Name=Msa1433650-mRNA-1;_AED=0.08;_eAED=0.08;_QI=107|1|1|1|1|1|3|264|334
tig0027382 exon 43018 43260 43018 ID=Msa1433650-mRNA-1:exon:8713;Parent=Msa1433650-mRNA-1
tig0027382 exon 43437 43566 43437 ID=Msa1433650-mRNA-1:exon:8714;Parent=Msa1433650-mRNA-1
tig0027382 exon 43802 44804 43802 ID=Msa1433650-mRNA-1:exon:8715;Parent=Msa1433650-mRNA-1
tig0027382 five_prime_UTR 43018 43124 43018 ID=Msa1433650-mRNA-1:five_prime_utr;Parent=Msa1433650-mRNA-1
tig0027382 CDS 43125 43260 43125 ID=Msa1433650-mRNA-1:cds;Parent=Msa1433650-mRNA-1
tig0027382 CDS 43437 43566 43437 ID=Msa1433650-mRNA-1:cds;Parent=Msa1433650-mRNA-1
tig0027382 CDS 43802 44540 43802 ID=Msa1433650-mRNA-1:cds;Parent=Msa1433650-mRNA-1
tig0027382 three_prime_UTR 44541 44804 44541 ID=Msa1433650-mRNA-1:three_prime_utr;Parent=Msa1433650-mRNA-1
Gene Sequence

>Msa1433650

ATGATGGGAAGGCCACCATGTTGTGAGAAACTAGGGATTAAAAAAGGACCTTGGACTCCTGAAGAAGATATCATCTTAGTTTCTTACATTCAACAACATGGACCTGGTAATTGGAGATCTGTTCCCACCAATACCGGTTTGATGAGATGTAGTAAGAGCTGCAGACTTAGATGGACAAACTATCTTCGACCAGGTATCAAAAGAGGTAACTTCACAGACCATGAAGAGAAAATGATTGTTCACCTCCAAGCTCTTTTGGGCAACAGATGGGCTGCTATAGCTTCATATCTTCCACAAAGGACAGACAATGACATAAAAAATTATTGGAATACACATTTAAAGAGGAAGATGAACAAAGATCAAAGTAGTAACGATGAAGGTGTTGATCAAGAATCTCGTTCGCAGCTGCCGTATAAAGGTCAATGGGAAAGAAGGCTACAAACAGATATTCATATGGCCAAACAAGCCTTATCTGAGGCTTTGTCCCTTCAACATAACCCTACAACCCTTGGTACTTTGCCTGATCAGATGAAACCCTCATCAAGTTTTTCTCATTCTCATGAACATCCACCAAACCTGAATATTCCATCTCCATATGCATCAAGCTATGAAAACATTTCTAGATTGATGGAAACTTGGATGAAATCACCTAACTCATCAGCTGAAACAAATTCCTCATCGATATTCAGCAACATGCAGGGATCAAGTTGTAGTGAAGGAGCACAAAGCACAACACAAGATCATCATGGCCTTAACTCAACCAAATCTGATTATGCATCTCGATTTAGGTCAACTCATGAAGGAAACAACAGCTTCAACTTGAACACAAAAGAGGGTCTCTTCTTCCACCAAGAGGAAAGGATTAATATTAAAGCAAATATGGAAACGGATGTTCCTCTTACTTTGCTTGAAAAATGGCTTTTTGAAGATGGGGGAGCAAGTCATGAGTGCCATGAAGAGCTTATAAACATGTCATTAGAGGGAACTACTTCAGATTTCTTTTAG
Protein sequence

>Msa1433650

MMGRPPCCEKLGIKKGPWTPEEDIILVSYIQQHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIVHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKRKMNKDQSSNDEGVDQESRSQLPYKGQWERRLQTDIHMAKQALSEALSLQHNPTTLGTLPDQMKPSSSFSHSHEHPPNLNIPSPYASSYENISRLMETWMKSPNSSAETNSSSIFSNMQGSSCSEGAQSTTQDHHGLNSTKSDYASRFRSTHEGNNSFNLNTKEGLFFHQEERINIKANMETDVPLTLLEKWLFEDGGASHECHEELINMSLEGTTSDFF*