AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041550 MtrunA17_Chr7g0268621 92.573 377 9 3 1 358 1 377 0.0 706
Msa1041550 MtrunA17_Chr7g0268611 66.667 369 104 3 6 355 8 376 1.13e-180 506
Msa1041550 MtrunA17_Chr3g0125701 47.594 374 175 5 3 356 4 376 1.17e-119 351
Msa1041550 MtrunA17_Chr3g0125711 47.059 374 177 5 3 356 4 376 2.02e-118 348
Msa1041550 MtrunA17_Chr3g0125691 47.059 374 177 5 3 356 4 376 1.92e-117 346
Msa1041550 MtrunA17_Chr8g0350371 45.455 374 185 3 1 355 1 374 1.17e-116 343
Msa1041550 MtrunA17_Chr5g0412881 46.257 374 182 3 1 355 1 374 8.31e-116 341
Msa1041550 MtrunA17_Chr1g0182991 44.063 379 185 5 7 361 26 401 3.87e-109 325
Msa1041550 MtrunA17_Chr7g0262591 44.327 379 180 7 7 361 25 396 3.38e-108 323
Msa1041550 MtrunA17_Chr3g0139441 45.067 375 181 5 7 357 40 413 3.45e-107 320
Msa1041550 MtrunA17_Chr1g0169111 45.333 375 179 6 7 356 103 476 4.13e-107 323
Msa1041550 MtrunA17_Chr1g0147221 45.040 373 179 6 7 355 43 413 1.54e-103 311
Msa1041550 MtrunA17_Chr6g0485621 44.681 376 180 8 7 355 33 407 2.88e-103 310
Msa1041550 MtrunA17_Chr1g0148801 42.091 373 188 7 7 356 17 384 7.81e-103 309
Msa1041550 MtrunA17_Chr7g0262471 40.764 314 158 7 67 361 213 517 2.54e-71 231
Msa1041550 MtrunA17_Chr4g0025641 45.320 203 93 2 3 187 13 215 4.05e-53 175
Msa1041550 MtrunA17_Chr4g0025651 44.382 178 96 3 187 362 1 177 1.23e-46 157
Msa1041550 MtrunA17_Chr3g0129991 38.462 117 54 2 66 164 3 119 1.56e-18 80.5
Msa1041550 MtrunA17_Chr3g0130001 58.140 43 18 0 1 43 1 43 1.51e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041550 AT1G48910.1 46.505 372 180 3 3 355 2 373 2.09e-121 355
Msa1041550 AT1G21430.1 45.722 374 179 5 6 358 9 379 1.38e-110 328
Msa1041550 AT5G43890.1 43.117 385 190 6 7 363 26 409 1.62e-107 322
Msa1041550 AT1G04610.1 44.947 376 180 6 7 356 38 412 2.09e-107 322
Msa1041550 AT1G04180.1 43.750 384 186 6 7 363 26 406 2.74e-106 318
Msa1041550 AT4G13260.1 43.968 373 184 6 7 355 29 400 4.25e-105 315
Msa1041550 AT5G25620.1 44.267 375 180 7 7 355 33 404 1.54e-104 314
Msa1041550 AT5G25620.2 44.267 375 180 7 7 355 33 404 2.01e-104 314
Msa1041550 AT4G28720.1 42.667 375 188 7 7 355 26 399 2.64e-104 313
Msa1041550 AT4G32540.1 40.909 374 191 5 7 356 22 389 2.13e-96 293
Msa1041550 AT4G32540.2 41.333 375 190 5 7 356 22 391 3.23e-96 293
Msa1041550 AT5G11320.1 41.555 373 188 6 7 356 18 383 5.92e-96 291
Msa1041550 AT2G33230.1 43.617 376 184 7 7 356 33 406 1.40e-95 291
Msa1041550 AT5G11320.2 41.796 323 158 6 7 306 18 333 2.86e-80 249
Msa1041550 AT4G13260.2 45.035 282 132 4 7 265 29 310 3.09e-80 248
Msa1041550 AT4G13260.3 39.863 291 155 5 84 355 8 297 2.56e-67 215

Find 183 sgRNAs with CRISPR-Local

Find 595 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAAGGGGCATGCTGAATT+TGG 0.136935 7_1:+79137516 Msa1041550:three_prime_UTR
CTCTTCAACCCTTCAATTTC+AGG 0.149369 7_1:-79136556 None:intergenic
TCTAGGGATATGATGTATTA+TGG 0.157138 7_1:+79131411 Msa1041550:CDS
GTTGTTGGTTCTGGTAATTC+TGG 0.206192 7_1:+79130338 Msa1041550:CDS
GTACTTGACCTTCATATAAA+AGG 0.212639 7_1:-79137656 None:intergenic
TCAAGGGGCATGCTGAATTT+GGG 0.236398 7_1:+79137517 Msa1041550:three_prime_UTR
TACGGAGATGTCACAAATTA+TGG 0.238324 7_1:+79137610 Msa1041550:three_prime_UTR
GTTGTTGGGTCTGGAAATTC+TGG 0.242416 7_1:+79136649 Msa1041550:three_prime_UTR
AAACAGTTCATAGAATATTT+AGG 0.244234 7_1:+79130041 Msa1041550:intron
GTTGTTGGAGCAGGCCCTTC+TGG 0.254075 7_1:+79136145 Msa1041550:three_prime_UTR
CATGTTCTTGTTGTTGGTTC+TGG 0.258207 7_1:+79130329 Msa1041550:CDS
ACAGTTCCCACGTCAATTAT+AGG 0.258397 7_1:-79131582 None:intergenic
TCAAGAGATCAACTCATAAA+TGG 0.262238 7_1:+79132051 Msa1041550:CDS
GATGGTGATGCTTAGTAAAA+TGG 0.287383 7_1:+79137585 Msa1041550:three_prime_UTR
GGTGAAGTTGAGGAGTATTC+TGG 0.306966 7_1:+79130176 Msa1041550:CDS
AATTAAGTCTCAAGAGTTAA+AGG 0.323090 7_1:+79137717 Msa1041550:three_prime_UTR
TCAACAGCTCTGTTGTATAT+AGG 0.326418 7_1:-79130092 None:intergenic
GGAGTATTCTGGAAGATTCT+TGG 0.331314 7_1:+79130187 Msa1041550:CDS
TCTCTTTCGAGGATTGTATA+AGG 0.332947 7_1:-79136205 None:intergenic
TATGGAGATTGCTTTAGATT+TGG 0.339070 7_1:+79130361 Msa1041550:CDS
TTCTTTCCCTTCCAATGAAT+GGG 0.339539 7_1:-79139928 None:intergenic
CTAGGGATATGATGTATTAT+GGG 0.339983 7_1:+79131412 Msa1041550:CDS
GAAGGTGAAGGCTATGAATA+AGG 0.342960 7_1:+79136459 Msa1041550:three_prime_UTR
CATGTTCTTGTTGTTGGGTC+TGG 0.344499 7_1:+79136640 Msa1041550:three_prime_UTR
CTTGCCATACTTCATCTTCA+TGG 0.350512 7_1:-79131556 None:intergenic
AAGTATAAGCTTCAAACATA+TGG 0.353044 7_1:+79140193 Msa1041550:three_prime_UTR
GATGAGCATGTTCTTGTTGT+TGG 0.358206 7_1:+79130323 Msa1041550:CDS
CAACAGCTCTGTTGTATATA+GGG 0.358349 7_1:-79130091 None:intergenic
AATGAAAGAGTGATAGTTGT+TGG 0.360593 7_1:+79136130 Msa1041550:three_prime_UTR
CATTCAACTGGGTTTAAGAA+TGG 0.361675 7_1:+79136598 Msa1041550:three_prime_UTR
ACATATATCAATTTCTTTGA+CGG 0.365198 7_1:-79140328 None:intergenic
GATGAACATGTTCTTGTTGT+TGG 0.376175 7_1:+79136634 Msa1041550:three_prime_UTR
ATGCTTAGTAAAATGGTTTA+CGG 0.376808 7_1:+79137592 Msa1041550:three_prime_UTR
ATTCTTTCCCTTCCAATGAA+TGG 0.379709 7_1:-79139929 None:intergenic
AAGCGCAAGTATAAATATAT+AGG 0.381462 7_1:-79135996 None:intergenic
AGCCAAGTTACCCCATTCAT+TGG 0.391009 7_1:+79139917 Msa1041550:three_prime_UTR
ATCTACCCACAAATGGCTTA+AGG 0.395665 7_1:+79139579 Msa1041550:three_prime_UTR
GCTTTAGATTTGGCTAACTT+TGG 0.396250 7_1:+79130371 Msa1041550:CDS
GGGAAAGTGATTCATTCAAC+TGG 0.397373 7_1:+79136586 Msa1041550:three_prime_UTR
ATGATGAAGGTTCTGAGAAA+TGG 0.397382 7_1:+79136437 Msa1041550:three_prime_UTR
TTCCAATGAATGGGGTAACT+TGG 0.399943 7_1:-79139919 None:intergenic
CCTTCAATTTCAGGTACAAA+AGG 0.400011 7_1:-79136547 None:intergenic
CTATCAAGGAGAGGTTTCTA+TGG 0.400558 7_1:+79139970 Msa1041550:three_prime_UTR
AAGGTTCCAACGTCAATAAT+AGG 0.402511 7_1:-79137688 None:intergenic
ACTGTCAAGAAAATCAAATC+TGG 0.404277 7_1:+79131600 Msa1041550:CDS
ATATATATATACACAATAGA+TGG 0.406133 7_1:+79136066 Msa1041550:three_prime_UTR
GAAACCAGTGCAGAAAATAA+TGG 0.408371 7_1:-79132030 None:intergenic
ATTCAACTGGGTTTAAGAAT+GGG 0.409379 7_1:+79136599 Msa1041550:three_prime_UTR
CAGAAAATAATGGAGTCAAA+TGG 0.413696 7_1:-79132020 None:intergenic
TTCACCATGAAGATGAAGTA+TGG 0.415407 7_1:+79131552 Msa1041550:CDS
AGTATAAGCTTCAAACATAT+GGG 0.421207 7_1:+79140194 Msa1041550:three_prime_UTR
ATCAACTCATAAATGGCTTA+AGG 0.422879 7_1:+79132058 Msa1041550:CDS
AAAGCTGAGAATAAGAGTTC+TGG 0.427642 7_1:+79130155 Msa1041550:CDS
GCAAGCTGCCGTGGCTAGGC+CGG 0.428176 7_1:-79129853 None:intergenic
CAAGGGGCATGCTGAATTTG+GGG 0.432338 7_1:+79137518 Msa1041550:three_prime_UTR
AATCAAATCTGGAGAAATAC+AGG 0.435570 7_1:+79131611 Msa1041550:CDS
TTCTGGAATGGAAATTGCAT+TGG 0.445243 7_1:+79136666 Msa1041550:three_prime_UTR
TCCAAACCTTAAGCCATTTG+TGG 0.447999 7_1:-79139585 None:intergenic
CATATAAAAGGGACCCTCGC+TGG 0.449889 7_1:-79137644 None:intergenic
TGTATTGTGTTGGACTATCA+AGG 0.452297 7_1:+79139956 Msa1041550:three_prime_UTR
TATGGAGATCTGAGCAAATA+TGG 0.453306 7_1:+79131504 Msa1041550:CDS
ATGAATGGGGTAACTTGGCT+TGG 0.456277 7_1:-79139914 None:intergenic
ACTTCATCTTCATGGTGAAC+GGG 0.456709 7_1:-79131548 None:intergenic
GAAGCACCGGTGATAATAAT+CGG 0.458478 7_1:+79129819 Msa1041550:CDS
AAGGCTATGAATAAGGATTC+CGG 0.459058 7_1:+79136466 Msa1041550:three_prime_UTR
TGAGGATAAGAAGGTGGAAA+AGG 0.459298 7_1:-79130005 None:intergenic
AGAAAATAATGGAGTCAAAT+GGG 0.459670 7_1:-79132019 None:intergenic
TTAAGCAAGCTGCCGTGGCT+AGG 0.460122 7_1:-79129857 None:intergenic
TGGTATGGTAAACCAGGCTT+TGG 0.460923 7_1:-79132925 None:intergenic
ATAATCGGAGCTGGAACATC+CGG 0.461025 7_1:+79129834 Msa1041550:CDS
AGTTGAATGAATCACTTTCC+CGG 0.461841 7_1:-79136584 None:intergenic
AAGAATGGTTTGTATTGTGT+TGG 0.466251 7_1:+79139946 Msa1041550:three_prime_UTR
TAAGGATTCCGGTGAGGTTG+AGG 0.466347 7_1:+79136477 Msa1041550:three_prime_UTR
ATGAACATGTTCTTGTTGTT+GGG 0.471420 7_1:+79136635 Msa1041550:three_prime_UTR
TACTTGACCTTCATATAAAA+GGG 0.473078 7_1:-79137655 None:intergenic
TGGTTCTGGTAATTCTGGTA+TGG 0.475788 7_1:+79130343 Msa1041550:CDS
ATGTTGATGATGATGAGAAA+TGG 0.476343 7_1:+79130126 Msa1041550:CDS
CCAAACCTTAAGCCATTTGT+GGG 0.476994 7_1:-79139584 None:intergenic
CTGCGTTGGGTTGTCAAGGA+GGG 0.478723 7_1:+79132972 Msa1041550:CDS
CCTCGTGTACCTGAGGTTGA+AGG 0.480789 7_1:+79130236 Msa1041550:CDS
TTCGAGGATTGTATAAGGAA+TGG 0.481468 7_1:-79136200 None:intergenic
TTCAATCATTGTTAGAAGCC+CGG 0.486770 7_1:+79130403 Msa1041550:CDS
TTCTTACCCTTCCAATGGTA+TGG 0.487301 7_1:-79132940 None:intergenic
TAAGAGTTCTGGTGAAGTTG+AGG 0.487568 7_1:+79130166 Msa1041550:CDS
TTCCATCACGGAACAACACT+TGG 0.488765 7_1:-79131989 None:intergenic
TTCGAGAATGATGAAAGGTA+TGG 0.490300 7_1:-79129889 None:intergenic
GGGCTTCTAACAATGATTGA+AGG 0.491991 7_1:-79130401 None:intergenic
CTTATGCATTCTATTTCTAC+CGG 0.492161 7_1:-79139481 None:intergenic
ATTCATTGGAAGGGAAAGAA+TGG 0.492375 7_1:+79139931 Msa1041550:three_prime_UTR
GAATACCATCATCATTCAAA+AGG 0.492685 7_1:-79139891 None:intergenic
ACTAGTTTCTCCACCGTGCT+TGG 0.493688 7_1:-79131459 None:intergenic
CTCTCCAACCCTTCAACCTC+AGG 0.498735 7_1:-79130245 None:intergenic
TTCATATTCCTCAACCTCAC+CGG 0.503302 7_1:-79136485 None:intergenic
TGCGTTGGGTTGTCAAGGAG+GGG 0.503567 7_1:+79132973 Msa1041550:CDS
TTCAATCGTTGTTCGAAGCA+AGG 0.504367 7_1:+79136714 Msa1041550:three_prime_UTR
GGTACATAGTGAGGATAAGA+AGG 0.504694 7_1:-79130014 None:intergenic
TGAATGGGGTAACTTGGCTT+GGG 0.505766 7_1:-79139913 None:intergenic
CTTATGCTCTCTATTTCTGC+TGG 0.510758 7_1:-79131960 None:intergenic
GCAGAAATAGAGAGCATAAG+TGG 0.510770 7_1:+79131963 Msa1041550:CDS
TCTGATGAAGTATTTGTCAA+TGG 0.510851 7_1:+79137546 Msa1041550:three_prime_UTR
GATGTCACAAATTATGGAGT+TGG 0.515768 7_1:+79137616 Msa1041550:three_prime_UTR
ATATAAAAGGGACCCTCGCT+GGG 0.519555 7_1:-79137643 None:intergenic
TCAAGAGATCTACCCACAAA+TGG 0.521241 7_1:+79139572 Msa1041550:three_prime_UTR
AGCAAATGATATTGCTATGC+TGG 0.521351 7_1:+79133029 Msa1041550:CDS
TACTTCATCTTCATGGTGAA+CGG 0.522181 7_1:-79131549 None:intergenic
ATAGCAAGCAGGATTGTGTA+TGG 0.524380 7_1:+79131486 Msa1041550:CDS
AACGGGCCTTCACTAGGAAA+AGG 0.524492 7_1:-79131531 None:intergenic
AGCCTGGTTTACCATACCAT+TGG 0.525475 7_1:+79132929 Msa1041550:CDS
CTTCAATTTCAGGTACAAAA+GGG 0.526666 7_1:-79136546 None:intergenic
AGGAGAGGTTTCTATGGAGC+TGG 0.527357 7_1:+79139976 Msa1041550:three_prime_UTR
GGAATGTATGATGGAAAAGA+AGG 0.532095 7_1:-79136325 None:intergenic
AGATTCTTGGTTGTTGCTAG+TGG 0.534441 7_1:+79130200 Msa1041550:CDS
TTTACTGCGTTGGGTTGTCA+AGG 0.536045 7_1:+79132968 Msa1041550:CDS
AAGTTACCCCATTCATTGGA+AGG 0.536623 7_1:+79139921 Msa1041550:three_prime_UTR
ATGGTGAACGGGCCTTCACT+AGG 0.550940 7_1:-79131537 None:intergenic
AGGTTGAGGAATATGAAGGA+AGG 0.551335 7_1:+79136491 Msa1041550:three_prime_UTR
ATGTATGATGGAAAAGAAGG+TGG 0.552215 7_1:-79136322 None:intergenic
AATAAGCACTAGTAACAAAA+CGG 0.553856 7_1:+79135965 Msa1041550:exon
GTGGGTAGATCTCTTGAAGC+CGG 0.553863 7_1:-79139566 None:intergenic
GATGGAAAAGAAGGTGGGAA+TGG 0.556044 7_1:-79136316 None:intergenic
TAAAATAAAGATCAAAGGAG+AGG 0.557282 7_1:+79140155 Msa1041550:three_prime_UTR
TGGAACATCCGGCCTAGCCA+CGG 0.560221 7_1:+79129845 Msa1041550:CDS
GGATTGTATAAGGAATGGAT+TGG 0.560650 7_1:-79136195 None:intergenic
TCAACGATCACGACGATATG+CGG 0.562313 7_1:-79140093 None:intergenic
AACCGTTCTTACCCTTCCAA+TGG 0.562914 7_1:-79132945 None:intergenic
TGGTTTACCATACCATTGGA+AGG 0.564287 7_1:+79132933 Msa1041550:CDS
AACTAGTGGTGATAGCAAGC+AGG 0.566788 7_1:+79131475 Msa1041550:CDS
AGAGTGATAGTTGTTGGAGC+AGG 0.568437 7_1:+79136136 Msa1041550:three_prime_UTR
CGTTGATTAGATGTCAGTTG+AGG 0.569273 7_1:+79140110 Msa1041550:three_prime_UTR
CTCGTGTACCTGAGGTTGAA+GGG 0.572413 7_1:+79130237 Msa1041550:CDS
CAAGTTTCCTATAATTGACG+TGG 0.574376 7_1:+79131575 Msa1041550:CDS
TAACAGAATGCATGAAGCAC+CGG 0.575824 7_1:+79129806 None:intergenic
TAGGGATATGATGTATTATG+GGG 0.576351 7_1:+79131413 Msa1041550:CDS
CCGGTGATAATAATCGGAGC+TGG 0.577061 7_1:+79129825 Msa1041550:CDS
ACTGCGTTGGGTTGTCAAGG+AGG 0.577065 7_1:+79132971 Msa1041550:CDS
GAGAATGCAGAGTATGATGA+AGG 0.578252 7_1:+79136424 Msa1041550:three_prime_UTR
AACCAAGTGTTGTTCCGTGA+TGG 0.578671 7_1:+79131987 Msa1041550:CDS
GTATTTGTCAATGGAGATGG+TGG 0.579490 7_1:+79137555 Msa1041550:three_prime_UTR
GTAGAAATAGAATGCATAAG+TGG 0.579593 7_1:+79139484 Msa1041550:three_prime_UTR
TAACTATCTGTCACCAAGCA+CGG 0.580671 7_1:+79131446 Msa1041550:CDS
CCAGCTCCGATTATTATCAC+CGG 0.581468 7_1:-79129825 None:intergenic
AATAATGGAGTCAAATGGGT+AGG 0.582608 7_1:-79132015 None:intergenic
GGAAAGTGATTCATTCAACT+GGG 0.587347 7_1:+79136587 Msa1041550:three_prime_UTR
TTCCAATGGTATGGTAAACC+AGG 0.588965 7_1:-79132931 None:intergenic
GAAGGTGGAAAAGGAAAGTG+TGG 0.589595 7_1:-79129996 None:intergenic
ATTTATAAAATAAAGATCAA+AGG 0.590359 7_1:+79140150 Msa1041550:three_prime_UTR
TGTATGATGGAAAAGAAGGT+GGG 0.596307 7_1:-79136321 None:intergenic
GAAGTATTTGTCAATGGAGA+TGG 0.597497 7_1:+79137552 Msa1041550:three_prime_UTR
AGTTACCCCATTCATTGGAA+GGG 0.599221 7_1:+79139922 Msa1041550:three_prime_UTR
TGGGTCTGGAAATTCTGGAA+TGG 0.600936 7_1:+79136654 Msa1041550:three_prime_UTR
GCTGCTACTGAGAGACCAGA+AGG 0.602816 7_1:-79136160 None:intergenic
GAAGGTGGGAATGGTTTGTG+AGG 0.606122 7_1:-79136307 None:intergenic
GGTGAGGTTGAGGAATATGA+AGG 0.608479 7_1:+79136487 Msa1041550:three_prime_UTR
ACATAGTGAGGATAAGAAGG+TGG 0.610879 7_1:-79130011 None:intergenic
AGCTGAACCTCGTGTACCTG+AGG 0.611922 7_1:+79130229 Msa1041550:CDS
TGTGTTGGACTATCAAGGAG+AGG 0.616154 7_1:+79139961 Msa1041550:three_prime_UTR
TCACAAATTATGGAGTTGGT+AGG 0.617407 7_1:+79137620 Msa1041550:three_prime_UTR
TCCACTGTTCTGTGATACAG+AGG 0.617971 7_1:-79136403 None:intergenic
AGGTTTCTATGGAGCTGGTG+CGG 0.619956 7_1:+79139981 Msa1041550:three_prime_UTR
GGAGATGGTGGATTCAATGA+TGG 0.623038 7_1:+79137567 Msa1041550:three_prime_UTR
TTCTGAGAAATGGAAGGTGA+AGG 0.623363 7_1:+79136447 Msa1041550:three_prime_UTR
TCTTTCCCTTCCAATGAATG+GGG 0.623661 7_1:-79139927 None:intergenic
TCTCTTTCGAGAATGATGAA+AGG 0.630107 7_1:-79129894 None:intergenic
GGTTTACCATACCATTGGAA+GGG 0.632374 7_1:+79132934 Msa1041550:CDS
TTGATGATGATGAGAAATGG+AGG 0.634704 7_1:+79130129 Msa1041550:CDS
GCATTGGATCTTATCAACCA+TGG 0.635858 7_1:+79136682 Msa1041550:three_prime_UTR
GGAGTTGGTAGGCCCAGCGA+GGG 0.635996 7_1:+79137631 Msa1041550:three_prime_UTR
TACCATTGGAAGGGTAAGAA+CGG 0.636293 7_1:+79132943 Msa1041550:CDS
AAGTATCCTATTATTGACGT+TGG 0.642218 7_1:+79137682 Msa1041550:three_prime_UTR
ATGAAGATGAACACGATCGT+AGG 0.646942 7_1:-79129949 None:intergenic
CTGCTACTGAGAGACCAGAA+GGG 0.656151 7_1:-79136159 None:intergenic
GTATAAGCTTCAAACATATG+GGG 0.660534 7_1:+79140195 Msa1041550:three_prime_UTR
AAGTTTCCTATAATTGACGT+GGG 0.672849 7_1:+79131576 Msa1041550:CDS
ATATATGGCTATTATAGACA+AGG 0.673233 7_1:-79136043 None:intergenic
CCTTCAACCTCAGGTACACG+AGG 0.674313 7_1:-79130236 None:intergenic
TGGAGTTGGTAGGCCCAGCG+AGG 0.683293 7_1:+79137630 Msa1041550:three_prime_UTR
TGAAGGTTCTGAGAAATGGA+AGG 0.688803 7_1:+79136441 Msa1041550:three_prime_UTR
TCCTCTGTATCACAGAACAG+TGG 0.693621 7_1:+79136402 Msa1041550:three_prime_UTR
AGGGATATGATGTATTATGG+GGG 0.700343 7_1:+79131414 Msa1041550:CDS
TGATGATGATGAGAAATGGA+GGG 0.722234 7_1:+79130130 Msa1041550:CDS
TATGAATAAGGATTCCGGTG+AGG 0.731006 7_1:+79136471 Msa1041550:three_prime_UTR
CTATCTGTCACCAAGCACGG+TGG 0.746358 7_1:+79131449 Msa1041550:CDS
AAGCACGGTGGAGAAACTAG+TGG 0.756921 7_1:+79131461 Msa1041550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATTTTGTATATATGT+AGG + chr7_1:79131932-79131951 Msa1041550:intron 10.0%
!!! ATTAGAAAAAAGTATATAAA+TGG - chr7_1:79132432-79132451 None:intergenic 10.0%
!!! CATAATTTTATTGATAATTT+AGG + chr7_1:79133210-79133229 Msa1041550:intron 10.0%
!!! TTTTTGCTTATATTTTATTT+TGG + chr7_1:79133777-79133796 Msa1041550:intron 10.0%
!! CAATAAAAAATAATCATAAA+AGG - chr7_1:79134429-79134448 None:intergenic 10.0%
!!! TAATTTTTTTATGGTTTTTT+AGG - chr7_1:79135329-79135348 None:intergenic 10.0%
!!! GCTTTTATATAATTTTTTTA+TGG - chr7_1:79135338-79135357 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTGAG+GGG - chr7_1:79135457-79135476 None:intergenic 10.0%
!! TTATTATTAAAGAAATGATA+GGG - chr7_1:79135570-79135589 None:intergenic 10.0%
!! TTTATTATTAAAGAAATGAT+AGG - chr7_1:79135571-79135590 None:intergenic 10.0%
!! TGTGTATATATATATATATA+TGG - chr7_1:79136061-79136080 None:intergenic 10.0%
!! TAGAATAAATATATAAATGA+CGG + chr7_1:79137252-79137271 Msa1041550:intron 10.0%
!! TAATATATTCAATATAGTAT+TGG - chr7_1:79138155-79138174 None:intergenic 10.0%
!! ATCATTAAATCAAAATAATT+TGG + chr7_1:79138436-79138455 Msa1041550:intron 10.0%
!!! AGTTTTTTATTTTTAAAACT+CGG + chr7_1:79138798-79138817 Msa1041550:intron 10.0%
!!! TAATTAATTATTTTTTGGTA+GGG + chr7_1:79139859-79139878 Msa1041550:intron 10.0%
!! ATTTATAAAATAAAGATCAA+AGG + chr7_1:79140150-79140169 Msa1041550:three_prime_UTR 10.0%
!!! TAATTTTTATTTTTGCTAGT+TGG + chr7_1:79130894-79130913 Msa1041550:intron 15.0%
!!! TCATTTGAGTTTTTTTTTAT+TGG - chr7_1:79131293-79131312 None:intergenic 15.0%
!!! TATATACTTTTTAATATACC+AGG - chr7_1:79132149-79132168 None:intergenic 15.0%
!!! GGTATATTAAAAAGTATATA+TGG + chr7_1:79132149-79132168 Msa1041550:intron 15.0%
!!! TTTTAATATTCATGTTGTAT+AGG - chr7_1:79133321-79133340 None:intergenic 15.0%
!!! AACATTTTTAAAACATGAAA+AGG - chr7_1:79133853-79133872 None:intergenic 15.0%
!! TGAACAATAAAAAACTTAAA+AGG - chr7_1:79134015-79134034 None:intergenic 15.0%
!! CATTAATTAATTCAATAGAA+AGG + chr7_1:79134068-79134087 Msa1041550:intron 15.0%
!!! CAATTAAAAAGTTTTTTTGA+AGG - chr7_1:79134344-79134363 None:intergenic 15.0%
!! ATGATAATAATAATAACAAG+AGG + chr7_1:79135527-79135546 Msa1041550:intron 15.0%
!!! TACTTTATAAAAGTATTGTA+AGG + chr7_1:79135676-79135695 Msa1041550:intron 15.0%
!!! ACTTTATAAAAGTATTGTAA+GGG + chr7_1:79135677-79135696 Msa1041550:intron 15.0%
!! TGCTTAAAAATAATTTGATA+TGG - chr7_1:79135890-79135909 None:intergenic 15.0%
!! TTATCATTTATTCATTTCAA+TGG + chr7_1:79135916-79135935 Msa1041550:intron 15.0%
!! ATATATATATACACAATAGA+TGG + chr7_1:79136066-79136085 Msa1041550:three_prime_UTR 15.0%
!!! TATTGTAAAAACTTTTGTTT+AGG - chr7_1:79136349-79136368 None:intergenic 15.0%
!! AAAACAAAACAAAAAACATT+TGG - chr7_1:79136818-79136837 None:intergenic 15.0%
!! AGAATAAATATATAAATGAC+GGG + chr7_1:79137253-79137272 Msa1041550:intron 15.0%
!! AAAATAAAGGATTAAATTGA+TGG + chr7_1:79137947-79137966 Msa1041550:intron 15.0%
!!! TTTATTATTTTAGATTGGTT+TGG - chr7_1:79138380-79138399 Msa1041560:intron 15.0%
!!! CATTGTTTATTATTTTAGAT+TGG - chr7_1:79138385-79138404 Msa1041560:intron 15.0%
!! AATAAACAATGTAATTAGAA+TGG + chr7_1:79138394-79138413 Msa1041550:intron 15.0%
!!! CAAATATTTTGTTTTTCAAA+GGG - chr7_1:79138722-79138741 Msa1041560:intron 15.0%
!!! ACAAATATTTTGTTTTTCAA+AGG - chr7_1:79138723-79138742 Msa1041560:intron 15.0%
!! TAAAAATAGCGAAATTAAAA+AGG + chr7_1:79138752-79138771 Msa1041550:intron 15.0%
!! TTTGCATAAACAAATTTATT+AGG - chr7_1:79139151-79139170 None:intergenic 15.0%
!! AACAAATTTATTTAAGTGAA+AGG + chr7_1:79139159-79139178 Msa1041550:intron 15.0%
!!! TAACTTTTTTTTTGAAAGAA+AGG + chr7_1:79139187-79139206 Msa1041550:intron 15.0%
!! TAATATATGTTACATGAAAA+TGG + chr7_1:79139769-79139788 Msa1041550:intron 15.0%
!!! CTAATTAATTATTTTTTGGT+AGG + chr7_1:79139858-79139877 Msa1041550:intron 15.0%
!!! AATTAATTATTTTTTGGTAG+GGG + chr7_1:79139860-79139879 Msa1041550:intron 15.0%
!! ATTAAAAAGTGAATAAATTG+TGG - chr7_1:79140277-79140296 None:intergenic 15.0%
!!! TATTCTATGAACTGTTTTTT+GGG - chr7_1:79130038-79130057 None:intergenic 20.0%
!!! ATATTCTATGAACTGTTTTT+TGG - chr7_1:79130039-79130058 None:intergenic 20.0%
!! AAACAGTTCATAGAATATTT+AGG + chr7_1:79130041-79130060 Msa1041550:intron 20.0%
!!! ACATAGAATTTTGTTAATAC+CGG - chr7_1:79130425-79130444 None:intergenic 20.0%
!! TCAAAATTCAACTATGAAAA+TGG + chr7_1:79130594-79130613 Msa1041550:intron 20.0%
!!! TTTGATAGTTGATTTAAGAT+AGG - chr7_1:79130638-79130657 None:intergenic 20.0%
!! ATATTTGCTTCTTAAAATCA+CGG + chr7_1:79131148-79131167 Msa1041550:intron 20.0%
!!! TTTTTTTTATTGGTCACTTA+GGG - chr7_1:79131283-79131302 None:intergenic 20.0%
!!! TTTTTTTTTATTGGTCACTT+AGG - chr7_1:79131284-79131303 None:intergenic 20.0%
!!! TAAGTAGATAAATTGCATTT+TGG - chr7_1:79131345-79131364 None:intergenic 20.0%
!!! TATTTTTCACTTTGCTTTTA+TGG + chr7_1:79132347-79132366 Msa1041550:intron 20.0%
!!! CAACATACAATTATTTTGAT+TGG - chr7_1:79132708-79132727 None:intergenic 20.0%
!! ACATGAAAGAAATTAAGAAT+TGG + chr7_1:79133059-79133078 Msa1041550:intron 20.0%
!! CATGAAAGAAATTAAGAATT+GGG + chr7_1:79133060-79133079 Msa1041550:intron 20.0%
!! GATTCTTAAACCTTAATTTA+TGG - chr7_1:79133162-79133181 None:intergenic 20.0%
!!! AACATACAGTTTTAACTTTT+GGG - chr7_1:79133259-79133278 None:intergenic 20.0%
!!! AAACATACAGTTTTAACTTT+TGG - chr7_1:79133260-79133279 None:intergenic 20.0%
!!! TTTTTCCATAACAACAATTA+AGG - chr7_1:79133465-79133484 None:intergenic 20.0%
!! ACAATACATTGTAATATGTA+GGG + chr7_1:79133521-79133540 Msa1041550:intron 20.0%
!! TTGTTTATATTTCATTCATG+AGG - chr7_1:79133691-79133710 None:intergenic 20.0%
!! TGATAGTTGAAATGTTAATA+TGG + chr7_1:79133714-79133733 Msa1041550:intron 20.0%
!!! AGTTAAAAAGTTGATGTATA+TGG - chr7_1:79133753-79133772 None:intergenic 20.0%
!!! AATGCACTTTAAAATTTGAA+AGG - chr7_1:79134052-79134071 None:intergenic 20.0%
!!! TCGTGTTTTTTTTTTCAAAA+TGG + chr7_1:79134249-79134268 Msa1041550:intron 20.0%
!!! ATATATTTTGTCTTCTCTAA+CGG + chr7_1:79134393-79134412 Msa1041550:intron 20.0%
!! TATTGTTTAACATTAAAGCA+TGG + chr7_1:79134444-79134463 Msa1041550:intron 20.0%
!! ATTGTTTAACATTAAAGCAT+GGG + chr7_1:79134445-79134464 Msa1041550:intron 20.0%
!! TCAATGGTTACATTATATAT+TGG + chr7_1:79134551-79134570 Msa1041550:intron 20.0%
!!! CATATTTGACTAAAGTTTTA+TGG - chr7_1:79134671-79134690 None:intergenic 20.0%
!! AATATGTTGAGTCTATATAA+AGG - chr7_1:79134803-79134822 None:intergenic 20.0%
!!! ATAAAAGCATAAATAGCTTA+CGG + chr7_1:79135350-79135369 Msa1041550:intron 20.0%
!!! TATGTAGTATATTTGCTTTT+GGG - chr7_1:79135378-79135397 None:intergenic 20.0%
!!! TTATGTAGTATATTTGCTTT+TGG - chr7_1:79135379-79135398 None:intergenic 20.0%
!! AAATATACTACATAAGTAGT+AGG + chr7_1:79135384-79135403 Msa1041550:intron 20.0%
!! ATACAAATATATATACCTGT+AGG + chr7_1:79135593-79135612 Msa1041550:intron 20.0%
!!! CTTTATAAAAGTATTGTAAG+GGG + chr7_1:79135678-79135697 Msa1041550:intron 20.0%
!!! TTCAAAAACTTTTATACTAC+AGG - chr7_1:79135828-79135847 None:intergenic 20.0%
!!! CAACTTTTTAGGATAAAAAA+CGG + chr7_1:79135941-79135960 Msa1041550:intron 20.0%
!! TTAGTATAAAGTATATCTGA+GGG - chr7_1:79137441-79137460 None:intergenic 20.0%
!! ATTAGTATAAAGTATATCTG+AGG - chr7_1:79137442-79137461 None:intergenic 20.0%
!! GATGAAATAATGATAACTTA+TGG - chr7_1:79137844-79137863 None:intergenic 20.0%
!! GTATTCAAGTACATAATTTA+AGG - chr7_1:79137904-79137923 None:intergenic 20.0%
!! TCCATAAACAAGTAAAATAA+AGG + chr7_1:79137934-79137953 Msa1041550:intron 20.0%
!!! TCCTTTATTTTACTTGTTTA+TGG - chr7_1:79137938-79137957 None:intergenic 20.0%
!! GATAATACATAATATATGCA+AGG + chr7_1:79138009-79138028 Msa1041550:intron 20.0%
!!! CTTTTTGCATTTTTTAAAAC+TGG + chr7_1:79138644-79138663 Msa1041550:intron 20.0%
!!! CTAAATGTTATTTTAGGTAT+TGG - chr7_1:79139119-79139138 None:intergenic 20.0%
!! TACCTAAAATAACATTTAGA+TGG + chr7_1:79139120-79139139 Msa1041550:intron 20.0%
!! ACCTAAAATAACATTTAGAT+GGG + chr7_1:79139121-79139140 Msa1041550:intron 20.0%
!! AGGTTATATAACTATAAACA+AGG + chr7_1:79139207-79139226 Msa1041550:intron 20.0%
!!! ATGTCATTTTACTAAAAAGA+TGG + chr7_1:79139234-79139253 Msa1041550:intron 20.0%
!!! ATTAATTATTTTTTGGTAGG+GGG + chr7_1:79139861-79139880 Msa1041550:intron 20.0%
!! ACATATATCAATTTCTTTGA+CGG - chr7_1:79140331-79140350 None:intergenic 20.0%
!! AAAACTGTTTTGCTTCTTTA+TGG + chr7_1:79129916-79129935 Msa1041550:CDS 25.0%
!! CATAGAATTTTGTTAATACC+GGG - chr7_1:79130424-79130443 None:intergenic 25.0%
! AATTAGGGAGAAAAAGAATA+AGG - chr7_1:79130449-79130468 None:intergenic 25.0%
! AGATCTAATGCACTTAATTA+GGG - chr7_1:79130464-79130483 None:intergenic 25.0%
! AAGATCTAATGCACTTAATT+AGG - chr7_1:79130465-79130484 None:intergenic 25.0%
!! CATTAGATCTTTACTAGTTT+AGG + chr7_1:79130474-79130493 Msa1041550:intron 25.0%
!! TACTAGTTTAGGCTAAATTA+TGG + chr7_1:79130485-79130504 Msa1041550:intron 25.0%
!!! TTTGATAGTTGATTTGAGAT+AGG + chr7_1:79130552-79130571 Msa1041550:intron 25.0%
! CTTAAGGGACTAAAATAAAA+CGG - chr7_1:79130712-79130731 None:intergenic 25.0%
!!! GTCATTTCATTTTGGTAAAT+TGG + chr7_1:79130803-79130822 Msa1041550:intron 25.0%
!!! TTATTTTTGCTAGTTGGTTT+TGG + chr7_1:79130900-79130919 Msa1041550:intron 25.0%
! TACTGTTATTAACACTAAAC+AGG + chr7_1:79131675-79131694 Msa1041550:intron 25.0%
! CAATCCAAACATGTTAATTT+GGG - chr7_1:79131785-79131804 None:intergenic 25.0%
! TCAATCCAAACATGTTAATT+TGG - chr7_1:79131786-79131805 None:intergenic 25.0%
!! AGAAAATAATGGAGTCAAAT+GGG - chr7_1:79132022-79132041 None:intergenic 25.0%
!!! GCTTAAGGTATCATATTTTA+TGG + chr7_1:79132073-79132092 Msa1041550:intron 25.0%
!!! CTTTTTTAAATAGAGAAACC+TGG + chr7_1:79132128-79132147 Msa1041550:intron 25.0%
! TTGTTAAACTTGACTAACAT+TGG - chr7_1:79132198-79132217 None:intergenic 25.0%
!! AAAGTATCCTTATCATGTAT+TGG - chr7_1:79132387-79132406 None:intergenic 25.0%
! AATCACAAGACACTTTAATT+TGG + chr7_1:79132555-79132574 Msa1041550:intron 25.0%
! TGAATTTGACAAAATCATCT+TGG - chr7_1:79132610-79132629 None:intergenic 25.0%
! GTTGAATCATATATCTAAGA+TGG + chr7_1:79132724-79132743 Msa1041550:intron 25.0%
!!! TAGTGTTCATTATTTTGAAC+AGG + chr7_1:79132873-79132892 Msa1041550:intron 25.0%
!!! AGTGTTCATTATTTTGAACA+GGG + chr7_1:79132874-79132893 Msa1041550:intron 25.0%
! TCTTAATTTCTTTCATGTTG+AGG - chr7_1:79133057-79133076 None:intergenic 25.0%
! ATATTCATGTTGTATAGGAA+CGG - chr7_1:79133316-79133335 None:intergenic 25.0%
!!! ACAAATTTTTTCTGCAAAAG+TGG - chr7_1:79133381-79133400 None:intergenic 25.0%
! GACAATACATTGTAATATGT+AGG + chr7_1:79133520-79133539 Msa1041550:intron 25.0%
! TAGTTAAAGTTCACATTTGA+AGG - chr7_1:79133581-79133600 None:intergenic 25.0%
!! ATTTCATTCATGAGGTATTA+AGG - chr7_1:79133683-79133702 None:intergenic 25.0%
!!! CATGTTTTAAAAATGTTCTC+TGG + chr7_1:79133856-79133875 Msa1041550:intron 25.0%
!!! TTTTTCAATATAAAAAGCGC+AGG - chr7_1:79133891-79133910 None:intergenic 25.0%
!! CATTTTCCAATATAAAAAGC+AGG - chr7_1:79133927-79133946 None:intergenic 25.0%
!!! GTTTTGTTAACTAATGTTCA+AGG - chr7_1:79133954-79133973 None:intergenic 25.0%
!!! AAGGATCTTATATTTTGAGA+TGG - chr7_1:79133996-79134015 None:intergenic 25.0%
! TTTGCAGAAGCAAATAAAAA+GGG - chr7_1:79134122-79134141 None:intergenic 25.0%
!! TTTTGCAGAAGCAAATAAAA+AGG - chr7_1:79134123-79134142 None:intergenic 25.0%
! ATGAGATAGACAAACAAAAA+GGG - chr7_1:79134156-79134175 None:intergenic 25.0%
! TATGAGATAGACAAACAAAA+AGG - chr7_1:79134157-79134176 None:intergenic 25.0%
! TTCAAAATGGTCCTATAAAT+AGG + chr7_1:79134262-79134281 Msa1041550:intron 25.0%
! TTGTTTAACATTAAAGCATG+GGG + chr7_1:79134446-79134465 Msa1041550:intron 25.0%
!!! TTTGTTGATTTTCATCACAA+GGG + chr7_1:79134491-79134510 Msa1041550:intron 25.0%
! TTAATGCGTAATGTATAAAG+TGG + chr7_1:79134610-79134629 Msa1041550:intron 25.0%
! CTTTAGTCAAATATGAGAAA+TGG + chr7_1:79134676-79134695 Msa1041550:intron 25.0%
! AGACTCAACATATTATAGAT+TGG + chr7_1:79134809-79134828 Msa1041550:intron 25.0%
! CTCAATCAGTCAAAAAAAAA+AGG + chr7_1:79135002-79135021 Msa1041550:intron 25.0%
!! AGTCAAAAAAAAAAGGTACA+AGG + chr7_1:79135009-79135028 Msa1041550:intron 25.0%
!! AAAAAAAAGGTACAAGGAAA+AGG + chr7_1:79135015-79135034 Msa1041550:intron 25.0%
!! AAAAAAAGGTACAAGGAAAA+GGG + chr7_1:79135016-79135035 Msa1041550:intron 25.0%
!!! TTATATTTTGGTTACCCTTA+AGG - chr7_1:79135046-79135065 None:intergenic 25.0%
! TAGGTACATACAAATTACAA+TGG + chr7_1:79135612-79135631 Msa1041550:intron 25.0%
!! TTTCAATGGTACAACTTTTT+AGG + chr7_1:79135930-79135949 Msa1041550:intron 25.0%
! AATAAGCACTAGTAACAAAA+CGG + chr7_1:79135965-79135984 Msa1041550:exon 25.0%
! AAGCGCAAGTATAAATATAT+AGG - chr7_1:79135999-79136018 None:intergenic 25.0%
! ATATATGGCTATTATAGACA+AGG - chr7_1:79136046-79136065 None:intergenic 25.0%
!!! AAAATTGTTTTGCTTCACTA+TGG + chr7_1:79136227-79136246 Msa1041550:three_prime_UTR 25.0%
!!! TTTTGTTTAGGAATGTATGA+TGG - chr7_1:79136337-79136356 None:intergenic 25.0%
! GATTACAAATACAGATTTGT+AGG - chr7_1:79136937-79136956 None:intergenic 25.0%
! GATGAAATATATCAGACTAT+AGG + chr7_1:79136989-79137008 Msa1041550:intron 25.0%
!!! CAACAAAAAGGTTTTTTACT+CGG - chr7_1:79137018-79137037 None:intergenic 25.0%
!! AGATTTTGTATAGAATTGCA+CGG + chr7_1:79137155-79137174 Msa1041550:intron 25.0%
! TGTGATTGATTATGTAACTT+TGG + chr7_1:79137370-79137389 Msa1041550:intron 25.0%
! ATGCTTAGTAAAATGGTTTA+CGG + chr7_1:79137592-79137611 Msa1041550:three_prime_UTR 25.0%
! TACTTGACCTTCATATAAAA+GGG - chr7_1:79137658-79137677 None:intergenic 25.0%
!! TTTTATATGAAGGTCAAGTA+CGG + chr7_1:79137658-79137677 Msa1041550:three_prime_UTR 25.0%
! AATTAAGTCTCAAGAGTTAA+AGG + chr7_1:79137717-79137736 Msa1041550:three_prime_UTR 25.0%
!! AACCATATTAGGCAAATTTT+AGG - chr7_1:79137805-79137824 None:intergenic 25.0%
! TGTACTTGAATACATCAATT+TGG + chr7_1:79137911-79137930 Msa1041550:intron 25.0%
! CAATAGTTTAAAGACCAAAT+TGG + chr7_1:79137976-79137995 Msa1041550:intron 25.0%
! TTTAAAGACCAAATTGGTAT+TGG + chr7_1:79137982-79138001 Msa1041550:intron 25.0%
!! CAATTTGATCTTTCTTTTTG+TGG - chr7_1:79138057-79138076 None:intergenic 25.0%
!! TGTTAGTTTCAAGACTAAAT+TGG + chr7_1:79138086-79138105 Msa1041550:intron 25.0%
! ACCTCTTAAAAGAAATTAAG+AGG + chr7_1:79138123-79138142 Msa1041550:intron 25.0%
!! ACCTCTTAATTTCTTTTAAG+AGG - chr7_1:79138127-79138146 None:intergenic 25.0%
!!! TTTTAAGAGTGTTAGTTTCA+GGG - chr7_1:79139026-79139045 None:intergenic 25.0%
! CACTCTTAAAAGAAATTAAG+TGG + chr7_1:79139035-79139054 Msa1041550:intron 25.0%
! CCTAAAATAACATTTAGATG+GGG + chr7_1:79139122-79139141 Msa1041550:intron 25.0%
!!! ATTGTGTTGTATGTTACTTT+AGG + chr7_1:79139453-79139472 Msa1041550:intron 25.0%
!! AAGAATGTCCTTTTCAAAAA+TGG + chr7_1:79139508-79139527 Msa1041550:three_prime_UTR 25.0%
! AACATACGTCAAAGTATATA+TGG - chr7_1:79139822-79139841 None:intergenic 25.0%
! ATATATACTTTGACGTATGT+TGG + chr7_1:79139821-79139840 Msa1041550:intron 25.0%
! TAAAATAAAGATCAAAGGAG+AGG + chr7_1:79140155-79140174 Msa1041550:three_prime_UTR 25.0%
! AAGTATAAGCTTCAAACATA+TGG + chr7_1:79140193-79140212 Msa1041550:three_prime_UTR 25.0%
! AGTATAAGCTTCAAACATAT+GGG + chr7_1:79140194-79140213 Msa1041550:three_prime_UTR 25.0%
!! GTTCTAATTCTTTTCATACA+CGG - chr7_1:79140249-79140268 None:intergenic 25.0%
!! ATGTTGATGATGATGAGAAA+TGG + chr7_1:79130126-79130145 Msa1041550:CDS 30.0%
CATTCAACTAGGTACAAAAA+TGG + chr7_1:79130287-79130306 Msa1041550:intron 30.0%
AACTAGGTACAAAAATGGAA+AGG + chr7_1:79130292-79130311 Msa1041550:intron 30.0%
! TATGGAGATTGCTTTAGATT+TGG + chr7_1:79130361-79130380 Msa1041550:CDS 30.0%
!!! CGTTTTATTTTAGTCCCTTA+AGG + chr7_1:79130710-79130729 Msa1041550:intron 30.0%
!!! TTCCTAGTGTCATTTCATTT+TGG + chr7_1:79130795-79130814 Msa1041550:intron 30.0%
TACCAAAATGAAATGACACT+AGG - chr7_1:79130800-79130819 None:intergenic 30.0%
ATCTTAGTATGTGTTTGCTT+TGG + chr7_1:79131062-79131081 Msa1041550:intron 30.0%
!! CATTTTAAGCATGTGTTGTT+TGG - chr7_1:79131210-79131229 None:intergenic 30.0%
ATGTATACTTAATCCTCCAA+AGG + chr7_1:79131227-79131246 Msa1041550:intron 30.0%
!! TTTGCAAGTTGAATTTTGGA+GGG - chr7_1:79131257-79131276 None:intergenic 30.0%
!! ATTTGCAAGTTGAATTTTGG+AGG - chr7_1:79131258-79131277 None:intergenic 30.0%
!! GTGATTTGCAAGTTGAATTT+TGG - chr7_1:79131261-79131280 None:intergenic 30.0%
!! ATTTTGGTCGTAAGTTACAA+AGG - chr7_1:79131329-79131348 None:intergenic 30.0%
ATGTATTGTTATGCACATGT+AGG + chr7_1:79131377-79131396 Msa1041550:intron 30.0%
! TGTAGGTTCATTTTCTTTCT+AGG + chr7_1:79131394-79131413 Msa1041550:intron 30.0%
! GTAGGTTCATTTTCTTTCTA+GGG + chr7_1:79131395-79131414 Msa1041550:intron 30.0%
TCTAGGGATATGATGTATTA+TGG + chr7_1:79131411-79131430 Msa1041550:CDS 30.0%
CTAGGGATATGATGTATTAT+GGG + chr7_1:79131412-79131431 Msa1041550:CDS 30.0%
TAGGGATATGATGTATTATG+GGG + chr7_1:79131413-79131432 Msa1041550:CDS 30.0%
AAGTTTCCTATAATTGACGT+GGG + chr7_1:79131576-79131595 Msa1041550:CDS 30.0%
ACTGTCAAGAAAATCAAATC+TGG + chr7_1:79131600-79131619 Msa1041550:CDS 30.0%
AATCAAATCTGGAGAAATAC+AGG + chr7_1:79131611-79131630 Msa1041550:CDS 30.0%
TTTGCCCAAATTAACATGTT+TGG + chr7_1:79131778-79131797 Msa1041550:intron 30.0%
GTCAAGTTTCCATATATGTA+TGG - chr7_1:79131866-79131885 None:intergenic 30.0%
! CAGAAAATAATGGAGTCAAA+TGG - chr7_1:79132023-79132042 None:intergenic 30.0%
TCAAGAGATCAACTCATAAA+TGG + chr7_1:79132051-79132070 Msa1041550:CDS 30.0%
ATCAACTCATAAATGGCTTA+AGG + chr7_1:79132058-79132077 Msa1041550:CDS 30.0%
!! TATGGAGTACTACTTCTTTT+TGG + chr7_1:79132091-79132110 Msa1041550:intron 30.0%
ATTGGTATAACAGACTTAAC+AGG - chr7_1:79132180-79132199 None:intergenic 30.0%
TGAATTGAAAGTGATGTAAG+TGG - chr7_1:79132326-79132345 None:intergenic 30.0%
GAATAGACCAATACATGATA+AGG + chr7_1:79132377-79132396 Msa1041550:intron 30.0%
!!! TCAGTTATTTTGAGACAGAA+CGG + chr7_1:79132479-79132498 Msa1041550:intron 30.0%
TAGCTATACTGATAGAATCA+TGG + chr7_1:79132520-79132539 Msa1041550:intron 30.0%
TTAGGATGGACCATAAATTA+AGG + chr7_1:79133149-79133168 Msa1041550:intron 30.0%
TGAATTTCAATCGGTATACA+AGG - chr7_1:79133236-79133255 None:intergenic 30.0%
!! ACTTTTGGGTGAATTTCAAT+CGG - chr7_1:79133245-79133264 None:intergenic 30.0%
!!! GATTCAACTTTTTTCAAGGA+AGG - chr7_1:79133439-79133458 None:intergenic 30.0%
!!! GTTGGATTCAACTTTTTTCA+AGG - chr7_1:79133443-79133462 None:intergenic 30.0%
! TCCAACCTTAATTGTTGTTA+TGG + chr7_1:79133457-79133476 Msa1041550:intron 30.0%
TCCATAACAACAATTAAGGT+TGG - chr7_1:79133461-79133480 None:intergenic 30.0%
CACATTTGAAGGTGAATAAA+TGG - chr7_1:79133570-79133589 None:intergenic 30.0%
!!! CATTCTCCTGCTTTTTATAT+TGG + chr7_1:79133918-79133937 Msa1041550:intron 30.0%
TTGCAGAAGCAAATAAAAAG+GGG - chr7_1:79134121-79134140 None:intergenic 30.0%
TGAGATAGACAAACAAAAAG+GGG - chr7_1:79134155-79134174 None:intergenic 30.0%
TTCCTTTCGTTCCTATTTAT+AGG - chr7_1:79134276-79134295 None:intergenic 30.0%
!!! CTTTGTTGATTTTCATCACA+AGG + chr7_1:79134490-79134509 Msa1041550:intron 30.0%
! AAGAAACACATTAGTCTCAA+TGG + chr7_1:79134535-79134554 Msa1041550:intron 30.0%
TTATATCCTCTCAGTTTCTA+CGG + chr7_1:79134577-79134596 Msa1041550:intron 30.0%
TCAGTTTCTACGGTTATAAT+AGG + chr7_1:79134587-79134606 Msa1041550:intron 30.0%
! TGTCATTTCCTAAACTTCAA+AGG + chr7_1:79134718-79134737 Msa1041550:intron 30.0%
!! TGAAACATCCTTTGAAGTTT+AGG - chr7_1:79134729-79134748 None:intergenic 30.0%
TAAGTCAGACCAATTTATAG+AGG - chr7_1:79135118-79135137 None:intergenic 30.0%
TACAAACTTACAATTTCCTC+CGG + chr7_1:79135239-79135258 Msa1041550:intron 30.0%
TTGCTTCATCTCATCTTATT+TGG + chr7_1:79135266-79135285 Msa1041550:intron 30.0%
AGATGAAATGTTCATTGTGT+TGG + chr7_1:79135486-79135505 Msa1041550:intron 30.0%
AATAACAAGAGGAATGTTAG+AGG + chr7_1:79135538-79135557 Msa1041550:intron 30.0%
ATAACAAGAGGAATGTTAGA+GGG + chr7_1:79135539-79135558 Msa1041550:intron 30.0%
! TGTAATTTGTATGTACCTAC+AGG - chr7_1:79135611-79135630 None:intergenic 30.0%
AATGAAAGAGTGATAGTTGT+TGG + chr7_1:79136130-79136149 Msa1041550:three_prime_UTR 30.0%
! CAAAACAATTTTCTCTTTCG+AGG - chr7_1:79136219-79136238 None:intergenic 30.0%
! CTTCAATTTCAGGTACAAAA+GGG - chr7_1:79136549-79136568 None:intergenic 30.0%
! CTTTTGTACCTGAAATTGAA+GGG + chr7_1:79136548-79136567 Msa1041550:three_prime_UTR 30.0%
ATTCAACTGGGTTTAAGAAT+GGG + chr7_1:79136599-79136618 Msa1041550:three_prime_UTR 30.0%
!! ATGAACATGTTCTTGTTGTT+GGG + chr7_1:79136635-79136654 Msa1041550:three_prime_UTR 30.0%
TTTGATGTGTGCATCTTAAA+AGG - chr7_1:79136841-79136860 None:intergenic 30.0%
AAAATTATAGACAGAGCACA+TGG - chr7_1:79136888-79136907 None:intergenic 30.0%
!!! CCTTTTTGTTGATGATGAAA+CGG + chr7_1:79137027-79137046 Msa1041550:intron 30.0%
!!! CTTTTTGTTGATGATGAAAC+GGG + chr7_1:79137028-79137047 Msa1041550:intron 30.0%
TAGAATTGCACGGATATATA+TGG + chr7_1:79137165-79137184 Msa1041550:intron 30.0%
AGAATTGCACGGATATATAT+GGG + chr7_1:79137166-79137185 Msa1041550:intron 30.0%
! TCTGATGAAGTATTTGTCAA+TGG + chr7_1:79137546-79137565 Msa1041550:three_prime_UTR 30.0%
GTACTTGACCTTCATATAAA+AGG - chr7_1:79137659-79137678 None:intergenic 30.0%
AAGTATCCTATTATTGACGT+TGG + chr7_1:79137682-79137701 Msa1041550:three_prime_UTR 30.0%
! TTGAGACTTAATTTTGCGAA+AGG - chr7_1:79137710-79137729 None:intergenic 30.0%
! AAAGGTACGTTAGCAATAAT+TGG + chr7_1:79137735-79137754 Msa1041550:intron 30.0%
CACCTAAAATTTGCCTAATA+TGG + chr7_1:79137800-79137819 Msa1041550:intron 30.0%
! ATTGACTTCGAAACCATATT+AGG - chr7_1:79137816-79137835 None:intergenic 30.0%
TATCCATACCAATACCAATT+TGG - chr7_1:79137993-79138012 None:intergenic 30.0%
TACATAATATATGCAAGGTC+CGG + chr7_1:79138014-79138033 Msa1041550:intron 30.0%
! TTTGATCTTTCTTTTTGTGG+TGG - chr7_1:79138054-79138073 None:intergenic 30.0%
TGTTTGCATATTCTACTAAG+AGG - chr7_1:79138187-79138206 None:intergenic 30.0%
TGTTTGCATATTCTACTAAG+AGG - chr7_1:79138187-79138206 None:intergenic 30.0%
ATATTGAAATCCACAAGAAG+TGG + chr7_1:79138250-79138269 Msa1041550:intron 30.0%
!! AAGAAGTGGATAAGTTGATT+TGG + chr7_1:79138264-79138283 Msa1041550:intron 30.0%
TTGTACATTAAATCTTGAGG+AGG - chr7_1:79138290-79138309 Msa1041560:CDS 30.0%
AGCTTGTACATTAAATCTTG+AGG - chr7_1:79138293-79138312 Msa1041560:CDS 30.0%
TGAGACTATAAGGTGTATTT+GGG + chr7_1:79138350-79138369 Msa1041550:intron 30.0%
ATATGCTGGAGAAGAATTTA+AGG - chr7_1:79138691-79138710 Msa1041560:CDS 30.0%
AAGTTGACTAAAACAACTCT+TGG - chr7_1:79138848-79138867 Msa1041560:intron 30.0%
!! TTTAAGAGTGTTAGTTTCAG+GGG - chr7_1:79139025-79139044 None:intergenic 30.0%
!!! CTTTTAAGAGTGTTAGTTTC+AGG - chr7_1:79139027-79139046 None:intergenic 30.0%
!! GGTATTGGTTATGTAACTAT+TGG - chr7_1:79139104-79139123 None:intergenic 30.0%
!!! CCCCATCTAAATGTTATTTT+AGG - chr7_1:79139125-79139144 None:intergenic 30.0%
!!! TATGTTACTTTAGGTTTTGC+CGG + chr7_1:79139462-79139481 Msa1041550:intron 30.0%
!! CTTATGCATTCTATTTCTAC+CGG - chr7_1:79139484-79139503 None:intergenic 30.0%
GTAGAAATAGAATGCATAAG+TGG + chr7_1:79139484-79139503 Msa1041550:three_prime_UTR 30.0%
!! GCAATTGACCATTTTTGAAA+AGG - chr7_1:79139519-79139538 None:intergenic 30.0%
TGTAGAAACCAAAAGAAATG+TGG + chr7_1:79139796-79139815 Msa1041550:intron 30.0%
! ATATATGGCCACATTTCTTT+TGG - chr7_1:79139807-79139826 None:intergenic 30.0%
! GATTACCTTTTGAATGATGA+TGG + chr7_1:79139886-79139905 Msa1041550:three_prime_UTR 30.0%
GAATACCATCATCATTCAAA+AGG - chr7_1:79139894-79139913 None:intergenic 30.0%
! AAGAATGGTTTGTATTGTGT+TGG + chr7_1:79139946-79139965 Msa1041550:three_prime_UTR 30.0%
GTATAAGCTTCAAACATATG+GGG + chr7_1:79140195-79140214 Msa1041550:three_prime_UTR 30.0%
TTCGAGAATGATGAAAGGTA+TGG - chr7_1:79129892-79129911 None:intergenic 35.0%
TCTCTTTCGAGAATGATGAA+AGG - chr7_1:79129897-79129916 None:intergenic 35.0%
!!! TGTTTTTTGGGTACATAGTG+AGG - chr7_1:79130026-79130045 None:intergenic 35.0%
CAACAGCTCTGTTGTATATA+GGG - chr7_1:79130094-79130113 None:intergenic 35.0%
TCAACAGCTCTGTTGTATAT+AGG - chr7_1:79130095-79130114 None:intergenic 35.0%
!! TTGATGATGATGAGAAATGG+AGG + chr7_1:79130129-79130148 Msa1041550:CDS 35.0%
! TGATGATGATGAGAAATGGA+GGG + chr7_1:79130130-79130149 Msa1041550:CDS 35.0%
AAAGCTGAGAATAAGAGTTC+TGG + chr7_1:79130155-79130174 Msa1041550:CDS 35.0%
! GCTTTAGATTTGGCTAACTT+TGG + chr7_1:79130371-79130390 Msa1041550:CDS 35.0%
TTCAATCATTGTTAGAAGCC+CGG + chr7_1:79130403-79130422 Msa1041550:CDS 35.0%
AATCTGCATGTTGCAAATCA+CGG - chr7_1:79130512-79130531 None:intergenic 35.0%
! AAACATCTGACTTGACAAGA+AGG + chr7_1:79130831-79130850 Msa1041550:intron 35.0%
!!! TTTTGCTAGTTGGTTTTGGA+AGG + chr7_1:79130904-79130923 Msa1041550:intron 35.0%
!!! TTGGTTTTGGAAGGTTTTAG+AGG + chr7_1:79130913-79130932 Msa1041550:intron 35.0%
GTAAAAACAGTTCCAAAGTG+CGG + chr7_1:79131170-79131189 Msa1041550:intron 35.0%
!! AATTTTGGAGGGAAAACCTT+TGG - chr7_1:79131246-79131265 None:intergenic 35.0%
GTTACAAAGGATAGACATGT+TGG - chr7_1:79131316-79131335 None:intergenic 35.0%
AGGGATATGATGTATTATGG+GGG + chr7_1:79131414-79131433 Msa1041550:CDS 35.0%
TATGGAGATCTGAGCAAATA+TGG + chr7_1:79131504-79131523 Msa1041550:CDS 35.0%
TACTTCATCTTCATGGTGAA+CGG - chr7_1:79131552-79131571 None:intergenic 35.0%
TTCACCATGAAGATGAAGTA+TGG + chr7_1:79131552-79131571 Msa1041550:CDS 35.0%
CAAGTTTCCTATAATTGACG+TGG + chr7_1:79131575-79131594 Msa1041550:CDS 35.0%
TCCAAGAGAGATCAGTATTT+AGG - chr7_1:79131706-79131725 None:intergenic 35.0%
GCACTTGTGAATACATTAAG+AGG + chr7_1:79131827-79131846 Msa1041550:intron 35.0%
TAAAGACATAGATTGACGAG+TGG + chr7_1:79131905-79131924 Msa1041550:intron 35.0%
! AATAATGGAGTCAAATGGGT+AGG - chr7_1:79132018-79132037 None:intergenic 35.0%
GAAACCAGTGCAGAAAATAA+TGG - chr7_1:79132033-79132052 None:intergenic 35.0%
!! TCACCTATTTTGAGAGAGAA+CGG - chr7_1:79132252-79132271 None:intergenic 35.0%
ATGACACTGCATTCAATCAA+GGG - chr7_1:79132835-79132854 None:intergenic 35.0%
!!! GTTCATTATTTTGAACAGGG+TGG + chr7_1:79132877-79132896 Msa1041550:intron 35.0%
AGCAAATGATATTGCTATGC+TGG + chr7_1:79133029-79133048 Msa1041550:CDS 35.0%
CATGTCATATGTTCTGTGAT+TGG + chr7_1:79133088-79133107 Msa1041550:intron 35.0%
CATTGTAATATGTAGGGATC+AGG + chr7_1:79133527-79133546 Msa1041550:intron 35.0%
! ATATAAAAAGCGCAGGAGAA+GGG - chr7_1:79133884-79133903 None:intergenic 35.0%
! AATATAAAAAGCGCAGGAGA+AGG - chr7_1:79133885-79133904 None:intergenic 35.0%
TGCAGAAGCAAATAAAAAGG+GGG - chr7_1:79134120-79134139 None:intergenic 35.0%
GTCCTATAAATAGGAACGAA+AGG + chr7_1:79134271-79134290 Msa1041550:intron 35.0%
TTATAACCGTAGAAACTGAG+AGG - chr7_1:79134586-79134605 None:intergenic 35.0%
! ACACTTGCTCTGAATGTAAA+AGG + chr7_1:79134973-79134992 Msa1041550:intron 35.0%
! AGTTTGGTTTCATGGAACTA+GGG - chr7_1:79135148-79135167 None:intergenic 35.0%
! TACGTATGAGTTTGGTTTCA+TGG - chr7_1:79135156-79135175 None:intergenic 35.0%
TACGTATGTACGTATGAGTT+TGG - chr7_1:79135164-79135183 None:intergenic 35.0%
GGATTGTATAAGGAATGGAT+TGG - chr7_1:79136198-79136217 None:intergenic 35.0%
TTCGAGGATTGTATAAGGAA+TGG - chr7_1:79136203-79136222 None:intergenic 35.0%
TCTCTTTCGAGGATTGTATA+AGG - chr7_1:79136208-79136227 None:intergenic 35.0%
!!! GCTCGCAAAATTGTTTTTTG+AGG - chr7_1:79136285-79136304 None:intergenic 35.0%
! TGTATGATGGAAAAGAAGGT+GGG - chr7_1:79136324-79136343 None:intergenic 35.0%
! ATGTATGATGGAAAAGAAGG+TGG - chr7_1:79136325-79136344 None:intergenic 35.0%
! GGAATGTATGATGGAAAAGA+AGG - chr7_1:79136328-79136347 None:intergenic 35.0%
!! ATGATGAAGGTTCTGAGAAA+TGG + chr7_1:79136437-79136456 Msa1041550:three_prime_UTR 35.0%
AAGGCTATGAATAAGGATTC+CGG + chr7_1:79136466-79136485 Msa1041550:three_prime_UTR 35.0%
! GGAATATGAAGGAAGGTTTT+TGG + chr7_1:79136498-79136517 Msa1041550:three_prime_UTR 35.0%
! CCTTCAATTTCAGGTACAAA+AGG - chr7_1:79136550-79136569 None:intergenic 35.0%
! CCTTTTGTACCTGAAATTGA+AGG + chr7_1:79136547-79136566 Msa1041550:three_prime_UTR 35.0%
AGTTGAATGAATCACTTTCC+CGG - chr7_1:79136587-79136606 None:intergenic 35.0%
GGAAAGTGATTCATTCAACT+GGG + chr7_1:79136587-79136606 Msa1041550:three_prime_UTR 35.0%
CATTCAACTGGGTTTAAGAA+TGG + chr7_1:79136598-79136617 Msa1041550:three_prime_UTR 35.0%
! GATGAACATGTTCTTGTTGT+TGG + chr7_1:79136634-79136653 Msa1041550:three_prime_UTR 35.0%
!! TTCTGGAATGGAAATTGCAT+TGG + chr7_1:79136666-79136685 Msa1041550:three_prime_UTR 35.0%
CCGTTTCATCATCAACAAAA+AGG - chr7_1:79137030-79137049 None:intergenic 35.0%
! GTTAGCTGTTGATTATACGT+AGG + chr7_1:79137327-79137346 Msa1041550:intron 35.0%
ACGAATACAATGTAATGTGC+AGG + chr7_1:79137483-79137502 Msa1041550:intron 35.0%
! GAAGTATTTGTCAATGGAGA+TGG + chr7_1:79137552-79137571 Msa1041550:three_prime_UTR 35.0%
! GATGGTGATGCTTAGTAAAA+TGG + chr7_1:79137585-79137604 Msa1041550:three_prime_UTR 35.0%
TACGGAGATGTCACAAATTA+TGG + chr7_1:79137610-79137629 Msa1041550:three_prime_UTR 35.0%
GATGTCACAAATTATGGAGT+TGG + chr7_1:79137616-79137635 Msa1041550:three_prime_UTR 35.0%
! TCACAAATTATGGAGTTGGT+AGG + chr7_1:79137620-79137639 Msa1041550:three_prime_UTR 35.0%
AAGGTTCCAACGTCAATAAT+AGG - chr7_1:79137691-79137710 None:intergenic 35.0%
ACGTTAGCAATAATTGGCAT+TGG + chr7_1:79137741-79137760 Msa1041550:intron 35.0%
!! ATAATTGGCATTGGTTGCTT+TGG + chr7_1:79137750-79137769 Msa1041550:intron 35.0%
!! AGACCAAATTGGTATTGGTA+TGG + chr7_1:79137987-79138006 Msa1041550:intron 35.0%
ACATAATATATGCAAGGTCC+GGG + chr7_1:79138015-79138034 Msa1041550:intron 35.0%
ATCAACTTATCCACTTCTTG+TGG - chr7_1:79138263-79138282 Msa1041560:CDS 35.0%
GTGAGACTATAAGGTGTATT+TGG + chr7_1:79138349-79138368 Msa1041550:intron 35.0%
TAATGCATACATCTTCAGCT+AGG + chr7_1:79138496-79138515 Msa1041550:intron 35.0%
! ATTGCACTTTTGGTGGAATT+TGG - chr7_1:79138578-79138597 Msa1041560:CDS 35.0%
! TATCAGAATTGCACTTTTGG+TGG - chr7_1:79138585-79138604 Msa1041560:CDS 35.0%
! CCTTATCAGAATTGCACTTT+TGG - chr7_1:79138588-79138607 Msa1041560:CDS 35.0%
! CCAAAAGTGCAATTCTGATA+AGG + chr7_1:79138585-79138604 Msa1041550:intron 35.0%
ATGCAAAAAGATAGTTCGTC+AGG - chr7_1:79138634-79138653 Msa1041560:CDS 35.0%
!!! TGCATTTTAGCTGGATTTGA+TGG - chr7_1:79138964-79138983 Msa1041560:CDS 35.0%
TCAAATCCAGCTAAAATGCA+AGG + chr7_1:79138964-79138983 Msa1041550:intron 35.0%
CAAATCCAGCTAAAATGCAA+GGG + chr7_1:79138965-79138984 Msa1041550:intron 35.0%
TCTGAATCATTCTTCAAGTG+AGG - chr7_1:79139297-79139316 None:intergenic 35.0%
! GACTCTATTATTTTCTGCAC+CGG + chr7_1:79139547-79139566 Msa1041550:three_prime_UTR 35.0%
AACATCAACAACAGCAACAA+CGG + chr7_1:79139699-79139718 Msa1041550:intron 35.0%
TTCTTTCCCTTCCAATGAAT+GGG - chr7_1:79139931-79139950 None:intergenic 35.0%
ATTCTTTCCCTTCCAATGAA+TGG - chr7_1:79139932-79139951 None:intergenic 35.0%
ATTCATTGGAAGGGAAAGAA+TGG + chr7_1:79139931-79139950 Msa1041550:three_prime_UTR 35.0%
TGTATTGTGTTGGACTATCA+AGG + chr7_1:79139956-79139975 Msa1041550:three_prime_UTR 35.0%
!! GAAGCACCGGTGATAATAAT+CGG + chr7_1:79129819-79129838 Msa1041550:CDS 40.0%
ATGAAGATGAACACGATCGT+AGG - chr7_1:79129952-79129971 None:intergenic 40.0%
TGAGGATAAGAAGGTGGAAA+AGG - chr7_1:79130008-79130027 None:intergenic 40.0%
ACATAGTGAGGATAAGAAGG+TGG - chr7_1:79130014-79130033 None:intergenic 40.0%
GGTACATAGTGAGGATAAGA+AGG - chr7_1:79130017-79130036 None:intergenic 40.0%
! TAAGAGTTCTGGTGAAGTTG+AGG + chr7_1:79130166-79130185 Msa1041550:CDS 40.0%
! GGAGTATTCTGGAAGATTCT+TGG + chr7_1:79130187-79130206 Msa1041550:CDS 40.0%
AGATTCTTGGTTGTTGCTAG+TGG + chr7_1:79130200-79130219 Msa1041550:CDS 40.0%
AAGGGTTGGAGAGTTTCAAA+GGG + chr7_1:79130255-79130274 Msa1041550:intron 40.0%
GGAAAGTGATGCATTCAACT+AGG + chr7_1:79130276-79130295 Msa1041550:intron 40.0%
! GATGAGCATGTTCTTGTTGT+TGG + chr7_1:79130323-79130342 Msa1041550:CDS 40.0%
!! CATGTTCTTGTTGTTGGTTC+TGG + chr7_1:79130329-79130348 Msa1041550:CDS 40.0%
!! GTTGTTGGTTCTGGTAATTC+TGG + chr7_1:79130338-79130357 Msa1041550:CDS 40.0%
!! TGGTTCTGGTAATTCTGGTA+TGG + chr7_1:79130343-79130362 Msa1041550:CDS 40.0%
GGGCTTCTAACAATGATTGA+AGG - chr7_1:79130404-79130423 None:intergenic 40.0%
GTGTGACGATTGTACCTTAA+GGG - chr7_1:79130727-79130746 None:intergenic 40.0%
TGTGTGACGATTGTACCTTA+AGG - chr7_1:79130728-79130747 None:intergenic 40.0%
!! ACAGCACTTTAGCTCTTTGT+CGG - chr7_1:79130870-79130889 None:intergenic 40.0%
TATGTGTTTGCTTTGGCAGT+GGG + chr7_1:79131069-79131088 Msa1041550:intron 40.0%
! CAGCTTTAATATCCGCACTT+TGG - chr7_1:79131185-79131204 None:intergenic 40.0%
TAACTATCTGTCACCAAGCA+CGG + chr7_1:79131446-79131465 Msa1041550:CDS 40.0%
ATAGCAAGCAGGATTGTGTA+TGG + chr7_1:79131486-79131505 Msa1041550:CDS 40.0%
! GGTATACCTTTTCCTAGTGA+AGG + chr7_1:79131525-79131544 Msa1041550:CDS 40.0%
ACTTCATCTTCATGGTGAAC+GGG - chr7_1:79131551-79131570 None:intergenic 40.0%
CTTGCCATACTTCATCTTCA+TGG - chr7_1:79131559-79131578 None:intergenic 40.0%
ACAGTTCCCACGTCAATTAT+AGG - chr7_1:79131585-79131604 None:intergenic 40.0%
GCCTAAATACTGATCTCTCT+TGG + chr7_1:79131702-79131721 Msa1041550:intron 40.0%
AAGCACATGACATGCATAGA+TGG + chr7_1:79131728-79131747 Msa1041550:intron 40.0%
CATTAAGAGGTTGAGTGATG+CGG + chr7_1:79131840-79131859 Msa1041550:intron 40.0%
!! CTTATGCTCTCTATTTCTGC+TGG - chr7_1:79131963-79131982 None:intergenic 40.0%
! GCAGAAATAGAGAGCATAAG+TGG + chr7_1:79131963-79131982 Msa1041550:CDS 40.0%
! ATGGGTAGGATTTTCCATCA+CGG - chr7_1:79132004-79132023 None:intergenic 40.0%
! GACTCCATTATTTTCTGCAC+TGG + chr7_1:79132026-79132045 Msa1041550:CDS 40.0%
!! CTATTTTGAGAGAGAACGGA+AGG - chr7_1:79132248-79132267 None:intergenic 40.0%
CTTCCGTTCTCTCTCAAAAT+AGG + chr7_1:79132246-79132265 Msa1041550:intron 40.0%
CATGACACTGCATTCAATCA+AGG - chr7_1:79132836-79132855 None:intergenic 40.0%
! GGTGATCTTTTGAATGAGGA+TGG + chr7_1:79132898-79132917 Msa1041550:CDS 40.0%
TTCCAATGGTATGGTAAACC+AGG - chr7_1:79132934-79132953 None:intergenic 40.0%
TGGTTTACCATACCATTGGA+AGG + chr7_1:79132933-79132952 Msa1041550:CDS 40.0%
GGTTTACCATACCATTGGAA+GGG + chr7_1:79132934-79132953 Msa1041550:CDS 40.0%
TTCTTACCCTTCCAATGGTA+TGG - chr7_1:79132943-79132962 None:intergenic 40.0%
TACCATTGGAAGGGTAAGAA+CGG + chr7_1:79132943-79132962 Msa1041550:CDS 40.0%
! AAGAACGGTTTTTACTGCGT+TGG + chr7_1:79132958-79132977 Msa1041550:CDS 40.0%
! AGAACGGTTTTTACTGCGTT+GGG + chr7_1:79132959-79132978 Msa1041550:CDS 40.0%
! TTGTCAAGGAGGGGATTTTA+TGG + chr7_1:79132982-79133001 Msa1041550:CDS 40.0%
CATCCTAAATCGCACACAAT+CGG - chr7_1:79133137-79133156 None:intergenic 40.0%
! TTGATGCTGCTTGCATGTTA+AGG - chr7_1:79134896-79134915 None:intergenic 40.0%
AAGGAAAAGGGCTAACCTTA+AGG + chr7_1:79135028-79135047 Msa1041550:intron 40.0%
AGGAAAAGGGCTAACCTTAA+GGG + chr7_1:79135029-79135048 Msa1041550:intron 40.0%
! GTTTGGTTTCATGGAACTAG+GGG - chr7_1:79135147-79135166 None:intergenic 40.0%
! GAGTTTGGTTTCATGGAACT+AGG - chr7_1:79135149-79135168 None:intergenic 40.0%
GATGAGATGAAGCAAACAAC+CGG - chr7_1:79135261-79135280 None:intergenic 40.0%
GAGAATGCAGAGTATGATGA+AGG + chr7_1:79136424-79136443 Msa1041550:three_prime_UTR 40.0%
!! TGAAGGTTCTGAGAAATGGA+AGG + chr7_1:79136441-79136460 Msa1041550:three_prime_UTR 40.0%
! TTCTGAGAAATGGAAGGTGA+AGG + chr7_1:79136447-79136466 Msa1041550:three_prime_UTR 40.0%
GAAGGTGAAGGCTATGAATA+AGG + chr7_1:79136459-79136478 Msa1041550:three_prime_UTR 40.0%
TATGAATAAGGATTCCGGTG+AGG + chr7_1:79136471-79136490 Msa1041550:three_prime_UTR 40.0%
TTCATATTCCTCAACCTCAC+CGG - chr7_1:79136488-79136507 None:intergenic 40.0%
AGGTTGAGGAATATGAAGGA+AGG + chr7_1:79136491-79136510 Msa1041550:three_prime_UTR 40.0%
!!! TGAAGGAAGGTTTTTGGTTG+TGG + chr7_1:79136504-79136523 Msa1041550:three_prime_UTR 40.0%
CTCTTCAACCCTTCAATTTC+AGG - chr7_1:79136559-79136578 None:intergenic 40.0%
! GAAGGGTTGAAGAGTTTTAC+CGG + chr7_1:79136565-79136584 Msa1041550:three_prime_UTR 40.0%
! AAGGGTTGAAGAGTTTTACC+GGG + chr7_1:79136566-79136585 Msa1041550:three_prime_UTR 40.0%
GGGAAAGTGATTCATTCAAC+TGG + chr7_1:79136586-79136605 Msa1041550:three_prime_UTR 40.0%
GCATTGGATCTTATCAACCA+TGG + chr7_1:79136682-79136701 Msa1041550:three_prime_UTR 40.0%
!! CGATTGAAGTTTTAGCACCA+TGG - chr7_1:79136702-79136721 None:intergenic 40.0%
TTCAATCGTTGTTCGAAGCA+AGG + chr7_1:79136714-79136733 Msa1041550:three_prime_UTR 40.0%
TCTTCCGTGAAGGGAATATT+GGG - chr7_1:79137130-79137149 None:intergenic 40.0%
ATCTTCCGTGAAGGGAATAT+TGG - chr7_1:79137131-79137150 None:intergenic 40.0%
AATATTCCCTTCACGGAAGA+TGG + chr7_1:79137130-79137149 Msa1041550:intron 40.0%
ATCTTACCATCTTCCGTGAA+GGG - chr7_1:79137139-79137158 None:intergenic 40.0%
AATCTTACCATCTTCCGTGA+AGG - chr7_1:79137140-79137159 None:intergenic 40.0%
! TAAATGACGGGATGAATGAG+TGG + chr7_1:79137265-79137284 Msa1041550:intron 40.0%
AAAGTATATCTGAGGGTGAC+AGG - chr7_1:79137434-79137453 None:intergenic 40.0%
! TGCAGGTTCACATTTTGTCA+AGG + chr7_1:79137500-79137519 Msa1041550:intron 40.0%
! GCAGGTTCACATTTTGTCAA+GGG + chr7_1:79137501-79137520 Msa1041550:intron 40.0%
! CAGGTTCACATTTTGTCAAG+GGG + chr7_1:79137502-79137521 Msa1041550:intron 40.0%
GTATTTGTCAATGGAGATGG+TGG + chr7_1:79137555-79137574 Msa1041550:three_prime_UTR 40.0%
CATAATATATGCAAGGTCCG+GGG + chr7_1:79138016-79138035 Msa1041550:intron 40.0%
! ATCTTTCTTTTTGTGGTGGC+CGG - chr7_1:79138050-79138069 None:intergenic 40.0%
! ACTTTTGGTGGAATTTGGAG+TGG - chr7_1:79138573-79138592 Msa1041560:CDS 40.0%
GTGCAATTCTGATAAGGACA+TGG + chr7_1:79138591-79138610 Msa1041550:intron 40.0%
AAAGGGACATACACATATGC+TGG - chr7_1:79138705-79138724 Msa1041560:intron 40.0%
! TCAAGTGAGGTACTTTGCAA+GGG - chr7_1:79139284-79139303 None:intergenic 40.0%
! TTCAAGTGAGGTACTTTGCA+AGG - chr7_1:79139285-79139304 None:intergenic 40.0%
TCAAGAGATCTACCCACAAA+TGG + chr7_1:79139572-79139591 Msa1041550:three_prime_UTR 40.0%
ATCTACCCACAAATGGCTTA+AGG + chr7_1:79139579-79139598 Msa1041550:three_prime_UTR 40.0%
CCAAACCTTAAGCCATTTGT+GGG - chr7_1:79139587-79139606 None:intergenic 40.0%
TCCAAACCTTAAGCCATTTG+TGG - chr7_1:79139588-79139607 None:intergenic 40.0%
CAGCAACAACGGTAAAATGA+AGG + chr7_1:79139710-79139729 Msa1041550:intron 40.0%
TTCCAATGAATGGGGTAACT+TGG - chr7_1:79139922-79139941 None:intergenic 40.0%
AAGTTACCCCATTCATTGGA+AGG + chr7_1:79139921-79139940 Msa1041550:three_prime_UTR 40.0%
AGTTACCCCATTCATTGGAA+GGG + chr7_1:79139922-79139941 Msa1041550:three_prime_UTR 40.0%
TCTTTCCCTTCCAATGAATG+GGG - chr7_1:79139930-79139949 None:intergenic 40.0%
CTATCAAGGAGAGGTTTCTA+TGG + chr7_1:79139970-79139989 Msa1041550:three_prime_UTR 40.0%
! CGTTGATTAGATGTCAGTTG+AGG + chr7_1:79140110-79140129 Msa1041550:three_prime_UTR 40.0%
CCAGCTCCGATTATTATCAC+CGG - chr7_1:79129828-79129847 None:intergenic 45.0%
ATAATCGGAGCTGGAACATC+CGG + chr7_1:79129834-79129853 Msa1041550:CDS 45.0%
! TTTTGTTAAGCAAGCTGCCG+TGG - chr7_1:79129865-79129884 None:intergenic 45.0%
GAAGGTGGAAAAGGAAAGTG+TGG - chr7_1:79129999-79130018 None:intergenic 45.0%
!! GGTGAAGTTGAGGAGTATTC+TGG + chr7_1:79130176-79130195 Msa1041550:CDS 45.0%
GAAGGGTTGGAGAGTTTCAA+AGG + chr7_1:79130254-79130273 Msa1041550:intron 45.0%
! CATCTGACTTGACAAGAAGG+AGG + chr7_1:79130834-79130853 Msa1041550:intron 45.0%
GTATGTGTTTGCTTTGGCAG+TGG + chr7_1:79131068-79131087 Msa1041550:intron 45.0%
!! GCGGATTGTTACTGCGATTT+TGG - chr7_1:79131109-79131128 None:intergenic 45.0%
!! TCTTAGCTTTGCTGCAAACG+CGG - chr7_1:79131128-79131147 None:intergenic 45.0%
TTTGGAGGGAAAACCTTTGG+AGG - chr7_1:79131243-79131262 None:intergenic 45.0%
AACTAGTGGTGATAGCAAGC+AGG + chr7_1:79131475-79131494 Msa1041550:CDS 45.0%
GTGATGCGGCCATACATATA+TGG + chr7_1:79131854-79131873 Msa1041550:intron 45.0%
! AACCAAGTGTTGTTCCGTGA+TGG + chr7_1:79131987-79132006 Msa1041550:CDS 45.0%
TTCCATCACGGAACAACACT+TGG - chr7_1:79131992-79132011 None:intergenic 45.0%
!!! AACGGAAGGAGTGTTTTGCA+AGG - chr7_1:79132234-79132253 None:intergenic 45.0%
! GGGTGGTGATCTTTTGAATG+AGG + chr7_1:79132894-79132913 Msa1041550:intron 45.0%
TGGTATGGTAAACCAGGCTT+TGG - chr7_1:79132928-79132947 None:intergenic 45.0%
AGCCTGGTTTACCATACCAT+TGG + chr7_1:79132929-79132948 Msa1041550:CDS 45.0%
AACCGTTCTTACCCTTCCAA+TGG - chr7_1:79132948-79132967 None:intergenic 45.0%
! TTTACTGCGTTGGGTTGTCA+AGG + chr7_1:79132968-79132987 Msa1041550:CDS 45.0%
!! TTGCTACATTTTGAGCGTCG+AGG - chr7_1:79133014-79133033 None:intergenic 45.0%
CGATTGTGTGCGATTTAGGA+TGG + chr7_1:79133135-79133154 Msa1041550:intron 45.0%
GTTAAGGTTTCTATACCCCG+AGG - chr7_1:79134880-79134899 None:intergenic 45.0%
AGAGTGATAGTTGTTGGAGC+AGG + chr7_1:79136136-79136155 Msa1041550:three_prime_UTR 45.0%
GATGGAAAAGAAGGTGGGAA+TGG - chr7_1:79136319-79136338 None:intergenic 45.0%
TCCTCTGTATCACAGAACAG+TGG + chr7_1:79136402-79136421 Msa1041550:three_prime_UTR 45.0%
TCCACTGTTCTGTGATACAG+AGG - chr7_1:79136406-79136425 None:intergenic 45.0%
GGTGAGGTTGAGGAATATGA+AGG + chr7_1:79136487-79136506 Msa1041550:three_prime_UTR 45.0%
!!! AGGTTTTTGGTTGTGGCTAG+TGG + chr7_1:79136511-79136530 Msa1041550:three_prime_UTR 45.0%
!! CATGTTCTTGTTGTTGGGTC+TGG + chr7_1:79136640-79136659 Msa1041550:three_prime_UTR 45.0%
GTTGTTGGGTCTGGAAATTC+TGG + chr7_1:79136649-79136668 Msa1041550:three_prime_UTR 45.0%
! TGGGTCTGGAAATTCTGGAA+TGG + chr7_1:79136654-79136673 Msa1041550:three_prime_UTR 45.0%
CTTCCCCAATATTCCCTTCA+CGG + chr7_1:79137123-79137142 Msa1041550:intron 45.0%
CTTCCGTGAAGGGAATATTG+GGG - chr7_1:79137129-79137148 None:intergenic 45.0%
! TCAAGGGGCATGCTGAATTT+GGG + chr7_1:79137517-79137536 Msa1041550:three_prime_UTR 45.0%
!! GGAGATGGTGGATTCAATGA+TGG + chr7_1:79137567-79137586 Msa1041550:three_prime_UTR 45.0%
ATATAAAAGGGACCCTCGCT+GGG - chr7_1:79137646-79137665 None:intergenic 45.0%
! CGAGGGTCCCTTTTATATGA+AGG + chr7_1:79137648-79137667 Msa1041550:three_prime_UTR 45.0%
! TCTTTCTTTTTGTGGTGGCC+GGG - chr7_1:79138049-79138068 None:intergenic 45.0%
GGACGAAGTGTGAGACTATA+AGG + chr7_1:79138340-79138359 Msa1041550:intron 45.0%
! TTTGGTGGAATTTGGAGTGG+TGG - chr7_1:79138570-79138589 Msa1041560:CDS 45.0%
! TTAAAACTGGCTCCAGAAGC+AGG + chr7_1:79138657-79138676 Msa1041550:intron 45.0%
! TAAAACTGGCTCCAGAAGCA+GGG + chr7_1:79138658-79138677 Msa1041550:intron 45.0%
TCGGTATCTGACCTAACGAT+CGG + chr7_1:79138817-79138836 Msa1041550:intron 45.0%
TCTTGGTTTAGCCGATCGTT+AGG - chr7_1:79138831-79138850 Msa1041560:intron 45.0%
!! CCTAACCCTTGCATTTTAGC+TGG - chr7_1:79138973-79138992 Msa1041560:CDS 45.0%
CCAGCTAAAATGCAAGGGTT+AGG + chr7_1:79138970-79138989 Msa1041550:intron 45.0%
! TTCAGGGGCAGAGATTTTGA+AGG - chr7_1:79139010-79139029 None:intergenic 45.0%
! CAAGTGAGGTACTTTGCAAG+GGG - chr7_1:79139283-79139302 None:intergenic 45.0%
TGTTGTTGTGACGTGACGAA+TGG + chr7_1:79139428-79139447 Msa1041550:intron 45.0%
GTTGTTGTGACGTGACGAAT+GGG + chr7_1:79139429-79139448 Msa1041550:intron 45.0%
CCCACAAATGGCTTAAGGTT+TGG + chr7_1:79139584-79139603 Msa1041550:intron 45.0%
TGAATGGGGTAACTTGGCTT+GGG - chr7_1:79139916-79139935 None:intergenic 45.0%
ATGAATGGGGTAACTTGGCT+TGG - chr7_1:79139917-79139936 None:intergenic 45.0%
AGCCAAGTTACCCCATTCAT+TGG + chr7_1:79139917-79139936 Msa1041550:three_prime_UTR 45.0%
TGTGTTGGACTATCAAGGAG+AGG + chr7_1:79139961-79139980 Msa1041550:three_prime_UTR 45.0%
TCAACGATCACGACGATATG+CGG - chr7_1:79140096-79140115 None:intergenic 45.0%
!!! TATTAGTTTTTATTATATTT+TGG - chr7_1:79135058-79135077 None:intergenic 5.0%
!! AATAAAAACTAATAATAATT+TGG + chr7_1:79135064-79135083 Msa1041550:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - chr7_1:79135458-79135477 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+AGG - chr7_1:79135459-79135478 None:intergenic 5.0%
!! ATTATCATAAAAAAAAAAAT+AGG - chr7_1:79135515-79135534 None:intergenic 5.0%
!! TTAAAAATAAAAAACTAATA+CGG - chr7_1:79138794-79138813 Msa1041560:intron 5.0%
!!! TAATCTAATTAATTATTTTT+TGG + chr7_1:79139854-79139873 Msa1041550:intron 5.0%
CCGGTGATAATAATCGGAGC+TGG + chr7_1:79129825-79129844 Msa1041550:CDS 50.0%
CTCGTGTACCTGAGGTTGAA+GGG + chr7_1:79130237-79130256 Msa1041550:CDS 50.0%
TGTACCTGAGGTTGAAGGGT+TGG + chr7_1:79130241-79130260 Msa1041550:intron 50.0%
!!! ACTGCGATTTTGGCTGAACG+TGG - chr7_1:79131099-79131118 None:intergenic 50.0%
! ACTAGTTTCTCCACCGTGCT+TGG - chr7_1:79131462-79131481 None:intergenic 50.0%
AAGCACGGTGGAGAAACTAG+TGG + chr7_1:79131461-79131480 Msa1041550:CDS 50.0%
AACGGGCCTTCACTAGGAAA+AGG - chr7_1:79131534-79131553 None:intergenic 50.0%
! GAGGATGGTTTTCCAAAGCC+TGG + chr7_1:79132913-79132932 Msa1041550:CDS 50.0%
!! GTGCCGATTGTGTGCGATTT+AGG + chr7_1:79133131-79133150 Msa1041550:intron 50.0%
AGCATGGGGACTTCTCAATC+TGG + chr7_1:79134460-79134479 Msa1041550:intron 50.0%
CTACATGCGTAACCAGTCCT+CGG + chr7_1:79134860-79134879 Msa1041550:intron 50.0%
TACATGCGTAACCAGTCCTC+GGG + chr7_1:79134861-79134880 Msa1041550:intron 50.0%
GGCATGAGATTGCGTAGACT+AGG + chr7_1:79135085-79135104 Msa1041550:intron 50.0%
GAGATGAAGCAAACAACCGG+AGG - chr7_1:79135258-79135277 None:intergenic 50.0%
CTGCTACTGAGAGACCAGAA+GGG - chr7_1:79136162-79136181 None:intergenic 50.0%
! GAAGGTGGGAATGGTTTGTG+AGG - chr7_1:79136310-79136329 None:intergenic 50.0%
TAAGGATTCCGGTGAGGTTG+AGG + chr7_1:79136477-79136496 Msa1041550:three_prime_UTR 50.0%
! GTCAAGGGGCATGCTGAATT+TGG + chr7_1:79137516-79137535 Msa1041550:three_prime_UTR 50.0%
! CAAGGGGCATGCTGAATTTG+GGG + chr7_1:79137518-79137537 Msa1041550:three_prime_UTR 50.0%
CATATAAAAGGGACCCTCGC+TGG - chr7_1:79137647-79137666 None:intergenic 50.0%
! CTTTCTTTTTGTGGTGGCCG+GGG - chr7_1:79138048-79138067 None:intergenic 50.0%
GCTTCAGTCTCAAGATCCAC+AGG + chr7_1:79138319-79138338 Msa1041550:intron 50.0%
TAGTCTCACACTTCGTCCTG+TGG - chr7_1:79138338-79138357 Msa1041560:CDS 50.0%
! AAAACTGGCTCCAGAAGCAG+GGG + chr7_1:79138659-79138678 Msa1041550:intron 50.0%
GTGGGTAGATCTCTTGAAGC+CGG - chr7_1:79139569-79139588 None:intergenic 50.0%
AGGAGAGGTTTCTATGGAGC+TGG + chr7_1:79139976-79139995 Msa1041550:three_prime_UTR 50.0%
AGGTTTCTATGGAGCTGGTG+CGG + chr7_1:79139981-79140000 Msa1041550:three_prime_UTR 50.0%
TTAAGCAAGCTGCCGTGGCT+AGG - chr7_1:79129860-79129879 None:intergenic 55.0%
AGCTGAACCTCGTGTACCTG+AGG + chr7_1:79130229-79130248 Msa1041550:CDS 55.0%
CCTTCAACCTCAGGTACACG+AGG - chr7_1:79130239-79130258 None:intergenic 55.0%
CCTCGTGTACCTGAGGTTGA+AGG + chr7_1:79130236-79130255 Msa1041550:CDS 55.0%
CTCTCCAACCCTTCAACCTC+AGG - chr7_1:79130248-79130267 None:intergenic 55.0%
CACGCAGATTCACGCTGCTA+CGG - chr7_1:79130666-79130685 None:intergenic 55.0%
CTATCTGTCACCAAGCACGG+TGG + chr7_1:79131449-79131468 Msa1041550:CDS 55.0%
ATGGTGAACGGGCCTTCACT+AGG - chr7_1:79131540-79131559 None:intergenic 55.0%
! ACTGCGTTGGGTTGTCAAGG+AGG + chr7_1:79132971-79132990 Msa1041550:CDS 55.0%
! CTGCGTTGGGTTGTCAAGGA+GGG + chr7_1:79132972-79132991 Msa1041550:CDS 55.0%
! TGCGTTGGGTTGTCAAGGAG+GGG + chr7_1:79132973-79132992 Msa1041550:CDS 55.0%
ACATGCGTAACCAGTCCTCG+GGG + chr7_1:79134862-79134881 Msa1041550:intron 55.0%
GGTTTCTATACCCCGAGGAC+TGG - chr7_1:79134875-79134894 None:intergenic 55.0%
GCTGCTACTGAGAGACCAGA+AGG - chr7_1:79136163-79136182 None:intergenic 55.0%
! GGAATTTGGAGTGGTGGAGG+AGG - chr7_1:79138564-79138583 Msa1041560:CDS 55.0%
! GGTGGAATTTGGAGTGGTGG+AGG - chr7_1:79138567-79138586 Msa1041560:CDS 55.0%
TGGAACATCCGGCCTAGCCA+CGG + chr7_1:79129845-79129864 Msa1041550:CDS 60.0%
GTTGTTGGAGCAGGCCCTTC+TGG + chr7_1:79136145-79136164 Msa1041550:three_prime_UTR 60.0%
AAGGTCCGGGGTTCAAACCC+CGG + chr7_1:79138028-79138047 Msa1041550:intron 60.0%
! TGGAGTGGTGGAGGAGGAAG+TGG - chr7_1:79138558-79138577 Msa1041560:CDS 60.0%
AAGGCCAATGCCCCTGCTTC+TGG - chr7_1:79138672-79138691 Msa1041560:CDS 60.0%
!! TGGAGTTGGTAGGCCCAGCG+AGG + chr7_1:79137630-79137649 Msa1041550:three_prime_UTR 65.0%
!! GGAGTTGGTAGGCCCAGCGA+GGG + chr7_1:79137631-79137650 Msa1041550:three_prime_UTR 65.0%
! GGCTCCAGAAGCAGGGGCAT+TGG + chr7_1:79138665-79138684 Msa1041550:intron 65.0%
GCAAGCTGCCGTGGCTAGGC+CGG - chr7_1:79129856-79129875 None:intergenic 70.0%
GGTGGCCGGGGTTTGAACCC+CGG - chr7_1:79138036-79138055 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 79129813 79140368 79129813 ID=Msa1041550;Name=Msa1041550
chr7_1 mRNA 79129813 79140368 79129813 ID=Msa1041550-mRNA-1;Parent=Msa1041550;Name=Msa1041550-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.7|0.54|1|0.5|0.36|11|1593|363
chr7_1 exon 79129813 79130031 79129813 ID=Msa1041550-mRNA-1:exon:21275;Parent=Msa1041550-mRNA-1
chr7_1 exon 79130047 79130258 79130047 ID=Msa1041550-mRNA-1:exon:21276;Parent=Msa1041550-mRNA-1
chr7_1 exon 79130298 79130424 79130298 ID=Msa1041550-mRNA-1:exon:21277;Parent=Msa1041550-mRNA-1
chr7_1 exon 79131399 79131632 79131399 ID=Msa1041550-mRNA-1:exon:21278;Parent=Msa1041550-mRNA-1
chr7_1 exon 79131954 79132079 79131954 ID=Msa1041550-mRNA-1:exon:21279;Parent=Msa1041550-mRNA-1
chr7_1 exon 79132895 79133050 79132895 ID=Msa1041550-mRNA-1:exon:21280;Parent=Msa1041550-mRNA-1
chr7_1 exon 79135952 79136735 79135952 ID=Msa1041550-mRNA-1:exon:21281;Parent=Msa1041550-mRNA-1
chr7_1 exon 79137505 79137738 79137505 ID=Msa1041550-mRNA-1:exon:21282;Parent=Msa1041550-mRNA-1
chr7_1 exon 79139475 79139600 79139475 ID=Msa1041550-mRNA-1:exon:21283;Parent=Msa1041550-mRNA-1
chr7_1 exon 79139880 79140296 79139880 ID=Msa1041550-mRNA-1:exon:21284;Parent=Msa1041550-mRNA-1
chr7_1 exon 79140319 79140368 79140319 ID=Msa1041550-mRNA-1:exon:21285;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79129813 79130031 79129813 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79130047 79130258 79130047 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79130298 79130424 79130298 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79131399 79131632 79131399 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79131954 79132079 79131954 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79132895 79133050 79132895 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 CDS 79135952 79135969 79135952 ID=Msa1041550-mRNA-1:cds;Parent=Msa1041550-mRNA-1
chr7_1 three_prime_UTR 79135970 79136735 79135970 ID=Msa1041550-mRNA-1:three_prime_utr;Parent=Msa1041550-mRNA-1
chr7_1 three_prime_UTR 79137505 79137738 79137505 ID=Msa1041550-mRNA-1:three_prime_utr;Parent=Msa1041550-mRNA-1
chr7_1 three_prime_UTR 79139475 79139600 79139475 ID=Msa1041550-mRNA-1:three_prime_utr;Parent=Msa1041550-mRNA-1
chr7_1 three_prime_UTR 79139880 79140296 79139880 ID=Msa1041550-mRNA-1:three_prime_utr;Parent=Msa1041550-mRNA-1
chr7_1 three_prime_UTR 79140319 79140368 79140319 ID=Msa1041550-mRNA-1:three_prime_utr;Parent=Msa1041550-mRNA-1
Gene Sequence

>Msa1041550

ATGCATGAAGCACCGGTGATAATAATCGGAGCTGGAACATCCGGCCTAGCCACGGCAGCTTGCTTAACAAAACAATCCATACCTTTCATCATTCTCGAAAGAGAAAACTGTTTTGCTTCTTTATGGCAAAACTACACCTACGATCGTGTTCATCTTCATCTAAGAAAACAACTTTGTGAGTTACCACACTTTCCTTTTCCACCTTCTTATCCTCACTATTTCATAGAATATTTAGGTAACTATGTCAACAACTTCAACATCAACCCTATATACAACAGAGCTGTTGAGTTAGCAGAGTATGTTGATGATGATGAGAAATGGAGGGTTAAAGCTGAGAATAAGAGTTCTGGTGAAGTTGAGGAGTATTCTGGAAGATTCTTGGTTGTTGCTAGTGGTGAAACAGCTGAACCTCGTGTACCTGAGGTTGAAGGGTACAAAAATGGAAAGGAGTTTAAAGATGAGCATGTTCTTGTTGTTGGTTCTGGTAATTCTGGTATGGAGATTGCTTTAGATTTGGCTAACTTTGGTGCTAAACCTTCAATCATTGTTAGAAGCCCGGTTCATTTTCTTTCTAGGGATATGATGTATTATGGGGGCGTTTTGTTTAACTATCTGTCACCAAGCACGGTGGAGAAACTAGTGGTGATAGCAAGCAGGATTGTGTATGGAGATCTGAGCAAATATGGTATACCTTTTCCTAGTGAAGGCCCGTTCACCATGAAGATGAAGTATGGCAAGTTTCCTATAATTGACGTGGGAACTGTCAAGAAAATCAAATCTGGAGAAATACAGGTGTTGCCAGCAGAAATAGAGAGCATAAGTGGTAACCAAGTGTTGTTCCGTGATGGAAAATCCTACCCATTTGACTCCATTATTTTCTGCACTGGTTTCAAGAGATCAACTCATAAATGGCTTAAGGGTGGTGATCTTTTGAATGAGGATGGTTTTCCAAAGCCTGGTTTACCATACCATTGGAAGGGTAAGAACGGTTTTTACTGCGTTGGGTTGTCAAGGAGGGGATTTTATGGAGCTAACCTCGACGCTCAAAATGTAGCAAATGATATTGCTATGCTGGATAAAAAACGGCAATAA
Protein sequence

>Msa1041550

MHEAPVIIIGAGTSGLATAACLTKQSIPFIILERENCFASLWQNYTYDRVHLHLRKQLCELPHFPFPPSYPHYFIEYLGNYVNNFNINPIYNRAVELAEYVDDDEKWRVKAENKSSGEVEEYSGRFLVVASGETAEPRVPEVEGYKNGKEFKDEHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSRDMMYYGGVLFNYLSPSTVEKLVVIASRIVYGDLSKYGIPFPSEGPFTMKMKYGKFPIIDVGTVKKIKSGEIQVLPAEIESISGNQVLFRDGKSYPFDSIIFCTGFKRSTHKWLKGGDLLNEDGFPKPGLPYHWKGKNGFYCVGLSRRGFYGANLDAQNVANDIAMLDKKRQ*