AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297470 MtrunA17_Chr4g0054661 98.281 349 1 2 1 349 1 344 0.0 681
Msa1297470 MtrunA17_Chr1g0165101 41.691 343 143 13 25 330 22 344 4.02e-53 181
Msa1297470 MtrunA17_Chr5g0397551 49.479 192 78 6 78 262 70 249 2.64e-45 159
Msa1297470 MtrunA17_Chr1g0179461 42.412 257 117 9 76 316 67 308 8.68e-45 159
Msa1297470 MtrunA17_Chr8g0349091 51.042 192 78 4 78 262 89 271 2.20e-44 157
Msa1297470 MtrunA17_Chr7g0247431 45.370 216 103 4 67 275 79 286 1.98e-42 152
Msa1297470 MtrunA17_Chr7g0245841 39.228 311 146 9 72 364 48 333 3.45e-42 151
Msa1297470 MtrunA17_Chr8g0386741 42.254 213 108 5 78 281 97 303 5.35e-41 149
Msa1297470 MtrunA17_Chr8g0351761 47.596 208 93 5 62 262 61 259 4.53e-37 138
Msa1297470 MtrunA17_Chr3g0086021 45.833 192 92 7 159 347 118 300 3.93e-36 134
Msa1297470 MtrunA17_Chr4g0056761 43.496 246 119 9 29 262 24 261 1.23e-35 134
Msa1297470 MtrunA17_Chr1g0188211 45.413 218 83 6 71 262 42 249 1.55e-35 134
Msa1297470 MtrunA17_Chr5g0398621 40.404 198 95 6 70 262 38 217 5.19e-34 127
Msa1297470 MtrunA17_Chr6g0476061 40.889 225 115 5 78 287 51 272 2.09e-33 127
Msa1297470 MtrunA17_Chr7g0274821 40.488 205 116 4 78 280 74 274 1.07e-27 112
Msa1297470 MtrunA17_Chr1g0190011 39.810 211 103 6 66 266 31 227 1.52e-26 108
Msa1297470 MtrunA17_Chr5g0398641 47.692 130 62 3 213 342 2 125 4.14e-23 94.4
Msa1297470 MtrunA17_Chr4g0027371 43.151 146 74 5 142 283 15 155 1.24e-22 96.3
Msa1297470 MtrunA17_Chr4g0027331 48.000 125 60 4 142 262 15 138 1.30e-22 93.2
Msa1297470 MtrunA17_Chr4g0027351 48.649 111 53 3 148 256 20 128 1.04e-21 90.5
Msa1297470 MtrunA17_Chr5g0400531 45.669 127 61 4 79 201 121 243 3.00e-20 89.7
Msa1297470 MtrunA17_Chr5g0400541 46.218 119 57 4 230 348 6 117 1.27e-19 84.0
Msa1297470 MtrunA17_Chr5g0400611 43.966 116 59 3 226 341 2 111 4.93e-19 82.4
Msa1297470 MtrunA17_Chr4g0027301 41.880 117 64 3 144 256 23 139 1.23e-18 82.0
Msa1297470 MtrunA17_Chr3g0133051 31.288 163 107 2 104 261 55 217 1.84e-17 82.4
Msa1297470 MtrunA17_Chr5g0417581 35.821 134 69 4 144 261 16 148 2.51e-17 80.1
Msa1297470 MtrunA17_Chr6g0476241 32.338 201 118 6 62 261 104 287 6.97e-15 75.1
Msa1297470 MtrunA17_Chr5g0427311 32.759 116 75 2 148 261 81 195 2.35e-13 69.3
Msa1297470 MtrunA17_Chr5g0400601 39.735 151 70 7 25 158 19 165 7.79e-13 67.4
Msa1297470 MtrunA17_Chr5g0398531 37.374 99 58 2 117 211 94 192 1.37e-11 65.5
Msa1297470 MtrunA17_Chr1g0168121 38.710 93 53 2 123 211 42 134 1.46e-11 64.7
Msa1297470 MtrunA17_Chr8g0351651 41.935 93 50 2 123 211 86 178 1.46e-11 65.1
Msa1297470 MtrunA17_Chr5g0443311 38.710 93 53 2 123 211 51 143 2.39e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297470 AT4G17950.1 47.573 309 121 11 78 347 131 437 5.01e-67 220
Msa1297470 AT5G46640.1 47.403 308 143 7 53 344 78 382 5.80e-64 210
Msa1297470 AT2G33620.1 50.584 257 109 7 78 325 97 344 1.70e-62 206
Msa1297470 AT2G33620.4 50.584 257 109 7 78 325 97 344 1.70e-62 206
Msa1297470 AT2G33620.2 50.584 257 109 7 78 325 97 344 1.70e-62 206
Msa1297470 AT2G33620.3 50.584 257 109 7 78 325 97 344 1.70e-62 206
Msa1297470 AT1G63470.1 49.479 192 86 5 78 262 105 292 1.02e-46 165
Msa1297470 AT4G25320.1 41.270 252 106 7 62 290 70 302 4.40e-46 164
Msa1297470 AT4G12080.1 47.500 200 92 5 76 262 87 286 3.81e-45 160
Msa1297470 AT2G45850.1 49.479 192 79 4 78 262 98 278 1.60e-42 153
Msa1297470 AT2G45850.2 49.479 192 79 4 78 262 98 278 1.60e-42 153
Msa1297470 AT3G61310.1 51.031 194 72 6 78 262 101 280 1.34e-41 150
Msa1297470 AT5G51590.1 43.348 233 99 6 62 262 63 294 3.20e-39 146
Msa1297470 AT2G45850.3 47.120 191 83 4 78 261 98 277 1.37e-38 140
Msa1297470 AT5G62260.1 42.308 208 92 7 78 263 76 277 1.17e-35 136
Msa1297470 AT5G62260.3 42.308 208 92 7 78 263 76 277 1.17e-35 136
Msa1297470 AT1G63480.5 42.857 196 82 7 78 262 93 269 3.53e-33 128
Msa1297470 AT1G63480.7 42.857 196 82 7 78 262 93 269 3.53e-33 128
Msa1297470 AT1G63480.4 42.857 196 82 7 78 262 93 269 3.53e-33 128
Msa1297470 AT1G63480.3 42.857 196 82 7 78 262 93 269 3.53e-33 128
Msa1297470 AT1G63480.6 42.857 196 82 7 78 262 93 269 3.53e-33 128
Msa1297470 AT1G63480.2 42.857 196 82 7 78 262 99 275 4.24e-33 128
Msa1297470 AT1G63480.1 42.857 196 82 7 78 262 99 275 4.24e-33 128
Msa1297470 AT4G00200.2 45.249 221 104 6 70 280 48 261 8.14e-33 126
Msa1297470 AT4G00200.1 45.249 221 104 6 70 280 48 261 8.14e-33 126
Msa1297470 AT4G22770.2 42.424 198 98 6 78 262 72 266 2.64e-32 125
Msa1297470 AT4G22770.1 42.424 198 98 6 78 262 72 266 2.64e-32 125
Msa1297470 AT3G04590.1 38.426 216 114 5 62 270 89 292 2.84e-32 124
Msa1297470 AT5G62260.2 41.000 200 92 6 78 256 76 270 9.53e-32 122
Msa1297470 AT3G04590.2 33.333 306 144 7 62 349 89 352 2.13e-31 124
Msa1297470 AT2G36560.1 32.018 228 115 7 62 273 38 241 3.95e-22 99.4
Msa1297470 AT3G60870.1 32.979 188 106 4 77 261 26 196 8.50e-19 86.3
Msa1297470 AT5G49700.1 35.374 147 87 4 123 261 56 202 4.64e-16 78.6
Msa1297470 AT5G28590.1 31.977 172 91 3 139 310 22 167 6.72e-14 70.9
Msa1297470 AT1G14490.2 35.211 142 86 3 126 261 27 168 8.43e-14 70.9
Msa1297470 AT1G14490.1 34.722 144 88 3 124 261 6 149 1.25e-13 70.1
Msa1297470 AT1G76500.1 34.615 156 78 5 123 261 72 220 4.60e-12 67.0

Find 137 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGTTGTGGTGGAGGAGTT+AGG 0.193785 8_3:+57841242 None:intergenic
GCTGCTTCGGCTGGTGATTC+TGG 0.200419 8_3:-57841008 Msa1297470:CDS
CGGCCTTCCTCTATGTTTCT+TGG 0.200857 8_3:+57840968 None:intergenic
CATCAAATCGAGGTCTAATT+TGG 0.244665 8_3:+57834752 None:intergenic
AGGGGCTGATGGACGAGTTT+TGG 0.248584 8_3:-57835945 Msa1297470:CDS
CTTCCCAAATGTTGAACTTT+GGG 0.256931 8_3:-57835571 Msa1297470:CDS
TTACCCGATTTCTGTCATTT+TGG 0.259052 8_3:-57835126 Msa1297470:CDS
ATGCGTAACTTCTTTAACTT+TGG 0.284218 8_3:+57841428 None:intergenic
TGTGAAGGGGCTGGCGGGAC+TGG 0.290659 8_3:-57840724 Msa1297470:intron
TCCTTTCGCTTCTCCGCAAT+CGG 0.293470 8_3:-57841174 Msa1297470:CDS
AGTTTATACGTTTCTGTTGC+AGG 0.307728 8_3:-57835965 Msa1297470:CDS
AGAGGAAGGCCGCCTGGCTC+TGG 0.316353 8_3:-57840957 Msa1297470:CDS
ATCTCCAAAATGACAGAAAT+CGG 0.322913 8_3:+57835122 None:intergenic
AGCTCAAGTATGGTGAAATC+TGG 0.330162 8_3:-57835611 Msa1297470:CDS
AAGTACAACTCTATGCTAAC+TGG 0.334139 8_3:+57841469 None:intergenic
CCTTCTTCTCCGTCGACGCT+TGG 0.334485 8_3:-57841125 Msa1297470:CDS
ATTATCATGGCAGTGGCGTT+TGG 0.350711 8_3:+57834796 None:intergenic
TCCGCAATCGGAGCCGTTCT+CGG 0.357222 8_3:-57841162 Msa1297470:CDS
TGGTTGTGGTGGAGGAGTTA+GGG 0.359168 8_3:+57841243 None:intergenic
AGATGTACCATCATCCACTA+TGG 0.369911 8_3:-57835409 Msa1297470:CDS
ATTTGGACTACATGGTTCAT+AGG 0.372471 8_3:+57834838 None:intergenic
GAAACCATGGAACTATGATT+TGG 0.376946 8_3:+57834821 None:intergenic
GGCCTTCCTCTATGTTTCTT+GGG 0.380388 8_3:+57840969 None:intergenic
GTTTGTATTCTTTCTGCCAT+TGG 0.388981 8_3:-57838616 Msa1297470:CDS
GTGCCCCAAAGTTCAACATT+TGG 0.390322 8_3:+57835567 None:intergenic
TGCCCCAAAGTTCAACATTT+GGG 0.390971 8_3:+57835568 None:intergenic
ACTTCCCAAATGTTGAACTT+TGG 0.393438 8_3:-57835572 Msa1297470:CDS
TTATCATGGCAGTGGCGTTT+GGG 0.394048 8_3:+57834797 None:intergenic
AGTCACATCACGGATGAGTT+TGG 0.395774 8_3:+57835381 None:intergenic
TGCTGCATATTATTATGAAC+AGG 0.398669 8_3:+57835431 None:intergenic
CACGTAATCTTGGTGGAGTC+TGG 0.407875 8_3:-57840691 Msa1297470:CDS
TTTGAGATCGTATCGCTATC+AGG 0.410818 8_3:-57836034 Msa1297470:CDS
CTTCTTCTCCGTCGACGCTT+GGG 0.411580 8_3:-57841124 Msa1297470:CDS
GCTACGTCTGCTGCTTCGGC+TGG 0.413263 8_3:-57841017 Msa1297470:CDS
TGCTGCTACGTCTGCTGCTT+CGG 0.414086 8_3:-57841021 Msa1297470:CDS
ATGCCGCTATCTGAAAATAA+TGG 0.420894 8_3:-57836007 Msa1297470:CDS
TGGTAACATTGCTCTTGGTT+TGG 0.422288 8_3:-57841063 Msa1297470:CDS
GCAGCAGACGTAGCAGCAAC+AGG 0.422783 8_3:+57841026 None:intergenic
GGTGGTGGTGGTTGTGGTGG+AGG 0.424873 8_3:+57841235 None:intergenic
ATAGCGATACGATCTCAAAT+TGG 0.429278 8_3:+57836038 None:intergenic
CCTGATGGTAACATTGCTCT+TGG 0.438107 8_3:-57841068 Msa1297470:CDS
TTCTCAGACGGGGCCTCGCA+CGG 0.439733 8_3:-57838638 Msa1297470:CDS
TCTTCAGAGGACTCGGTTGA+AGG 0.441723 8_3:+57835512 None:intergenic
ATCCTTCGACAGCCAGCATC+AGG 0.443815 8_3:-57838577 Msa1297470:CDS
GGACTCTAATGATGCTAGCC+AGG 0.447584 8_3:-57835163 Msa1297470:CDS
GCAGCAACAGGAGAAGAAAC+AGG 0.448169 8_3:+57841038 None:intergenic
AAGTTCAACATTTGGGAAGT+TGG 0.448266 8_3:+57835575 None:intergenic
AAACGTATAAACTGCTTGTT+CGG 0.449528 8_3:+57835975 None:intergenic
CATTGTGGGTAGCTTTATTG+TGG 0.456598 8_3:-57835648 Msa1297470:CDS
AACTGCTTCTTCCCAGAGCC+AGG 0.459179 8_3:+57840945 None:intergenic
ATTCACTCCACACGTAATCT+TGG 0.462480 8_3:-57840701 Msa1297470:CDS
TTGTGGTGGTGGTGCTGAGC+GGG 0.462707 8_3:+57841325 None:intergenic
GTTCGCGGTGGTGGTGGTTG+TGG 0.466328 8_3:+57841229 None:intergenic
AGAAGAAACGTGGCCGGCCG+AGG 0.468567 8_3:-57841100 Msa1297470:CDS
GTTTCTGTTGCAGGGGCTGA+TGG 0.469136 8_3:-57835956 Msa1297470:CDS
GTTTATACGTTTCTGTTGCA+GGG 0.472580 8_3:-57835964 Msa1297470:CDS
TGCCATGATGTTCGCGTTCG+CGG 0.479937 8_3:+57841214 None:intergenic
TGTTCTGTGAAGGGGCTGGC+GGG 0.481737 8_3:-57840729 Msa1297470:intron
TGGGAAGTTGGCGCTGAAGA+AGG 0.484796 8_3:+57835587 None:intergenic
CTGATCATGGTGGTGTTAGT+TGG 0.488202 8_3:+57841266 None:intergenic
GATGTTCGCGTTCGCGGTGG+TGG 0.492399 8_3:+57841220 None:intergenic
GTTCGCGTTCGCGGTGGTGG+TGG 0.495725 8_3:+57841223 None:intergenic
ATCATTAAATAGGTCATTGT+GGG 0.496459 8_3:-57835662 Msa1297470:intron
CCGTTCTCGGTTACTCATGA+TGG 0.501543 8_3:-57841149 Msa1297470:CDS
CCTTGAGAAGTGGGACTAGT+TGG 0.505345 8_3:+57835536 None:intergenic
CGCGGTGGTGGTGGTTGTGG+TGG 0.507512 8_3:+57841232 None:intergenic
CCAAGCGTCGACGGAGAAGA+AGG 0.512908 8_3:+57841125 None:intergenic
AAACATAGAGGAAGGCCGCC+TGG 0.516010 8_3:-57840963 Msa1297470:CDS
AACTGCAGCGTCAACTGTAC+AGG 0.516489 8_3:-57835900 Msa1297470:intron
ATAGTTGGTTGTTGTGGTGG+TGG 0.516737 8_3:+57841314 None:intergenic
ACCATCATAGTTGGTTGTTG+TGG 0.519960 8_3:+57841308 None:intergenic
TTCTTCTTCCCAAGCGTCGA+CGG 0.520639 8_3:+57841116 None:intergenic
CTTGCAATACTGCCTGATGC+TGG 0.521092 8_3:+57838565 None:intergenic
TCTCCAAAATGACAGAAATC+GGG 0.526144 8_3:+57835123 None:intergenic
TGGGTAGCTTTATTGTGGAT+CGG 0.529768 8_3:-57835643 Msa1297470:CDS
CCAAGAGCAATGTTACCATC+AGG 0.529900 8_3:+57841068 None:intergenic
GGAGGAGTTAGGGCTGATCA+TGG 0.532511 8_3:+57841253 None:intergenic
TACACGGCTGATTGCACCAA+TGG 0.532609 8_3:+57838600 None:intergenic
TACCATCATCCACTATGGGC+TGG 0.533253 8_3:-57835404 Msa1297470:CDS
AGGCAGTATTGCAAGATATG+AGG 0.539036 8_3:-57838557 Msa1297470:intron
ATCATAGTTGGTTGTTGTGG+TGG 0.539257 8_3:+57841311 None:intergenic
CTTCCTCTATGTTTCTTGGG+AGG 0.544998 8_3:+57840972 None:intergenic
GAACTATGATTTGGACTACA+TGG 0.545651 8_3:+57834830 None:intergenic
ACCGAGAACGGCTCCGATTG+CGG 0.546314 8_3:+57841161 None:intergenic
GCTCAAGTATGGTGAAATCT+GGG 0.547447 8_3:-57835610 Msa1297470:CDS
TTCCCAAATGTTGAACTTTG+GGG 0.547879 8_3:-57835570 Msa1297470:CDS
AAAGGAAAACGAGCTGTAGC+GGG 0.548872 8_3:+57841191 None:intergenic
CACCGCGAACGCGAACATCA+TGG 0.549848 8_3:-57841216 Msa1297470:CDS
GTTGAAGGCCCTTGAGAAGT+GGG 0.549945 8_3:+57835527 None:intergenic
CACTCCACACGTAATCTTGG+TGG 0.551149 8_3:-57840698 Msa1297470:CDS
ACCACAACAACCAACTATGA+TGG 0.551309 8_3:-57841309 Msa1297470:CDS
ATGTTTCTTGGGAGGCGCAT+CGG 0.555975 8_3:+57840980 None:intergenic
AGCTGCAATTATCATGGCAG+TGG 0.556845 8_3:+57834789 None:intergenic
AAGAAGCAGTTAGATGCGCT+TGG 0.557171 8_3:-57840933 Msa1297470:intron
AATCATTAAATAGGTCATTG+TGG 0.560294 8_3:-57835663 Msa1297470:intron
CACATTCATCATCATCGCAA+TGG 0.564445 8_3:-57841351 Msa1297470:exon
CCATCAGGCGAGTATTTCCT+CGG 0.564519 8_3:+57841083 None:intergenic
ACAACAACCAACTATGATGG+TGG 0.565793 8_3:-57841306 Msa1297470:CDS
GTGGGACCCACCATCATAGT+TGG 0.566141 8_3:+57841299 None:intergenic
GGTTGAAGGCCCTTGAGAAG+TGG 0.567069 8_3:+57835526 None:intergenic
GGCCAGCCCATAGTGGATGA+TGG 0.569591 8_3:+57835402 None:intergenic
TGCCTGATGCTGGCTGTCGA+AGG 0.570650 8_3:+57838575 None:intergenic
GTGGGACTAGTTGGAGTCGT+AGG 0.570937 8_3:+57835545 None:intergenic
ACGTTGAGCTGCAATTATCA+TGG 0.571270 8_3:+57834783 None:intergenic
GTAATGCAAGAGCATATCCC+TGG 0.571436 8_3:+57835145 None:intergenic
CAGGCGAGTATTTCCTCGGC+CGG 0.572255 8_3:+57841087 None:intergenic
TTGTTCTGTGAAGGGGCTGG+CGG 0.573092 8_3:-57840730 Msa1297470:intron
CCAACTAGTCCCACTTCTCA+AGG 0.574293 8_3:-57835536 Msa1297470:CDS
TGAGTTTGGCCAGCCCATAG+TGG 0.574892 8_3:+57835395 None:intergenic
TAGTCCAAATCATAGTTCCA+TGG 0.575493 8_3:-57834825 Msa1297470:CDS
CCGAGGAAATACTCGCCTGA+TGG 0.578030 8_3:-57841083 Msa1297470:CDS
TTAGCATTATTGTAGAGTCC+AGG 0.578840 8_3:+57835458 None:intergenic
GACTCTAATGATGCTAGCCA+GGG 0.589921 8_3:-57835162 Msa1297470:CDS
GATGTACCATCATCCACTAT+GGG 0.594019 8_3:-57835408 Msa1297470:CDS
CCATCATGAGTAACCGAGAA+CGG 0.595797 8_3:+57841149 None:intergenic
GTGGCGTTTGGGTGAAACCA+TGG 0.600770 8_3:+57834808 None:intergenic
GAAAGAATACAAACCGTGCG+AGG 0.602124 8_3:+57838625 None:intergenic
CTCCCAAGAAACATAGAGGA+AGG 0.609864 8_3:-57840971 Msa1297470:CDS
GAAAGGAAAACGAGCTGTAG+CGG 0.611310 8_3:+57841190 None:intergenic
GTTGTGGTGGTGGTGCTGAG+CGG 0.612909 8_3:+57841324 None:intergenic
GCGCCTCCCAAGAAACATAG+AGG 0.615372 8_3:-57840975 Msa1297470:CDS
TTGGGAAGAAGAAACGTGGC+CGG 0.619996 8_3:-57841106 Msa1297470:CDS
TTTATACGTTTCTGTTGCAG+GGG 0.621454 8_3:-57835963 Msa1297470:CDS
CTGGCTGTCGAAGGATTACA+CGG 0.626406 8_3:+57838584 None:intergenic
GACTCCACCAAGATTACGTG+TGG 0.626724 8_3:+57840694 None:intergenic
CAACAACCAACTATGATGGT+GGG 0.627987 8_3:-57841305 Msa1297470:CDS
TCCGATTGCGGAGAAGCGAA+AGG 0.631712 8_3:+57841173 None:intergenic
CAACTAGTCCCACTTCTCAA+GGG 0.634234 8_3:-57835535 Msa1297470:CDS
TTAGTTGGAGCGTAAGATGT+GGG 0.639365 8_3:+57841281 None:intergenic
AGTACAACTCTATGCTAACT+GGG 0.649222 8_3:+57841470 None:intergenic
GGAGTTAGGGCTGATCATGG+TGG 0.664072 8_3:+57841256 None:intergenic
AATCTTGGTGGAGTCTGGTG+AGG 0.665460 8_3:-57840686 Msa1297470:intron
CATGATGTTCGCGTTCGCGG+TGG 0.673272 8_3:+57841217 None:intergenic
GTTAGTTGGAGCGTAAGATG+TGG 0.680502 8_3:+57841280 None:intergenic
TGCTTCTTCCCAGAGCCAGG+CGG 0.696438 8_3:+57840948 None:intergenic
TGTCTGTCTGTACTCAGCAG+CGG 0.722995 8_3:-57835096 Msa1297470:CDS
ACGCTTGGGAAGAAGAAACG+TGG 0.737388 8_3:-57841110 Msa1297470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACATACATTTAAATAAA+TGG + chr8_3:57836775-57836794 None:intergenic 10.0%
!!! TAAATGTATGTATATTATTT+TGG - chr8_3:57836781-57836800 Msa1297470:intron 10.0%
!!! GTTATTTTATTTATTTATGT+TGG - chr8_3:57837454-57837473 Msa1297470:intron 10.0%
!!! TTTTATTTTGCTTATAATTT+GGG + chr8_3:57838599-57838618 None:intergenic 10.0%
!!! ATTTTATTTTGCTTATAATT+TGG + chr8_3:57838600-57838619 None:intergenic 10.0%
!! TAATTAAATATGATAAAAGT+TGG - chr8_3:57838812-57838831 Msa1297470:intron 10.0%
!!! AAAAAGTTGATAATTAATAT+TGG - chr8_3:57840029-57840048 Msa1297470:intron 10.0%
!!! TAATCACTTTTAAAAGTTTT+TGG - chr8_3:57835730-57835749 Msa1297470:intron 15.0%
!!! AATCACTTTTAAAAGTTTTT+GGG - chr8_3:57835731-57835750 Msa1297470:intron 15.0%
!! AATATAGTATTAAAGTCTAT+CGG + chr8_3:57836408-57836427 None:intergenic 15.0%
!! AAATTGTCAAATAGATTAAA+AGG + chr8_3:57837154-57837173 None:intergenic 15.0%
!! AATATTATATTAGCAGAAAA+TGG + chr8_3:57838498-57838517 None:intergenic 15.0%
!!! AGTTTTTTTGCTTATAATTT+GGG - chr8_3:57838869-57838888 Msa1297470:intron 15.0%
!!! TTTTTTTTTTTGCAACAAAA+TGG + chr8_3:57839278-57839297 None:intergenic 15.0%
!!! AAAAAAAAAAAAAAAGCATC+TGG - chr8_3:57839289-57839308 Msa1297470:intron 15.0%
!!! TTTTTGTTTGTTTTTTCAAA+AGG - chr8_3:57840057-57840076 Msa1297470:intron 15.0%
!! TTTCATAGTTAAAATGTAAA+AGG - chr8_3:57841321-57841340 Msa1297470:CDS 15.0%
!!! ACTTAACAAAAACAATTTTC+TGG + chr8_3:57835826-57835845 None:intergenic 20.0%
!!! TTAAGTGATCTGTTTTAAAA+AGG - chr8_3:57835840-57835859 Msa1297470:intron 20.0%
!!! TAAGTGATCTGTTTTAAAAA+GGG - chr8_3:57835841-57835860 Msa1297470:intron 20.0%
!!! TTAAAAAGGGATTTTCATTA+TGG - chr8_3:57835854-57835873 Msa1297470:intron 20.0%
!!! TAATTACTTTTTCCAACTTT+GGG + chr8_3:57835982-57836001 None:intergenic 20.0%
!!! ATAATTACTTTTTCCAACTT+TGG + chr8_3:57835983-57836002 None:intergenic 20.0%
!! AAGAATACAAATTGAAAACA+GGG - chr8_3:57836035-57836054 Msa1297470:CDS 20.0%
!!! AGGTATTTAGGTTTTTATAT+TGG - chr8_3:57836209-57836228 Msa1297470:intron 20.0%
!!! GGTATTTAGGTTTTTATATT+GGG - chr8_3:57836210-57836229 Msa1297470:intron 20.0%
!!! TTCAAGTTTTCTTTAGTTAT+TGG - chr8_3:57836607-57836626 Msa1297470:intron 20.0%
!! AATCTATTTGACAATTTAAG+AGG - chr8_3:57837157-57837176 Msa1297470:intron 20.0%
!!! ATGTATTAGTTGTTCTTTTT+TGG - chr8_3:57837323-57837342 Msa1297470:intron 20.0%
!! ATAAACAAAGCTTAATACAA+TGG + chr8_3:57837753-57837772 None:intergenic 20.0%
!! AGAAAGAAAAACAGAATAAA+GGG - chr8_3:57838082-57838101 Msa1297470:intron 20.0%
!! TAGGATGTTAAATATATAGA+TGG - chr8_3:57838556-57838575 Msa1297470:intron 20.0%
!! TTTCTATGAAACTTATTCTA+AGG + chr8_3:57838683-57838702 None:intergenic 20.0%
!!! AGAAAGATAACAATTTTCAT+TGG - chr8_3:57838698-57838717 Msa1297470:intron 20.0%
!! TTAGTTATAGAGAAAATGAA+AGG - chr8_3:57838724-57838743 Msa1297470:intron 20.0%
!! TAGTTATAGAGAAAATGAAA+GGG - chr8_3:57838725-57838744 Msa1297470:intron 20.0%
!!! GTCTTTTTTGCATAAAATTT+GGG - chr8_3:57838834-57838853 Msa1297470:intron 20.0%
!!! GAGTTTTTTTGCTTATAATT+TGG - chr8_3:57838868-57838887 Msa1297470:intron 20.0%
!! AAAAAGTAAAAGTGATTGAT+CGG - chr8_3:57839015-57839034 Msa1297470:intron 20.0%
!! ATAGTTTCTTATGAGAAAAA+AGG - chr8_3:57839077-57839096 Msa1297470:intron 20.0%
!! ATCATTGTTATATCTGTTAT+TGG - chr8_3:57839169-57839188 Msa1297470:intron 20.0%
!! TTAACTGCAATTTAGAAAAA+TGG + chr8_3:57839654-57839673 None:intergenic 20.0%
!! TTAAGAGATAAAATTAACCA+GGG - chr8_3:57839670-57839689 Msa1297470:intron 20.0%
!!! CATAATTTTATAACATCTCT+CGG + chr8_3:57839732-57839751 None:intergenic 20.0%
!! ATTTAATAATTCAAGGCTTT+GGG - chr8_3:57839763-57839782 Msa1297470:intron 20.0%
!!! AAGTTGATAATTAATATTGG+TGG - chr8_3:57840032-57840051 Msa1297470:intron 20.0%
!!! GTCTAAAATTTCATATCAAT+TGG - chr8_3:57840373-57840392 Msa1297470:intron 20.0%
!! ATATATATGGGTAAATTTCA+TGG + chr8_3:57840412-57840431 None:intergenic 20.0%
!!! AGCTTTGAGAAAATATATAT+GGG + chr8_3:57840424-57840443 None:intergenic 20.0%
!!! AAGCTTTGAGAAAATATATA+TGG + chr8_3:57840425-57840444 None:intergenic 20.0%
!!! AAGTTCTTGTATTTTACTAT+TGG - chr8_3:57840481-57840500 Msa1297470:intron 20.0%
!!! AGTTCTTGTATTTTACTATT+GGG - chr8_3:57840482-57840501 Msa1297470:intron 20.0%
!!! AAAAGTAGAGTATCAAAATT+TGG + chr8_3:57840540-57840559 None:intergenic 20.0%
!!! ACATTTTCCAATCATTAAAT+AGG - chr8_3:57840563-57840582 Msa1297470:intron 20.0%
!!! ATCATAATAGTAATTTTAGC+AGG - chr8_3:57840751-57840770 Msa1297470:intron 20.0%
!!! TCATAATAGTAATTTTAGCA+GGG - chr8_3:57840752-57840771 Msa1297470:intron 20.0%
!!! TTTTGATTATATATTACCGT+AGG - chr8_3:57841050-57841069 Msa1297470:CDS 20.0%
!! TTTGATTATATATTACCGTA+GGG - chr8_3:57841051-57841070 Msa1297470:CDS 20.0%
! TTAAATGTAATCACATGTGT+CGG + chr8_3:57835376-57835395 None:intergenic 25.0%
!! ATTTAATTTAAGCGCTTAAG+TGG - chr8_3:57835436-57835455 Msa1297470:CDS 25.0%
!!! TTTTTTGTTTGTTCTGTGAA+GGG - chr8_3:57835497-57835516 Msa1297470:CDS 25.0%
!!! TGCTATATTTTTGTTATCAG+AGG - chr8_3:57835606-57835625 Msa1297470:CDS 25.0%
!!! ATCTTATTTGAAGCAGATTT+TGG + chr8_3:57835787-57835806 None:intergenic 25.0%
!! TTTTGTAATCTGTAACAAAC+AGG - chr8_3:57835934-57835953 Msa1297470:CDS 25.0%
! GAAGAATACAAATTGAAAAC+AGG - chr8_3:57836034-57836053 Msa1297470:CDS 25.0%
! TAAATCCTAACATATGTTGA+CGG - chr8_3:57836162-57836181 Msa1297470:intron 25.0%
!! TGTCAAAATTATTGGCTATT+AGG - chr8_3:57836189-57836208 Msa1297470:intron 25.0%
!! TTATTGGCTATTAGGTATTT+AGG - chr8_3:57836197-57836216 Msa1297470:intron 25.0%
! ATTATCTCTATTCTCTATGT+GGG - chr8_3:57836301-57836320 Msa1297470:intron 25.0%
! TGAAATGAGTTTATAAAGAG+AGG + chr8_3:57836494-57836513 None:intergenic 25.0%
! TCTCTTTATAAACTCATTTC+AGG - chr8_3:57836493-57836512 Msa1297470:intron 25.0%
!! ATTTGTGTTTTTCCCAATAT+GGG - chr8_3:57836538-57836557 Msa1297470:intron 25.0%
!!! TTTCCTTTGATGTTTTAGTT+AGG - chr8_3:57836567-57836586 Msa1297470:intron 25.0%
!!! TTCCTTTGATGTTTTAGTTA+GGG - chr8_3:57836568-57836587 Msa1297470:intron 25.0%
!!! TTATGTTGGTTCACTATTAA+TGG - chr8_3:57836654-57836673 Msa1297470:intron 25.0%
! CTTTATAAGTTACAATGAAG+AGG + chr8_3:57836726-57836745 None:intergenic 25.0%
!!! TAAGGGTTCTTAATCTTTTT+TGG - chr8_3:57836839-57836858 Msa1297470:intron 25.0%
! AAAATGAAGATCTCAATTTG+AGG + chr8_3:57836922-57836941 None:intergenic 25.0%
! ATAATGTCAGTTAACAATCT+CGG + chr8_3:57837224-57837243 None:intergenic 25.0%
!!! AGTTGTTCTTTTTTGGTATA+TGG - chr8_3:57837330-57837349 Msa1297470:intron 25.0%
! TTTGGTATATGGTATAAAAC+AGG - chr8_3:57837341-57837360 Msa1297470:intron 25.0%
!!! TCTGAATTACTATTTTGATG+TGG - chr8_3:57837393-57837412 Msa1297470:intron 25.0%
! GAGAAAGAAAAACAGAATAA+AGG - chr8_3:57838081-57838100 Msa1297470:intron 25.0%
!!! TCTAGAAAGTATTATTGTTG+GGG + chr8_3:57838374-57838393 None:intergenic 25.0%
!!! CTCTAGAAAGTATTATTGTT+GGG + chr8_3:57838375-57838394 None:intergenic 25.0%
!!! CATTTGAAGTTTGTGTTTTT+CGG - chr8_3:57838457-57838476 Msa1297470:intron 25.0%
! TTAACATCCTAAAATTTCTC+AGG + chr8_3:57838547-57838566 None:intergenic 25.0%
!! ATTTTGCTTATAATTTGGGA+CGG + chr8_3:57838595-57838614 None:intergenic 25.0%
!!! GGTCTTTTTTGCATAAAATT+TGG - chr8_3:57838833-57838852 Msa1297470:intron 25.0%
!! TTTTTGCTTATAATTTGGGA+CGG - chr8_3:57838873-57838892 Msa1297470:intron 25.0%
!!! TCAATCACTTTTACTTTTTG+AGG + chr8_3:57839014-57839033 None:intergenic 25.0%
! AAAAGAGCAAGTATAAAGTT+TGG + chr8_3:57839042-57839061 None:intergenic 25.0%
! TCAGTTTCCTATCAATTTAA+GGG + chr8_3:57839132-57839151 None:intergenic 25.0%
! TTCAGTTTCCTATCAATTTA+AGG + chr8_3:57839133-57839152 None:intergenic 25.0%
! CCAAGAACATTATGAAAAAA+CGG - chr8_3:57839394-57839413 Msa1297470:intron 25.0%
! TGTTTGACACAAATCAATTA+TGG - chr8_3:57839420-57839439 Msa1297470:intron 25.0%
! GTTAAGAGATAAAATTAACC+AGG - chr8_3:57839669-57839688 Msa1297470:intron 25.0%
! TGCCATCATTTAATAATTCA+AGG - chr8_3:57839756-57839775 Msa1297470:intron 25.0%
! AGCCTTGAATTATTAAATGA+TGG + chr8_3:57839761-57839780 None:intergenic 25.0%
! CATTTAATAATTCAAGGCTT+TGG - chr8_3:57839762-57839781 Msa1297470:intron 25.0%
! AAAGGAATATTAACATACAG+CGG + chr8_3:57839892-57839911 None:intergenic 25.0%
! TGTTAATATTCCTTTATCAC+AGG - chr8_3:57839897-57839916 Msa1297470:intron 25.0%
! TCTTTATCTTTAAACACTTG+TGG - chr8_3:57840102-57840121 Msa1297470:intron 25.0%
!! GTTCTTGTATTTTACTATTG+GGG - chr8_3:57840483-57840502 Msa1297470:intron 25.0%
!! TTCTTGTATTTTACTATTGG+GGG - chr8_3:57840484-57840503 Msa1297470:intron 25.0%
! ACAATGACCTATTTAATGAT+TGG + chr8_3:57840573-57840592 None:intergenic 25.0%
! AATCATTAAATAGGTCATTG+TGG - chr8_3:57840572-57840591 Msa1297470:intron 25.0%
! ATCATTAAATAGGTCATTGT+GGG - chr8_3:57840573-57840592 Msa1297470:intron 25.0%
!! ATTATGATCATTTTCTTCAG+AGG + chr8_3:57840739-57840758 None:intergenic 25.0%
!!! CATAATAGTAATTTTAGCAG+GGG - chr8_3:57840753-57840772 Msa1297470:intron 25.0%
! ACTTCAACAAAAACCTAATT+GGG + chr8_3:57841027-57841046 None:intergenic 25.0%
! TACTTCAACAAAAACCTAAT+TGG + chr8_3:57841028-57841047 None:intergenic 25.0%
! TAGTTAAAATGTAAAAGGCA+CGG - chr8_3:57841326-57841345 Msa1297470:CDS 25.0%
! ATGCGTAACTTCTTTAACTT+TGG + chr8_3:57834810-57834829 None:intergenic 30.0%
TAAATGTAATCACATGTGTC+GGG + chr8_3:57835375-57835394 None:intergenic 30.0%
!!! GTTTTTTGTTTGTTCTGTGA+AGG - chr8_3:57835496-57835515 Msa1297470:CDS 30.0%
!! TTTTTGTTTGTTCTGTGAAG+GGG - chr8_3:57835498-57835517 Msa1297470:CDS 30.0%
!! CACTTTTAAAAGTTTTTGGG+TGG - chr8_3:57835734-57835753 Msa1297470:intron 30.0%
TACAAATTGAAAACAGGGTT+TGG - chr8_3:57836040-57836059 Msa1297470:CDS 30.0%
! CAAATCTAGAGTGATTTAGT+TGG - chr8_3:57836110-57836129 Msa1297470:intron 30.0%
ATTTACAATGCGATTAGAGA+TGG + chr8_3:57836140-57836159 None:intergenic 30.0%
!! CTTTACAAGCTGATTTTGTA+AGG + chr8_3:57836246-57836265 None:intergenic 30.0%
CATTATCTCTATTCTCTATG+TGG - chr8_3:57836300-57836319 Msa1297470:intron 30.0%
! GATTTGTGTTTTTCCCAATA+TGG - chr8_3:57836537-57836556 Msa1297470:intron 30.0%
! TTTGTGTTTTTCCCAATATG+GGG - chr8_3:57836539-57836558 Msa1297470:intron 30.0%
!!! TCCTTTGATGTTTTAGTTAG+GGG - chr8_3:57836569-57836588 Msa1297470:intron 30.0%
AACTAGCAGTACAATTTGTA+AGG + chr8_3:57836634-57836653 None:intergenic 30.0%
!!! TTGTACTGCTAGTTTTATGT+TGG - chr8_3:57836640-57836659 Msa1297470:intron 30.0%
!!! ATTGCTCTGAGGTAATTTTA+AGG - chr8_3:57836821-57836840 Msa1297470:intron 30.0%
!!! TTGCTCTGAGGTAATTTTAA+GGG - chr8_3:57836822-57836841 Msa1297470:intron 30.0%
TAGAGCTGTAGAACTTTAAA+AGG + chr8_3:57836984-57837003 None:intergenic 30.0%
! ACCAATTTTACACGCAATAA+AGG + chr8_3:57837015-57837034 None:intergenic 30.0%
GAATTTGATGAACTCAATGA+TGG + chr8_3:57837091-57837110 None:intergenic 30.0%
ACTTCACAGCAACAAATATA+AGG + chr8_3:57837113-57837132 None:intergenic 30.0%
! TGTGAAGTGTGTGTTAATTT+TGG - chr8_3:57837125-57837144 Msa1297470:intron 30.0%
TAAAACAGGCAGGAAAAAAA+TGG - chr8_3:57837355-57837374 Msa1297470:intron 30.0%
AAAACAGGCAGGAAAAAAAT+GGG - chr8_3:57837356-57837375 Msa1297470:intron 30.0%
! TTGATGTGGATGCATTTTAT+TGG - chr8_3:57837407-57837426 Msa1297470:intron 30.0%
! TGATGTGGATGCATTTTATT+GGG - chr8_3:57837408-57837427 Msa1297470:intron 30.0%
GGACATTACAGAAAAAGTTA+TGG - chr8_3:57837570-57837589 Msa1297470:intron 30.0%
! AAAGTGAAACTGTGTACTTT+TGG - chr8_3:57837962-57837981 Msa1297470:intron 30.0%
TATGCAAAACTATTTCAAGC+TGG + chr8_3:57837993-57838012 None:intergenic 30.0%
!! TAATCTCTATTGACTTGAGA+AGG - chr8_3:57838013-57838032 Msa1297470:intron 30.0%
AAGAAAAACAGAATAAAGGG+AGG - chr8_3:57838085-57838104 Msa1297470:intron 30.0%
AGAAAAACAGAATAAAGGGA+GGG - chr8_3:57838086-57838105 Msa1297470:intron 30.0%
CAAAATTCAAATATTGCCCA+TGG - chr8_3:57838139-57838158 Msa1297470:intron 30.0%
!!! AAGTTCTGTTTTGTTTTGCA+TGG - chr8_3:57838318-57838337 Msa1297470:intron 30.0%
!! CCTCTAGAAAGTATTATTGT+TGG + chr8_3:57838376-57838395 None:intergenic 30.0%
CCAACAATAATACTTTCTAG+AGG - chr8_3:57838373-57838392 Msa1297470:intron 30.0%
CAAACGTAATATTGTGTAAC+AGG + chr8_3:57838434-57838453 None:intergenic 30.0%
TAATATTCATCCCAACACAA+AGG - chr8_3:57838511-57838530 Msa1297470:intron 30.0%
TAAAATTTCTCAGGTGAAAG+AGG + chr8_3:57838538-57838557 None:intergenic 30.0%
! TCTTTCACCTGAGAAATTTT+AGG - chr8_3:57838537-57838556 Msa1297470:intron 30.0%
!! TTAGTATGGTATTGACTACT+TGG - chr8_3:57838972-57838991 Msa1297470:intron 30.0%
GTTTCTTATGAGAAAAAAGG+TGG - chr8_3:57839080-57839099 Msa1297470:intron 30.0%
ACTTACATGTCATCAACTTA+TGG + chr8_3:57839325-57839344 None:intergenic 30.0%
! TTGATGACATGTAAGTTTAG+AGG - chr8_3:57839329-57839348 Msa1297470:intron 30.0%
TGAAAAAGCTCAAATTGTCT+TGG - chr8_3:57839361-57839380 Msa1297470:intron 30.0%
!!! CCGTTTTTTCATAATGTTCT+TGG + chr8_3:57839397-57839416 None:intergenic 30.0%
ATTTCAATCTTCACGGTATT+TGG + chr8_3:57839464-57839483 None:intergenic 30.0%
ACCTAACATTTCAATCTTCA+CGG + chr8_3:57839471-57839490 None:intergenic 30.0%
AAGATTGAAATGTTAGGTGA+AGG - chr8_3:57839473-57839492 Msa1297470:intron 30.0%
TTAAGCCTTTGTAAGAAGAA+TGG - chr8_3:57839592-57839611 Msa1297470:intron 30.0%
ACTTATAACAACACAAACTC+AGG + chr8_3:57839851-57839870 None:intergenic 30.0%
!! ATTGGTTTGTGTTCAATGAA+GGG + chr8_3:57839938-57839957 None:intergenic 30.0%
!! AATTGGTTTGTGTTCAATGA+AGG + chr8_3:57839939-57839958 None:intergenic 30.0%
! ATTAAACAAGACTAACTTGC+TGG + chr8_3:57839999-57840018 None:intergenic 30.0%
! TCACCATTATTTTCAGATAG+CGG + chr8_3:57840234-57840253 None:intergenic 30.0%
AAACGTATAAACTGCTTGTT+CGG + chr8_3:57840263-57840282 None:intergenic 30.0%
TGCTGCATATTATTATGAAC+AGG + chr8_3:57840807-57840826 None:intergenic 30.0%
TATTTGTTTGGACTGATTGT+TGG - chr8_3:57840902-57840921 Msa1297470:intron 30.0%
TAGAACGGTCTATAGTATTA+AGG - chr8_3:57840976-57840995 Msa1297470:CDS 30.0%
ATCTCCAAAATGACAGAAAT+CGG + chr8_3:57841116-57841135 None:intergenic 30.0%
AAGTACAACTCTATGCTAAC+TGG + chr8_3:57834769-57834788 None:intergenic 35.0%
!! GATTAGCTTATCTAAGAGTG+AGG - chr8_3:57835647-57835666 Msa1297470:CDS 35.0%
GTTCCAGTGTGATCTATAAA+GGG + chr8_3:57835960-57835979 None:intergenic 35.0%
ATGCAATTGTCACATGCAAA+AGG + chr8_3:57836083-57836102 None:intergenic 35.0%
! TCTAGAGTGATTTAGTTGGT+CGG - chr8_3:57836114-57836133 Msa1297470:intron 35.0%
ACGGCTCTTGTCAAAATTAT+TGG - chr8_3:57836181-57836200 Msa1297470:intron 35.0%
AAAATCAGCTTGTAAAGCGA+GGG - chr8_3:57836249-57836268 Msa1297470:intron 35.0%
TCTCTTTGTAAACTCATCTG+AGG - chr8_3:57836277-57836296 Msa1297470:intron 35.0%
AGGAAATATCACCCCATATT+GGG + chr8_3:57836553-57836572 None:intergenic 35.0%
AAGGAAATATCACCCCATAT+TGG + chr8_3:57836554-57836573 None:intergenic 35.0%
ACCCCTAACTAAAACATCAA+AGG + chr8_3:57836573-57836592 None:intergenic 35.0%
TAGTTAGGGGTAGAAAGTTT+CGG - chr8_3:57836582-57836601 Msa1297470:intron 35.0%
! TTGGTTCACTATTAATGGAC+TGG - chr8_3:57836659-57836678 Msa1297470:intron 35.0%
ACTTCAATGATATTGCTCTG+AGG - chr8_3:57836810-57836829 Msa1297470:intron 35.0%
GCCTTTATTGCGTGTAAAAT+TGG - chr8_3:57837011-57837030 Msa1297470:intron 35.0%
AAAACAAAAAACTGCAGTGC+AGG + chr8_3:57837294-57837313 None:intergenic 35.0%
!!! TGCACTGCAGTTTTTTGTTT+TGG - chr8_3:57837293-57837312 Msa1297470:intron 35.0%
GTATATGGTATAAAACAGGC+AGG - chr8_3:57837345-57837364 Msa1297470:intron 35.0%
!! TCTTTGAAGTTCCTATTAGC+AGG - chr8_3:57837488-57837507 Msa1297470:intron 35.0%
!! CTTTGAAGTTCCTATTAGCA+GGG - chr8_3:57837489-57837508 Msa1297470:intron 35.0%
GTTTGTATTCTTTCTGCCAT+TGG - chr8_3:57837619-57837638 Msa1297470:intron 35.0%
TTTGACATGCATGTTCTTAC+AGG - chr8_3:57837809-57837828 Msa1297470:intron 35.0%
AATTCAAATATTGCCCATGG+CGG - chr8_3:57838142-57838161 Msa1297470:intron 35.0%
AAGTATTATTGTTGGGGATG+TGG + chr8_3:57838368-57838387 None:intergenic 35.0%
GACGGAGAGAGTAATATAAT+AGG - chr8_3:57838891-57838910 Msa1297470:intron 35.0%
TCCAGTGAAAACTAATCTGA+GGG + chr8_3:57838948-57838967 None:intergenic 35.0%
!! ATGGTATTGACTACTTGGAA+TGG - chr8_3:57838977-57838996 Msa1297470:intron 35.0%
!! TATCAATTTAAGGGCGTTCT+AGG + chr8_3:57839123-57839142 None:intergenic 35.0%
TAGAACGCCCTTAAATTGAT+AGG - chr8_3:57839122-57839141 Msa1297470:intron 35.0%
AAACTGAATGACCTTCTACA+TGG - chr8_3:57839145-57839164 Msa1297470:intron 35.0%
AACTGAATGACCTTCTACAT+GGG - chr8_3:57839146-57839165 Msa1297470:intron 35.0%
TAACAATGATCCCATGTAGA+AGG + chr8_3:57839159-57839178 None:intergenic 35.0%
!! AAAAAAAAGCATCTGGACCA+TGG - chr8_3:57839296-57839315 Msa1297470:intron 35.0%
TCATCAACTTATGGTTACCA+TGG + chr8_3:57839316-57839335 None:intergenic 35.0%
ACCGTGAAGATTGAAATGTT+AGG - chr8_3:57839467-57839486 Msa1297470:intron 35.0%
ATCTACAATGCCTGTGATAA+AGG + chr8_3:57839910-57839929 None:intergenic 35.0%
! GAAGGTGTAGGTTACAAAAT+TGG + chr8_3:57839956-57839975 None:intergenic 35.0%
!! TAACTTGCTGGATTTGGAAA+GGG + chr8_3:57839987-57840006 None:intergenic 35.0%
ATAGCGATACGATCTCAAAT+TGG + chr8_3:57840200-57840219 None:intergenic 35.0%
!! TTATTTTCAGATAGCGGCAT+AGG + chr8_3:57840228-57840247 None:intergenic 35.0%
ATGCCGCTATCTGAAAATAA+TGG - chr8_3:57840228-57840247 Msa1297470:intron 35.0%
AGTTTATACGTTTCTGTTGC+AGG - chr8_3:57840270-57840289 Msa1297470:intron 35.0%
GTTTATACGTTTCTGTTGCA+GGG - chr8_3:57840271-57840290 Msa1297470:intron 35.0%
TTTATACGTTTCTGTTGCAG+GGG - chr8_3:57840272-57840291 Msa1297470:intron 35.0%
TGTTATTATGCATGTAGGAC+AGG - chr8_3:57840509-57840528 Msa1297470:intron 35.0%
GAAAAAGTCAAGCTCAAGTA+TGG - chr8_3:57840614-57840633 Msa1297470:intron 35.0%
AAGTTCAACATTTGGGAAGT+TGG + chr8_3:57840663-57840682 None:intergenic 35.0%
ACTTCCCAAATGTTGAACTT+TGG - chr8_3:57840663-57840682 Msa1297470:intron 35.0%
CTTCCCAAATGTTGAACTTT+GGG - chr8_3:57840664-57840683 Msa1297470:intron 35.0%
TTCCCAAATGTTGAACTTTG+GGG - chr8_3:57840665-57840684 Msa1297470:intron 35.0%
! ATCATTTTCTTCAGAGGACT+CGG + chr8_3:57840733-57840752 None:intergenic 35.0%
TTAGCATTATTGTAGAGTCC+AGG + chr8_3:57840780-57840799 None:intergenic 35.0%
GTTAATCCAAAGTCACATCA+CGG + chr8_3:57840867-57840886 None:intergenic 35.0%
! AAGTCTAACTTGCATTGTTG+AGG - chr8_3:57840945-57840964 Msa1297470:CDS 35.0%
GTTGAGGACTGAATTTAGAA+CGG - chr8_3:57840961-57840980 Msa1297470:CDS 35.0%
!! TTACCCGATTTCTGTCATTT+TGG - chr8_3:57841109-57841128 Msa1297470:CDS 35.0%
TCTCCAAAATGACAGAAATC+GGG + chr8_3:57841115-57841134 None:intergenic 35.0%
! GAAACTTGTTTGAAAGCATG+AGG + chr8_3:57841305-57841324 None:intergenic 35.0%
ATTTGGACTACATGGTTCAT+AGG + chr8_3:57841400-57841419 None:intergenic 35.0%
! GAACTATGATTTGGACTACA+TGG + chr8_3:57841408-57841427 None:intergenic 35.0%
TAGTCCAAATCATAGTTCCA+TGG - chr8_3:57841410-57841429 Msa1297470:five_prime_UTR 35.0%
GAAACCATGGAACTATGATT+TGG + chr8_3:57841417-57841436 None:intergenic 35.0%
CACATTCATCATCATCGCAA+TGG - chr8_3:57834884-57834903 Msa1297470:intron 40.0%
ATCATAGTTGGTTGTTGTGG+TGG + chr8_3:57834927-57834946 None:intergenic 40.0%
ACCACAACAACCAACTATGA+TGG - chr8_3:57834926-57834945 Msa1297470:intron 40.0%
ACCATCATAGTTGGTTGTTG+TGG + chr8_3:57834930-57834949 None:intergenic 40.0%
ACAACAACCAACTATGATGG+TGG - chr8_3:57834929-57834948 Msa1297470:intron 40.0%
CAACAACCAACTATGATGGT+GGG - chr8_3:57834930-57834949 Msa1297470:intron 40.0%
TTAGTTGGAGCGTAAGATGT+GGG + chr8_3:57834957-57834976 None:intergenic 40.0%
TGGTAACATTGCTCTTGGTT+TGG - chr8_3:57835172-57835191 Msa1297470:intron 40.0%
ATTCACTCCACACGTAATCT+TGG - chr8_3:57835534-57835553 Msa1297470:CDS 40.0%
GGTTCCAGTGTGATCTATAA+AGG + chr8_3:57835961-57835980 None:intergenic 40.0%
AAGAGCCGTCAACATATGTT+AGG + chr8_3:57836170-57836189 None:intergenic 40.0%
CAAAATCAGCTTGTAAAGCG+AGG - chr8_3:57836248-57836267 Msa1297470:intron 40.0%
AAATCAGCTTGTAAAGCGAG+GGG - chr8_3:57836250-57836269 Msa1297470:intron 40.0%
CTATTCTCTATGTGGGACTT+TGG - chr8_3:57836308-57836327 Msa1297470:intron 40.0%
! CTTGGTGCGTGGATATTAAA+TGG - chr8_3:57836369-57836388 Msa1297470:intron 40.0%
GTGCGTGGATATTAAATGGT+GGG - chr8_3:57836373-57836392 Msa1297470:intron 40.0%
TTTCGTAAGGTTGAGATAGG+CGG + chr8_3:57836445-57836464 None:intergenic 40.0%
CAGTTTCGTAAGGTTGAGAT+AGG + chr8_3:57836448-57836467 None:intergenic 40.0%
ACAAGCAAGTCAGTTTCGTA+AGG + chr8_3:57836458-57836477 None:intergenic 40.0%
!! CTGACTTGCTTGTAAAGTGA+CGG - chr8_3:57836465-57836484 Msa1297470:intron 40.0%
GCCTCATCTCTATTCTACAT+GGG - chr8_3:57836515-57836534 Msa1297470:intron 40.0%
TCCCATGTAGAATAGAGATG+AGG + chr8_3:57836519-57836538 None:intergenic 40.0%
!! TATTAATGGACTGGAGCAGA+AGG - chr8_3:57836668-57836687 Msa1297470:intron 40.0%
AGCAGAAGGATTTGAACTGT+GGG - chr8_3:57836682-57836701 Msa1297470:intron 40.0%
GTATAGAGTTGCACTCAGAA+AGG - chr8_3:57837245-57837264 Msa1297470:intron 40.0%
TGAGAATGGTCTGTAACAAC+TGG + chr8_3:57837527-57837546 None:intergenic 40.0%
! GAGAAGCATACTAGTGAGAA+TGG + chr8_3:57837541-57837560 None:intergenic 40.0%
! AGTATGCTTCTCTTGTTTGC+AGG - chr8_3:57837549-57837568 Msa1297470:intron 40.0%
! AGTTATGGCCTTTTCTCAGA+CGG - chr8_3:57837585-57837604 Msa1297470:intron 40.0%
AGGCAGTATTGCAAGATATG+AGG - chr8_3:57837678-57837697 Msa1297470:intron 40.0%
AATAAAGGGAGGGAGAGAAA+AGG - chr8_3:57838096-57838115 Msa1297470:intron 40.0%
CTTCCAAACACTGTTGTCTA+TGG + chr8_3:57838301-57838320 None:intergenic 40.0%
! CTTTTGCAAAGATCTTGCAG+AGG - chr8_3:57838406-57838425 Msa1297470:intron 40.0%
!! AGTTTGTGTTTTTCGGTGCA+TGG - chr8_3:57838464-57838483 Msa1297470:intron 40.0%
TGAAAGAGGTCCTTTGTGTT+GGG + chr8_3:57838524-57838543 None:intergenic 40.0%
! TGCTTATAATTTGGGACGGA+GGG + chr8_3:57838877-57838896 None:intergenic 40.0%
! TTGCTTATAATTTGGGACGG+AGG + chr8_3:57838876-57838895 None:intergenic 40.0%
CCAGTGAAAACTAATCTGAG+GGG + chr8_3:57838947-57838966 None:intergenic 40.0%
CTCCAGTGAAAACTAATCTG+AGG + chr8_3:57838949-57838968 None:intergenic 40.0%
! TTTCACTGGAGCGTTTAGTA+TGG - chr8_3:57838958-57838977 Msa1297470:intron 40.0%
ATCTGCATTTCCTACACTTC+CGG + chr8_3:57839551-57839570 None:intergenic 40.0%
AGCCTTTGTAAGAAGAATGG+CGG - chr8_3:57839595-57839614 Msa1297470:intron 40.0%
!!! GGTGTCAAGGATTAGCTTTT+GGG - chr8_3:57839616-57839635 Msa1297470:intron 40.0%
!!! TCAAGGATTAGCTTTTGGGA+GGG - chr8_3:57839620-57839639 Msa1297470:intron 40.0%
ATGAAGTATAGACAATGCCC+TGG + chr8_3:57839690-57839709 None:intergenic 40.0%
TGGTTCTCAATTGTGAAGAC+AGG - chr8_3:57839791-57839810 Msa1297470:intron 40.0%
!! CTAACTTGCTGGATTTGGAA+AGG + chr8_3:57839988-57840007 None:intergenic 40.0%
!! CAAGACTAACTTGCTGGATT+TGG + chr8_3:57839993-57840012 None:intergenic 40.0%
! TTTGAGATCGTATCGCTATC+AGG - chr8_3:57840201-57840220 Msa1297470:intron 40.0%
! GTACAGGTATTGTTCTCAAG+TGG - chr8_3:57840351-57840370 Msa1297470:intron 40.0%
!! GGGAGTGTTATTATGCATGT+AGG - chr8_3:57840504-57840523 Msa1297470:intron 40.0%
!! CATTGTGGGTAGCTTTATTG+TGG - chr8_3:57840587-57840606 Msa1297470:intron 40.0%
!! TGGGTAGCTTTATTGTGGAT+CGG - chr8_3:57840592-57840611 Msa1297470:intron 40.0%
AGCTCAAGTATGGTGAAATC+TGG - chr8_3:57840624-57840643 Msa1297470:intron 40.0%
GCTCAAGTATGGTGAAATCT+GGG - chr8_3:57840625-57840644 Msa1297470:intron 40.0%
TGCCCCAAAGTTCAACATTT+GGG + chr8_3:57840670-57840689 None:intergenic 40.0%
AGATGTACCATCATCCACTA+TGG - chr8_3:57840826-57840845 Msa1297470:intron 40.0%
GATGTACCATCATCCACTAT+GGG - chr8_3:57840827-57840846 Msa1297470:intron 40.0%
AAACCTAATTGGGTGAACGA+TGG + chr8_3:57841017-57841036 None:intergenic 40.0%
TAGCATCATTAGAGTCCCTA+CGG + chr8_3:57841069-57841088 None:intergenic 40.0%
! ACTACGCAAAAGAAAGCATG+AGG + chr8_3:57841250-57841269 None:intergenic 40.0%
! TTGATTTTTGCGTGTAGCGA+TGG - chr8_3:57841372-57841391 Msa1297470:five_prime_UTR 40.0%
ACGTTGAGCTGCAATTATCA+TGG + chr8_3:57841455-57841474 None:intergenic 40.0%
ATAGTTGGTTGTTGTGGTGG+TGG + chr8_3:57834924-57834943 None:intergenic 45.0%
GTTAGTTGGAGCGTAAGATG+TGG + chr8_3:57834958-57834977 None:intergenic 45.0%
! CTGATCATGGTGGTGTTAGT+TGG + chr8_3:57834972-57834991 None:intergenic 45.0%
AAAGGAAAACGAGCTGTAGC+GGG + chr8_3:57835047-57835066 None:intergenic 45.0%
GAAAGGAAAACGAGCTGTAG+CGG + chr8_3:57835048-57835067 None:intergenic 45.0%
CCATCATGAGTAACCGAGAA+CGG + chr8_3:57835089-57835108 None:intergenic 45.0%
CCAAGAGCAATGTTACCATC+AGG + chr8_3:57835170-57835189 None:intergenic 45.0%
CCTGATGGTAACATTGCTCT+TGG - chr8_3:57835167-57835186 Msa1297470:intron 45.0%
CTTCCTCTATGTTTCTTGGG+AGG + chr8_3:57835266-57835285 None:intergenic 45.0%
CTCCCAAGAAACATAGAGGA+AGG - chr8_3:57835264-57835283 Msa1297470:intron 45.0%
GGCCTTCCTCTATGTTTCTT+GGG + chr8_3:57835269-57835288 None:intergenic 45.0%
AAGAAGCAGTTAGATGCGCT+TGG - chr8_3:57835302-57835321 Msa1297470:intron 45.0%
AGTTAGATGCGCTTGGTATG+TGG - chr8_3:57835309-57835328 Msa1297470:intron 45.0%
! GCACTGACACTTCTGATTGA+AGG - chr8_3:57835345-57835364 Msa1297470:intron 45.0%
AAATTACCACCTGACGTGTC+TGG - chr8_3:57835403-57835422 Msa1297470:CDS 45.0%
AGGCCCTTTATAGATCACAC+TGG - chr8_3:57835954-57835973 Msa1297470:CDS 45.0%
ATCACACTGGAACCCAAAGT+TGG - chr8_3:57835967-57835986 Msa1297470:CDS 45.0%
GGTGCGTGGATATTAAATGG+TGG - chr8_3:57836372-57836391 Msa1297470:intron 45.0%
! CGTGGATATTAAATGGTGGG+TGG - chr8_3:57836376-57836395 Msa1297470:intron 45.0%
GGCCTCATCTCTATTCTACA+TGG - chr8_3:57836514-57836533 Msa1297470:intron 45.0%
GAGCAGAAGGATTTGAACTG+TGG - chr8_3:57836681-57836700 Msa1297470:intron 45.0%
GCAGAAGGATTTGAACTGTG+GGG - chr8_3:57836683-57836702 Msa1297470:intron 45.0%
GAAGTTCCTATTAGCAGGGT+TGG - chr8_3:57837493-57837512 Msa1297470:intron 45.0%
! GTTATGGCCTTTTCTCAGAC+GGG - chr8_3:57837586-57837605 Msa1297470:intron 45.0%
! TTATGGCCTTTTCTCAGACG+GGG - chr8_3:57837587-57837606 Msa1297470:intron 45.0%
GAAAGAATACAAACCGTGCG+AGG + chr8_3:57837613-57837632 None:intergenic 45.0%
GAGGGAGAGAAAAGGTTCTT+TGG - chr8_3:57838104-57838123 Msa1297470:intron 45.0%
!! ATATTGCCCATGGCGGATAT+CGG - chr8_3:57838149-57838168 Msa1297470:intron 45.0%
! GGATATCGGTGGCGATTTTT+GGG - chr8_3:57838163-57838182 Msa1297470:intron 45.0%
ATGCCCAATTTCGGCTGATA+TGG - chr8_3:57838194-57838213 Msa1297470:intron 45.0%
CTGCCATATCAGCCGAAATT+GGG + chr8_3:57838200-57838219 None:intergenic 45.0%
TCCGCCATGATCTGATATGA+CGG - chr8_3:57838225-57838244 Msa1297470:intron 45.0%
CCAAACACTGTTGTCTATGG+CGG + chr8_3:57838298-57838317 None:intergenic 45.0%
GTGAAAGAGGTCCTTTGTGT+TGG + chr8_3:57838525-57838544 None:intergenic 45.0%
TAATAGGTTATCCCCGCAAG+TGG - chr8_3:57838907-57838926 Msa1297470:intron 45.0%
!!! CCCCTCAGATTAGTTTTCAC+TGG - chr8_3:57838944-57838963 Msa1297470:intron 45.0%
CACCGCCATTCTTCTTACAA+AGG + chr8_3:57839600-57839619 None:intergenic 45.0%
! TAAGAAGAATGGCGGTGTCA+AGG - chr8_3:57839603-57839622 Msa1297470:intron 45.0%
!!! CGGTGTCAAGGATTAGCTTT+TGG - chr8_3:57839615-57839634 Msa1297470:intron 45.0%
!!! GTCAAGGATTAGCTTTTGGG+AGG - chr8_3:57839619-57839638 Msa1297470:intron 45.0%
!! ATTCAAGGCTTTGGGTGAGT+TGG - chr8_3:57839771-57839790 Msa1297470:intron 45.0%
TTGTGAAGACAGGATGACTG+TGG - chr8_3:57839801-57839820 Msa1297470:intron 45.0%
AAGACAGGATGACTGTGGAT+AGG - chr8_3:57839806-57839825 Msa1297470:intron 45.0%
! TGACGTAATTTTGCTCCGCA+GGG - chr8_3:57840174-57840193 Msa1297470:intron 45.0%
GTGCCCCAAAGTTCAACATT+TGG + chr8_3:57840671-57840690 None:intergenic 45.0%
CAACTAGTCCCACTTCTCAA+GGG - chr8_3:57840700-57840719 Msa1297470:CDS 45.0%
!! AGTAATTTTAGCAGGGGACC+TGG - chr8_3:57840759-57840778 Msa1297470:intron 45.0%
AGTCACATCACGGATGAGTT+TGG + chr8_3:57840857-57840876 None:intergenic 45.0%
ACTCATCCGTGATGTGACTT+TGG - chr8_3:57840858-57840877 Msa1297470:intron 45.0%
TGGATTAACAGTGCAGAAGC+AGG - chr8_3:57840878-57840897 Msa1297470:intron 45.0%
GGATTAACAGTGCAGAAGCA+GGG - chr8_3:57840879-57840898 Msa1297470:intron 45.0%
! GCAGAAGCAGGGTATTTGTT+TGG - chr8_3:57840890-57840909 Msa1297470:intron 45.0%
TCTCCATCGTTCACCCAATT+AGG - chr8_3:57841011-57841030 Msa1297470:CDS 45.0%
GACTCTAATGATGCTAGCCA+GGG - chr8_3:57841073-57841092 Msa1297470:CDS 45.0%
! GTAATGCAAGAGCATATCCC+TGG + chr8_3:57841093-57841112 None:intergenic 45.0%
TTATCATGGCAGTGGCGTTT+GGG + chr8_3:57841441-57841460 None:intergenic 45.0%
ATTATCATGGCAGTGGCGTT+TGG + chr8_3:57841442-57841461 None:intergenic 45.0%
AGCTGCAATTATCATGGCAG+TGG + chr8_3:57841449-57841468 None:intergenic 45.0%
! TGGTTGTGGTGGAGGAGTTA+GGG + chr8_3:57834995-57835014 None:intergenic 50.0%
TCCTTTCGCTTCTCCGCAAT+CGG - chr8_3:57835061-57835080 Msa1297470:intron 50.0%
CCGTTCTCGGTTACTCATGA+TGG - chr8_3:57835086-57835105 Msa1297470:CDS 50.0%
!! TTCTTCTTCCCAAGCGTCGA+CGG + chr8_3:57835122-57835141 None:intergenic 50.0%
ACGCTTGGGAAGAAGAAACG+TGG - chr8_3:57835125-57835144 Msa1297470:CDS 50.0%
TTGGGAAGAAGAAACGTGGC+CGG - chr8_3:57835129-57835148 Msa1297470:CDS 50.0%
CCATCAGGCGAGTATTTCCT+CGG + chr8_3:57835155-57835174 None:intergenic 50.0%
GCAGCAACAGGAGAAGAAAC+AGG + chr8_3:57835200-57835219 None:intergenic 50.0%
! ATGTTTCTTGGGAGGCGCAT+CGG + chr8_3:57835258-57835277 None:intergenic 50.0%
CGGCCTTCCTCTATGTTTCT+TGG + chr8_3:57835270-57835289 None:intergenic 50.0%
TGTTTGTTCTGTGAAGGGGC+TGG - chr8_3:57835502-57835521 Msa1297470:CDS 50.0%
CACTCCACACGTAATCTTGG+TGG - chr8_3:57835537-57835556 Msa1297470:CDS 50.0%
GACTCCACCAAGATTACGTG+TGG + chr8_3:57835544-57835563 None:intergenic 50.0%
CACGTAATCTTGGTGGAGTC+TGG - chr8_3:57835544-57835563 Msa1297470:CDS 50.0%
AATCTTGGTGGAGTCTGGTG+AGG - chr8_3:57835549-57835568 Msa1297470:CDS 50.0%
GAAGGATTTGAACTGTGGGG+TGG - chr8_3:57836686-57836705 Msa1297470:intron 50.0%
GGATAGCTTATTACGTGCGC+AGG + chr8_3:57837070-57837089 None:intergenic 50.0%
GCTACACCAACCCTGCTAAT+AGG + chr8_3:57837502-57837521 None:intergenic 50.0%
TACACGGCTGATTGCACCAA+TGG + chr8_3:57837638-57837657 None:intergenic 50.0%
CTGGCTGTCGAAGGATTACA+CGG + chr8_3:57837654-57837673 None:intergenic 50.0%
CTTGCAATACTGCCTGATGC+TGG + chr8_3:57837673-57837692 None:intergenic 50.0%
! CGGATATCGGTGGCGATTTT+TGG - chr8_3:57838162-57838181 Msa1297470:intron 50.0%
ATCAGCCGAAATTGGGCATG+CGG + chr8_3:57838193-57838212 None:intergenic 50.0%
CCTGCCATATCAGCCGAAAT+TGG + chr8_3:57838201-57838220 None:intergenic 50.0%
CCAATTTCGGCTGATATGGC+AGG - chr8_3:57838198-57838217 Msa1297470:intron 50.0%
GCCGTCATATCAGATCATGG+CGG + chr8_3:57838229-57838248 None:intergenic 50.0%
GAGCCAAAATCCCGCAATAC+CGG + chr8_3:57838264-57838283 None:intergenic 50.0%
TTGTCTATGGCGGTCCATTG+CGG + chr8_3:57838288-57838307 None:intergenic 50.0%
CCGCCATAGACAACAGTGTT+TGG - chr8_3:57838295-57838314 Msa1297470:intron 50.0%
!!! GGATTAGCTTTTGGGAGGGT+TGG - chr8_3:57839624-57839643 Msa1297470:intron 50.0%
GGATGACTGTGGATAGGTGT+TGG - chr8_3:57839812-57839831 Msa1297470:intron 50.0%
! TTGGAAAGGGTGCGGAAAGA+AGG + chr8_3:57839974-57839993 None:intergenic 50.0%
TGCTGGATTTGGAAAGGGTG+CGG + chr8_3:57839982-57840001 None:intergenic 50.0%
CTGCGGAGCAAAATTACGTC+AGG + chr8_3:57840175-57840194 None:intergenic 50.0%
! CTGACGTAATTTTGCTCCGC+AGG - chr8_3:57840173-57840192 Msa1297470:intron 50.0%
ACGATCTCAAATTGGCCCTG+CGG + chr8_3:57840192-57840211 None:intergenic 50.0%
AACTGCAGCGTCAACTGTAC+AGG - chr8_3:57840335-57840354 Msa1297470:intron 50.0%
! CCTTGAGAAGTGGGACTAGT+TGG + chr8_3:57840702-57840721 None:intergenic 50.0%
CCAACTAGTCCCACTTCTCA+AGG - chr8_3:57840699-57840718 Msa1297470:CDS 50.0%
GTTGAAGGCCCTTGAGAAGT+GGG + chr8_3:57840711-57840730 None:intergenic 50.0%
! TCTTCAGAGGACTCGGTTGA+AGG + chr8_3:57840726-57840745 None:intergenic 50.0%
TACCATCATCCACTATGGGC+TGG - chr8_3:57840831-57840850 Msa1297470:intron 50.0%
GGACTCTAATGATGCTAGCC+AGG - chr8_3:57841072-57841091 Msa1297470:CDS 50.0%
TGTCTGTCTGTACTCAGCAG+CGG - chr8_3:57841139-57841158 Msa1297470:CDS 50.0%
GTGGGACCCACCATCATAGT+TGG + chr8_3:57834939-57834958 None:intergenic 55.0%
GGAGTTAGGGCTGATCATGG+TGG + chr8_3:57834982-57835001 None:intergenic 55.0%
GGAGGAGTTAGGGCTGATCA+TGG + chr8_3:57834985-57835004 None:intergenic 55.0%
! GTGGTTGTGGTGGAGGAGTT+AGG + chr8_3:57834996-57835015 None:intergenic 55.0%
TGCCATGATGTTCGCGTTCG+CGG + chr8_3:57835024-57835043 None:intergenic 55.0%
TCCGATTGCGGAGAAGCGAA+AGG + chr8_3:57835065-57835084 None:intergenic 55.0%
CTTCTTCTCCGTCGACGCTT+GGG - chr8_3:57835111-57835130 Msa1297470:CDS 55.0%
CCGAGGAAATACTCGCCTGA+TGG - chr8_3:57835152-57835171 Msa1297470:CDS 55.0%
! TGCTGCTACGTCTGCTGCTT+CGG - chr8_3:57835214-57835233 Msa1297470:intron 55.0%
GCGCCTCCCAAGAAACATAG+AGG - chr8_3:57835260-57835279 Msa1297470:intron 55.0%
AAACATAGAGGAAGGCCGCC+TGG - chr8_3:57835272-57835291 Msa1297470:intron 55.0%
AACTGCTTCTTCCCAGAGCC+AGG + chr8_3:57835293-57835312 None:intergenic 55.0%
CTAGAGACACCAGACACGTC+AGG + chr8_3:57835415-57835434 None:intergenic 55.0%
TTGTTCTGTGAAGGGGCTGG+CGG - chr8_3:57835505-57835524 Msa1297470:CDS 55.0%
! ACCAAGCCTGATAGTGCTGG+CGG + chr8_3:57836355-57836374 None:intergenic 55.0%
ATCCTTCGACAGCCAGCATC+AGG - chr8_3:57837658-57837677 Msa1297470:intron 55.0%
GCTCTCCGCATGCCCAATTT+CGG - chr8_3:57838185-57838204 Msa1297470:intron 55.0%
GGCGCCGTCATATCAGATCA+TGG + chr8_3:57838232-57838251 None:intergenic 55.0%
GATATGACGGCGCCACAAAG+CGG - chr8_3:57838238-57838257 Msa1297470:intron 55.0%
!!! GGGATTTTGGCTCTCCGCAA+TGG - chr8_3:57838271-57838290 Msa1297470:intron 55.0%
AGGTTATCCCCGCAAGTGGA+CGG - chr8_3:57838911-57838930 Msa1297470:intron 55.0%
TGTGCAGGGCTCTTGGGATA+GGG + chr8_3:57839528-57839547 None:intergenic 55.0%
TCCTACACTTCCGGTGTGCA+GGG + chr8_3:57839542-57839561 None:intergenic 55.0%
TTCCTACACTTCCGGTGTGC+AGG + chr8_3:57839543-57839562 None:intergenic 55.0%
! AGGGTGCGGAAAGAAGGTGT+AGG + chr8_3:57839968-57839987 None:intergenic 55.0%
GTTTCTGTTGCAGGGGCTGA+TGG - chr8_3:57840279-57840298 Msa1297470:intron 55.0%
!! AGGGGCTGATGGACGAGTTT+TGG - chr8_3:57840290-57840309 Msa1297470:intron 55.0%
!! GGGGCTGATGGACGAGTTTT+GGG - chr8_3:57840291-57840310 Msa1297470:intron 55.0%
!!! GCTGATGGACGAGTTTTGGG+TGG - chr8_3:57840294-57840313 Msa1297470:intron 55.0%
!! GTTTTGGGTGGTGCAGTTGC+TGG - chr8_3:57840306-57840325 Msa1297470:intron 55.0%
! TGGGAAGTTGGCGCTGAAGA+AGG + chr8_3:57840651-57840670 None:intergenic 55.0%
!! GTGGGACTAGTTGGAGTCGT+AGG + chr8_3:57840693-57840712 None:intergenic 55.0%
GGTTGAAGGCCCTTGAGAAG+TGG + chr8_3:57840712-57840731 None:intergenic 55.0%
TGAGTTTGGCCAGCCCATAG+TGG + chr8_3:57840843-57840862 None:intergenic 55.0%
GTGGCGTTTGGGTGAAACCA+TGG + chr8_3:57841430-57841449 None:intergenic 55.0%
!! TTGTGGTGGTGGTGCTGAGC+GGG + chr8_3:57834913-57834932 None:intergenic 60.0%
!! GTTGTGGTGGTGGTGCTGAG+CGG + chr8_3:57834914-57834933 None:intergenic 60.0%
CATGATGTTCGCGTTCGCGG+TGG + chr8_3:57835021-57835040 None:intergenic 60.0%
CACCGCGAACGCGAACATCA+TGG - chr8_3:57835019-57835038 Msa1297470:intron 60.0%
TCCGCAATCGGAGCCGTTCT+CGG - chr8_3:57835073-57835092 Msa1297470:CDS 60.0%
ACCGAGAACGGCTCCGATTG+CGG + chr8_3:57835077-57835096 None:intergenic 60.0%
!! CCAAGCGTCGACGGAGAAGA+AGG + chr8_3:57835113-57835132 None:intergenic 60.0%
CCTTCTTCTCCGTCGACGCT+TGG - chr8_3:57835110-57835129 Msa1297470:CDS 60.0%
CAGGCGAGTATTTCCTCGGC+CGG + chr8_3:57835151-57835170 None:intergenic 60.0%
GCAGCAGACGTAGCAGCAAC+AGG + chr8_3:57835212-57835231 None:intergenic 60.0%
GCTGCTTCGGCTGGTGATTC+TGG - chr8_3:57835227-57835246 Msa1297470:intron 60.0%
TGCTTCTTCCCAGAGCCAGG+CGG + chr8_3:57835290-57835309 None:intergenic 60.0%
GAGACACCAGACACGTCAGG+TGG + chr8_3:57835412-57835431 None:intergenic 60.0%
! TGTTCTGTGAAGGGGCTGGC+GGG - chr8_3:57835506-57835525 Msa1297470:CDS 60.0%
!! CTGATAGTGCTGGCGGTGAG+GGG + chr8_3:57836348-57836367 None:intergenic 60.0%
!! CCTGATAGTGCTGGCGGTGA+GGG + chr8_3:57836349-57836368 None:intergenic 60.0%
ACCGCCAGCACTATCAGGCT+TGG - chr8_3:57836351-57836370 Msa1297470:intron 60.0%
! CGCACCAAGCCTGATAGTGC+TGG + chr8_3:57836358-57836377 None:intergenic 60.0%
!! GCACTATCAGGCTTGGTGCG+TGG - chr8_3:57836358-57836377 Msa1297470:intron 60.0%
! TGCCTGATGCTGGCTGTCGA+AGG + chr8_3:57837663-57837682 None:intergenic 60.0%
!! TTGCCCATGGCGGATATCGG+TGG - chr8_3:57838152-57838171 Msa1297470:intron 60.0%
TCGCCACCGATATCCGCCAT+GGG + chr8_3:57838158-57838177 None:intergenic 60.0%
ATCGCCACCGATATCCGCCA+TGG + chr8_3:57838159-57838178 None:intergenic 60.0%
CCACAAAGCGGCCGGTATTG+CGG - chr8_3:57838250-57838269 Msa1297470:intron 60.0%
CACAAAGCGGCCGGTATTGC+GGG - chr8_3:57838251-57838270 Msa1297470:intron 60.0%
! CGGCCGGTATTGCGGGATTT+TGG - chr8_3:57838258-57838277 Msa1297470:intron 60.0%
TTATCCCCGCAAGTGGACGG+TGG - chr8_3:57838914-57838933 Msa1297470:intron 60.0%
TATCCCCGCAAGTGGACGGT+GGG - chr8_3:57838915-57838934 Msa1297470:intron 60.0%
AATCCCACCGTCCACTTGCG+GGG + chr8_3:57838921-57838940 None:intergenic 60.0%
CAATCCCACCGTCCACTTGC+GGG + chr8_3:57838922-57838941 None:intergenic 60.0%
CCAATCCCACCGTCCACTTG+CGG + chr8_3:57838923-57838942 None:intergenic 60.0%
GTGTGCAGGGCTCTTGGGAT+AGG + chr8_3:57839529-57839548 None:intergenic 60.0%
ATCCCAAGAGCCCTGCACAC+CGG - chr8_3:57839529-57839548 Msa1297470:intron 60.0%
TTCCGGTGTGCAGGGCTCTT+GGG + chr8_3:57839534-57839553 None:intergenic 60.0%
!! GGCCAGCCCATAGTGGATGA+TGG + chr8_3:57840836-57840855 None:intergenic 60.0%
!! GGTGGTGGTGGTTGTGGTGG+AGG + chr8_3:57835003-57835022 None:intergenic 65.0%
!! GTTCGCGGTGGTGGTGGTTG+TGG + chr8_3:57835009-57835028 None:intergenic 65.0%
GATGTTCGCGTTCGCGGTGG+TGG + chr8_3:57835018-57835037 None:intergenic 65.0%
AGAAGAAACGTGGCCGGCCG+AGG - chr8_3:57835135-57835154 Msa1297470:CDS 65.0%
! GCTACGTCTGCTGCTTCGGC+TGG - chr8_3:57835218-57835237 Msa1297470:intron 65.0%
CCCTCACCGCCAGCACTATC+AGG - chr8_3:57836346-57836365 Msa1297470:intron 65.0%
!! GCCTGATAGTGCTGGCGGTG+AGG + chr8_3:57836350-57836369 None:intergenic 65.0%
GCGAGGCCCCGTCTGAGAAA+AGG + chr8_3:57837596-57837615 None:intergenic 65.0%
TTCTCAGACGGGGCCTCGCA+CGG - chr8_3:57837597-57837616 Msa1297470:intron 65.0%
! CCGCAATACCGGCCGCTTTG+TGG + chr8_3:57838253-57838272 None:intergenic 65.0%
CCGCAAGTGGACGGTGGGAT+TGG - chr8_3:57838920-57838939 Msa1297470:intron 65.0%
CTTCCGGTGTGCAGGGCTCT+TGG + chr8_3:57839535-57839554 None:intergenic 65.0%
! GCCCTGCACACCGGAAGTGT+AGG - chr8_3:57839538-57839557 Msa1297470:intron 65.0%
!! CGCGGTGGTGGTGGTTGTGG+TGG + chr8_3:57835006-57835025 None:intergenic 70.0%
! GTTCGCGTTCGCGGTGGTGG+TGG + chr8_3:57835015-57835034 None:intergenic 70.0%
AGAGGAAGGCCGCCTGGCTC+TGG - chr8_3:57835278-57835297 Msa1297470:intron 70.0%
! GAGGAAGGCCGCCTGGCTCT+GGG - chr8_3:57835279-57835298 Msa1297470:intron 70.0%
! TGTGAAGGGGCTGGCGGGAC+TGG - chr8_3:57835511-57835530 Msa1297470:CDS 70.0%
! GCTGGCGGTGAGGGGTGTAC+TGG + chr8_3:57836340-57836359 None:intergenic 70.0%
TGACGGCGCCACAAAGCGGC+CGG - chr8_3:57838242-57838261 Msa1297470:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 57834766 57841491 57834766 ID=Msa1297470;Name=Msa1297470
chr8_3 mRNA 57834766 57841491 57834766 ID=Msa1297470-mRNA-1;Parent=Msa1297470;Name=Msa1297470-mRNA-1;_AED=0.15;_eAED=0.15;_QI=137|0.66|0.57|0.85|1|1|7|0|422
chr8_3 exon 57834766 57834868 57834766 ID=Msa1297470-mRNA-1:exon:16577;Parent=Msa1297470-mRNA-1
chr8_3 exon 57835066 57835185 57835066 ID=Msa1297470-mRNA-1:exon:16576;Parent=Msa1297470-mRNA-1
chr8_3 exon 57835392 57835672 57835392 ID=Msa1297470-mRNA-1:exon:16575;Parent=Msa1297470-mRNA-1
chr8_3 exon 57835901 57836062 57835901 ID=Msa1297470-mRNA-1:exon:16574;Parent=Msa1297470-mRNA-1
chr8_3 exon 57838558 57838686 57838558 ID=Msa1297470-mRNA-1:exon:16573;Parent=Msa1297470-mRNA-1
chr8_3 exon 57840687 57840739 57840687 ID=Msa1297470-mRNA-1:exon:16572;Parent=Msa1297470-mRNA-1
chr8_3 exon 57840934 57841491 57840934 ID=Msa1297470-mRNA-1:exon:16571;Parent=Msa1297470-mRNA-1
chr8_3 five_prime_UTR 57841355 57841491 57841355 ID=Msa1297470-mRNA-1:five_prime_utr;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57840934 57841354 57840934 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57840687 57840739 57840687 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57838558 57838686 57838558 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57835901 57836062 57835901 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57835392 57835672 57835392 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57835066 57835185 57835066 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
chr8_3 CDS 57834766 57834868 57834766 ID=Msa1297470-mRNA-1:cds;Parent=Msa1297470-mRNA-1
Gene Sequence

>Msa1297470

ATGGATTCCCGCTCAGCACCACCACCACAACAACCAACTATGATGGTGGGTCCCACATCTTACGCTCCAACTAACACCACCATGATCAGCCCTAACTCCTCCACCACAACCACCACCACCGCGAACGCGAACATCATGGCACCCGCTACAGCTCGTTTTCCTTTCGCTTCTCCGCAATCGGAGCCGTTCTCGGTTACTCATGATGGTCCTTCTTCTCCGTCGACGCTTGGGAAGAAGAAACGTGGCCGGCCGAGGAAATACTCGCCTGATGGTAACATTGCTCTTGGTTTGGCTCCTGTTTCTTCTCCTGTTGCTGCTACGTCTGCTGCTTCGGCTGGTGATTCTGGAAACGCCGATGCGCCTCCCAAGAAACATAGAGGAAGGCCGCCTGGCTCTGGGAAGAAGCAGTTAGATGCGCTTGGGGCTGGCGGGACTGGATTCACTCCACACGTAATCTTGGTGGAGTCTGGTGAGGACATTACAGAAAAAGTTATGGCCTTTTCTCAGACGGGGCCTCGCACGGTTTGTATTCTTTCTGCCATTGGTGCAATCAGCCGTGTAATCCTTCGACAGCCAGCATCAGGCAGTATTGCAAGATATGAGGGCCAATTTGAGATCGTATCGCTATCAGGTCCTATGCCGCTATCTGAAAATAATGGTGAACAAAGCCGAACAAGCAGTTTATACGTTTCTGTTGCAGGGGCTGATGGACGAGTTTTGGGTGGTGCAGTTGCTGGCGAGTTAACTGCAGCGTCAACTGTACAGGTCATTGTGGGTAGCTTTATTGTGGATCGGAAAAAGTCAAGCTCAAGTATGGTGAAATCTGGGCCTTCTTCAGCGCCAACTTCCCAAATGTTGAACTTTGGGGCACCTACGACTCCAACTAGTCCCACTTCTCAAGGGCCTTCAACCGAGTCCTCTGAAGAAAATGATCATAATAGTAATTTTAGCAGGGGACCTGGACTCTACAATAATGCTAATCAGCCTGTTCATAATAATATGCAGCAGATGTACCATCATCCACTATGGGCTGGCCAAACTCATCCGGACTCTAATGATGCTAGCCAGGGATATGCTCTTGCATTACCCGATTTCTGTCATTTTGGAGATTGCTGTCTGTCTGTACTCAGCAGCGGCATAGCAAAATCAGATATGTGCTTTTACACCGATGGAGCCTATGAACCATGTAGTCCAAATCATAGTTCCATGGTTTCACCCAAACGCCACTGCCATGATAATTGCAGCTCAACGTCTGCTCTTCCAAATTAG
Protein sequence

>Msa1297470

MDSRSAPPPQQPTMMVGPTSYAPTNTTMISPNSSTTTTTTANANIMAPATARFPFASPQSEPFSVTHDGPSSPSTLGKKKRGRPRKYSPDGNIALGLAPVSSPVAATSAASAGDSGNADAPPKKHRGRPPGSGKKQLDALGAGGTGFTPHVILVESGEDITEKVMAFSQTGPRTVCILSAIGAISRVILRQPASGSIARYEGQFEIVSLSGPMPLSENNGEQSRTSSLYVSVAGADGRVLGGAVAGELTAASTVQVIVGSFIVDRKKSSSSMVKSGPSSAPTSQMLNFGAPTTPTSPTSQGPSTESSEENDHNSNFSRGPGLYNNANQPVHNNMQQMYHHPLWAGQTHPDSNDASQGYALALPDFCHFGDCCLSVLSSGIAKSDMCFYTDGAYEPCSPNHSSMVSPKRHCHDNCSSTSALPN*