Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297570 | XP_003608623.4 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297570 | sp|O82162|EYA_ARATH | 59.727 | 293 | 110 | 1 | 24 | 316 | 19 | 303 | 8.78e-133 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297570 | I3S9D7 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1250510 | Msa1297570 | 0.953483 | 2.482151e-111 | -8.615850e-47 |
| Msa1297510 | Msa1297570 | 0.971306 | 5.893853e-133 | -8.615850e-47 |
| Msa1297570 | Msa1426890 | 0.955503 | 2.608359e-113 | -8.615850e-47 |
| Msa1297570 | Msa1435240 | 0.958264 | 3.619420e-116 | -8.615850e-47 |
| Msa1297570 | Msa1440200 | 0.809692 | 1.668569e-50 | -8.615850e-47 |
| Msa0934850 | Msa1297570 | 0.834721 | 2.544308e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297570 | MtrunA17_Chr4g0054711 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297570 | AT2G35320.1 | 59.727 | 293 | 110 | 1 | 24 | 316 | 19 | 303 | 8.93e-134 | 382 |
Find 97 sgRNAs with CRISPR-Local
Find 368 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGCTGGATGTTTATATT+TGG | 0.134573 | 8_3:-57986805 | Msa1297570:CDS |
| GTCCTTCCCATCATCATATT+TGG | 0.167846 | 8_3:+57986498 | None:intergenic |
| GAAATAGTGGCCAACTGTTT+TGG | 0.272876 | 8_3:+57981962 | None:intergenic |
| AGTGGAATGGCGGTTGCATC+TGG | 0.283682 | 8_3:-57986875 | Msa1297570:exon |
| GTAAGGAGTTGAGCAGTATA+AGG | 0.313569 | 8_3:+57986768 | None:intergenic |
| CAGGCTGGATGTTTATATTT+GGG | 0.326293 | 8_3:-57986804 | Msa1297570:CDS |
| TCTTCGTCATTGTCATTGTT+TGG | 0.328913 | 8_3:+57981927 | None:intergenic |
| GACTTCAACCAAGATGAATT+AGG | 0.355911 | 8_3:-57986463 | Msa1297570:CDS |
| ATCAGGAGACAATAAAAGTA+TGG | 0.360230 | 8_3:-57982689 | Msa1297570:CDS |
| AAAATGCTTGCTCTTTCATC+TGG | 0.365350 | 8_3:-57982381 | Msa1297570:CDS |
| GCCTGTTTGACGGAGTGTTC+TGG | 0.403472 | 8_3:-57982524 | Msa1297570:CDS |
| TGCAGCTAAATGAACGATAA+AGG | 0.408332 | 8_3:+57981576 | None:intergenic |
| TGGCGGTTGCATCTGGGATG+AGG | 0.421814 | 8_3:-57986868 | Msa1297570:CDS |
| TCGTTCATTTAGCTGCAGTC+TGG | 0.423021 | 8_3:-57981570 | Msa1297570:three_prime_UTR |
| GTTAGTTAGTTACCTTGCTT+AGG | 0.429764 | 8_3:+57987471 | None:intergenic |
| TATACACATGGCAACACAAT+TGG | 0.430793 | 8_3:+57981818 | None:intergenic |
| ACAAAAGAAAACTTGCATAT+AGG | 0.431167 | 8_3:-57986420 | Msa1297570:CDS |
| TGCAGAAAGGTGTCGAGCTT+GGG | 0.436778 | 8_3:-57986703 | Msa1297570:CDS |
| GTTAAAATTGACCCGCGACC+AGG | 0.438397 | 8_3:-57982014 | Msa1297570:CDS |
| TTGGACAGAACATCAAGAAA+TGG | 0.442699 | 8_3:+57986517 | None:intergenic |
| ACCAGAACACTCCGTCAAAC+AGG | 0.443403 | 8_3:+57982523 | None:intergenic |
| TATATATATGAACCTTATCT+TGG | 0.449587 | 8_3:-57981620 | Msa1297570:three_prime_UTR |
| TCATTTCAGTGTATAGCTCC+TGG | 0.451230 | 8_3:-57982163 | Msa1297570:intron |
| TTCAGCACGGGCCTGTTTGA+CGG | 0.451891 | 8_3:-57982534 | Msa1297570:intron |
| CTGATGAATATACCGACAAA+TGG | 0.459678 | 8_3:-57982647 | Msa1297570:CDS |
| GCCACAACTTAGATGTTAAC+GGG | 0.461271 | 8_3:-57981774 | Msa1297570:three_prime_UTR |
| AACAGACAGGATCACGGAAA+AGG | 0.467858 | 8_3:+57981879 | None:intergenic |
| TGCCACAACTTAGATGTTAA+CGG | 0.467936 | 8_3:-57981775 | Msa1297570:three_prime_UTR |
| TCAATGTTTCCGATGGATCA+AGG | 0.468622 | 8_3:-57982126 | Msa1297570:CDS |
| ATCACACAAAAGCGAACGTT+GGG | 0.471747 | 8_3:+57982089 | None:intergenic |
| GTGCAGAAAGGTGTCGAGCT+TGG | 0.477963 | 8_3:-57986704 | Msa1297570:CDS |
| TAAGGAGTTGAGCAGTATAA+GGG | 0.478805 | 8_3:+57986769 | None:intergenic |
| GATATACCACAGAGAAATAG+TGG | 0.480780 | 8_3:+57981949 | None:intergenic |
| ACCTGATGAAAGCCATTTGT+CGG | 0.482110 | 8_3:+57982635 | None:intergenic |
| AGTGTATAGCTCCTGGGAAG+TGG | 0.483068 | 8_3:-57982156 | Msa1297570:CDS |
| GCAGGGCACAGCTAGGTTAG+TGG | 0.485399 | 8_3:-57986893 | Msa1297570:intron |
| ACCGACAAATGGCTTTCATC+AGG | 0.486588 | 8_3:-57982636 | Msa1297570:intron |
| GTGGAGGGCCTAATTCATCT+TGG | 0.487188 | 8_3:+57986455 | None:intergenic |
| AGTTAGTTACCTTGCTTAGG+TGG | 0.492131 | 8_3:+57987474 | None:intergenic |
| AGCTTAATAACACATGGAAA+TGG | 0.499983 | 8_3:-57982356 | Msa1297570:intron |
| CCAAATATAAACATCCAGCC+TGG | 0.501450 | 8_3:+57986805 | None:intergenic |
| ACAGACAGGATCACGGAAAA+GGG | 0.508964 | 8_3:+57981880 | None:intergenic |
| GGCGGTTGCATCTGGGATGA+GGG | 0.510055 | 8_3:-57986867 | Msa1297570:CDS |
| GTGTATAGCTCCTGGGAAGT+GGG | 0.525965 | 8_3:-57982155 | Msa1297570:CDS |
| TGTTGGCATCATCATGTGGA+GGG | 0.526573 | 8_3:+57986440 | None:intergenic |
| GGAAAATTCAATGTTTCCGA+TGG | 0.526933 | 8_3:-57982133 | Msa1297570:CDS |
| GTTCTGTCCAAATATGATGA+TGG | 0.527183 | 8_3:-57986505 | Msa1297570:CDS |
| CGCGACCAGGAAAATCTCAT+AGG | 0.528352 | 8_3:-57982001 | Msa1297570:CDS |
| TTGTGTGATTGGAGATGGAT+GGG | 0.529397 | 8_3:-57982075 | Msa1297570:CDS |
| GGATGAGGGCGGATGAAACA+CGG | 0.531138 | 8_3:-57986853 | Msa1297570:CDS |
| GGTTGAAGTCATAATCAGAT+AGG | 0.531324 | 8_3:+57986476 | None:intergenic |
| CCTGGGATGGATGTTGTCAC+TGG | 0.532753 | 8_3:+57986823 | None:intergenic |
| GGAAAATCTCATAGGTTCCC+TGG | 0.533790 | 8_3:-57981993 | Msa1297570:CDS |
| TTGTTGGCATCATCATGTGG+AGG | 0.540277 | 8_3:+57986439 | None:intergenic |
| AAGCTGCAGAAATCATGAAA+TGG | 0.540685 | 8_3:-57982043 | Msa1297570:CDS |
| GTGGAATGGCGGTTGCATCT+GGG | 0.541648 | 8_3:-57986874 | Msa1297570:exon |
| TGAAACGCTCCTTGATCCAT+CGG | 0.542051 | 8_3:+57982117 | None:intergenic |
| AGTTGAGTCTGTGCTTGTGT+TGG | 0.545298 | 8_3:+57982466 | None:intergenic |
| GTGTCGAGCTTGGGAAGACG+TGG | 0.551286 | 8_3:-57986694 | Msa1297570:CDS |
| TTTCAGACCGTTGAAAGCCT+CGG | 0.551738 | 8_3:+57986730 | None:intergenic |
| CATTTCAGTGTATAGCTCCT+GGG | 0.553970 | 8_3:-57982162 | Msa1297570:intron |
| TGACAACATCCATCCCAGGC+TGG | 0.557450 | 8_3:-57986819 | Msa1297570:CDS |
| CTGGACAGCTTAATAACACA+TGG | 0.559956 | 8_3:-57982362 | Msa1297570:CDS |
| GGATGTTTATATTTGGGACA+TGG | 0.560493 | 8_3:-57986798 | Msa1297570:CDS |
| ATTTAGAAGTAGATGTGGAC+GGG | 0.563466 | 8_3:-57981697 | Msa1297570:three_prime_UTR |
| TATAAACATCCAGCCTGGGA+TGG | 0.563931 | 8_3:+57986810 | None:intergenic |
| GGCATAAGATGATTTCAGTA+AGG | 0.564789 | 8_3:+57986751 | None:intergenic |
| TTTGTGTGATTGGAGATGGA+TGG | 0.565338 | 8_3:-57982076 | Msa1297570:CDS |
| ATGAGCTGGTGACCAAGATA+AGG | 0.570199 | 8_3:+57981608 | None:intergenic |
| CACAAATTTAGAAGTAGATG+TGG | 0.570200 | 8_3:-57981702 | Msa1297570:three_prime_UTR |
| GGCCTCACATCCAAAACAGT+TGG | 0.572986 | 8_3:-57981972 | Msa1297570:CDS |
| TTCTGTCCAAATATGATGAT+GGG | 0.586519 | 8_3:-57986504 | Msa1297570:CDS |
| CAAATATAAACATCCAGCCT+GGG | 0.588832 | 8_3:+57986806 | None:intergenic |
| ACCCGTTAACATCTAAGTTG+TGG | 0.593787 | 8_3:+57981773 | None:intergenic |
| CACAAAAGCGAACGTTGGGA+TGG | 0.594094 | 8_3:+57982093 | None:intergenic |
| GGTTGCATCTGGGATGAGGG+CGG | 0.595621 | 8_3:-57986864 | Msa1297570:CDS |
| GATGAGGGCGGATGAAACAC+GGG | 0.597702 | 8_3:-57986852 | Msa1297570:CDS |
| GTCCAAATATGATGATGGGA+AGG | 0.598075 | 8_3:-57986500 | Msa1297570:CDS |
| CCAGTGACAACATCCATCCC+AGG | 0.601396 | 8_3:-57986823 | Msa1297570:CDS |
| TCTTATGCCGAGGCTTTCAA+CGG | 0.606610 | 8_3:-57986737 | Msa1297570:CDS |
| TGTATAGCTCCTGGGAAGTG+GGG | 0.615041 | 8_3:-57982154 | Msa1297570:CDS |
| AAAGGTGAGATATGATGAGC+TGG | 0.618326 | 8_3:+57981594 | None:intergenic |
| TATATATTGATGCCATGTGA+TGG | 0.618870 | 8_3:-57981799 | Msa1297570:three_prime_UTR |
| GCACAGCTAGGTTAGTGGAA+TGG | 0.619207 | 8_3:-57986888 | Msa1297570:exon |
| AATCACACAAAAGCGAACGT+TGG | 0.620019 | 8_3:+57982088 | None:intergenic |
| TTGGGCAACAGACAGGATCA+CGG | 0.620213 | 8_3:+57981873 | None:intergenic |
| ACTGAAATCATCTTATGCCG+AGG | 0.622489 | 8_3:-57986747 | Msa1297570:CDS |
| AATTTAGAAGTAGATGTGGA+CGG | 0.624181 | 8_3:-57981698 | Msa1297570:three_prime_UTR |
| AAGTTGTGGCAGCCATCACA+TGG | 0.624650 | 8_3:+57981787 | None:intergenic |
| GGTCTGAAAGATGTGCAGAA+AGG | 0.625906 | 8_3:-57986716 | Msa1297570:CDS |
| TTCTGGTGAAAATAAAGACG+TGG | 0.641960 | 8_3:-57982507 | Msa1297570:CDS |
| CAGCTAGGTTAGTGGAATGG+CGG | 0.653323 | 8_3:-57986885 | Msa1297570:exon |
| TCTCTGCAACCACCTAAGCA+AGG | 0.661296 | 8_3:-57987483 | Msa1297570:intron |
| CATCTTATATACATGAGCAG+AGG | 0.677676 | 8_3:+57981654 | None:intergenic |
| AGTTGGCCACTATTTCTCTG+TGG | 0.681956 | 8_3:-57981955 | Msa1297570:CDS |
| TGTCGAGCTTGGGAAGACGT+GGG | 0.694651 | 8_3:-57986693 | Msa1297570:CDS |
| ATGGCATCAATATATACACA+TGG | 0.727755 | 8_3:+57981806 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAATAAAAAATT+GGG | + | chr8_3:57985039-57985058 | None:intergenic | 0.0% |
| !! | TTAAAAAAAAAATAAAAAAT+TGG | + | chr8_3:57985040-57985059 | None:intergenic | 0.0% |
| !!! | AAACTTATATTTTTAAACAA+GGG | + | chr8_3:57983125-57983144 | None:intergenic | 10.0% |
| !!! | AAATTTTGTATTTATTTCTA+TGG | - | chr8_3:57983568-57983587 | Msa1297570:intron | 10.0% |
| !!! | TCTTTATTTTCTAATATAAT+TGG | + | chr8_3:57985136-57985155 | None:intergenic | 10.0% |
| !! | ATTATATTAGAAAATAAAGA+AGG | - | chr8_3:57985136-57985155 | Msa1297570:intron | 10.0% |
| !!! | ATTATGATTATTGATTCAAA+TGG | + | chr8_3:57983018-57983037 | None:intergenic | 15.0% |
| !!! | GAAACTTATATTTTTAAACA+AGG | + | chr8_3:57983126-57983145 | None:intergenic | 15.0% |
| !!! | TTTCTAAAACATGATATTTT+TGG | - | chr8_3:57983142-57983161 | Msa1297570:intron | 15.0% |
| !!! | TTTTTACTTATCTATTATAC+TGG | - | chr8_3:57983203-57983222 | Msa1297570:intron | 15.0% |
| !!! | TATTTTCTAATATAATTGGA+AGG | + | chr8_3:57985132-57985151 | None:intergenic | 15.0% |
| !!! | ATTTGAAACAATTATGATAT+TGG | - | chr8_3:57985890-57985909 | Msa1297570:intron | 15.0% |
| !!! | TTTACATAATATTTTAGATC+AGG | - | chr8_3:57986364-57986383 | Msa1297570:intron | 15.0% |
| !! | TAAATATAACTAATACATAC+AGG | + | chr8_3:57986501-57986520 | None:intergenic | 15.0% |
| !! | AACTAGTAATCATATTATAT+TGG | - | chr8_3:57986822-57986841 | Msa1297570:CDS | 15.0% |
| !! | ACTAGTAATCATATTATATT+GGG | - | chr8_3:57986823-57986842 | Msa1297570:CDS | 15.0% |
| !! | AGTTAAAGCAAGATATAATT+AGG | + | chr8_3:57981896-57981915 | None:intergenic | 20.0% |
| !! | ATAATGATGTCAATATTGAA+TGG | - | chr8_3:57982104-57982123 | Msa1297570:CDS | 20.0% |
| !! | CATAAAAGGAAACAATTATA+TGG | + | chr8_3:57983101-57983120 | None:intergenic | 20.0% |
| !!! | ATGATATTTTTGGTTTTACA+AGG | - | chr8_3:57983152-57983171 | Msa1297570:intron | 20.0% |
| !! | ACCATAATGTAATGTATATA+TGG | - | chr8_3:57983242-57983261 | Msa1297570:intron | 20.0% |
| !! | AAAAATAAACAAGTTATGAC+AGG | + | chr8_3:57983486-57983505 | None:intergenic | 20.0% |
| !!! | TATTTTTAGTATGTGATGAA+TGG | - | chr8_3:57983499-57983518 | Msa1297570:intron | 20.0% |
| !! | AATATACTAAGACAACATAT+AGG | + | chr8_3:57983608-57983627 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAACAGGATTCTA+TGG | + | chr8_3:57984112-57984131 | None:intergenic | 20.0% |
| !! | GAATCCTGTTAAAAAAATAA+CGG | - | chr8_3:57984114-57984133 | Msa1297570:intron | 20.0% |
| !! | AACATTACCTTAAAAAGTAA+AGG | - | chr8_3:57984707-57984726 | Msa1297570:intron | 20.0% |
| !! | ACATTACCTTAAAAAGTAAA+GGG | - | chr8_3:57984708-57984727 | Msa1297570:intron | 20.0% |
| !!! | AAAAGATTTTTTTTAACCTC+CGG | + | chr8_3:57984993-57985012 | None:intergenic | 20.0% |
| !!! | ATGATTATTGACTTCATAAA+AGG | + | chr8_3:57985076-57985095 | None:intergenic | 20.0% |
| !! | TAATGAAGATAAACAGATAT+TGG | + | chr8_3:57985182-57985201 | None:intergenic | 20.0% |
| !! | GTATCAGTATGAATAAAAAA+AGG | - | chr8_3:57985231-57985250 | Msa1297570:intron | 20.0% |
| !! | GGAATAATTATTGTTCAAAT+TGG | - | chr8_3:57985252-57985271 | Msa1297570:intron | 20.0% |
| !!! | AAGCACACTTTTTATTTTAA+GGG | + | chr8_3:57985664-57985683 | None:intergenic | 20.0% |
| !!! | TAAGCACACTTTTTATTTTA+AGG | + | chr8_3:57985665-57985684 | None:intergenic | 20.0% |
| !!! | GAATAAAAAGCACTAATTAA+TGG | - | chr8_3:57985865-57985884 | Msa1297570:intron | 20.0% |
| !! | ACTTACTATAAAAGCTTATT+AGG | + | chr8_3:57986161-57986180 | None:intergenic | 20.0% |
| !! | TTAAATGAAGTAAACTTGTA+TGG | + | chr8_3:57986309-57986328 | None:intergenic | 20.0% |
| !! | ATACAAGTTTACTTCATTTA+AGG | - | chr8_3:57986308-57986327 | Msa1297570:intron | 20.0% |
| !!! | TTGTTTTATATATTTCAGCA+CGG | - | chr8_3:57986523-57986542 | Msa1297570:CDS | 20.0% |
| !!! | ATATGATTACTAGTTTTGAA+TGG | + | chr8_3:57986817-57986836 | None:intergenic | 20.0% |
| !! | CTAGTAATCATATTATATTG+GGG | - | chr8_3:57986824-57986843 | Msa1297570:CDS | 20.0% |
| !!! | TGAACTATTTTTATATGACA+TGG | - | chr8_3:57987336-57987355 | Msa1297570:intron | 20.0% |
| !! | TATATATATGAACCTTATCT+TGG | - | chr8_3:57987450-57987469 | Msa1297570:intron | 20.0% |
| ! | AAAAGTTGAAAATCACGATA+TGG | + | chr8_3:57981662-57981681 | None:intergenic | 25.0% |
| ! | CAGTTGAAAGAATAATTCAA+CGG | + | chr8_3:57981799-57981818 | None:intergenic | 25.0% |
| ! | TTGAATTATTCTTTCAACTG+AGG | - | chr8_3:57981799-57981818 | Msa1297570:three_prime_UTR | 25.0% |
| !!! | ATTATAGTTTTTTAGCTCAG+CGG | - | chr8_3:57982033-57982052 | Msa1297570:CDS | 25.0% |
| ! | TCAATATTGACATCATTATC+CGG | + | chr8_3:57982103-57982122 | None:intergenic | 25.0% |
| !! | TCTTGTTCAAATATTTTCCA+TGG | - | chr8_3:57982461-57982480 | Msa1297570:CDS | 25.0% |
| !! | ATATGCAAGTTTTCTTTTGT+TGG | + | chr8_3:57982650-57982669 | None:intergenic | 25.0% |
| ! | ACAAAAGAAAACTTGCATAT+AGG | - | chr8_3:57982650-57982669 | Msa1297570:CDS | 25.0% |
| ! | ATAAATGAATCAATTTCAGG+AGG | + | chr8_3:57982814-57982833 | None:intergenic | 25.0% |
| ! | CAGATAAATGAATCAATTTC+AGG | + | chr8_3:57982817-57982836 | None:intergenic | 25.0% |
| ! | AATGAACGAAATGTATAAAG+GGG | + | chr8_3:57982995-57983014 | None:intergenic | 25.0% |
| ! | GAATGAACGAAATGTATAAA+GGG | + | chr8_3:57982996-57983015 | None:intergenic | 25.0% |
| !! | TTTTAAACAAGGGTCATAAA+AGG | + | chr8_3:57983115-57983134 | None:intergenic | 25.0% |
| !! | ATTATGGTTTTCTAGATAGT+AGG | + | chr8_3:57983230-57983249 | None:intergenic | 25.0% |
| ! | GCCATATATACATTACATTA+TGG | + | chr8_3:57983246-57983265 | None:intergenic | 25.0% |
| ! | TAATGTATATATGGCTGAAA+TGG | - | chr8_3:57983251-57983270 | Msa1297570:intron | 25.0% |
| ! | CAGCTATCTAAATTAAGATT+AGG | + | chr8_3:57983385-57983404 | None:intergenic | 25.0% |
| !!! | CATGTTTTAGGTAAAATGAA+GGG | + | chr8_3:57983690-57983709 | None:intergenic | 25.0% |
| !!! | TCATGTTTTAGGTAAAATGA+AGG | + | chr8_3:57983691-57983710 | None:intergenic | 25.0% |
| !! | TGTCAACATTTTCATGTTTT+AGG | + | chr8_3:57983702-57983721 | None:intergenic | 25.0% |
| ! | CCTTTACTATATCTTCAATA+TGG | + | chr8_3:57983805-57983824 | None:intergenic | 25.0% |
| ! | CCATATTGAAGATATAGTAA+AGG | - | chr8_3:57983802-57983821 | Msa1297570:intron | 25.0% |
| !!! | TGTTCCGTTATTTTTTTAAC+AGG | + | chr8_3:57984121-57984140 | None:intergenic | 25.0% |
| ! | ACTCTTCTCAAAATATCAAA+AGG | + | chr8_3:57984342-57984361 | None:intergenic | 25.0% |
| !!! | TATGTACCCTTTACTTTTTA+AGG | + | chr8_3:57984717-57984736 | None:intergenic | 25.0% |
| !!! | CTATTTTTCTTACGTGATTT+AGG | + | chr8_3:57984910-57984929 | None:intergenic | 25.0% |
| !! | TCTTCGTTTTGTATAAATAC+CGG | - | chr8_3:57984971-57984990 | Msa1297570:intron | 25.0% |
| ! | TGCTTATTATGGAAATATGT+AGG | + | chr8_3:57985282-57985301 | None:intergenic | 25.0% |
| ! | ATATTTCCATAATAAGCATC+AGG | - | chr8_3:57985284-57985303 | Msa1297570:intron | 25.0% |
| ! | TCTTAAAAACGTTAGTTGTT+GGG | + | chr8_3:57985399-57985418 | None:intergenic | 25.0% |
| ! | ATCTTAAAAACGTTAGTTGT+TGG | + | chr8_3:57985400-57985419 | None:intergenic | 25.0% |
| ! | ACCCAACAACTATAAAAATA+GGG | - | chr8_3:57985428-57985447 | Msa1297570:intron | 25.0% |
| ! | ACATAGGGCTATTAAAATAA+AGG | - | chr8_3:57985584-57985603 | Msa1297570:intron | 25.0% |
| ! | TATGAAAGGACATTTACATT+TGG | - | chr8_3:57986020-57986039 | Msa1297570:intron | 25.0% |
| ! | ATGAAAGGACATTTACATTT+GGG | - | chr8_3:57986021-57986040 | Msa1297570:intron | 25.0% |
| ! | TATTGAGACTTAAAGAGTTA+TGG | - | chr8_3:57986278-57986297 | Msa1297570:intron | 25.0% |
| !! | TGTTTTATATATTTCAGCAC+GGG | - | chr8_3:57986524-57986543 | Msa1297570:CDS | 25.0% |
| !!! | TATTTTTATATGACATGGCT+GGG | - | chr8_3:57987341-57987360 | Msa1297570:intron | 25.0% |
| TATAGTTACAGTTGAAGAGA+TGG | + | chr8_3:57981636-57981655 | None:intergenic | 30.0% | |
| ! | CTTGCTTTAACTTTCTACAT+AGG | - | chr8_3:57981904-57981923 | Msa1297570:exon | 30.0% |
| GTAACTATCAACAATACACA+AGG | + | chr8_3:57981985-57982004 | None:intergenic | 30.0% | |
| !! | TGTATTGTTGATAGTTACAG+TGG | - | chr8_3:57981987-57982006 | Msa1297570:CDS | 30.0% |
| TCAATCTGCAAAACAAAAAC+CGG | + | chr8_3:57982520-57982539 | None:intergenic | 30.0% | |
| TTCTGTCCAAATATGATGAT+GGG | - | chr8_3:57982566-57982585 | Msa1297570:intron | 30.0% | |
| ! | TGTTACCTGCAAGTATTTTT+GGG | + | chr8_3:57982689-57982708 | None:intergenic | 30.0% |
| ATTGCTAAAGTCCATAACAT+GGG | - | chr8_3:57982754-57982773 | Msa1297570:intron | 30.0% | |
| AACAAGAATATCCCATGTTA+TGG | + | chr8_3:57982768-57982787 | None:intergenic | 30.0% | |
| TAGTCAGTTAGTCAAATAGT+TGG | - | chr8_3:57982899-57982918 | Msa1297570:intron | 30.0% | |
| GGAATGAACGAAATGTATAA+AGG | + | chr8_3:57982997-57983016 | None:intergenic | 30.0% | |
| AACTTCCAAAACATAGTGTT+TGG | - | chr8_3:57983344-57983363 | Msa1297570:intron | 30.0% | |
| AGTTATGACAGGAAAATGAA+TGG | + | chr8_3:57983475-57983494 | None:intergenic | 30.0% | |
| ! | TCTTAGTATATTTGCTGAGT+TGG | - | chr8_3:57983616-57983635 | Msa1297570:intron | 30.0% |
| AAGTAAAAGTTGACAGAAGA+AGG | - | chr8_3:57983873-57983892 | Msa1297570:intron | 30.0% | |
| GGAATAATCTAATCTTCGTA+TGG | + | chr8_3:57984028-57984047 | None:intergenic | 30.0% | |
| ATTCAAACTTAGGATTCTAG+TGG | + | chr8_3:57984302-57984321 | None:intergenic | 30.0% | |
| ACTAGAATCCTAAGTTTGAA+TGG | - | chr8_3:57984301-57984320 | Msa1297570:intron | 30.0% | |
| CTAGAATCCTAAGTTTGAAT+GGG | - | chr8_3:57984302-57984321 | Msa1297570:intron | 30.0% | |
| !! | GTTTGTTGCTCAAATTTTCA+GGG | + | chr8_3:57984774-57984793 | None:intergenic | 30.0% |
| !!! | AGTTTGTTGCTCAAATTTTC+AGG | + | chr8_3:57984775-57984794 | None:intergenic | 30.0% |
| GCAAAACAGATCATCAAAAT+TGG | - | chr8_3:57984933-57984952 | Msa1297570:intron | 30.0% | |
| ATAAACAGATATTGGTGCAA+TGG | + | chr8_3:57985174-57985193 | None:intergenic | 30.0% | |
| TTCATACCTGATGCTTATTA+TGG | + | chr8_3:57985293-57985312 | None:intergenic | 30.0% | |
| TGTGTCATATTGACAATCAT+TGG | + | chr8_3:57985331-57985350 | None:intergenic | 30.0% | |
| CACCCAACAACTATAAAAAT+AGG | - | chr8_3:57985427-57985446 | Msa1297570:intron | 30.0% | |
| !!! | CCCCTATTTTTATAGTTGTT+GGG | + | chr8_3:57985432-57985451 | None:intergenic | 30.0% |
| CCCAACAACTATAAAAATAG+GGG | - | chr8_3:57985429-57985448 | Msa1297570:intron | 30.0% | |
| CCAACAACTATAAAAATAGG+GGG | - | chr8_3:57985430-57985449 | Msa1297570:intron | 30.0% | |
| ATAAAAATAGGGGGAATACT+TGG | - | chr8_3:57985439-57985458 | Msa1297570:intron | 30.0% | |
| TAAAAATAGGGGGAATACTT+GGG | - | chr8_3:57985440-57985459 | Msa1297570:intron | 30.0% | |
| !! | TTCCCAATTACTTTTCACAT+AGG | - | chr8_3:57985568-57985587 | Msa1297570:intron | 30.0% |
| !! | TCCCAATTACTTTTCACATA+GGG | - | chr8_3:57985569-57985588 | Msa1297570:intron | 30.0% |
| AAAATAAAGGTCATGCTAAC+CGG | - | chr8_3:57985597-57985616 | Msa1297570:intron | 30.0% | |
| TATATTGCATGAAGAAAGTG+TGG | - | chr8_3:57985742-57985761 | Msa1297570:intron | 30.0% | |
| AAACAAAAGATTAACAGTGG+CGG | + | chr8_3:57985779-57985798 | None:intergenic | 30.0% | |
| AAGGATTGCTTAAGACATTA+AGG | - | chr8_3:57985970-57985989 | Msa1297570:intron | 30.0% | |
| AGGATTGCTTAAGACATTAA+GGG | - | chr8_3:57985971-57985990 | Msa1297570:intron | 30.0% | |
| ACTCAATTAAGGCTTATGAA+AGG | - | chr8_3:57986006-57986025 | Msa1297570:intron | 30.0% | |
| !! | CATACTTTTAAGGATTGCTT+AGG | - | chr8_3:57986094-57986113 | Msa1297570:intron | 30.0% |
| GGAAAAACCAAAAGCTATTA+GGG | - | chr8_3:57986119-57986138 | Msa1297570:intron | 30.0% | |
| !!! | GGTAATTTGTTTTCTAACGA+TGG | - | chr8_3:57986220-57986239 | Msa1297570:intron | 30.0% |
| ATTATGTAAACCCTGAAACA+AGG | + | chr8_3:57986354-57986373 | None:intergenic | 30.0% | |
| ATCAGGAGACAATAAAAGTA+TGG | - | chr8_3:57986381-57986400 | Msa1297570:intron | 30.0% | |
| AGCTTAATAACACATGGAAA+TGG | - | chr8_3:57986714-57986733 | Msa1297570:CDS | 30.0% | |
| TGAATGGTTTGAAAGATGTT+TGG | + | chr8_3:57986801-57986820 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCCTTCCCTTTTTT+GGG | + | chr8_3:57987218-57987237 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCCTTCCCTTTTT+TGG | + | chr8_3:57987219-57987238 | None:intergenic | 30.0% |
| ATGGCATCAATATATACACA+TGG | + | chr8_3:57987267-57987286 | None:intergenic | 30.0% | |
| TATATATTGATGCCATGTGA+TGG | - | chr8_3:57987271-57987290 | Msa1297570:intron | 30.0% | |
| !!! | CTATTTTTATATGACATGGC+TGG | - | chr8_3:57987340-57987359 | Msa1297570:intron | 30.0% |
| CACAAATTTAGAAGTAGATG+TGG | - | chr8_3:57987368-57987387 | Msa1297570:intron | 30.0% | |
| AATTTAGAAGTAGATGTGGA+CGG | - | chr8_3:57987372-57987391 | Msa1297570:intron | 30.0% | |
| GTTAGTTAGTTACCTTGCTT+AGG | + | chr8_3:57981602-57981621 | None:intergenic | 35.0% | |
| CTATAATGACTATAGAGCTG+CGG | + | chr8_3:57982020-57982039 | None:intergenic | 35.0% | |
| CAAATATAAACATCCAGCCT+GGG | + | chr8_3:57982267-57982286 | None:intergenic | 35.0% | |
| CAGGCTGGATGTTTATATTT+GGG | - | chr8_3:57982266-57982285 | Msa1297570:intron | 35.0% | |
| ! | GGATGTTTATATTTGGGACA+TGG | - | chr8_3:57982272-57982291 | Msa1297570:intron | 35.0% |
| TAAGGAGTTGAGCAGTATAA+GGG | + | chr8_3:57982304-57982323 | None:intergenic | 35.0% | |
| GGCATAAGATGATTTCAGTA+AGG | + | chr8_3:57982322-57982341 | None:intergenic | 35.0% | |
| CCACAACTAAAAACAATCCA+TGG | + | chr8_3:57982481-57982500 | None:intergenic | 35.0% | |
| !!! | CCATGGATTGTTTTTAGTTG+TGG | - | chr8_3:57982478-57982497 | Msa1297570:CDS | 35.0% |
| TTAGTTGTGGAGAGTTAGTT+TGG | - | chr8_3:57982491-57982510 | Msa1297570:CDS | 35.0% | |
| TTGGACAGAACATCAAGAAA+TGG | + | chr8_3:57982556-57982575 | None:intergenic | 35.0% | |
| GTTCTGTCCAAATATGATGA+TGG | - | chr8_3:57982565-57982584 | Msa1297570:intron | 35.0% | |
| GGTTGAAGTCATAATCAGAT+AGG | + | chr8_3:57982597-57982616 | None:intergenic | 35.0% | |
| GACTTCAACCAAGATGAATT+AGG | - | chr8_3:57982607-57982626 | Msa1297570:intron | 35.0% | |
| TATAGCCCAAAAATACTTGC+AGG | - | chr8_3:57982681-57982700 | Msa1297570:CDS | 35.0% | |
| ! | GTGTTACCTGCAAGTATTTT+TGG | + | chr8_3:57982690-57982709 | None:intergenic | 35.0% |
| !! | TAACACTTCTGGAGCATTAT+CGG | - | chr8_3:57982704-57982723 | Msa1297570:CDS | 35.0% |
| CATTGCTAAAGTCCATAACA+TGG | - | chr8_3:57982753-57982772 | Msa1297570:intron | 35.0% | |
| ! | TACGCTTCATGTTTTCTTGA+TGG | - | chr8_3:57982843-57982862 | Msa1297570:intron | 35.0% |
| !! | TTCATGTTTTCTTGATGGAC+TGG | - | chr8_3:57982848-57982867 | Msa1297570:intron | 35.0% |
| !! | CTGGTTTGGTATATACTACA+TGG | - | chr8_3:57982867-57982886 | Msa1297570:intron | 35.0% |
| ! | ACACTCCAAACACTATGTTT+TGG | + | chr8_3:57983352-57983371 | None:intergenic | 35.0% |
| !! | GTGTTTGGAGTGTTATTTGT+AGG | - | chr8_3:57983359-57983378 | Msa1297570:intron | 35.0% |
| !! | GTTTTAGGTAAAATGAAGGG+AGG | + | chr8_3:57983687-57983706 | None:intergenic | 35.0% |
| GTTGACAATTCATCAAGACA+TGG | - | chr8_3:57983731-57983750 | Msa1297570:intron | 35.0% | |
| ! | AGCTTAGGAAATTTGGTGAT+TGG | - | chr8_3:57983756-57983775 | Msa1297570:intron | 35.0% |
| ACAGAAGAAGGTAAGATGAA+GGG | - | chr8_3:57983885-57983904 | Msa1297570:intron | 35.0% | |
| ATACACTATGAGCACTTGTA+TGG | + | chr8_3:57983990-57984009 | None:intergenic | 35.0% | |
| ! | GAAGCACTTGTAATACACTA+TGG | + | chr8_3:57984062-57984081 | None:intergenic | 35.0% |
| CAAAGTTTCAAACAAGTGCT+CGG | - | chr8_3:57983916-57983935 | Msa1297570:intron | 35.0% | |
| CTCTTTGCTCTTAAGAATGT+GGG | + | chr8_3:57984215-57984234 | None:intergenic | 35.0% | |
| ACTCTTTGCTCTTAAGAATG+TGG | + | chr8_3:57984216-57984235 | None:intergenic | 35.0% | |
| CATTCTTAAGAGCAAAGAGT+CGG | - | chr8_3:57984216-57984235 | Msa1297570:intron | 35.0% | |
| ATTCTTAAGAGCAAAGAGTC+GGG | - | chr8_3:57984217-57984236 | Msa1297570:intron | 35.0% | |
| TTGGAATCCCATTCAAACTT+AGG | + | chr8_3:57984312-57984331 | None:intergenic | 35.0% | |
| !! | AATATCAAAAGGCTCTGAGT+TGG | + | chr8_3:57984331-57984350 | None:intergenic | 35.0% |
| !! | TTTTGAGAAGAGTTGCTCTT+TGG | - | chr8_3:57984349-57984368 | Msa1297570:intron | 35.0% |
| AGTAGTGTATTATGAGTCTC+AGG | + | chr8_3:57984457-57984476 | None:intergenic | 35.0% | |
| TTGTTGCACTGAAGTATGAA+CGG | + | chr8_3:57984621-57984640 | None:intergenic | 35.0% | |
| CATACTTCAGTGCAACAATT+CGG | - | chr8_3:57984623-57984642 | Msa1297570:intron | 35.0% | |
| ! | CTCTACCCAAACTTTTCATT+AGG | - | chr8_3:57984745-57984764 | Msa1297570:intron | 35.0% |
| GGAAGCCTAATGAAAAGTTT+GGG | + | chr8_3:57984753-57984772 | None:intergenic | 35.0% | |
| ! | TCGTTTTGTATAAATACCGG+AGG | - | chr8_3:57984974-57984993 | Msa1297570:intron | 35.0% |
| ! | TCATAAAAGGTACATGTGCA+AGG | + | chr8_3:57985063-57985082 | None:intergenic | 35.0% |
| AAACGTTAGTTGTTGGGTAA+TGG | + | chr8_3:57985393-57985412 | None:intergenic | 35.0% | |
| !!! | CCCCCTATTTTTATAGTTGT+TGG | + | chr8_3:57985433-57985452 | None:intergenic | 35.0% |
| CAAAACGTGATGAAATTGCT+TGG | + | chr8_3:57985547-57985566 | None:intergenic | 35.0% | |
| GCCCTATGTGAAAAGTAATT+GGG | + | chr8_3:57985573-57985592 | None:intergenic | 35.0% | |
| AGCCCTATGTGAAAAGTAAT+TGG | + | chr8_3:57985574-57985593 | None:intergenic | 35.0% | |
| AAAGATGTGAGCAAAGGTTA+AGG | + | chr8_3:57985716-57985735 | None:intergenic | 35.0% | |
| AACAAAAGATTAACAGTGGC+GGG | + | chr8_3:57985778-57985797 | None:intergenic | 35.0% | |
| GGCAAACAAAAGATTAACAG+TGG | + | chr8_3:57985782-57985801 | None:intergenic | 35.0% | |
| AAAGTGTGTTATGCAAGCTA+AGG | + | chr8_3:57985949-57985968 | None:intergenic | 35.0% | |
| ! | GCTTGCATAACACACTTTTA+AGG | - | chr8_3:57985951-57985970 | Msa1297570:intron | 35.0% |
| ATTGCTTAAGACATTAAGGG+AGG | - | chr8_3:57985974-57985993 | Msa1297570:intron | 35.0% | |
| ! | GCTTGCGTAACATACTTTTA+AGG | - | chr8_3:57986084-57986103 | Msa1297570:intron | 35.0% |
| !! | ACTTTTAAGGATTGCTTAGG+AGG | - | chr8_3:57986097-57986116 | Msa1297570:intron | 35.0% |
| !! | CTTTTAAGGATTGCTTAGGA+GGG | - | chr8_3:57986098-57986117 | Msa1297570:intron | 35.0% |
| GGGAAAAACCAAAAGCTATT+AGG | - | chr8_3:57986118-57986137 | Msa1297570:intron | 35.0% | |
| ! | TGCTAAACCCTAATAGCTTT+TGG | + | chr8_3:57986129-57986148 | None:intergenic | 35.0% |
| CATCTCCTATCTATAAGCAA+AGG | + | chr8_3:57986201-57986220 | None:intergenic | 35.0% | |
| CTTTGCTTATAGATAGGAGA+TGG | - | chr8_3:57986199-57986218 | Msa1297570:intron | 35.0% | |
| CTGATGAATATACCGACAAA+TGG | - | chr8_3:57986423-57986442 | Msa1297570:CDS | 35.0% | |
| !!! | GTGAATGTTTTAGTTACAGC+TGG | - | chr8_3:57986645-57986664 | Msa1297570:intron | 35.0% |
| ! | AGCAAGCATTTTACAAGAGA+TGG | + | chr8_3:57986681-57986700 | None:intergenic | 35.0% |
| AAAATGCTTGCTCTTTCATC+TGG | - | chr8_3:57986689-57986708 | Msa1297570:CDS | 35.0% | |
| GGAAAATTCAATGTTTCCGA+TGG | - | chr8_3:57986937-57986956 | Msa1297570:intron | 35.0% | |
| AAGCTGCAGAAATCATGAAA+TGG | - | chr8_3:57987027-57987046 | Msa1297570:intron | 35.0% | |
| GATATACCACAGAGAAATAG+TGG | + | chr8_3:57987124-57987143 | None:intergenic | 35.0% | |
| TCTTCGTCATTGTCATTGTT+TGG | + | chr8_3:57987146-57987165 | None:intergenic | 35.0% | |
| TATACACATGGCAACACAAT+TGG | + | chr8_3:57987255-57987274 | None:intergenic | 35.0% | |
| TGCCACAACTTAGATGTTAA+CGG | - | chr8_3:57987295-57987314 | Msa1297570:intron | 35.0% | |
| ATTTAGAAGTAGATGTGGAC+GGG | - | chr8_3:57987373-57987392 | Msa1297570:intron | 35.0% | |
| CATCTTATATACATGAGCAG+AGG | + | chr8_3:57987419-57987438 | None:intergenic | 35.0% | |
| TGCAGCTAAATGAACGATAA+AGG | + | chr8_3:57987497-57987516 | None:intergenic | 35.0% | |
| AGTTAGTTACCTTGCTTAGG+TGG | + | chr8_3:57981599-57981618 | None:intergenic | 40.0% | |
| CGATATGTGTTTGACAACAC+CGG | - | chr8_3:57982081-57982100 | Msa1297570:CDS | 40.0% | |
| TAACATTGTGCAATGAGTCG+TGG | - | chr8_3:57982145-57982164 | Msa1297570:CDS | 40.0% | |
| CCAAATATAAACATCCAGCC+TGG | + | chr8_3:57982268-57982287 | None:intergenic | 40.0% | |
| CCAGGCTGGATGTTTATATT+TGG | - | chr8_3:57982265-57982284 | Msa1297570:intron | 40.0% | |
| GTAAGGAGTTGAGCAGTATA+AGG | + | chr8_3:57982305-57982324 | None:intergenic | 40.0% | |
| ACTGAAATCATCTTATGCCG+AGG | - | chr8_3:57982323-57982342 | Msa1297570:intron | 40.0% | |
| !! | GTCCAAATATGATGATGGGA+AGG | - | chr8_3:57982570-57982589 | Msa1297570:intron | 40.0% |
| GTCCTTCCCATCATCATATT+TGG | + | chr8_3:57982575-57982594 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGCATCATCATG+TGG | + | chr8_3:57982637-57982656 | None:intergenic | 40.0% |
| ATACTTGCAGGTAACACTTC+TGG | - | chr8_3:57982693-57982712 | Msa1297570:CDS | 40.0% | |
| !!! | GTTTTCTTGATGGACTGGTT+TGG | - | chr8_3:57982853-57982872 | Msa1297570:intron | 40.0% |
| ATTTAGATAGCTGCGAACCT+AGG | - | chr8_3:57983392-57983411 | Msa1297570:intron | 40.0% | |
| TTTAGATAGCTGCGAACCTA+GGG | - | chr8_3:57983393-57983412 | Msa1297570:intron | 40.0% | |
| TGAGTTGCAAAACTTGCAAG+TGG | - | chr8_3:57983445-57983464 | Msa1297570:intron | 40.0% | |
| CATGGCAAGCTTAGGAAATT+TGG | - | chr8_3:57983749-57983768 | Msa1297570:intron | 40.0% | |
| GACAGAAGAAGGTAAGATGA+AGG | - | chr8_3:57983884-57983903 | Msa1297570:intron | 40.0% | |
| TACACTATGGCTCAGAGTTA+TGG | + | chr8_3:57984049-57984068 | None:intergenic | 40.0% | |
| TTAACTGTTCAACCTGAGAG+CGG | + | chr8_3:57984154-57984173 | None:intergenic | 40.0% | |
| !! | CTCTCAGGTTGAACAGTTAA+GGG | - | chr8_3:57984154-57984173 | Msa1297570:intron | 40.0% |
| GAAGGGTTATTGTCTATCGT+TGG | - | chr8_3:57984407-57984426 | Msa1297570:intron | 40.0% | |
| TGAAAAGTTTGGGTAGAGCA+CGG | + | chr8_3:57984743-57984762 | None:intergenic | 40.0% | |
| GGGAAGCCTAATGAAAAGTT+TGG | + | chr8_3:57984754-57984773 | None:intergenic | 40.0% | |
| TGATGCAAAGATGTGAGCAA+AGG | + | chr8_3:57985722-57985741 | None:intergenic | 40.0% | |
| ACAAAAGATTAACAGTGGCG+GGG | + | chr8_3:57985777-57985796 | None:intergenic | 40.0% | |
| ! | GAGTCGTGAAACAATTTTGC+AGG | + | chr8_3:57985803-57985822 | None:intergenic | 40.0% |
| AAGACATTAAGGGAGGTAGT+TGG | - | chr8_3:57985981-57986000 | Msa1297570:intron | 40.0% | |
| GGTAGTTGGCAACTCAATTA+AGG | - | chr8_3:57985995-57986014 | Msa1297570:intron | 40.0% | |
| ACCAGCCTTTGCTTATAGAT+AGG | - | chr8_3:57986193-57986212 | Msa1297570:intron | 40.0% | |
| TCCTATCTATAAGCAAAGGC+TGG | + | chr8_3:57986197-57986216 | None:intergenic | 40.0% | |
| ! | ATATTCTCGCTCCTTGTTTC+AGG | - | chr8_3:57986340-57986359 | Msa1297570:intron | 40.0% |
| ! | TATTCTCGCTCCTTGTTTCA+GGG | - | chr8_3:57986341-57986360 | Msa1297570:intron | 40.0% |
| ACCTGATGAAAGCCATTTGT+CGG | + | chr8_3:57986438-57986457 | None:intergenic | 40.0% | |
| CTGGACAGCTTAATAACACA+TGG | - | chr8_3:57986708-57986727 | Msa1297570:CDS | 40.0% | |
| TCATTTCAGTGTATAGCTCC+TGG | - | chr8_3:57986907-57986926 | Msa1297570:intron | 40.0% | |
| CATTTCAGTGTATAGCTCCT+GGG | - | chr8_3:57986908-57986927 | Msa1297570:intron | 40.0% | |
| TCAATGTTTCCGATGGATCA+AGG | - | chr8_3:57986944-57986963 | Msa1297570:intron | 40.0% | |
| ATCACACAAAAGCGAACGTT+GGG | + | chr8_3:57986984-57987003 | None:intergenic | 40.0% | |
| AATCACACAAAAGCGAACGT+TGG | + | chr8_3:57986985-57987004 | None:intergenic | 40.0% | |
| !! | AACGTTCGCTTTTGTGTGAT+TGG | - | chr8_3:57986984-57987003 | Msa1297570:intron | 40.0% |
| TTTGTGTGATTGGAGATGGA+TGG | - | chr8_3:57986994-57987013 | Msa1297570:intron | 40.0% | |
| TTGTGTGATTGGAGATGGAT+GGG | - | chr8_3:57986995-57987014 | Msa1297570:intron | 40.0% | |
| !! | CGCGGGTCAATTTTAACAAA+CGG | + | chr8_3:57987053-57987072 | None:intergenic | 40.0% |
| ! | GAAATAGTGGCCAACTGTTT+TGG | + | chr8_3:57987111-57987130 | None:intergenic | 40.0% |
| GGGAAAAAAAAACAGCAGCA+TGG | - | chr8_3:57987229-57987248 | Msa1297570:intron | 40.0% | |
| GCCACAACTTAGATGTTAAC+GGG | - | chr8_3:57987296-57987315 | Msa1297570:intron | 40.0% | |
| ACCCGTTAACATCTAAGTTG+TGG | + | chr8_3:57987300-57987319 | None:intergenic | 40.0% | |
| AAAGGTGAGATATGATGAGC+TGG | + | chr8_3:57987479-57987498 | None:intergenic | 40.0% | |
| ! | AGTCGTGGTGTTTTTCTGCA+GGG | - | chr8_3:57982160-57982179 | Msa1297570:intron | 45.0% |
| TATAAACATCCAGCCTGGGA+TGG | + | chr8_3:57982263-57982282 | None:intergenic | 45.0% | |
| TCTTATGCCGAGGCTTTCAA+CGG | - | chr8_3:57982333-57982352 | Msa1297570:intron | 45.0% | |
| TTTCAGACCGTTGAAAGCCT+CGG | + | chr8_3:57982343-57982362 | None:intergenic | 45.0% | |
| GGTCTGAAAGATGTGCAGAA+AGG | - | chr8_3:57982354-57982373 | Msa1297570:intron | 45.0% | |
| !! | TGGAGAGTTAGTTTGGTGTC+CGG | - | chr8_3:57982498-57982517 | Msa1297570:CDS | 45.0% |
| TGTTGGCATCATCATGTGGA+GGG | + | chr8_3:57982633-57982652 | None:intergenic | 45.0% | |
| TTGTTGGCATCATCATGTGG+AGG | + | chr8_3:57982634-57982653 | None:intergenic | 45.0% | |
| CACAGCAAAATACCATCCCT+AGG | + | chr8_3:57983412-57983431 | None:intergenic | 45.0% | |
| CATCAAGACATGGCAAGCTT+AGG | - | chr8_3:57983741-57983760 | Msa1297570:intron | 45.0% | |
| GAAGAAGGTAAGATGAAGGG+AGG | - | chr8_3:57983888-57983907 | Msa1297570:intron | 45.0% | |
| CACATTAGTTATCCGCTCTC+AGG | - | chr8_3:57984139-57984158 | Msa1297570:intron | 45.0% | |
| !! | GCTCTCAGGTTGAACAGTTA+AGG | - | chr8_3:57984153-57984172 | Msa1297570:intron | 45.0% |
| ! | CAGGTTGAACAGTTAAGGGT+CGG | - | chr8_3:57984158-57984177 | Msa1297570:intron | 45.0% |
| AAAGAGAAGCTCTTCGTTCC+CGG | - | chr8_3:57984250-57984269 | Msa1297570:intron | 45.0% | |
| TAGGATTCTAGTGGTTCCGT+AGG | + | chr8_3:57984293-57984312 | None:intergenic | 45.0% | |
| AAGTTGTAAGCTGTGCTCGA+AGG | - | chr8_3:57984389-57984408 | Msa1297570:intron | 45.0% | |
| AGTTGTAAGCTGTGCTCGAA+GGG | - | chr8_3:57984390-57984409 | Msa1297570:intron | 45.0% | |
| ! | TTGTCTATCGTTGGCCTCTA+TGG | - | chr8_3:57984416-57984435 | Msa1297570:intron | 45.0% |
| CCTCTATGGTAGAACCAGTT+GGG | - | chr8_3:57984430-57984449 | Msa1297570:intron | 45.0% | |
| CTCTATGGTAGAACCAGTTG+GGG | - | chr8_3:57984431-57984450 | Msa1297570:intron | 45.0% | |
| GAAAAGTTTGGGTAGAGCAC+GGG | + | chr8_3:57984742-57984761 | None:intergenic | 45.0% | |
| TCTACAAAACCAGCCCCATT+TGG | + | chr8_3:57985492-57985511 | None:intergenic | 45.0% | |
| TAATGTTAACCAGTGCCCCT+GGG | + | chr8_3:57985641-57985660 | None:intergenic | 45.0% | |
| ACCGACAAATGGCTTTCATC+AGG | - | chr8_3:57986434-57986453 | Msa1297570:CDS | 45.0% | |
| AGTTGAGTCTGTGCTTGTGT+TGG | + | chr8_3:57986607-57986626 | None:intergenic | 45.0% | |
| ! | TTGAATTTTCCCCACTTCCC+AGG | + | chr8_3:57986928-57986947 | None:intergenic | 45.0% |
| TGAAACGCTCCTTGATCCAT+CGG | + | chr8_3:57986956-57986975 | None:intergenic | 45.0% | |
| ! | CGCTTTTGTGTGATTGGAGA+TGG | - | chr8_3:57986990-57987009 | Msa1297570:intron | 45.0% |
| ! | TATGAGATTTTCCTGGTCGC+GGG | + | chr8_3:57987070-57987089 | None:intergenic | 45.0% |
| ! | CTATGAGATTTTCCTGGTCG+CGG | + | chr8_3:57987071-57987090 | None:intergenic | 45.0% |
| ! | GGGAACCTATGAGATTTTCC+TGG | + | chr8_3:57987077-57987096 | None:intergenic | 45.0% |
| GGAAAATCTCATAGGTTCCC+TGG | - | chr8_3:57987077-57987096 | Msa1297570:intron | 45.0% | |
| ! | AGTTGGCCACTATTTCTCTG+TGG | - | chr8_3:57987115-57987134 | Msa1297570:intron | 45.0% |
| ACAGACAGGATCACGGAAAA+GGG | + | chr8_3:57987193-57987212 | None:intergenic | 45.0% | |
| AACAGACAGGATCACGGAAA+AGG | + | chr8_3:57987194-57987213 | None:intergenic | 45.0% | |
| TCCTGTCTGTTGCCCAAAAA+AGG | - | chr8_3:57987203-57987222 | Msa1297570:intron | 45.0% | |
| CCTGTCTGTTGCCCAAAAAA+GGG | - | chr8_3:57987204-57987223 | Msa1297570:intron | 45.0% | |
| TCTGTTGCCCAAAAAAGGGA+AGG | - | chr8_3:57987208-57987227 | Msa1297570:intron | 45.0% | |
| CTGTTGCCCAAAAAAGGGAA+GGG | - | chr8_3:57987209-57987228 | Msa1297570:intron | 45.0% | |
| ATGAGCTGGTGACCAAGATA+AGG | + | chr8_3:57987465-57987484 | None:intergenic | 45.0% | |
| TCGTTCATTTAGCTGCAGTC+TGG | - | chr8_3:57987500-57987519 | Msa1297570:five_prime_UTR | 45.0% | |
| !! | TGATAAAATAAATATTTAAA+TGG | - | chr8_3:57983829-57983848 | Msa1297570:intron | 5.0% |
| !!! | AATAAATATTTAAGTTTTAA+AGG | + | chr8_3:57983964-57983983 | None:intergenic | 5.0% |
| TCTCTGCAACCACCTAAGCA+AGG | - | chr8_3:57981587-57981606 | Msa1297570:three_prime_UTR | 50.0% | |
| ! | GAGTCGTGGTGTTTTTCTGC+AGG | - | chr8_3:57982159-57982178 | Msa1297570:intron | 50.0% |
| ! | TTTTTCTGCAGGGCACAGCT+AGG | - | chr8_3:57982170-57982189 | Msa1297570:intron | 50.0% |
| GCACAGCTAGGTTAGTGGAA+TGG | - | chr8_3:57982182-57982201 | Msa1297570:intron | 50.0% | |
| CAGCTAGGTTAGTGGAATGG+CGG | - | chr8_3:57982185-57982204 | Msa1297570:intron | 50.0% | |
| !! | TGCAGAAAGGTGTCGAGCTT+GGG | - | chr8_3:57982367-57982386 | Msa1297570:CDS | 50.0% |
| GTGGAGGGCCTAATTCATCT+TGG | + | chr8_3:57982618-57982637 | None:intergenic | 50.0% | |
| CTTAAGAGCAAAGAGTCGGG+CGG | - | chr8_3:57984220-57984239 | Msa1297570:intron | 50.0% | |
| TCTCCTGTAGCTGGATCCTA+CGG | - | chr8_3:57984274-57984293 | Msa1297570:intron | 50.0% | |
| GCCTCTATGGTAGAACCAGT+TGG | - | chr8_3:57984429-57984448 | Msa1297570:intron | 50.0% | |
| !! | CCCAACTGGTTCTACCATAG+AGG | + | chr8_3:57984433-57984452 | None:intergenic | 50.0% |
| AACTCCTGCCACTGCCAAAT+GGG | - | chr8_3:57985475-57985494 | Msa1297570:intron | 50.0% | |
| GTAATGTTAACCAGTGCCCC+TGG | + | chr8_3:57985642-57985661 | None:intergenic | 50.0% | |
| AGTGTATAGCTCCTGGGAAG+TGG | - | chr8_3:57986914-57986933 | Msa1297570:intron | 50.0% | |
| GTGTATAGCTCCTGGGAAGT+GGG | - | chr8_3:57986915-57986934 | Msa1297570:intron | 50.0% | |
| TGTATAGCTCCTGGGAAGTG+GGG | - | chr8_3:57986916-57986935 | Msa1297570:intron | 50.0% | |
| CACAAAAGCGAACGTTGGGA+TGG | + | chr8_3:57986980-57986999 | None:intergenic | 50.0% | |
| GTTAAAATTGACCCGCGACC+AGG | - | chr8_3:57987056-57987075 | Msa1297570:intron | 50.0% | |
| CGCGACCAGGAAAATCTCAT+AGG | - | chr8_3:57987069-57987088 | Msa1297570:intron | 50.0% | |
| !! | CTGTTTTGGATGTGAGGCCA+GGG | + | chr8_3:57987097-57987116 | None:intergenic | 50.0% |
| !! | ACTGTTTTGGATGTGAGGCC+AGG | + | chr8_3:57987098-57987117 | None:intergenic | 50.0% |
| GGCCTCACATCCAAAACAGT+TGG | - | chr8_3:57987098-57987117 | Msa1297570:intron | 50.0% | |
| !! | GGCCAACTGTTTTGGATGTG+AGG | + | chr8_3:57987103-57987122 | None:intergenic | 50.0% |
| TTGGGCAACAGACAGGATCA+CGG | + | chr8_3:57987200-57987219 | None:intergenic | 50.0% | |
| !!! | CCCTTTTTTGGGCAACAGAC+AGG | + | chr8_3:57987207-57987226 | None:intergenic | 50.0% |
| AAGTTGTGGCAGCCATCACA+TGG | + | chr8_3:57987286-57987305 | None:intergenic | 50.0% | |
| AGTGGAATGGCGGTTGCATC+TGG | - | chr8_3:57982195-57982214 | Msa1297570:intron | 55.0% | |
| GTGGAATGGCGGTTGCATCT+GGG | - | chr8_3:57982196-57982215 | Msa1297570:intron | 55.0% | |
| GGATGAGGGCGGATGAAACA+CGG | - | chr8_3:57982217-57982236 | Msa1297570:intron | 55.0% | |
| GATGAGGGCGGATGAAACAC+GGG | - | chr8_3:57982218-57982237 | Msa1297570:intron | 55.0% | |
| CCTGGGATGGATGTTGTCAC+TGG | + | chr8_3:57982250-57982269 | None:intergenic | 55.0% | |
| CCAGTGACAACATCCATCCC+AGG | - | chr8_3:57982247-57982266 | Msa1297570:intron | 55.0% | |
| TGACAACATCCATCCCAGGC+TGG | - | chr8_3:57982251-57982270 | Msa1297570:intron | 55.0% | |
| !! | GTGCAGAAAGGTGTCGAGCT+TGG | - | chr8_3:57982366-57982385 | Msa1297570:CDS | 55.0% |
| TGTCGAGCTTGGGAAGACGT+GGG | - | chr8_3:57982377-57982396 | Msa1297570:CDS | 55.0% | |
| GATAGCTGCGAACCTAGGGA+TGG | - | chr8_3:57983397-57983416 | Msa1297570:intron | 55.0% | |
| GATCCAGCTACAGGAGAACC+GGG | + | chr8_3:57984271-57984290 | None:intergenic | 55.0% | |
| GGATCCAGCTACAGGAGAAC+CGG | + | chr8_3:57984272-57984291 | None:intergenic | 55.0% | |
| GTTCCGTAGGATCCAGCTAC+AGG | + | chr8_3:57984280-57984299 | None:intergenic | 55.0% | |
| TATGAGTCTCAGGCCCCAAC+TGG | + | chr8_3:57984447-57984466 | None:intergenic | 55.0% | |
| AATATGACCCGTGCGACGCA+CGG | + | chr8_3:57984491-57984510 | None:intergenic | 55.0% | |
| GAACTCCTGCCACTGCCAAA+TGG | - | chr8_3:57985474-57985493 | Msa1297570:intron | 55.0% | |
| ACTCCTGCCACTGCCAAATG+GGG | - | chr8_3:57985476-57985495 | Msa1297570:intron | 55.0% | |
| AAACCAGCCCCATTTGGCAG+TGG | + | chr8_3:57985486-57985505 | None:intergenic | 55.0% | |
| ! | GACACTGGTTAAGGGGACAC+CGG | + | chr8_3:57985619-57985638 | None:intergenic | 55.0% |
| TCCCCTTAACCAGTGTCCCA+GGG | - | chr8_3:57985622-57985641 | Msa1297570:intron | 55.0% | |
| TTCAGCACGGGCCTGTTTGA+CGG | - | chr8_3:57986536-57986555 | Msa1297570:CDS | 55.0% | |
| GCAGGGCACAGCTAGGTTAG+TGG | - | chr8_3:57982177-57982196 | Msa1297570:intron | 60.0% | |
| ! | TGGCGGTTGCATCTGGGATG+AGG | - | chr8_3:57982202-57982221 | Msa1297570:intron | 60.0% |
| ! | GGCGGTTGCATCTGGGATGA+GGG | - | chr8_3:57982203-57982222 | Msa1297570:intron | 60.0% |
| ! | GGTTGCATCTGGGATGAGGG+CGG | - | chr8_3:57982206-57982225 | Msa1297570:intron | 60.0% |
| GTGTCGAGCTTGGGAAGACG+TGG | - | chr8_3:57982376-57982395 | Msa1297570:CDS | 60.0% | |
| GTTCCCGGTTCTCCTGTAGC+TGG | - | chr8_3:57984265-57984284 | Msa1297570:intron | 60.0% | |
| ATATGACCCGTGCGACGCAC+GGG | + | chr8_3:57984490-57984509 | None:intergenic | 60.0% | |
| GTCCCCTTAACCAGTGTCCC+AGG | - | chr8_3:57985621-57985640 | Msa1297570:intron | 60.0% | |
| ! | CCCCTGGGACACTGGTTAAG+GGG | + | chr8_3:57985626-57985645 | None:intergenic | 60.0% |
| CCCCTTAACCAGTGTCCCAG+GGG | - | chr8_3:57985623-57985642 | Msa1297570:intron | 60.0% | |
| ! | GCCCCTGGGACACTGGTTAA+GGG | + | chr8_3:57985627-57985646 | None:intergenic | 60.0% |
| ! | TGCCCCTGGGACACTGGTTA+AGG | + | chr8_3:57985628-57985647 | None:intergenic | 60.0% |
| CCATTGACCCGTGCGTCGCA+CGG | - | chr8_3:57984480-57984499 | Msa1297570:intron | 65.0% | |
| CATTGACCCGTGCGTCGCAC+GGG | - | chr8_3:57984481-57984500 | Msa1297570:intron | 65.0% | |
| CAGCCCCATTTGGCAGTGGC+AGG | + | chr8_3:57985482-57985501 | None:intergenic | 65.0% | |
| CTGCCACTGCCAAATGGGGC+TGG | - | chr8_3:57985480-57985499 | Msa1297570:intron | 65.0% | |
| ! | AACCAGTGTCCCAGGGGCAC+TGG | - | chr8_3:57985629-57985648 | Msa1297570:intron | 65.0% |
| AACCAGTGCCCCTGGGACAC+TGG | + | chr8_3:57985634-57985653 | None:intergenic | 65.0% | |
| CCGTGCGACGCACGGGTCAA+TGG | + | chr8_3:57984483-57984502 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 57981566 | 57987526 | 57981566 | ID=Msa1297570;Name=Msa1297570 |
| chr8_3 | mRNA | 57981566 | 57987526 | 57981566 | ID=Msa1297570-mRNA-1;Parent=Msa1297570;Name=Msa1297570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=63|1|1|1|0.6|0.66|6|357|318 |
| chr8_3 | exon | 57981566 | 57982176 | 57981566 | ID=Msa1297570-mRNA-1:exon:16600;Parent=Msa1297570-mRNA-1 |
| chr8_3 | exon | 57982357 | 57982551 | 57982357 | ID=Msa1297570-mRNA-1:exon:16599;Parent=Msa1297570-mRNA-1 |
| chr8_3 | exon | 57982637 | 57982730 | 57982637 | ID=Msa1297570-mRNA-1:exon:16598;Parent=Msa1297570-mRNA-1 |
| chr8_3 | exon | 57986390 | 57986557 | 57986390 | ID=Msa1297570-mRNA-1:exon:16597;Parent=Msa1297570-mRNA-1 |
| chr8_3 | exon | 57986646 | 57986911 | 57986646 | ID=Msa1297570-mRNA-1:exon:16596;Parent=Msa1297570-mRNA-1 |
| chr8_3 | exon | 57987484 | 57987526 | 57987484 | ID=Msa1297570-mRNA-1:exon:16595;Parent=Msa1297570-mRNA-1 |
| chr8_3 | five_prime_UTR | 57987484 | 57987526 | 57987484 | ID=Msa1297570-mRNA-1:five_prime_utr;Parent=Msa1297570-mRNA-1 |
| chr8_3 | five_prime_UTR | 57986892 | 57986911 | 57986892 | ID=Msa1297570-mRNA-1:five_prime_utr;Parent=Msa1297570-mRNA-1 |
| chr8_3 | CDS | 57986646 | 57986891 | 57986646 | ID=Msa1297570-mRNA-1:cds;Parent=Msa1297570-mRNA-1 |
| chr8_3 | CDS | 57986390 | 57986557 | 57986390 | ID=Msa1297570-mRNA-1:cds;Parent=Msa1297570-mRNA-1 |
| chr8_3 | CDS | 57982637 | 57982730 | 57982637 | ID=Msa1297570-mRNA-1:cds;Parent=Msa1297570-mRNA-1 |
| chr8_3 | CDS | 57982357 | 57982551 | 57982357 | ID=Msa1297570-mRNA-1:cds;Parent=Msa1297570-mRNA-1 |
| chr8_3 | CDS | 57981923 | 57982176 | 57981923 | ID=Msa1297570-mRNA-1:cds;Parent=Msa1297570-mRNA-1 |
| chr8_3 | three_prime_UTR | 57981566 | 57981922 | 57981566 | ID=Msa1297570-mRNA-1:three_prime_utr;Parent=Msa1297570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
