Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297510 | XP_003608623.4 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297510 | sp|O82162|EYA_ARATH | 59.727 | 293 | 110 | 1 | 24 | 316 | 19 | 303 | 8.78e-133 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297510 | I3S9D7 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1250510 | Msa1297510 | 0.983806 | 9.272743e-159 | -8.615850e-47 |
| Msa1297510 | Msa1297570 | 0.971306 | 5.893853e-133 | -8.615850e-47 |
| Msa1297510 | Msa1385770 | 0.808245 | 3.404648e-50 | -8.615850e-47 |
| Msa1297510 | Msa1409240 | 0.808682 | 2.746707e-50 | -8.615850e-47 |
| Msa1297510 | Msa1426890 | 0.986247 | 3.735787e-166 | -8.615850e-47 |
| Msa1297510 | Msa1434140 | 0.812187 | 4.809047e-51 | -8.615850e-47 |
| Msa1297510 | Msa1435240 | 0.989360 | 8.674242e-178 | -8.615850e-47 |
| Msa1297510 | Msa1440200 | 0.832565 | 8.790561e-56 | -8.615850e-47 |
| Msa0398670 | Msa1297510 | 0.806937 | 6.454866e-50 | -8.615850e-47 |
| Msa0304960 | Msa1297510 | 0.807856 | 4.120195e-50 | -8.615850e-47 |
| Msa0934850 | Msa1297510 | 0.847249 | 1.303228e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297510 | MtrunA17_Chr4g0054711 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297510 | AT2G35320.1 | 59.727 | 293 | 110 | 1 | 24 | 316 | 19 | 303 | 8.93e-134 | 382 |
Find 99 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGCTGGATGTTTATATT+TGG | 0.134573 | 8_3:-57884283 | Msa1297510:CDS |
| GTCCTTCCCATCATCATATT+TGG | 0.167846 | 8_3:+57883976 | None:intergenic |
| GAAATAGTGGCCAACTGTTT+TGG | 0.272876 | 8_3:+57879440 | None:intergenic |
| AGTGGAATGGCGGTTGCATC+TGG | 0.283682 | 8_3:-57884353 | Msa1297510:exon |
| GTTATAAGCAAGTTTGCTTT+TGG | 0.309186 | 8_3:-57878911 | Msa1297510:three_prime_UTR |
| GTAAGGAGTTGAGCAGTATA+AGG | 0.313569 | 8_3:+57884246 | None:intergenic |
| CAGGCTGGATGTTTATATTT+GGG | 0.326293 | 8_3:-57884282 | Msa1297510:CDS |
| TCTTCGTCATTGTCATTGTT+TGG | 0.328913 | 8_3:+57879405 | None:intergenic |
| TACTGCTAAATGAACGATAA+AGG | 0.355011 | 8_3:+57879054 | None:intergenic |
| GACTTCAACCAAGATGAATT+AGG | 0.355911 | 8_3:-57883941 | Msa1297510:CDS |
| ATCAGGAGACAATAAAAGTA+TGG | 0.360230 | 8_3:-57880167 | Msa1297510:CDS |
| AAAATGCTTGCTCTTTCATC+TGG | 0.365350 | 8_3:-57879859 | Msa1297510:CDS |
| GCCTGTTTGACGGAGTGTTC+TGG | 0.403472 | 8_3:-57880002 | Msa1297510:CDS |
| TGGCGGTTGCATCTGGGATG+AGG | 0.421814 | 8_3:-57884346 | Msa1297510:CDS |
| GTTAGTTAGTTACCTTGCTT+AGG | 0.429764 | 8_3:+57884949 | None:intergenic |
| TATACACATGGCAACACAAT+TGG | 0.430793 | 8_3:+57879296 | None:intergenic |
| ACAAAAGAAAACTTGCATAT+AGG | 0.431167 | 8_3:-57883898 | Msa1297510:CDS |
| TGCAGAAAGGTGTCGAGCTT+GGG | 0.436778 | 8_3:-57884181 | Msa1297510:CDS |
| GTTAAAATTGACCCGCGACC+AGG | 0.438397 | 8_3:-57879492 | Msa1297510:CDS |
| TTGGACAGAACATCAAGAAA+TGG | 0.442699 | 8_3:+57883995 | None:intergenic |
| ACCAGAACACTCCGTCAAAC+AGG | 0.443403 | 8_3:+57880001 | None:intergenic |
| TATATATATGAACCTTATCT+TGG | 0.449587 | 8_3:-57879098 | Msa1297510:three_prime_UTR |
| TCATTTCAGTGTATAGCTCC+TGG | 0.451230 | 8_3:-57879641 | Msa1297510:intron |
| TTCAGCACGGGCCTGTTTGA+CGG | 0.451891 | 8_3:-57880012 | Msa1297510:intron |
| CTGATGAATATACCGACAAA+TGG | 0.459678 | 8_3:-57880125 | Msa1297510:CDS |
| GCCACAACTTAGATGTTAAC+GGG | 0.461271 | 8_3:-57879252 | Msa1297510:three_prime_UTR |
| AACAGACAGGATCACGGAAA+AGG | 0.467858 | 8_3:+57879357 | None:intergenic |
| TGCCACAACTTAGATGTTAA+CGG | 0.467936 | 8_3:-57879253 | Msa1297510:three_prime_UTR |
| TCAATGTTTCCGATGGATCA+AGG | 0.468622 | 8_3:-57879604 | Msa1297510:CDS |
| ATCACACAAAAGCGAACGTT+GGG | 0.471747 | 8_3:+57879567 | None:intergenic |
| GTGCAGAAAGGTGTCGAGCT+TGG | 0.477963 | 8_3:-57884182 | Msa1297510:CDS |
| TAAGGAGTTGAGCAGTATAA+GGG | 0.478805 | 8_3:+57884247 | None:intergenic |
| GATATACCACAGAGAAATAG+TGG | 0.480780 | 8_3:+57879427 | None:intergenic |
| ACCTGATGAAAGCCATTTGT+CGG | 0.482110 | 8_3:+57880113 | None:intergenic |
| AGTGTATAGCTCCTGGGAAG+TGG | 0.483068 | 8_3:-57879634 | Msa1297510:CDS |
| GCAGGGCACAGCTAGGTTAG+TGG | 0.485399 | 8_3:-57884371 | Msa1297510:intron |
| ACCGACAAATGGCTTTCATC+AGG | 0.486588 | 8_3:-57880114 | Msa1297510:intron |
| GTGGAGGGCCTAATTCATCT+TGG | 0.487188 | 8_3:+57883933 | None:intergenic |
| AGTTAGTTACCTTGCTTAGG+TGG | 0.492131 | 8_3:+57884952 | None:intergenic |
| AGCTTAATAACACATGGAAA+TGG | 0.499983 | 8_3:-57879834 | Msa1297510:intron |
| CCAAATATAAACATCCAGCC+TGG | 0.501450 | 8_3:+57884283 | None:intergenic |
| ACAGACAGGATCACGGAAAA+GGG | 0.508964 | 8_3:+57879358 | None:intergenic |
| GGCGGTTGCATCTGGGATGA+GGG | 0.510055 | 8_3:-57884345 | Msa1297510:CDS |
| TTTATCGTTCATTTAGCAGT+AGG | 0.512601 | 8_3:-57879052 | Msa1297510:intron |
| GTGTATAGCTCCTGGGAAGT+GGG | 0.525965 | 8_3:-57879633 | Msa1297510:CDS |
| TGTTGGCATCATCATGTGGA+GGG | 0.526573 | 8_3:+57883918 | None:intergenic |
| GGAAAATTCAATGTTTCCGA+TGG | 0.526933 | 8_3:-57879611 | Msa1297510:CDS |
| GTTCTGTCCAAATATGATGA+TGG | 0.527183 | 8_3:-57883983 | Msa1297510:CDS |
| CGCGACCAGGAAAATCTCAT+AGG | 0.528352 | 8_3:-57879479 | Msa1297510:CDS |
| TTGTGTGATTGGAGATGGAT+GGG | 0.529397 | 8_3:-57879553 | Msa1297510:CDS |
| GGATGAGGGCGGATGAAACA+CGG | 0.531138 | 8_3:-57884331 | Msa1297510:CDS |
| GGTTGAAGTCATAATCAGAT+AGG | 0.531324 | 8_3:+57883954 | None:intergenic |
| CCTGGGATGGATGTTGTCAC+TGG | 0.532753 | 8_3:+57884301 | None:intergenic |
| GGAAAATCTCATAGGTTCCC+TGG | 0.533790 | 8_3:-57879471 | Msa1297510:CDS |
| TTGTTGGCATCATCATGTGG+AGG | 0.540277 | 8_3:+57883917 | None:intergenic |
| AAGCTGCAGAAATCATGAAA+TGG | 0.540685 | 8_3:-57879521 | Msa1297510:CDS |
| GTGGAATGGCGGTTGCATCT+GGG | 0.541648 | 8_3:-57884352 | Msa1297510:exon |
| TGAAACGCTCCTTGATCCAT+CGG | 0.542051 | 8_3:+57879595 | None:intergenic |
| AGTTGAGTCTGTGCTTGTGT+TGG | 0.545298 | 8_3:+57879944 | None:intergenic |
| GTGTCGAGCTTGGGAAGACG+TGG | 0.551286 | 8_3:-57884172 | Msa1297510:CDS |
| TTTCAGACCGTTGAAAGCCT+CGG | 0.551738 | 8_3:+57884208 | None:intergenic |
| CATTTCAGTGTATAGCTCCT+GGG | 0.553970 | 8_3:-57879640 | Msa1297510:intron |
| TGACAACATCCATCCCAGGC+TGG | 0.557450 | 8_3:-57884297 | Msa1297510:CDS |
| CTGGACAGCTTAATAACACA+TGG | 0.559956 | 8_3:-57879840 | Msa1297510:CDS |
| GGATGTTTATATTTGGGACA+TGG | 0.560493 | 8_3:-57884276 | Msa1297510:CDS |
| ATTTAGAAGTAGATGTGGAC+GGG | 0.563466 | 8_3:-57879175 | Msa1297510:three_prime_UTR |
| TATAAACATCCAGCCTGGGA+TGG | 0.563931 | 8_3:+57884288 | None:intergenic |
| GGCATATGATGATTTCAGTA+AGG | 0.564789 | 8_3:+57884229 | None:intergenic |
| TTTGTGTGATTGGAGATGGA+TGG | 0.565338 | 8_3:-57879554 | Msa1297510:CDS |
| ATGAGCTGGTGACCAAGATA+AGG | 0.570199 | 8_3:+57879086 | None:intergenic |
| CACAAATTTAGAAGTAGATG+TGG | 0.570200 | 8_3:-57879180 | Msa1297510:three_prime_UTR |
| GGCCTCACATCCAAAACAGT+TGG | 0.572986 | 8_3:-57879450 | Msa1297510:CDS |
| TTCTGTCCAAATATGATGAT+GGG | 0.586519 | 8_3:-57883982 | Msa1297510:CDS |
| CAAATATAAACATCCAGCCT+GGG | 0.588832 | 8_3:+57884284 | None:intergenic |
| ACCCGTTAACATCTAAGTTG+TGG | 0.593787 | 8_3:+57879251 | None:intergenic |
| CACAAAAGCGAACGTTGGGA+TGG | 0.594094 | 8_3:+57879571 | None:intergenic |
| GGTTGCATCTGGGATGAGGG+CGG | 0.595621 | 8_3:-57884342 | Msa1297510:CDS |
| GATGAGGGCGGATGAAACAC+GGG | 0.597702 | 8_3:-57884330 | Msa1297510:CDS |
| GTCCAAATATGATGATGGGA+AGG | 0.598075 | 8_3:-57883978 | Msa1297510:CDS |
| CCAGTGACAACATCCATCCC+AGG | 0.601396 | 8_3:-57884301 | Msa1297510:CDS |
| TGTATAGCTCCTGGGAAGTG+GGG | 0.615041 | 8_3:-57879632 | Msa1297510:CDS |
| AAAGGTGAGATATGATGAGC+TGG | 0.618326 | 8_3:+57879072 | None:intergenic |
| TATATATTGATGCCATGTGA+TGG | 0.618870 | 8_3:-57879277 | Msa1297510:three_prime_UTR |
| GCACAGCTAGGTTAGTGGAA+TGG | 0.619207 | 8_3:-57884366 | Msa1297510:exon |
| AATCACACAAAAGCGAACGT+TGG | 0.620019 | 8_3:+57879566 | None:intergenic |
| TTGGGCAACAGACAGGATCA+CGG | 0.620213 | 8_3:+57879351 | None:intergenic |
| AATTTAGAAGTAGATGTGGA+CGG | 0.624181 | 8_3:-57879176 | Msa1297510:three_prime_UTR |
| AAGTTGTGGCAGCCATCACA+TGG | 0.624650 | 8_3:+57879265 | None:intergenic |
| GGTCTGAAAGATGTGCAGAA+AGG | 0.625906 | 8_3:-57884194 | Msa1297510:CDS |
| TCATATGCCGAGGCTTTCAA+CGG | 0.629640 | 8_3:-57884215 | Msa1297510:CDS |
| TTCTGGTGAAAATAAAGACG+TGG | 0.641960 | 8_3:-57879985 | Msa1297510:CDS |
| CAGCTAGGTTAGTGGAATGG+CGG | 0.653323 | 8_3:-57884363 | Msa1297510:exon |
| TCTCTGCAACCACCTAAGCA+AGG | 0.661296 | 8_3:-57884961 | Msa1297510:intron |
| ACTGAAATCATCATATGCCG+AGG | 0.664008 | 8_3:-57884225 | Msa1297510:CDS |
| CATCTTATATACATGAGCAG+AGG | 0.677676 | 8_3:+57879132 | None:intergenic |
| AGTTGGCCACTATTTCTCTG+TGG | 0.681956 | 8_3:-57879433 | Msa1297510:CDS |
| CTTGTGATAATAACTGTACG+AGG | 0.682279 | 8_3:+57878955 | None:intergenic |
| TGTCGAGCTTGGGAAGACGT+GGG | 0.694651 | 8_3:-57884171 | Msa1297510:CDS |
| ATGGCATCAATATATACACA+TGG | 0.727755 | 8_3:+57879284 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAATAAAAAATT+GGG | + | chr8_3:57882413-57882432 | None:intergenic | 0.0% |
| !!! | AAACTTATATTTTTAAACAA+GGG | + | chr8_3:57880499-57880518 | None:intergenic | 10.0% |
| !!! | AAATTTTGTATTTATTTCTA+TGG | - | chr8_3:57880942-57880961 | Msa1297510:intron | 10.0% |
| !!! | TCTTTATTTTCTAATATAAT+TGG | + | chr8_3:57882510-57882529 | None:intergenic | 10.0% |
| !! | ATTATATTAGAAAATAAAGA+AGG | - | chr8_3:57882510-57882529 | Msa1297510:intron | 10.0% |
| !!! | ATTATGATTATTGATTCAAA+TGG | + | chr8_3:57880392-57880411 | None:intergenic | 15.0% |
| !!! | GAAACTTATATTTTTAAACA+AGG | + | chr8_3:57880500-57880519 | None:intergenic | 15.0% |
| !!! | TTTCTAAAACATGATATTTT+TGG | - | chr8_3:57880516-57880535 | Msa1297510:intron | 15.0% |
| !!! | TTTTTACTTATCTATTATAC+TGG | - | chr8_3:57880577-57880596 | Msa1297510:intron | 15.0% |
| !!! | TATTTTCTAATATAATTGGA+AGG | + | chr8_3:57882506-57882525 | None:intergenic | 15.0% |
| !!! | ATTTGAAACAATTATGATAT+TGG | - | chr8_3:57883264-57883283 | Msa1297510:intron | 15.0% |
| !!! | TTTACATAATATTTTAGATC+AGG | - | chr8_3:57883738-57883757 | Msa1297510:intron | 15.0% |
| !! | TAAATATAACTAATACATAC+AGG | + | chr8_3:57883875-57883894 | None:intergenic | 15.0% |
| !! | AACTAGTAATCATATTATAT+TGG | - | chr8_3:57884196-57884215 | Msa1297510:CDS | 15.0% |
| !! | ACTAGTAATCATATTATATT+GGG | - | chr8_3:57884197-57884216 | Msa1297510:CDS | 15.0% |
| !! | AGTTAAAGCAAGATATAATT+AGG | + | chr8_3:57879270-57879289 | None:intergenic | 20.0% |
| !! | ATAATGATGTCAATATTGAA+TGG | - | chr8_3:57879478-57879497 | Msa1297510:CDS | 20.0% |
| !! | CATAAAAGGAAACAATTATA+TGG | + | chr8_3:57880475-57880494 | None:intergenic | 20.0% |
| !!! | ATGATATTTTTGGTTTTACA+AGG | - | chr8_3:57880526-57880545 | Msa1297510:intron | 20.0% |
| !! | ACCATAATGTAATGTATATA+TGG | - | chr8_3:57880616-57880635 | Msa1297510:intron | 20.0% |
| !! | AATATACTAAGACAACATAT+AGG | + | chr8_3:57880982-57881001 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAACAGGATTCTA+TGG | + | chr8_3:57881486-57881505 | None:intergenic | 20.0% |
| !! | GAATCCTGTTAAAAAAATAA+CGG | - | chr8_3:57881488-57881507 | Msa1297510:intron | 20.0% |
| !! | AACATTACCTTAAAAAGTAA+AGG | - | chr8_3:57882081-57882100 | Msa1297510:intron | 20.0% |
| !! | ACATTACCTTAAAAAGTAAA+GGG | - | chr8_3:57882082-57882101 | Msa1297510:intron | 20.0% |
| !!! | AAAAGATTTTTTTTAACCTC+CGG | + | chr8_3:57882367-57882386 | None:intergenic | 20.0% |
| !!! | ATGATTATTGACTTCATAAA+AGG | + | chr8_3:57882449-57882468 | None:intergenic | 20.0% |
| !! | TAATGAAGATAAACAGATAT+TGG | + | chr8_3:57882556-57882575 | None:intergenic | 20.0% |
| !! | GTATCAGTATGAATAAAAAA+AGG | - | chr8_3:57882605-57882624 | Msa1297510:intron | 20.0% |
| !! | GGAATAATTATTGTTCAAAT+TGG | - | chr8_3:57882626-57882645 | Msa1297510:intron | 20.0% |
| !!! | AAGCACACTTTTTATTTTAA+GGG | + | chr8_3:57883038-57883057 | None:intergenic | 20.0% |
| !!! | TAAGCACACTTTTTATTTTA+AGG | + | chr8_3:57883039-57883058 | None:intergenic | 20.0% |
| !!! | GAATAAAAAGCACTAATTAA+TGG | - | chr8_3:57883239-57883258 | Msa1297510:intron | 20.0% |
| !! | ACTTACTATAAAAGCTTATT+AGG | + | chr8_3:57883535-57883554 | None:intergenic | 20.0% |
| !! | TTAAATGAAGTAAACTTGTA+TGG | + | chr8_3:57883683-57883702 | None:intergenic | 20.0% |
| !! | ATACAAGTTTACTTCATTTA+AGG | - | chr8_3:57883682-57883701 | Msa1297510:intron | 20.0% |
| !!! | ATATGATTACTAGTTTTGAA+TGG | + | chr8_3:57884191-57884210 | None:intergenic | 20.0% |
| !! | CTAGTAATCATATTATATTG+GGG | - | chr8_3:57884198-57884217 | Msa1297510:CDS | 20.0% |
| !!! | TGAACTATTTTTATATGACA+TGG | - | chr8_3:57884710-57884729 | Msa1297510:intron | 20.0% |
| !! | TATATATATGAACCTTATCT+TGG | - | chr8_3:57884824-57884843 | Msa1297510:intron | 20.0% |
| ! | AAAAGTTGAAAATCACGATA+TGG | + | chr8_3:57879036-57879055 | None:intergenic | 25.0% |
| ! | CAGTTGAAAGAATAATTCAA+CGG | + | chr8_3:57879173-57879192 | None:intergenic | 25.0% |
| ! | TTGAATTATTCTTTCAACTG+AGG | - | chr8_3:57879173-57879192 | Msa1297510:three_prime_UTR | 25.0% |
| !!! | ATTATAGTTTTTTAGCTCAG+CGG | - | chr8_3:57879407-57879426 | Msa1297510:CDS | 25.0% |
| ! | TCAATATTGACATCATTATC+CGG | + | chr8_3:57879477-57879496 | None:intergenic | 25.0% |
| !! | TCTTGTTCAAATATTTTCCA+TGG | - | chr8_3:57879835-57879854 | Msa1297510:CDS | 25.0% |
| !! | ATATGCAAGTTTTCTTTTGT+TGG | + | chr8_3:57880024-57880043 | None:intergenic | 25.0% |
| ! | ACAAAAGAAAACTTGCATAT+AGG | - | chr8_3:57880024-57880043 | Msa1297510:intron | 25.0% |
| ! | ATAAATGAATCAATTTCAGG+AGG | + | chr8_3:57880188-57880207 | None:intergenic | 25.0% |
| ! | CAGATAAATGAATCAATTTC+AGG | + | chr8_3:57880191-57880210 | None:intergenic | 25.0% |
| ! | AATGAACGAAATGTATAAAG+GGG | + | chr8_3:57880369-57880388 | None:intergenic | 25.0% |
| ! | GAATGAACGAAATGTATAAA+GGG | + | chr8_3:57880370-57880389 | None:intergenic | 25.0% |
| !! | TTTTAAACAAGGGTCATAAA+AGG | + | chr8_3:57880489-57880508 | None:intergenic | 25.0% |
| !! | ATTATGGTTTTCTAGATAGT+AGG | + | chr8_3:57880604-57880623 | None:intergenic | 25.0% |
| ! | GCCATATATACATTACATTA+TGG | + | chr8_3:57880620-57880639 | None:intergenic | 25.0% |
| ! | TAATGTATATATGGCTGAAA+TGG | - | chr8_3:57880625-57880644 | Msa1297510:intron | 25.0% |
| ! | CAGCTATCTAAATTAAGATT+AGG | + | chr8_3:57880759-57880778 | None:intergenic | 25.0% |
| ! | AGAAATAAACAAGTTATGAC+AGG | + | chr8_3:57880860-57880879 | None:intergenic | 25.0% |
| !!! | TATTTCTAGTATGTGATGAA+TGG | - | chr8_3:57880873-57880892 | Msa1297510:intron | 25.0% |
| !!! | CATGTTTTAGGTAAAATGAA+GGG | + | chr8_3:57881064-57881083 | None:intergenic | 25.0% |
| !!! | TCATGTTTTAGGTAAAATGA+AGG | + | chr8_3:57881065-57881084 | None:intergenic | 25.0% |
| !! | TGTCAACATTTTCATGTTTT+AGG | + | chr8_3:57881076-57881095 | None:intergenic | 25.0% |
| ! | CCTTTACTATATCTTCAATA+TGG | + | chr8_3:57881179-57881198 | None:intergenic | 25.0% |
| ! | CCATATTGAAGATATAGTAA+AGG | - | chr8_3:57881176-57881195 | Msa1297510:intron | 25.0% |
| !!! | TGTTCCGTTATTTTTTTAAC+AGG | + | chr8_3:57881495-57881514 | None:intergenic | 25.0% |
| ! | ACTCTTCTCAAAATATCAAA+AGG | + | chr8_3:57881716-57881735 | None:intergenic | 25.0% |
| !!! | TATGTACCCTTTACTTTTTA+AGG | + | chr8_3:57882091-57882110 | None:intergenic | 25.0% |
| !!! | CTATTTTTCTTACGTGATTT+AGG | + | chr8_3:57882284-57882303 | None:intergenic | 25.0% |
| !! | TCTTCGTTTTGTATAAATAC+CGG | - | chr8_3:57882345-57882364 | Msa1297510:intron | 25.0% |
| ! | TGCTTATTATGGAAATATGT+AGG | + | chr8_3:57882656-57882675 | None:intergenic | 25.0% |
| ! | ATATTTCCATAATAAGCATC+AGG | - | chr8_3:57882658-57882677 | Msa1297510:intron | 25.0% |
| ! | TCTTAAAAACGTTAGTTGTT+GGG | + | chr8_3:57882773-57882792 | None:intergenic | 25.0% |
| ! | ATCTTAAAAACGTTAGTTGT+TGG | + | chr8_3:57882774-57882793 | None:intergenic | 25.0% |
| ! | ACCCAACAACTATAAAAATA+GGG | - | chr8_3:57882802-57882821 | Msa1297510:intron | 25.0% |
| ! | ACATAGGGCTATTAAAATAA+AGG | - | chr8_3:57882958-57882977 | Msa1297510:intron | 25.0% |
| ! | TATGAAAGGACATTTACATT+TGG | - | chr8_3:57883394-57883413 | Msa1297510:intron | 25.0% |
| ! | ATGAAAGGACATTTACATTT+GGG | - | chr8_3:57883395-57883414 | Msa1297510:intron | 25.0% |
| ! | TATTGAGACTTAAAGAGTTA+TGG | - | chr8_3:57883652-57883671 | Msa1297510:intron | 25.0% |
| !!! | TATTTTTATATGACATGGCT+GGG | - | chr8_3:57884715-57884734 | Msa1297510:intron | 25.0% |
| TATAGTTACAGTTGAAGAGA+TGG | + | chr8_3:57879010-57879029 | None:intergenic | 30.0% | |
| ! | CTTGCTTTAACTTTCTACAT+AGG | - | chr8_3:57879278-57879297 | Msa1297510:three_prime_UTR | 30.0% |
| TCAATCTGCAAAACAAAAAC+CGG | + | chr8_3:57879894-57879913 | None:intergenic | 30.0% | |
| TTCTGTCCAAATATGATGAT+GGG | - | chr8_3:57879940-57879959 | Msa1297510:CDS | 30.0% | |
| ! | TGTTACCTGCAAGTATTTTT+GGG | + | chr8_3:57880063-57880082 | None:intergenic | 30.0% |
| ATTGCTAAAGTCCATAACAT+GGG | - | chr8_3:57880128-57880147 | Msa1297510:CDS | 30.0% | |
| AACAAGAATATCCCATGTTA+TGG | + | chr8_3:57880142-57880161 | None:intergenic | 30.0% | |
| TAGTCAGTTAGTCAAATAGT+TGG | - | chr8_3:57880273-57880292 | Msa1297510:intron | 30.0% | |
| GGAATGAACGAAATGTATAA+AGG | + | chr8_3:57880371-57880390 | None:intergenic | 30.0% | |
| AACTTCCAAAACATAGTGTT+TGG | - | chr8_3:57880718-57880737 | Msa1297510:intron | 30.0% | |
| AGTTATGACAGGAAAATGAA+TGG | + | chr8_3:57880849-57880868 | None:intergenic | 30.0% | |
| ! | TCTTAGTATATTTGCTGAGT+TGG | - | chr8_3:57880990-57881009 | Msa1297510:intron | 30.0% |
| AAGTAAAAGTTGACAGAAGA+AGG | - | chr8_3:57881247-57881266 | Msa1297510:intron | 30.0% | |
| GGAATAATCTAATCTTCGTA+TGG | + | chr8_3:57881402-57881421 | None:intergenic | 30.0% | |
| ATTCAAACTTAGGATTCTAG+TGG | + | chr8_3:57881676-57881695 | None:intergenic | 30.0% | |
| ACTAGAATCCTAAGTTTGAA+TGG | - | chr8_3:57881675-57881694 | Msa1297510:intron | 30.0% | |
| CTAGAATCCTAAGTTTGAAT+GGG | - | chr8_3:57881676-57881695 | Msa1297510:intron | 30.0% | |
| !! | GTTTGTTGCTCAAATTTTCA+GGG | + | chr8_3:57882148-57882167 | None:intergenic | 30.0% |
| !!! | AGTTTGTTGCTCAAATTTTC+AGG | + | chr8_3:57882149-57882168 | None:intergenic | 30.0% |
| GCAAAACAGATCATCAAAAT+TGG | - | chr8_3:57882307-57882326 | Msa1297510:intron | 30.0% | |
| ATAAACAGATATTGGTGCAA+TGG | + | chr8_3:57882548-57882567 | None:intergenic | 30.0% | |
| TTCATACCTGATGCTTATTA+TGG | + | chr8_3:57882667-57882686 | None:intergenic | 30.0% | |
| TGTGTCATATTGACAATCAT+TGG | + | chr8_3:57882705-57882724 | None:intergenic | 30.0% | |
| CACCCAACAACTATAAAAAT+AGG | - | chr8_3:57882801-57882820 | Msa1297510:intron | 30.0% | |
| !!! | CCCCTATTTTTATAGTTGTT+GGG | + | chr8_3:57882806-57882825 | None:intergenic | 30.0% |
| CCCAACAACTATAAAAATAG+GGG | - | chr8_3:57882803-57882822 | Msa1297510:intron | 30.0% | |
| CCAACAACTATAAAAATAGG+GGG | - | chr8_3:57882804-57882823 | Msa1297510:intron | 30.0% | |
| ATAAAAATAGGGGGAATACT+TGG | - | chr8_3:57882813-57882832 | Msa1297510:intron | 30.0% | |
| TAAAAATAGGGGGAATACTT+GGG | - | chr8_3:57882814-57882833 | Msa1297510:intron | 30.0% | |
| !! | TTCCCAATTACTTTTCACAT+AGG | - | chr8_3:57882942-57882961 | Msa1297510:intron | 30.0% |
| !! | TCCCAATTACTTTTCACATA+GGG | - | chr8_3:57882943-57882962 | Msa1297510:intron | 30.0% |
| AAAATAAAGGTCATGCTAAC+CGG | - | chr8_3:57882971-57882990 | Msa1297510:intron | 30.0% | |
| TATATTGCATGAAGAAAGTG+TGG | - | chr8_3:57883116-57883135 | Msa1297510:intron | 30.0% | |
| AAACAAAAGATTAACAGTGG+CGG | + | chr8_3:57883153-57883172 | None:intergenic | 30.0% | |
| AAGGATTGCTTAAGACATTA+AGG | - | chr8_3:57883344-57883363 | Msa1297510:intron | 30.0% | |
| AGGATTGCTTAAGACATTAA+GGG | - | chr8_3:57883345-57883364 | Msa1297510:intron | 30.0% | |
| ACTCAATTAAGGCTTATGAA+AGG | - | chr8_3:57883380-57883399 | Msa1297510:intron | 30.0% | |
| GGAAAAACCAAAAGCTATTA+GGG | - | chr8_3:57883493-57883512 | Msa1297510:intron | 30.0% | |
| !!! | GGTAATTTGTTTTCTAACGA+TGG | - | chr8_3:57883594-57883613 | Msa1297510:intron | 30.0% |
| ATTATGTAAACCCTGAAACA+AGG | + | chr8_3:57883728-57883747 | None:intergenic | 30.0% | |
| ATCAGGAGACAATAAAAGTA+TGG | - | chr8_3:57883755-57883774 | Msa1297510:intron | 30.0% | |
| AGCTTAATAACACATGGAAA+TGG | - | chr8_3:57884088-57884107 | Msa1297510:intron | 30.0% | |
| TGAATGGTTTGAAAGATGTT+TGG | + | chr8_3:57884175-57884194 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCCTTCCCTTTTTT+GGG | + | chr8_3:57884592-57884611 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCCTTCCCTTTTT+TGG | + | chr8_3:57884593-57884612 | None:intergenic | 30.0% |
| ATGGCATCAATATATACACA+TGG | + | chr8_3:57884641-57884660 | None:intergenic | 30.0% | |
| TATATATTGATGCCATGTGA+TGG | - | chr8_3:57884645-57884664 | Msa1297510:intron | 30.0% | |
| !!! | CTATTTTTATATGACATGGC+TGG | - | chr8_3:57884714-57884733 | Msa1297510:intron | 30.0% |
| CACAAATTTAGAAGTAGATG+TGG | - | chr8_3:57884742-57884761 | Msa1297510:intron | 30.0% | |
| AATTTAGAAGTAGATGTGGA+CGG | - | chr8_3:57884746-57884765 | Msa1297510:intron | 30.0% | |
| TACTGCTAAATGAACGATAA+AGG | + | chr8_3:57884871-57884890 | None:intergenic | 30.0% | |
| TTTATCGTTCATTTAGCAGT+AGG | - | chr8_3:57884870-57884889 | Msa1297510:intron | 30.0% | |
| ! | TACTATTAGCCTAAACCAAA+TGG | - | chr8_3:57884907-57884926 | Msa1297510:intron | 30.0% |
| ! | AACGAATTTCCATTTGGTTT+AGG | + | chr8_3:57884919-57884938 | None:intergenic | 30.0% |
| !! | GTTATAAGCAAGTTTGCTTT+TGG | - | chr8_3:57885011-57885030 | Msa1297510:five_prime_UTR | 30.0% |
| GTTAGTTAGTTACCTTGCTT+AGG | + | chr8_3:57878976-57878995 | None:intergenic | 35.0% | |
| GCAACTATCAACAATACACA+AGG | + | chr8_3:57879359-57879378 | None:intergenic | 35.0% | |
| !! | TGTATTGTTGATAGTTGCAG+TGG | - | chr8_3:57879361-57879380 | Msa1297510:three_prime_UTR | 35.0% |
| CTATAATGACTATAGAGCTG+CGG | + | chr8_3:57879394-57879413 | None:intergenic | 35.0% | |
| CAAATATAAACATCCAGCCT+GGG | + | chr8_3:57879641-57879660 | None:intergenic | 35.0% | |
| CAGGCTGGATGTTTATATTT+GGG | - | chr8_3:57879640-57879659 | Msa1297510:intron | 35.0% | |
| ! | GGATGTTTATATTTGGGACA+TGG | - | chr8_3:57879646-57879665 | Msa1297510:intron | 35.0% |
| TAAGGAGTTGAGCAGTATAA+GGG | + | chr8_3:57879678-57879697 | None:intergenic | 35.0% | |
| GGCATATGATGATTTCAGTA+AGG | + | chr8_3:57879696-57879715 | None:intergenic | 35.0% | |
| CCACAACTAAAAACAATCCA+TGG | + | chr8_3:57879855-57879874 | None:intergenic | 35.0% | |
| !!! | CCATGGATTGTTTTTAGTTG+TGG | - | chr8_3:57879852-57879871 | Msa1297510:CDS | 35.0% |
| TTAGTTGTGGAGAGTTAGTT+TGG | - | chr8_3:57879865-57879884 | Msa1297510:CDS | 35.0% | |
| TTGGACAGAACATCAAGAAA+TGG | + | chr8_3:57879930-57879949 | None:intergenic | 35.0% | |
| GTTCTGTCCAAATATGATGA+TGG | - | chr8_3:57879939-57879958 | Msa1297510:CDS | 35.0% | |
| GGTTGAAGTCATAATCAGAT+AGG | + | chr8_3:57879971-57879990 | None:intergenic | 35.0% | |
| GACTTCAACCAAGATGAATT+AGG | - | chr8_3:57879981-57880000 | Msa1297510:CDS | 35.0% | |
| TATAGCCCAAAAATACTTGC+AGG | - | chr8_3:57880055-57880074 | Msa1297510:intron | 35.0% | |
| ! | GTGTTACCTGCAAGTATTTT+TGG | + | chr8_3:57880064-57880083 | None:intergenic | 35.0% |
| !! | TAACACTTCTGGAGCATTAT+CGG | - | chr8_3:57880078-57880097 | Msa1297510:intron | 35.0% |
| CATTGCTAAAGTCCATAACA+TGG | - | chr8_3:57880127-57880146 | Msa1297510:CDS | 35.0% | |
| ! | TACGCTTCATGTTTTCTTGA+TGG | - | chr8_3:57880217-57880236 | Msa1297510:intron | 35.0% |
| !! | TTCATGTTTTCTTGATGGAC+TGG | - | chr8_3:57880222-57880241 | Msa1297510:intron | 35.0% |
| !! | CTGGTTTGGTATATACTACA+TGG | - | chr8_3:57880241-57880260 | Msa1297510:intron | 35.0% |
| ! | ACACTCCAAACACTATGTTT+TGG | + | chr8_3:57880726-57880745 | None:intergenic | 35.0% |
| !! | GTGTTTGGAGTGTTATTTGT+AGG | - | chr8_3:57880733-57880752 | Msa1297510:intron | 35.0% |
| !! | GTTTTAGGTAAAATGAAGGG+AGG | + | chr8_3:57881061-57881080 | None:intergenic | 35.0% |
| GTTGACAATTCATCAAGACA+TGG | - | chr8_3:57881105-57881124 | Msa1297510:intron | 35.0% | |
| ! | AGCTTAGGAAATTTGGTGAT+TGG | - | chr8_3:57881130-57881149 | Msa1297510:intron | 35.0% |
| ACAGAAGAAGGTAAGATGAA+GGG | - | chr8_3:57881259-57881278 | Msa1297510:intron | 35.0% | |
| ATACACTATGAGCACTTGTA+TGG | + | chr8_3:57881364-57881383 | None:intergenic | 35.0% | |
| ! | GAAGCACTTGTAATACACTA+TGG | + | chr8_3:57881436-57881455 | None:intergenic | 35.0% |
| CAAAGTTTCAAACAAGTGCT+CGG | - | chr8_3:57881290-57881309 | Msa1297510:intron | 35.0% | |
| CTCTTTGCTCTTAAGAATGT+GGG | + | chr8_3:57881589-57881608 | None:intergenic | 35.0% | |
| ACTCTTTGCTCTTAAGAATG+TGG | + | chr8_3:57881590-57881609 | None:intergenic | 35.0% | |
| CATTCTTAAGAGCAAAGAGT+CGG | - | chr8_3:57881590-57881609 | Msa1297510:intron | 35.0% | |
| ATTCTTAAGAGCAAAGAGTC+GGG | - | chr8_3:57881591-57881610 | Msa1297510:intron | 35.0% | |
| TTGGAATCCCATTCAAACTT+AGG | + | chr8_3:57881686-57881705 | None:intergenic | 35.0% | |
| !! | AATATCAAAAGGCTCTGAGT+TGG | + | chr8_3:57881705-57881724 | None:intergenic | 35.0% |
| !! | TTTTGAGAAGAGTTGCTCTT+TGG | - | chr8_3:57881723-57881742 | Msa1297510:intron | 35.0% |
| AGTAGTGTATTATGAGTCTC+AGG | + | chr8_3:57881831-57881850 | None:intergenic | 35.0% | |
| TTGTTGCACTGAAGTATGAA+CGG | + | chr8_3:57881995-57882014 | None:intergenic | 35.0% | |
| CATACTTCAGTGCAACAATT+CGG | - | chr8_3:57881997-57882016 | Msa1297510:intron | 35.0% | |
| ! | CTCTACCCAAACTTTTCATT+AGG | - | chr8_3:57882119-57882138 | Msa1297510:intron | 35.0% |
| GGAAGCCTAATGAAAAGTTT+GGG | + | chr8_3:57882127-57882146 | None:intergenic | 35.0% | |
| ! | TCGTTTTGTATAAATACCGG+AGG | - | chr8_3:57882348-57882367 | Msa1297510:intron | 35.0% |
| AAACGTTAGTTGTTGGGTAA+TGG | + | chr8_3:57882767-57882786 | None:intergenic | 35.0% | |
| !!! | CCCCCTATTTTTATAGTTGT+TGG | + | chr8_3:57882807-57882826 | None:intergenic | 35.0% |
| CAAAACGTGATGAAATTGCT+TGG | + | chr8_3:57882921-57882940 | None:intergenic | 35.0% | |
| GCCCTATGTGAAAAGTAATT+GGG | + | chr8_3:57882947-57882966 | None:intergenic | 35.0% | |
| AGCCCTATGTGAAAAGTAAT+TGG | + | chr8_3:57882948-57882967 | None:intergenic | 35.0% | |
| AAAGATGTGAGCAAAGGTTA+AGG | + | chr8_3:57883090-57883109 | None:intergenic | 35.0% | |
| AACAAAAGATTAACAGTGGC+GGG | + | chr8_3:57883152-57883171 | None:intergenic | 35.0% | |
| GGCAAACAAAAGATTAACAG+TGG | + | chr8_3:57883156-57883175 | None:intergenic | 35.0% | |
| AAAGTGTGTTATGCAAGCTA+AGG | + | chr8_3:57883323-57883342 | None:intergenic | 35.0% | |
| ! | GCTTGCATAACACACTTTTA+AGG | - | chr8_3:57883325-57883344 | Msa1297510:intron | 35.0% |
| ATTGCTTAAGACATTAAGGG+AGG | - | chr8_3:57883348-57883367 | Msa1297510:intron | 35.0% | |
| !! | CACACTTTTAAGGATTGCTT+AGG | - | chr8_3:57883335-57883354 | Msa1297510:intron | 35.0% |
| !! | ACTTTTAAGGATTGCTTAGG+AGG | - | chr8_3:57883471-57883490 | Msa1297510:intron | 35.0% |
| !! | CTTTTAAGGATTGCTTAGGA+GGG | - | chr8_3:57883472-57883491 | Msa1297510:intron | 35.0% |
| GGGAAAAACCAAAAGCTATT+AGG | - | chr8_3:57883492-57883511 | Msa1297510:intron | 35.0% | |
| ! | TGCTAAACCCTAATAGCTTT+TGG | + | chr8_3:57883503-57883522 | None:intergenic | 35.0% |
| CATCTCCTATCTATAAGCAA+AGG | + | chr8_3:57883575-57883594 | None:intergenic | 35.0% | |
| CTTTGCTTATAGATAGGAGA+TGG | - | chr8_3:57883573-57883592 | Msa1297510:intron | 35.0% | |
| ! | ATATTCTCTCTCCTTGTTTC+AGG | - | chr8_3:57883714-57883733 | Msa1297510:intron | 35.0% |
| ! | TATTCTCTCTCCTTGTTTCA+GGG | - | chr8_3:57883715-57883734 | Msa1297510:intron | 35.0% |
| CTGATGAATATACCGACAAA+TGG | - | chr8_3:57883797-57883816 | Msa1297510:intron | 35.0% | |
| TTCTGGTGAAAATAAAGACG+TGG | - | chr8_3:57883937-57883956 | Msa1297510:CDS | 35.0% | |
| !!! | GTGAATGTTTTAGTTACAGC+TGG | - | chr8_3:57884019-57884038 | Msa1297510:intron | 35.0% |
| ! | AGCAAGCATTTTACAAGAGA+TGG | + | chr8_3:57884055-57884074 | None:intergenic | 35.0% |
| AAAATGCTTGCTCTTTCATC+TGG | - | chr8_3:57884063-57884082 | Msa1297510:intron | 35.0% | |
| GGAAAATTCAATGTTTCCGA+TGG | - | chr8_3:57884311-57884330 | Msa1297510:CDS | 35.0% | |
| AAGCTGCAGAAATCATGAAA+TGG | - | chr8_3:57884401-57884420 | Msa1297510:intron | 35.0% | |
| GATATACCACAGAGAAATAG+TGG | + | chr8_3:57884498-57884517 | None:intergenic | 35.0% | |
| TCTTCGTCATTGTCATTGTT+TGG | + | chr8_3:57884520-57884539 | None:intergenic | 35.0% | |
| TATACACATGGCAACACAAT+TGG | + | chr8_3:57884629-57884648 | None:intergenic | 35.0% | |
| TGCCACAACTTAGATGTTAA+CGG | - | chr8_3:57884669-57884688 | Msa1297510:intron | 35.0% | |
| ATTTAGAAGTAGATGTGGAC+GGG | - | chr8_3:57884747-57884766 | Msa1297510:intron | 35.0% | |
| CATCTTATATACATGAGCAG+AGG | + | chr8_3:57884793-57884812 | None:intergenic | 35.0% | |
| TTCATTTAGCAGTAGGAATG+TGG | - | chr8_3:57884877-57884896 | Msa1297510:intron | 35.0% | |
| TCATTTAGCAGTAGGAATGT+GGG | - | chr8_3:57884878-57884897 | Msa1297510:intron | 35.0% | |
| CAGATGAACGAATTTCCATT+TGG | + | chr8_3:57884925-57884944 | None:intergenic | 35.0% | |
| CTTGTGATAATAACTGTACG+AGG | + | chr8_3:57884970-57884989 | None:intergenic | 35.0% | |
| AGTTAGTTACCTTGCTTAGG+TGG | + | chr8_3:57878973-57878992 | None:intergenic | 40.0% | |
| CGATATGTGTTTGACAACAC+CGG | - | chr8_3:57879455-57879474 | Msa1297510:CDS | 40.0% | |
| TAACATTGTGCAATGAGTCG+TGG | - | chr8_3:57879519-57879538 | Msa1297510:CDS | 40.0% | |
| CCAAATATAAACATCCAGCC+TGG | + | chr8_3:57879642-57879661 | None:intergenic | 40.0% | |
| CCAGGCTGGATGTTTATATT+TGG | - | chr8_3:57879639-57879658 | Msa1297510:intron | 40.0% | |
| GTAAGGAGTTGAGCAGTATA+AGG | + | chr8_3:57879679-57879698 | None:intergenic | 40.0% | |
| ACTGAAATCATCATATGCCG+AGG | - | chr8_3:57879697-57879716 | Msa1297510:intron | 40.0% | |
| !! | GTCCAAATATGATGATGGGA+AGG | - | chr8_3:57879944-57879963 | Msa1297510:CDS | 40.0% |
| GTCCTTCCCATCATCATATT+TGG | + | chr8_3:57879949-57879968 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGCATCATCATG+TGG | + | chr8_3:57880011-57880030 | None:intergenic | 40.0% |
| ATACTTGCAGGTAACACTTC+TGG | - | chr8_3:57880067-57880086 | Msa1297510:intron | 40.0% | |
| !!! | GTTTTCTTGATGGACTGGTT+TGG | - | chr8_3:57880227-57880246 | Msa1297510:intron | 40.0% |
| ATTTAGATAGCTGCGAACCT+AGG | - | chr8_3:57880766-57880785 | Msa1297510:intron | 40.0% | |
| TTTAGATAGCTGCGAACCTA+GGG | - | chr8_3:57880767-57880786 | Msa1297510:intron | 40.0% | |
| TGAGTTGCAAAACTTGCAAG+TGG | - | chr8_3:57880819-57880838 | Msa1297510:intron | 40.0% | |
| CATGGCAAGCTTAGGAAATT+TGG | - | chr8_3:57881123-57881142 | Msa1297510:intron | 40.0% | |
| GACAGAAGAAGGTAAGATGA+AGG | - | chr8_3:57881258-57881277 | Msa1297510:intron | 40.0% | |
| TACACTATGGCTCAGAGTTA+TGG | + | chr8_3:57881423-57881442 | None:intergenic | 40.0% | |
| TTAACTGTTCAACCTGAGAG+CGG | + | chr8_3:57881528-57881547 | None:intergenic | 40.0% | |
| !! | CTCTCAGGTTGAACAGTTAA+GGG | - | chr8_3:57881528-57881547 | Msa1297510:intron | 40.0% |
| GAAGGGTTATTGTCTATCGT+TGG | - | chr8_3:57881781-57881800 | Msa1297510:intron | 40.0% | |
| TGAAAAGTTTGGGTAGAGCA+CGG | + | chr8_3:57882117-57882136 | None:intergenic | 40.0% | |
| GGGAAGCCTAATGAAAAGTT+TGG | + | chr8_3:57882128-57882147 | None:intergenic | 40.0% | |
| ! | TCATAAAAGGTACATGTGCG+AGG | + | chr8_3:57882436-57882455 | None:intergenic | 40.0% |
| TAATGTTAACCAGTGCCCTT+GGG | + | chr8_3:57883015-57883034 | None:intergenic | 40.0% | |
| TGATGCAAAGATGTGAGCAA+AGG | + | chr8_3:57883096-57883115 | None:intergenic | 40.0% | |
| ACAAAAGATTAACAGTGGCG+GGG | + | chr8_3:57883151-57883170 | None:intergenic | 40.0% | |
| ! | GAGTCGTGAAACAATTTTGC+AGG | + | chr8_3:57883177-57883196 | None:intergenic | 40.0% |
| AAGACATTAAGGGAGGTAGT+TGG | - | chr8_3:57883355-57883374 | Msa1297510:intron | 40.0% | |
| GGTAGTTGGCAACTCAATTA+AGG | - | chr8_3:57883369-57883388 | Msa1297510:intron | 40.0% | |
| ! | GCTTGCGTAACACACTTTTA+AGG | - | chr8_3:57883458-57883477 | Msa1297510:intron | 40.0% |
| ACCAGCCTTTGCTTATAGAT+AGG | - | chr8_3:57883567-57883586 | Msa1297510:intron | 40.0% | |
| TCCTATCTATAAGCAAAGGC+TGG | + | chr8_3:57883571-57883590 | None:intergenic | 40.0% | |
| ACCTGATGAAAGCCATTTGT+CGG | + | chr8_3:57883812-57883831 | None:intergenic | 40.0% | |
| CTGGACAGCTTAATAACACA+TGG | - | chr8_3:57884082-57884101 | Msa1297510:intron | 40.0% | |
| TCATTTCAGTGTATAGCTCC+TGG | - | chr8_3:57884281-57884300 | Msa1297510:CDS | 40.0% | |
| CATTTCAGTGTATAGCTCCT+GGG | - | chr8_3:57884282-57884301 | Msa1297510:CDS | 40.0% | |
| TCAATGTTTCCGATGGATCA+AGG | - | chr8_3:57884318-57884337 | Msa1297510:CDS | 40.0% | |
| ATCACACAAAAGCGAACGTT+GGG | + | chr8_3:57884358-57884377 | None:intergenic | 40.0% | |
| AATCACACAAAAGCGAACGT+TGG | + | chr8_3:57884359-57884378 | None:intergenic | 40.0% | |
| !! | AACGTTCGCTTTTGTGTGAT+TGG | - | chr8_3:57884358-57884377 | Msa1297510:exon | 40.0% |
| TTTGTGTGATTGGAGATGGA+TGG | - | chr8_3:57884368-57884387 | Msa1297510:exon | 40.0% | |
| TTGTGTGATTGGAGATGGAT+GGG | - | chr8_3:57884369-57884388 | Msa1297510:exon | 40.0% | |
| !! | CGCGGGTCAATTTTAACAAA+CGG | + | chr8_3:57884427-57884446 | None:intergenic | 40.0% |
| ! | GAAATAGTGGCCAACTGTTT+TGG | + | chr8_3:57884485-57884504 | None:intergenic | 40.0% |
| GGGAAAAAAAAACAGCAGCA+TGG | - | chr8_3:57884603-57884622 | Msa1297510:intron | 40.0% | |
| GCCACAACTTAGATGTTAAC+GGG | - | chr8_3:57884670-57884689 | Msa1297510:intron | 40.0% | |
| ACCCGTTAACATCTAAGTTG+TGG | + | chr8_3:57884674-57884693 | None:intergenic | 40.0% | |
| AAAGGTGAGATATGATGAGC+TGG | + | chr8_3:57884853-57884872 | None:intergenic | 40.0% | |
| AAATTCGTTCATCTGCAGTC+TGG | - | chr8_3:57884930-57884949 | Msa1297510:intron | 40.0% | |
| ! | AGTCGTGGTGTTTTTCTGCA+GGG | - | chr8_3:57879534-57879553 | Msa1297510:CDS | 45.0% |
| TATAAACATCCAGCCTGGGA+TGG | + | chr8_3:57879637-57879656 | None:intergenic | 45.0% | |
| TCATATGCCGAGGCTTTCAA+CGG | - | chr8_3:57879707-57879726 | Msa1297510:intron | 45.0% | |
| TTTCAGACCGTTGAAAGCCT+CGG | + | chr8_3:57879717-57879736 | None:intergenic | 45.0% | |
| GGTCTGAAAGATGTGCAGAA+AGG | - | chr8_3:57879728-57879747 | Msa1297510:intron | 45.0% | |
| !! | TGGAGAGTTAGTTTGGTGTC+CGG | - | chr8_3:57879872-57879891 | Msa1297510:CDS | 45.0% |
| TGTTGGCATCATCATGTGGA+GGG | + | chr8_3:57880007-57880026 | None:intergenic | 45.0% | |
| TTGTTGGCATCATCATGTGG+AGG | + | chr8_3:57880008-57880027 | None:intergenic | 45.0% | |
| CACAGCAAAATACCATCCCT+AGG | + | chr8_3:57880786-57880805 | None:intergenic | 45.0% | |
| CATCAAGACATGGCAAGCTT+AGG | - | chr8_3:57881115-57881134 | Msa1297510:intron | 45.0% | |
| GAAGAAGGTAAGATGAAGGG+AGG | - | chr8_3:57881262-57881281 | Msa1297510:intron | 45.0% | |
| CACATTAGTTATCCGCTCTC+AGG | - | chr8_3:57881513-57881532 | Msa1297510:intron | 45.0% | |
| !! | GCTCTCAGGTTGAACAGTTA+AGG | - | chr8_3:57881527-57881546 | Msa1297510:intron | 45.0% |
| ! | CAGGTTGAACAGTTAAGGGT+CGG | - | chr8_3:57881532-57881551 | Msa1297510:intron | 45.0% |
| AAAGAGAAGCTCTTCGTTCC+CGG | - | chr8_3:57881624-57881643 | Msa1297510:intron | 45.0% | |
| TAGGATTCTAGTGGTTCCGT+AGG | + | chr8_3:57881667-57881686 | None:intergenic | 45.0% | |
| AAGTTGTAAGCTGTGCTCGA+AGG | - | chr8_3:57881763-57881782 | Msa1297510:intron | 45.0% | |
| AGTTGTAAGCTGTGCTCGAA+GGG | - | chr8_3:57881764-57881783 | Msa1297510:intron | 45.0% | |
| ! | TTGTCTATCGTTGGCCTCTA+TGG | - | chr8_3:57881790-57881809 | Msa1297510:intron | 45.0% |
| CCTCTATGGTAGAACCAGTT+GGG | - | chr8_3:57881804-57881823 | Msa1297510:intron | 45.0% | |
| CTCTATGGTAGAACCAGTTG+GGG | - | chr8_3:57881805-57881824 | Msa1297510:intron | 45.0% | |
| GAAAAGTTTGGGTAGAGCAC+GGG | + | chr8_3:57882116-57882135 | None:intergenic | 45.0% | |
| TCTACAAAACCAGCCCCATT+TGG | + | chr8_3:57882866-57882885 | None:intergenic | 45.0% | |
| GTAATGTTAACCAGTGCCCT+TGG | + | chr8_3:57883016-57883035 | None:intergenic | 45.0% | |
| ACCGACAAATGGCTTTCATC+AGG | - | chr8_3:57883808-57883827 | Msa1297510:intron | 45.0% | |
| AGTTGAGTCTGTGCTTGTGT+TGG | + | chr8_3:57883981-57884000 | None:intergenic | 45.0% | |
| ! | TTGAATTTTCCCCACTTCCC+AGG | + | chr8_3:57884302-57884321 | None:intergenic | 45.0% |
| TGAAACGCTCCTTGATCCAT+CGG | + | chr8_3:57884330-57884349 | None:intergenic | 45.0% | |
| ! | CGCTTTTGTGTGATTGGAGA+TGG | - | chr8_3:57884364-57884383 | Msa1297510:exon | 45.0% |
| ! | TATGAGATTTTCCTGGTCGC+GGG | + | chr8_3:57884444-57884463 | None:intergenic | 45.0% |
| ! | CTATGAGATTTTCCTGGTCG+CGG | + | chr8_3:57884445-57884464 | None:intergenic | 45.0% |
| ! | GGGAACCTATGAGATTTTCC+TGG | + | chr8_3:57884451-57884470 | None:intergenic | 45.0% |
| GGAAAATCTCATAGGTTCCC+TGG | - | chr8_3:57884451-57884470 | Msa1297510:intron | 45.0% | |
| ! | AGTTGGCCACTATTTCTCTG+TGG | - | chr8_3:57884489-57884508 | Msa1297510:intron | 45.0% |
| ACAGACAGGATCACGGAAAA+GGG | + | chr8_3:57884567-57884586 | None:intergenic | 45.0% | |
| AACAGACAGGATCACGGAAA+AGG | + | chr8_3:57884568-57884587 | None:intergenic | 45.0% | |
| TCCTGTCTGTTGCCCAAAAA+AGG | - | chr8_3:57884577-57884596 | Msa1297510:intron | 45.0% | |
| CCTGTCTGTTGCCCAAAAAA+GGG | - | chr8_3:57884578-57884597 | Msa1297510:intron | 45.0% | |
| TCTGTTGCCCAAAAAAGGGA+AGG | - | chr8_3:57884582-57884601 | Msa1297510:intron | 45.0% | |
| CTGTTGCCCAAAAAAGGGAA+GGG | - | chr8_3:57884583-57884602 | Msa1297510:intron | 45.0% | |
| ATGAGCTGGTGACCAAGATA+AGG | + | chr8_3:57884839-57884858 | None:intergenic | 45.0% | |
| !! | TGATAAAATAAATATTTAAA+TGG | - | chr8_3:57881203-57881222 | Msa1297510:intron | 5.0% |
| !!! | AATAAATATTTAAGTTTTAA+AGG | + | chr8_3:57881338-57881357 | None:intergenic | 5.0% |
| !! | GTTAAAAAAAAATAAAAAAT+TGG | + | chr8_3:57882414-57882433 | None:intergenic | 5.0% |
| TCTCTGCAACCACCTAAGCA+AGG | - | chr8_3:57878961-57878980 | Msa1297510:three_prime_UTR | 50.0% | |
| ! | GAGTCGTGGTGTTTTTCTGC+AGG | - | chr8_3:57879533-57879552 | Msa1297510:CDS | 50.0% |
| ! | TTTTTCTGCAGGGCACAGCT+AGG | - | chr8_3:57879544-57879563 | Msa1297510:CDS | 50.0% |
| GCACAGCTAGGTTAGTGGAA+TGG | - | chr8_3:57879556-57879575 | Msa1297510:CDS | 50.0% | |
| CAGCTAGGTTAGTGGAATGG+CGG | - | chr8_3:57879559-57879578 | Msa1297510:CDS | 50.0% | |
| !! | TGCAGAAAGGTGTCGAGCTT+GGG | - | chr8_3:57879741-57879760 | Msa1297510:intron | 50.0% |
| GTGGAGGGCCTAATTCATCT+TGG | + | chr8_3:57879992-57880011 | None:intergenic | 50.0% | |
| CTTAAGAGCAAAGAGTCGGG+CGG | - | chr8_3:57881594-57881613 | Msa1297510:intron | 50.0% | |
| TCTCCTGTAGCTGGATCCTA+CGG | - | chr8_3:57881648-57881667 | Msa1297510:intron | 50.0% | |
| GCCTCTATGGTAGAACCAGT+TGG | - | chr8_3:57881803-57881822 | Msa1297510:intron | 50.0% | |
| !! | CCCAACTGGTTCTACCATAG+AGG | + | chr8_3:57881807-57881826 | None:intergenic | 50.0% |
| AACTCCTGCCACTGCCAAAT+GGG | - | chr8_3:57882849-57882868 | Msa1297510:intron | 50.0% | |
| ACCAGAACACTCCGTCAAAC+AGG | + | chr8_3:57883924-57883943 | None:intergenic | 50.0% | |
| AGTGTATAGCTCCTGGGAAG+TGG | - | chr8_3:57884288-57884307 | Msa1297510:CDS | 50.0% | |
| GTGTATAGCTCCTGGGAAGT+GGG | - | chr8_3:57884289-57884308 | Msa1297510:CDS | 50.0% | |
| TGTATAGCTCCTGGGAAGTG+GGG | - | chr8_3:57884290-57884309 | Msa1297510:CDS | 50.0% | |
| CACAAAAGCGAACGTTGGGA+TGG | + | chr8_3:57884354-57884373 | None:intergenic | 50.0% | |
| GTTAAAATTGACCCGCGACC+AGG | - | chr8_3:57884430-57884449 | Msa1297510:intron | 50.0% | |
| CGCGACCAGGAAAATCTCAT+AGG | - | chr8_3:57884443-57884462 | Msa1297510:intron | 50.0% | |
| !! | CTGTTTTGGATGTGAGGCCA+GGG | + | chr8_3:57884471-57884490 | None:intergenic | 50.0% |
| !! | ACTGTTTTGGATGTGAGGCC+AGG | + | chr8_3:57884472-57884491 | None:intergenic | 50.0% |
| GGCCTCACATCCAAAACAGT+TGG | - | chr8_3:57884472-57884491 | Msa1297510:intron | 50.0% | |
| !! | GGCCAACTGTTTTGGATGTG+AGG | + | chr8_3:57884477-57884496 | None:intergenic | 50.0% |
| TTGGGCAACAGACAGGATCA+CGG | + | chr8_3:57884574-57884593 | None:intergenic | 50.0% | |
| !!! | CCCTTTTTTGGGCAACAGAC+AGG | + | chr8_3:57884581-57884600 | None:intergenic | 50.0% |
| AAGTTGTGGCAGCCATCACA+TGG | + | chr8_3:57884660-57884679 | None:intergenic | 50.0% | |
| AGTGGAATGGCGGTTGCATC+TGG | - | chr8_3:57879569-57879588 | Msa1297510:CDS | 55.0% | |
| GTGGAATGGCGGTTGCATCT+GGG | - | chr8_3:57879570-57879589 | Msa1297510:CDS | 55.0% | |
| GGATGAGGGCGGATGAAACA+CGG | - | chr8_3:57879591-57879610 | Msa1297510:CDS | 55.0% | |
| GATGAGGGCGGATGAAACAC+GGG | - | chr8_3:57879592-57879611 | Msa1297510:CDS | 55.0% | |
| CCTGGGATGGATGTTGTCAC+TGG | + | chr8_3:57879624-57879643 | None:intergenic | 55.0% | |
| CCAGTGACAACATCCATCCC+AGG | - | chr8_3:57879621-57879640 | Msa1297510:CDS | 55.0% | |
| TGACAACATCCATCCCAGGC+TGG | - | chr8_3:57879625-57879644 | Msa1297510:CDS | 55.0% | |
| !! | GTGCAGAAAGGTGTCGAGCT+TGG | - | chr8_3:57879740-57879759 | Msa1297510:intron | 55.0% |
| TGTCGAGCTTGGGAAGACGT+GGG | - | chr8_3:57879751-57879770 | Msa1297510:intron | 55.0% | |
| GATAGCTGCGAACCTAGGGA+TGG | - | chr8_3:57880771-57880790 | Msa1297510:intron | 55.0% | |
| GATCCAGCTACAGGAGAACC+GGG | + | chr8_3:57881645-57881664 | None:intergenic | 55.0% | |
| GGATCCAGCTACAGGAGAAC+CGG | + | chr8_3:57881646-57881665 | None:intergenic | 55.0% | |
| GTTCCGTAGGATCCAGCTAC+AGG | + | chr8_3:57881654-57881673 | None:intergenic | 55.0% | |
| TATGAGTCTCAGGCCCCAAC+TGG | + | chr8_3:57881821-57881840 | None:intergenic | 55.0% | |
| AATATGACCCGTGCGACGCA+CGG | + | chr8_3:57881865-57881884 | None:intergenic | 55.0% | |
| GAACTCCTGCCACTGCCAAA+TGG | - | chr8_3:57882848-57882867 | Msa1297510:intron | 55.0% | |
| ACTCCTGCCACTGCCAAATG+GGG | - | chr8_3:57882850-57882869 | Msa1297510:intron | 55.0% | |
| AAACCAGCCCCATTTGGCAG+TGG | + | chr8_3:57882860-57882879 | None:intergenic | 55.0% | |
| ! | GACACTGGTTAAGGGGACAC+CGG | + | chr8_3:57882993-57883012 | None:intergenic | 55.0% |
| TCCCCTTAACCAGTGTCCCA+AGG | - | chr8_3:57882996-57883015 | Msa1297510:intron | 55.0% | |
| ! | CCCTTGGGACACTGGTTAAG+GGG | + | chr8_3:57883000-57883019 | None:intergenic | 55.0% |
| CCCCTTAACCAGTGTCCCAA+GGG | - | chr8_3:57882997-57883016 | Msa1297510:intron | 55.0% | |
| ! | GCCCTTGGGACACTGGTTAA+GGG | + | chr8_3:57883001-57883020 | None:intergenic | 55.0% |
| ! | TGCCCTTGGGACACTGGTTA+AGG | + | chr8_3:57883002-57883021 | None:intergenic | 55.0% |
| TTCAGCACGGGCCTGTTTGA+CGG | - | chr8_3:57883910-57883929 | Msa1297510:CDS | 55.0% | |
| ! | GCCTGTTTGACGGAGTGTTC+TGG | - | chr8_3:57883920-57883939 | Msa1297510:CDS | 55.0% |
| GCAGGGCACAGCTAGGTTAG+TGG | - | chr8_3:57879551-57879570 | Msa1297510:CDS | 60.0% | |
| ! | TGGCGGTTGCATCTGGGATG+AGG | - | chr8_3:57879576-57879595 | Msa1297510:CDS | 60.0% |
| ! | GGCGGTTGCATCTGGGATGA+GGG | - | chr8_3:57879577-57879596 | Msa1297510:CDS | 60.0% |
| ! | GGTTGCATCTGGGATGAGGG+CGG | - | chr8_3:57879580-57879599 | Msa1297510:CDS | 60.0% |
| GTGTCGAGCTTGGGAAGACG+TGG | - | chr8_3:57879750-57879769 | Msa1297510:intron | 60.0% | |
| GTTCCCGGTTCTCCTGTAGC+TGG | - | chr8_3:57881639-57881658 | Msa1297510:intron | 60.0% | |
| ATATGACCCGTGCGACGCAC+GGG | + | chr8_3:57881864-57881883 | None:intergenic | 60.0% | |
| ! | AACCAGTGTCCCAAGGGCAC+TGG | - | chr8_3:57883003-57883022 | Msa1297510:intron | 60.0% |
| AACCAGTGCCCTTGGGACAC+TGG | + | chr8_3:57883008-57883027 | None:intergenic | 60.0% | |
| CCATTGACCCGTGCGTCGCA+CGG | - | chr8_3:57881854-57881873 | Msa1297510:intron | 65.0% | |
| CATTGACCCGTGCGTCGCAC+GGG | - | chr8_3:57881855-57881874 | Msa1297510:intron | 65.0% | |
| CAGCCCCATTTGGCAGTGGC+AGG | + | chr8_3:57882856-57882875 | None:intergenic | 65.0% | |
| CTGCCACTGCCAAATGGGGC+TGG | - | chr8_3:57882854-57882873 | Msa1297510:intron | 65.0% | |
| CCGTGCGACGCACGGGTCAA+TGG | + | chr8_3:57881857-57881876 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 57878910 | 57885034 | 57878910 | ID=Msa1297510;Name=Msa1297510 |
| chr8_3 | mRNA | 57878910 | 57885034 | 57878910 | ID=Msa1297510-mRNA-1;Parent=Msa1297510;Name=Msa1297510-mRNA-1;_AED=0.04;_eAED=0.04;_QI=93|1|1|1|0.5|0.42|7|435|318 |
| chr8_3 | exon | 57878910 | 57878996 | 57878910 | ID=Msa1297510-mRNA-1:exon:16564;Parent=Msa1297510-mRNA-1 |
| chr8_3 | exon | 57879053 | 57879654 | 57879053 | ID=Msa1297510-mRNA-1:exon:16563;Parent=Msa1297510-mRNA-1 |
| chr8_3 | exon | 57879835 | 57880029 | 57879835 | ID=Msa1297510-mRNA-1:exon:16562;Parent=Msa1297510-mRNA-1 |
| chr8_3 | exon | 57880115 | 57880208 | 57880115 | ID=Msa1297510-mRNA-1:exon:16561;Parent=Msa1297510-mRNA-1 |
| chr8_3 | exon | 57883868 | 57884035 | 57883868 | ID=Msa1297510-mRNA-1:exon:16560;Parent=Msa1297510-mRNA-1 |
| chr8_3 | exon | 57884124 | 57884389 | 57884124 | ID=Msa1297510-mRNA-1:exon:16559;Parent=Msa1297510-mRNA-1 |
| chr8_3 | exon | 57884962 | 57885034 | 57884962 | ID=Msa1297510-mRNA-1:exon:16558;Parent=Msa1297510-mRNA-1 |
| chr8_3 | five_prime_UTR | 57884962 | 57885034 | 57884962 | ID=Msa1297510-mRNA-1:five_prime_utr;Parent=Msa1297510-mRNA-1 |
| chr8_3 | five_prime_UTR | 57884370 | 57884389 | 57884370 | ID=Msa1297510-mRNA-1:five_prime_utr;Parent=Msa1297510-mRNA-1 |
| chr8_3 | CDS | 57884124 | 57884369 | 57884124 | ID=Msa1297510-mRNA-1:cds;Parent=Msa1297510-mRNA-1 |
| chr8_3 | CDS | 57883868 | 57884035 | 57883868 | ID=Msa1297510-mRNA-1:cds;Parent=Msa1297510-mRNA-1 |
| chr8_3 | CDS | 57880115 | 57880208 | 57880115 | ID=Msa1297510-mRNA-1:cds;Parent=Msa1297510-mRNA-1 |
| chr8_3 | CDS | 57879835 | 57880029 | 57879835 | ID=Msa1297510-mRNA-1:cds;Parent=Msa1297510-mRNA-1 |
| chr8_3 | CDS | 57879401 | 57879654 | 57879401 | ID=Msa1297510-mRNA-1:cds;Parent=Msa1297510-mRNA-1 |
| chr8_3 | three_prime_UTR | 57879053 | 57879400 | 57879053 | ID=Msa1297510-mRNA-1:three_prime_utr;Parent=Msa1297510-mRNA-1 |
| chr8_3 | three_prime_UTR | 57878910 | 57878996 | 57878910 | ID=Msa1297510-mRNA-1:three_prime_utr;Parent=Msa1297510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
