Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250510 | XP_003608623.4 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250510 | sp|O82162|EYA_ARATH | 59.727 | 293 | 110 | 1 | 24 | 316 | 19 | 303 | 8.78e-133 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0194950 | Msa1250510 | -0.808686 | 2.741605e-50 | -8.615850e-47 |
| Msa0236960 | Msa1250510 | -0.821778 | 3.369255e-53 | -8.615850e-47 |
| Msa1250510 | Msa1297510 | 0.983806 | 9.272743e-159 | -8.615850e-47 |
| Msa1250510 | Msa1297570 | 0.953483 | 2.482151e-111 | -8.615850e-47 |
| Msa1250510 | Msa1385770 | 0.805508 | 1.290291e-49 | -8.615850e-47 |
| Msa1250510 | Msa1409240 | 0.806809 | 6.867203e-50 | -8.615850e-47 |
| Msa1250510 | Msa1426890 | 0.994300 | 3.890845e-206 | -8.615850e-47 |
| Msa1250510 | Msa1434140 | 0.811886 | 5.593317e-51 | -8.615850e-47 |
| Msa1250510 | Msa1435240 | 0.992888 | 4.458625e-196 | -8.615850e-47 |
| Msa1250510 | Msa1440200 | 0.833203 | 6.104470e-56 | -8.615850e-47 |
| Msa0398670 | Msa1250510 | 0.809138 | 2.194141e-50 | -8.615850e-47 |
| Msa0295710 | Msa1250510 | 0.802123 | 6.513733e-49 | -8.615850e-47 |
| Msa0315440 | Msa1250510 | -0.809594 | 1.751677e-50 | -8.615850e-47 |
| Msa0934850 | Msa1250510 | 0.844964 | 5.456375e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250510 | MtrunA17_Chr4g0054711 | 95.283 | 318 | 15 | 0 | 1 | 318 | 1 | 318 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250510 | AT2G35320.1 | 59.727 | 293 | 110 | 1 | 24 | 316 | 19 | 303 | 8.93e-134 | 382 |
Find 99 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGGCTGGATGTTTATATT+TGG | 0.134573 | 8_2:-46248245 | Msa1250510:CDS |
| GTCCTTCCCATCATCATATT+TGG | 0.167846 | 8_2:+46247938 | None:intergenic |
| GAAATAGTGGCCAACTGTTT+TGG | 0.272876 | 8_2:+46243434 | None:intergenic |
| AGTGGAATGGCGGTTGCATC+TGG | 0.283682 | 8_2:-46248315 | Msa1250510:exon |
| GTTATAAGCAAGTTTGCTTT+TGG | 0.309186 | 8_2:-46242905 | Msa1250510:three_prime_UTR |
| GTAAGGAGTTGAGCAGTATA+AGG | 0.313569 | 8_2:+46248208 | None:intergenic |
| CAGGCTGGATGTTTATATTT+GGG | 0.326293 | 8_2:-46248244 | Msa1250510:CDS |
| TCTTCGTCATTGTCATTGTT+TGG | 0.328913 | 8_2:+46243399 | None:intergenic |
| TACTGCTAAATGAACGATAA+AGG | 0.355011 | 8_2:+46243048 | None:intergenic |
| GACTTCAACCAAGATGAATT+AGG | 0.355911 | 8_2:-46247903 | Msa1250510:CDS |
| ATCAGGAGACAATAAAAGTA+TGG | 0.360230 | 8_2:-46244161 | Msa1250510:CDS |
| AAAATGCTTGCTCTTTCATC+TGG | 0.365350 | 8_2:-46243853 | Msa1250510:CDS |
| GCCTGTTTGACGGAGTGTTC+TGG | 0.403472 | 8_2:-46243996 | Msa1250510:CDS |
| TGGCGGTTGCATCTGGGATG+AGG | 0.421814 | 8_2:-46248308 | Msa1250510:CDS |
| GTTAGTTAGTTACCTTGCTT+AGG | 0.429764 | 8_2:+46248854 | None:intergenic |
| TATACACATGGCAACACAAT+TGG | 0.430793 | 8_2:+46243290 | None:intergenic |
| ACAAAAGAAAACTTGCATAT+AGG | 0.431167 | 8_2:-46247860 | Msa1250510:CDS |
| TGCAGAAAGGTGTCGAGCTT+GGG | 0.436778 | 8_2:-46248143 | Msa1250510:CDS |
| GTTAAAATTGACCCGCGACC+AGG | 0.438397 | 8_2:-46243486 | Msa1250510:CDS |
| TTGGACAGAACATCAAGAAA+TGG | 0.442699 | 8_2:+46247957 | None:intergenic |
| ACCAGAACACTCCGTCAAAC+AGG | 0.443403 | 8_2:+46243995 | None:intergenic |
| TATATATATGAACCTTATCT+TGG | 0.449587 | 8_2:-46243092 | Msa1250510:three_prime_UTR |
| TCATTTCAGTGTATAGCTCC+TGG | 0.451230 | 8_2:-46243635 | Msa1250510:intron |
| TTCAGCACGGGCCTGTTTGA+CGG | 0.451891 | 8_2:-46244006 | Msa1250510:intron |
| CTGATGAATATACCGACAAA+TGG | 0.459678 | 8_2:-46244119 | Msa1250510:CDS |
| GCCACAACTTAGATGTTAAC+GGG | 0.461271 | 8_2:-46243246 | Msa1250510:three_prime_UTR |
| AACAGACAGGATCACGGAAA+AGG | 0.467858 | 8_2:+46243351 | None:intergenic |
| TGCCACAACTTAGATGTTAA+CGG | 0.467936 | 8_2:-46243247 | Msa1250510:three_prime_UTR |
| TCAATGTTTCCGATGGATCA+AGG | 0.468622 | 8_2:-46243598 | Msa1250510:CDS |
| ATCACACAAAAGCGAACGTT+GGG | 0.471747 | 8_2:+46243561 | None:intergenic |
| GTGCAGAAAGGTGTCGAGCT+TGG | 0.477963 | 8_2:-46248144 | Msa1250510:CDS |
| TAAGGAGTTGAGCAGTATAA+GGG | 0.478805 | 8_2:+46248209 | None:intergenic |
| GATATACCACAGAGAAATAG+TGG | 0.480780 | 8_2:+46243421 | None:intergenic |
| ACCTGATGAAAGCCATTTGT+CGG | 0.482110 | 8_2:+46244107 | None:intergenic |
| AGTGTATAGCTCCTGGGAAG+TGG | 0.483068 | 8_2:-46243628 | Msa1250510:CDS |
| GCAGGGCACAGCTAGGTTAG+TGG | 0.485399 | 8_2:-46248333 | Msa1250510:intron |
| ACCGACAAATGGCTTTCATC+AGG | 0.486588 | 8_2:-46244108 | Msa1250510:intron |
| GTGGAGGGCCTAATTCATCT+TGG | 0.487188 | 8_2:+46247895 | None:intergenic |
| AGTTAGTTACCTTGCTTAGG+TGG | 0.492131 | 8_2:+46248857 | None:intergenic |
| AGCTTAATAACACATGGAAA+TGG | 0.499983 | 8_2:-46243828 | Msa1250510:intron |
| CCAAATATAAACATCCAGCC+TGG | 0.501450 | 8_2:+46248245 | None:intergenic |
| ACAGACAGGATCACGGAAAA+GGG | 0.508964 | 8_2:+46243352 | None:intergenic |
| GGCGGTTGCATCTGGGATGA+GGG | 0.510055 | 8_2:-46248307 | Msa1250510:CDS |
| TTTATCGTTCATTTAGCAGT+AGG | 0.512601 | 8_2:-46243046 | Msa1250510:intron |
| GTGTATAGCTCCTGGGAAGT+GGG | 0.525965 | 8_2:-46243627 | Msa1250510:CDS |
| TGTTGGCATCATCATGTGGA+GGG | 0.526573 | 8_2:+46247880 | None:intergenic |
| GGAAAATTCAATGTTTCCGA+TGG | 0.526933 | 8_2:-46243605 | Msa1250510:CDS |
| GTTCTGTCCAAATATGATGA+TGG | 0.527183 | 8_2:-46247945 | Msa1250510:CDS |
| CGCGACCAGGAAAATCTCAT+AGG | 0.528352 | 8_2:-46243473 | Msa1250510:CDS |
| TTGTGTGATTGGAGATGGAT+GGG | 0.529397 | 8_2:-46243547 | Msa1250510:CDS |
| GGATGAGGGCGGATGAAACA+CGG | 0.531138 | 8_2:-46248293 | Msa1250510:CDS |
| GGTTGAAGTCATAATCAGAT+AGG | 0.531324 | 8_2:+46247916 | None:intergenic |
| CCTGGGATGGATGTTGTCAC+TGG | 0.532753 | 8_2:+46248263 | None:intergenic |
| GGAAAATCTCATAGGTTCCC+TGG | 0.533790 | 8_2:-46243465 | Msa1250510:CDS |
| TTGTTGGCATCATCATGTGG+AGG | 0.540277 | 8_2:+46247879 | None:intergenic |
| AAGCTGCAGAAATCATGAAA+TGG | 0.540685 | 8_2:-46243515 | Msa1250510:CDS |
| GTGGAATGGCGGTTGCATCT+GGG | 0.541648 | 8_2:-46248314 | Msa1250510:exon |
| TGAAACGCTCCTTGATCCAT+CGG | 0.542051 | 8_2:+46243589 | None:intergenic |
| AGTTGAGTCTGTGCTTGTGT+TGG | 0.545298 | 8_2:+46243938 | None:intergenic |
| GTGTCGAGCTTGGGAAGACG+TGG | 0.551286 | 8_2:-46248134 | Msa1250510:CDS |
| TTTCAGACCGTTGAAAGCCT+CGG | 0.551738 | 8_2:+46248170 | None:intergenic |
| CATTTCAGTGTATAGCTCCT+GGG | 0.553970 | 8_2:-46243634 | Msa1250510:intron |
| TGACAACATCCATCCCAGGC+TGG | 0.557450 | 8_2:-46248259 | Msa1250510:CDS |
| CTGGACAGCTTAATAACACA+TGG | 0.559956 | 8_2:-46243834 | Msa1250510:CDS |
| GGATGTTTATATTTGGGACA+TGG | 0.560493 | 8_2:-46248238 | Msa1250510:CDS |
| ATTTAGAAGTAGATGTGGAC+GGG | 0.563466 | 8_2:-46243169 | Msa1250510:three_prime_UTR |
| TATAAACATCCAGCCTGGGA+TGG | 0.563931 | 8_2:+46248250 | None:intergenic |
| GGCATATGATGATTTCAGTA+AGG | 0.564789 | 8_2:+46248191 | None:intergenic |
| TTTGTGTGATTGGAGATGGA+TGG | 0.565338 | 8_2:-46243548 | Msa1250510:CDS |
| ATGAGCTGGTGACCAAGATA+AGG | 0.570199 | 8_2:+46243080 | None:intergenic |
| CACAAATTTAGAAGTAGATG+TGG | 0.570200 | 8_2:-46243174 | Msa1250510:three_prime_UTR |
| GGCCTCACATCCAAAACAGT+TGG | 0.572986 | 8_2:-46243444 | Msa1250510:CDS |
| TTCTGTCCAAATATGATGAT+GGG | 0.586519 | 8_2:-46247944 | Msa1250510:CDS |
| CAAATATAAACATCCAGCCT+GGG | 0.588832 | 8_2:+46248246 | None:intergenic |
| ACCCGTTAACATCTAAGTTG+TGG | 0.593787 | 8_2:+46243245 | None:intergenic |
| CACAAAAGCGAACGTTGGGA+TGG | 0.594094 | 8_2:+46243565 | None:intergenic |
| GGTTGCATCTGGGATGAGGG+CGG | 0.595621 | 8_2:-46248304 | Msa1250510:CDS |
| GATGAGGGCGGATGAAACAC+GGG | 0.597702 | 8_2:-46248292 | Msa1250510:CDS |
| GTCCAAATATGATGATGGGA+AGG | 0.598075 | 8_2:-46247940 | Msa1250510:CDS |
| CCAGTGACAACATCCATCCC+AGG | 0.601396 | 8_2:-46248263 | Msa1250510:CDS |
| TGTATAGCTCCTGGGAAGTG+GGG | 0.615041 | 8_2:-46243626 | Msa1250510:CDS |
| AAAGGTGAGATATGATGAGC+TGG | 0.618326 | 8_2:+46243066 | None:intergenic |
| TATATATTGATGCCATGTGA+TGG | 0.618870 | 8_2:-46243271 | Msa1250510:three_prime_UTR |
| GCACAGCTAGGTTAGTGGAA+TGG | 0.619207 | 8_2:-46248328 | Msa1250510:exon |
| AATCACACAAAAGCGAACGT+TGG | 0.620019 | 8_2:+46243560 | None:intergenic |
| TTGGGCAACAGACAGGATCA+CGG | 0.620213 | 8_2:+46243345 | None:intergenic |
| AATTTAGAAGTAGATGTGGA+CGG | 0.624181 | 8_2:-46243170 | Msa1250510:three_prime_UTR |
| AAGTTGTGGCAGCCATCACA+TGG | 0.624650 | 8_2:+46243259 | None:intergenic |
| GGTCTGAAAGATGTGCAGAA+AGG | 0.625906 | 8_2:-46248156 | Msa1250510:CDS |
| TCATATGCCGAGGCTTTCAA+CGG | 0.629640 | 8_2:-46248177 | Msa1250510:CDS |
| TTCTGGTGAAAATAAAGACG+TGG | 0.641960 | 8_2:-46243979 | Msa1250510:CDS |
| CAGCTAGGTTAGTGGAATGG+CGG | 0.653323 | 8_2:-46248325 | Msa1250510:exon |
| TCTCTGCAACCACCTAAGCA+AGG | 0.661296 | 8_2:-46248866 | Msa1250510:intron |
| ACTGAAATCATCATATGCCG+AGG | 0.664008 | 8_2:-46248187 | Msa1250510:CDS |
| CATCTTATATACATGAGCAG+AGG | 0.677676 | 8_2:+46243126 | None:intergenic |
| AGTTGGCCACTATTTCTCTG+TGG | 0.681956 | 8_2:-46243427 | Msa1250510:CDS |
| CTTGTGATAATAACTGTACG+AGG | 0.682279 | 8_2:+46242949 | None:intergenic |
| TGTCGAGCTTGGGAAGACGT+GGG | 0.694651 | 8_2:-46248133 | Msa1250510:CDS |
| ATGGCATCAATATATACACA+TGG | 0.727755 | 8_2:+46243278 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAATAAAAAATT+GGG | + | chr8_2:46246320-46246339 | None:intergenic | 0.0% |
| !!! | AAACTTATATTTTTAAACAA+GGG | + | chr8_2:46244436-46244455 | None:intergenic | 10.0% |
| !!! | AAATTTTGTATTTATTTCTA+TGG | - | chr8_2:46244879-46244898 | Msa1250510:intron | 10.0% |
| !!! | TCTTTATTTTCTAATATAAT+TGG | + | chr8_2:46246415-46246434 | None:intergenic | 10.0% |
| !! | ATTATATTAGAAAATAAAGA+AGG | - | chr8_2:46246415-46246434 | Msa1250510:intron | 10.0% |
| !!! | ATTATGATTATTGATTCAAA+TGG | + | chr8_2:46244329-46244348 | None:intergenic | 15.0% |
| !!! | GAAACTTATATTTTTAAACA+AGG | + | chr8_2:46244437-46244456 | None:intergenic | 15.0% |
| !!! | TTTCTAAAACATGATATTTT+TGG | - | chr8_2:46244453-46244472 | Msa1250510:intron | 15.0% |
| !!! | TTTTTACTTATCTATTATAC+TGG | - | chr8_2:46244514-46244533 | Msa1250510:intron | 15.0% |
| !!! | TATTTTCTAATATAATTGGA+AGG | + | chr8_2:46246411-46246430 | None:intergenic | 15.0% |
| !!! | ATTTGAAACAATTATGATAT+TGG | - | chr8_2:46247169-46247188 | Msa1250510:intron | 15.0% |
| !!! | TTTACATAATATTTTAGATC+AGG | - | chr8_2:46247643-46247662 | Msa1250510:intron | 15.0% |
| !! | TAAATATAACTAATACATAC+AGG | + | chr8_2:46247780-46247799 | None:intergenic | 15.0% |
| !! | AACTAGTAATCATATTATAT+TGG | - | chr8_2:46248101-46248120 | Msa1250510:CDS | 15.0% |
| !! | ACTAGTAATCATATTATATT+GGG | - | chr8_2:46248102-46248121 | Msa1250510:CDS | 15.0% |
| !! | ATAATGATGTCAATATTGAA+TGG | - | chr8_2:46243415-46243434 | Msa1250510:CDS | 20.0% |
| !! | CATAAAAGGAAACAATTATA+TGG | + | chr8_2:46244412-46244431 | None:intergenic | 20.0% |
| !!! | ATGATATTTTTGGTTTTACA+AGG | - | chr8_2:46244463-46244482 | Msa1250510:intron | 20.0% |
| !! | ACCATAATGTAATGTATATA+TGG | - | chr8_2:46244553-46244572 | Msa1250510:intron | 20.0% |
| !! | AATATACTAAGACAACATAT+AGG | + | chr8_2:46244919-46244938 | None:intergenic | 20.0% |
| !!! | ATTTTTTTAACAGGATTCTA+TGG | + | chr8_2:46245423-46245442 | None:intergenic | 20.0% |
| !! | GAATCCTGTTAAAAAAATAA+CGG | - | chr8_2:46245425-46245444 | Msa1250510:intron | 20.0% |
| !! | AACATTACCTTAAAAAGTAA+AGG | - | chr8_2:46245988-46246007 | Msa1250510:intron | 20.0% |
| !! | ACATTACCTTAAAAAGTAAA+GGG | - | chr8_2:46245989-46246008 | Msa1250510:intron | 20.0% |
| !!! | AAAAGATTTTTTTTAACCTC+CGG | + | chr8_2:46246274-46246293 | None:intergenic | 20.0% |
| !!! | ATGATTATTGACTTCATAAA+AGG | + | chr8_2:46246356-46246375 | None:intergenic | 20.0% |
| !! | TAATGAAGATAAACAGATAT+TGG | + | chr8_2:46246461-46246480 | None:intergenic | 20.0% |
| !! | GTATCAGTATGAATAAAAAA+AGG | - | chr8_2:46246510-46246529 | Msa1250510:intron | 20.0% |
| !! | GGAATAATTATTGTTCAAAT+TGG | - | chr8_2:46246531-46246550 | Msa1250510:intron | 20.0% |
| !!! | AAGCACACTTTTTATTTTAA+GGG | + | chr8_2:46246943-46246962 | None:intergenic | 20.0% |
| !!! | TAAGCACACTTTTTATTTTA+AGG | + | chr8_2:46246944-46246963 | None:intergenic | 20.0% |
| !!! | GAATAAAAAGCACTAATTAA+TGG | - | chr8_2:46247144-46247163 | Msa1250510:intron | 20.0% |
| !! | ACTTACTATAAAAGCTTATT+AGG | + | chr8_2:46247440-46247459 | None:intergenic | 20.0% |
| !! | TTAAATGAAGTAAACTTGTA+TGG | + | chr8_2:46247588-46247607 | None:intergenic | 20.0% |
| !! | ATACAAGTTTACTTCATTTA+AGG | - | chr8_2:46247587-46247606 | Msa1250510:intron | 20.0% |
| !!! | TTGTTTTATATATTTCAGCA+CGG | - | chr8_2:46247802-46247821 | Msa1250510:intron | 20.0% |
| !!! | ATATGATTACTAGTTTTGAA+TGG | + | chr8_2:46248096-46248115 | None:intergenic | 20.0% |
| !! | CTAGTAATCATATTATATTG+GGG | - | chr8_2:46248103-46248122 | Msa1250510:CDS | 20.0% |
| !!! | TGAACTATTTTTATATGACA+TGG | - | chr8_2:46248615-46248634 | Msa1250510:intron | 20.0% |
| !! | TATATATATGAACCTTATCT+TGG | - | chr8_2:46248729-46248748 | Msa1250510:intron | 20.0% |
| ! | AAAAGTTGAAAATCACGATA+TGG | + | chr8_2:46243030-46243049 | None:intergenic | 25.0% |
| ! | CAGTTGAAAGAATAATTCAA+CGG | + | chr8_2:46243167-46243186 | None:intergenic | 25.0% |
| ! | TTGAATTATTCTTTCAACTG+AGG | - | chr8_2:46243167-46243186 | Msa1250510:three_prime_UTR | 25.0% |
| !!! | ATTATAGTTTTTTAGCTCAG+CGG | - | chr8_2:46243346-46243365 | Msa1250510:three_prime_UTR | 25.0% |
| ! | TCAATATTGACATCATTATC+CGG | + | chr8_2:46243414-46243433 | None:intergenic | 25.0% |
| !! | TCTTGTTCAAATATTTTCCA+TGG | - | chr8_2:46243772-46243791 | Msa1250510:intron | 25.0% |
| !! | ATATGCAAGTTTTCTTTTGT+TGG | + | chr8_2:46243961-46243980 | None:intergenic | 25.0% |
| ! | ACAAAAGAAAACTTGCATAT+AGG | - | chr8_2:46243961-46243980 | Msa1250510:CDS | 25.0% |
| ! | ATAAATGAATCAATTTCAGG+AGG | + | chr8_2:46244125-46244144 | None:intergenic | 25.0% |
| ! | CAGATAAATGAATCAATTTC+AGG | + | chr8_2:46244128-46244147 | None:intergenic | 25.0% |
| ! | AATGAACGAAATGTATAAAG+GGG | + | chr8_2:46244306-46244325 | None:intergenic | 25.0% |
| ! | GAATGAACGAAATGTATAAA+GGG | + | chr8_2:46244307-46244326 | None:intergenic | 25.0% |
| !! | TTTTAAACAAGGGTCATAAA+AGG | + | chr8_2:46244426-46244445 | None:intergenic | 25.0% |
| !! | ATTATGGTTTTCTAGATAGT+AGG | + | chr8_2:46244541-46244560 | None:intergenic | 25.0% |
| ! | GCCATATATACATTACATTA+TGG | + | chr8_2:46244557-46244576 | None:intergenic | 25.0% |
| ! | TAATGTATATATGGCTGAAA+TGG | - | chr8_2:46244562-46244581 | Msa1250510:intron | 25.0% |
| ! | CAGCTATCTAAATTAAGATT+AGG | + | chr8_2:46244696-46244715 | None:intergenic | 25.0% |
| ! | AGAAATAAACAAGTTATGAC+AGG | + | chr8_2:46244797-46244816 | None:intergenic | 25.0% |
| !!! | TATTTCTAGTATGTGATGAA+TGG | - | chr8_2:46244810-46244829 | Msa1250510:intron | 25.0% |
| !!! | CATGTTTTAGGTAAAATGAA+GGG | + | chr8_2:46245001-46245020 | None:intergenic | 25.0% |
| !!! | TCATGTTTTAGGTAAAATGA+AGG | + | chr8_2:46245002-46245021 | None:intergenic | 25.0% |
| !! | TGTCAACATTTTCATGTTTT+AGG | + | chr8_2:46245013-46245032 | None:intergenic | 25.0% |
| ! | CCTTTACTATATCTTCAATA+TGG | + | chr8_2:46245116-46245135 | None:intergenic | 25.0% |
| ! | CCATATTGAAGATATAGTAA+AGG | - | chr8_2:46245113-46245132 | Msa1250510:intron | 25.0% |
| !!! | TGTTCCGTTATTTTTTTAAC+AGG | + | chr8_2:46245432-46245451 | None:intergenic | 25.0% |
| ! | ACTCTTCTCAAAATATCAAA+AGG | + | chr8_2:46245653-46245672 | None:intergenic | 25.0% |
| !!! | TATGTACCCTTTACTTTTTA+AGG | + | chr8_2:46245998-46246017 | None:intergenic | 25.0% |
| !!! | CTATTTTTCTTACGTGATTT+AGG | + | chr8_2:46246191-46246210 | None:intergenic | 25.0% |
| !! | TCTTCGTTTTGTATAAATAC+CGG | - | chr8_2:46246252-46246271 | Msa1250510:intron | 25.0% |
| ! | TGCTTATTATGGAAATATGT+AGG | + | chr8_2:46246561-46246580 | None:intergenic | 25.0% |
| ! | ATATTTCCATAATAAGCATC+AGG | - | chr8_2:46246563-46246582 | Msa1250510:intron | 25.0% |
| ! | TCTTAAAAACGTTAGTTGTT+GGG | + | chr8_2:46246678-46246697 | None:intergenic | 25.0% |
| ! | ATCTTAAAAACGTTAGTTGT+TGG | + | chr8_2:46246679-46246698 | None:intergenic | 25.0% |
| ! | ACCCAACAACTATAAAAATA+GGG | - | chr8_2:46246707-46246726 | Msa1250510:intron | 25.0% |
| ! | ACATAGGGCTATTAAAATAA+AGG | - | chr8_2:46246863-46246882 | Msa1250510:intron | 25.0% |
| ! | TATGAAAGGACATTTACATT+TGG | - | chr8_2:46247299-46247318 | Msa1250510:intron | 25.0% |
| ! | ATGAAAGGACATTTACATTT+GGG | - | chr8_2:46247300-46247319 | Msa1250510:intron | 25.0% |
| ! | TATTGAGACTTAAAGAGTTA+TGG | - | chr8_2:46247557-46247576 | Msa1250510:intron | 25.0% |
| !! | TGTTTTATATATTTCAGCAC+GGG | - | chr8_2:46247803-46247822 | Msa1250510:intron | 25.0% |
| !!! | TATTTTTATATGACATGGCT+GGG | - | chr8_2:46248620-46248639 | Msa1250510:intron | 25.0% |
| TATAGTTACAGTTGAAGAGA+TGG | + | chr8_2:46243004-46243023 | None:intergenic | 30.0% | |
| GTAACTATCAACAATACACA+AGG | + | chr8_2:46243298-46243317 | None:intergenic | 30.0% | |
| !! | TGTATTGTTGATAGTTACAG+TGG | - | chr8_2:46243300-46243319 | Msa1250510:three_prime_UTR | 30.0% |
| TCAATCTGCAAAACAAAAAC+CGG | + | chr8_2:46243831-46243850 | None:intergenic | 30.0% | |
| TTCTGTCCAAATATGATGAT+GGG | - | chr8_2:46243877-46243896 | Msa1250510:CDS | 30.0% | |
| ! | TGTTACCTGCAAGTATTTTT+GGG | + | chr8_2:46244000-46244019 | None:intergenic | 30.0% |
| ATTGCTAAAGTCCATAACAT+GGG | - | chr8_2:46244065-46244084 | Msa1250510:intron | 30.0% | |
| AACAAGAATATCCCATGTTA+TGG | + | chr8_2:46244079-46244098 | None:intergenic | 30.0% | |
| TAGTCAGTTAGTCAAATAGT+TGG | - | chr8_2:46244210-46244229 | Msa1250510:intron | 30.0% | |
| GGAATGAACGAAATGTATAA+AGG | + | chr8_2:46244308-46244327 | None:intergenic | 30.0% | |
| AACTTCCAAAACATAGTGTT+TGG | - | chr8_2:46244655-46244674 | Msa1250510:intron | 30.0% | |
| AGTTATGACAGGAAAATGAA+TGG | + | chr8_2:46244786-46244805 | None:intergenic | 30.0% | |
| ! | TCTTAGTATATTTGCTGAGT+TGG | - | chr8_2:46244927-46244946 | Msa1250510:intron | 30.0% |
| AAGTAAAAGTTGACAGAAGA+AGG | - | chr8_2:46245184-46245203 | Msa1250510:intron | 30.0% | |
| GGAATAATCTAATCTTCGTA+TGG | + | chr8_2:46245339-46245358 | None:intergenic | 30.0% | |
| ATTCAAACTTAGGATTCTAG+TGG | + | chr8_2:46245613-46245632 | None:intergenic | 30.0% | |
| ACTAGAATCCTAAGTTTGAA+TGG | - | chr8_2:46245612-46245631 | Msa1250510:intron | 30.0% | |
| CTAGAATCCTAAGTTTGAAT+GGG | - | chr8_2:46245613-46245632 | Msa1250510:intron | 30.0% | |
| !! | GTTTGTTGCTCAAATTTTCA+GGG | + | chr8_2:46246055-46246074 | None:intergenic | 30.0% |
| !!! | AGTTTGTTGCTCAAATTTTC+AGG | + | chr8_2:46246056-46246075 | None:intergenic | 30.0% |
| GCAAAACAGATCATCAAAAT+TGG | - | chr8_2:46246214-46246233 | Msa1250510:intron | 30.0% | |
| ATAAACAGATATTGGTGCAA+TGG | + | chr8_2:46246453-46246472 | None:intergenic | 30.0% | |
| TTCATACCTGATGCTTATTA+TGG | + | chr8_2:46246572-46246591 | None:intergenic | 30.0% | |
| TGTGTCATATTGACAATCAT+TGG | + | chr8_2:46246610-46246629 | None:intergenic | 30.0% | |
| CACCCAACAACTATAAAAAT+AGG | - | chr8_2:46246706-46246725 | Msa1250510:intron | 30.0% | |
| !!! | CCCCTATTTTTATAGTTGTT+GGG | + | chr8_2:46246711-46246730 | None:intergenic | 30.0% |
| CCCAACAACTATAAAAATAG+GGG | - | chr8_2:46246708-46246727 | Msa1250510:intron | 30.0% | |
| CCAACAACTATAAAAATAGG+GGG | - | chr8_2:46246709-46246728 | Msa1250510:intron | 30.0% | |
| ATAAAAATAGGGGGAATACT+TGG | - | chr8_2:46246718-46246737 | Msa1250510:intron | 30.0% | |
| TAAAAATAGGGGGAATACTT+GGG | - | chr8_2:46246719-46246738 | Msa1250510:intron | 30.0% | |
| !! | TTCCCAATTACTTTTCACAT+AGG | - | chr8_2:46246847-46246866 | Msa1250510:intron | 30.0% |
| !! | TCCCAATTACTTTTCACATA+GGG | - | chr8_2:46246848-46246867 | Msa1250510:intron | 30.0% |
| AAAATAAAGGTCATGCTAAC+CGG | - | chr8_2:46246876-46246895 | Msa1250510:intron | 30.0% | |
| TATATTGCATGAAGAAAGTG+TGG | - | chr8_2:46247021-46247040 | Msa1250510:intron | 30.0% | |
| AAACAAAAGATTAACAGTGG+CGG | + | chr8_2:46247058-46247077 | None:intergenic | 30.0% | |
| AAGGATTGCTTAAGACATTA+AGG | - | chr8_2:46247249-46247268 | Msa1250510:intron | 30.0% | |
| AGGATTGCTTAAGACATTAA+GGG | - | chr8_2:46247250-46247269 | Msa1250510:intron | 30.0% | |
| ACTCAATTAAGGCTTATGAA+AGG | - | chr8_2:46247285-46247304 | Msa1250510:intron | 30.0% | |
| GGAAAAACCAAAAGCTATTA+GGG | - | chr8_2:46247398-46247417 | Msa1250510:intron | 30.0% | |
| !!! | GGTAATTTGTTTTCTAACGA+TGG | - | chr8_2:46247499-46247518 | Msa1250510:intron | 30.0% |
| ATTATGTAAACCCTGAAACA+AGG | + | chr8_2:46247633-46247652 | None:intergenic | 30.0% | |
| ATCAGGAGACAATAAAAGTA+TGG | - | chr8_2:46247660-46247679 | Msa1250510:intron | 30.0% | |
| AGCTTAATAACACATGGAAA+TGG | - | chr8_2:46247993-46248012 | Msa1250510:intron | 30.0% | |
| TGAATGGTTTGAAAGATGTT+TGG | + | chr8_2:46248080-46248099 | None:intergenic | 30.0% | |
| !!! | TTTTTTCCCTTCCCTTTTTT+GGG | + | chr8_2:46248497-46248516 | None:intergenic | 30.0% |
| !!! | TTTTTTTCCCTTCCCTTTTT+TGG | + | chr8_2:46248498-46248517 | None:intergenic | 30.0% |
| ATGGCATCAATATATACACA+TGG | + | chr8_2:46248546-46248565 | None:intergenic | 30.0% | |
| TATATATTGATGCCATGTGA+TGG | - | chr8_2:46248550-46248569 | Msa1250510:intron | 30.0% | |
| !!! | CTATTTTTATATGACATGGC+TGG | - | chr8_2:46248619-46248638 | Msa1250510:intron | 30.0% |
| CACAAATTTAGAAGTAGATG+TGG | - | chr8_2:46248647-46248666 | Msa1250510:intron | 30.0% | |
| AATTTAGAAGTAGATGTGGA+CGG | - | chr8_2:46248651-46248670 | Msa1250510:intron | 30.0% | |
| TACTGCTAAATGAACGATAA+AGG | + | chr8_2:46248776-46248795 | None:intergenic | 30.0% | |
| TTTATCGTTCATTTAGCAGT+AGG | - | chr8_2:46248775-46248794 | Msa1250510:intron | 30.0% | |
| ! | TACTATTAGCCTAAACCAAA+TGG | - | chr8_2:46248812-46248831 | Msa1250510:intron | 30.0% |
| ! | AACGAATTTCCATTTGGTTT+AGG | + | chr8_2:46248824-46248843 | None:intergenic | 30.0% |
| !! | GTTATAAGCAAGTTTGCTTT+TGG | - | chr8_2:46248916-46248935 | Msa1250510:five_prime_UTR | 30.0% |
| GTTAGTTAGTTACCTTGCTT+AGG | + | chr8_2:46242970-46242989 | None:intergenic | 35.0% | |
| CTATAATGACTATAGAGCTG+CGG | + | chr8_2:46243333-46243352 | None:intergenic | 35.0% | |
| CAAATATAAACATCCAGCCT+GGG | + | chr8_2:46243578-46243597 | None:intergenic | 35.0% | |
| CAGGCTGGATGTTTATATTT+GGG | - | chr8_2:46243577-46243596 | Msa1250510:CDS | 35.0% | |
| ! | GGATGTTTATATTTGGGACA+TGG | - | chr8_2:46243583-46243602 | Msa1250510:CDS | 35.0% |
| TAAGGAGTTGAGCAGTATAA+GGG | + | chr8_2:46243615-46243634 | None:intergenic | 35.0% | |
| GGCATATGATGATTTCAGTA+AGG | + | chr8_2:46243633-46243652 | None:intergenic | 35.0% | |
| CCACAACTAAAAACAATCCA+TGG | + | chr8_2:46243792-46243811 | None:intergenic | 35.0% | |
| !!! | CCATGGATTGTTTTTAGTTG+TGG | - | chr8_2:46243789-46243808 | Msa1250510:intron | 35.0% |
| TTAGTTGTGGAGAGTTAGTT+TGG | - | chr8_2:46243802-46243821 | Msa1250510:intron | 35.0% | |
| TTGGACAGAACATCAAGAAA+TGG | + | chr8_2:46243867-46243886 | None:intergenic | 35.0% | |
| GTTCTGTCCAAATATGATGA+TGG | - | chr8_2:46243876-46243895 | Msa1250510:CDS | 35.0% | |
| GGTTGAAGTCATAATCAGAT+AGG | + | chr8_2:46243908-46243927 | None:intergenic | 35.0% | |
| GACTTCAACCAAGATGAATT+AGG | - | chr8_2:46243918-46243937 | Msa1250510:CDS | 35.0% | |
| TATAGCCCAAAAATACTTGC+AGG | - | chr8_2:46243992-46244011 | Msa1250510:CDS | 35.0% | |
| ! | GTGTTACCTGCAAGTATTTT+TGG | + | chr8_2:46244001-46244020 | None:intergenic | 35.0% |
| !! | TAACACTTCTGGAGCATTAT+CGG | - | chr8_2:46244015-46244034 | Msa1250510:intron | 35.0% |
| CATTGCTAAAGTCCATAACA+TGG | - | chr8_2:46244064-46244083 | Msa1250510:intron | 35.0% | |
| ! | TACGCTTCATGTTTTCTTGA+TGG | - | chr8_2:46244154-46244173 | Msa1250510:CDS | 35.0% |
| !! | TTCATGTTTTCTTGATGGAC+TGG | - | chr8_2:46244159-46244178 | Msa1250510:CDS | 35.0% |
| !! | CTGGTTTGGTATATACTACA+TGG | - | chr8_2:46244178-46244197 | Msa1250510:CDS | 35.0% |
| ! | ACACTCCAAACACTATGTTT+TGG | + | chr8_2:46244663-46244682 | None:intergenic | 35.0% |
| !! | GTGTTTGGAGTGTTATTTGT+AGG | - | chr8_2:46244670-46244689 | Msa1250510:intron | 35.0% |
| !! | GTTTTAGGTAAAATGAAGGG+AGG | + | chr8_2:46244998-46245017 | None:intergenic | 35.0% |
| GTTGACAATTCATCAAGACA+TGG | - | chr8_2:46245042-46245061 | Msa1250510:intron | 35.0% | |
| ! | AGCTTAGGAAATTTGGTGAT+TGG | - | chr8_2:46245067-46245086 | Msa1250510:intron | 35.0% |
| ACAGAAGAAGGTAAGATGAA+GGG | - | chr8_2:46245196-46245215 | Msa1250510:intron | 35.0% | |
| ATACACTATGAGCACTTGTA+TGG | + | chr8_2:46245301-46245320 | None:intergenic | 35.0% | |
| ! | GAAGCACTTGTAATACACTA+TGG | + | chr8_2:46245373-46245392 | None:intergenic | 35.0% |
| CAAAGTTTCAAACAAGTGCT+CGG | - | chr8_2:46245227-46245246 | Msa1250510:intron | 35.0% | |
| CTCTTTGCTCTTAAGAATGT+GGG | + | chr8_2:46245526-46245545 | None:intergenic | 35.0% | |
| ACTCTTTGCTCTTAAGAATG+TGG | + | chr8_2:46245527-46245546 | None:intergenic | 35.0% | |
| CATTCTTAAGAGCAAAGAGT+CGG | - | chr8_2:46245527-46245546 | Msa1250510:intron | 35.0% | |
| ATTCTTAAGAGCAAAGAGTC+GGG | - | chr8_2:46245528-46245547 | Msa1250510:intron | 35.0% | |
| TTGGAATCCCATTCAAACTT+AGG | + | chr8_2:46245623-46245642 | None:intergenic | 35.0% | |
| !! | AATATCAAAAGGCTCTGAGT+TGG | + | chr8_2:46245642-46245661 | None:intergenic | 35.0% |
| !! | TTTTGAGAAGAGTTGCTCTT+TGG | - | chr8_2:46245660-46245679 | Msa1250510:intron | 35.0% |
| TTGTTGCACTGAAGTATGAA+CGG | + | chr8_2:46245902-46245921 | None:intergenic | 35.0% | |
| CATACTTCAGTGCAACAATT+CGG | - | chr8_2:46245904-46245923 | Msa1250510:intron | 35.0% | |
| ! | CTCTACCCAAACTTTTCATT+AGG | - | chr8_2:46246026-46246045 | Msa1250510:intron | 35.0% |
| GGAAGCCTAATGAAAAGTTT+GGG | + | chr8_2:46246034-46246053 | None:intergenic | 35.0% | |
| ! | TCGTTTTGTATAAATACCGG+AGG | - | chr8_2:46246255-46246274 | Msa1250510:intron | 35.0% |
| AAACGTTAGTTGTTGGGTAA+TGG | + | chr8_2:46246672-46246691 | None:intergenic | 35.0% | |
| !!! | CCCCCTATTTTTATAGTTGT+TGG | + | chr8_2:46246712-46246731 | None:intergenic | 35.0% |
| CAAAACGTGATGAAATTGCT+TGG | + | chr8_2:46246826-46246845 | None:intergenic | 35.0% | |
| GCCCTATGTGAAAAGTAATT+GGG | + | chr8_2:46246852-46246871 | None:intergenic | 35.0% | |
| AGCCCTATGTGAAAAGTAAT+TGG | + | chr8_2:46246853-46246872 | None:intergenic | 35.0% | |
| AAAGATGTGAGCAAAGGTTA+AGG | + | chr8_2:46246995-46247014 | None:intergenic | 35.0% | |
| AACAAAAGATTAACAGTGGC+GGG | + | chr8_2:46247057-46247076 | None:intergenic | 35.0% | |
| GGCAAACAAAAGATTAACAG+TGG | + | chr8_2:46247061-46247080 | None:intergenic | 35.0% | |
| AAAGTGTGTTATGCAAGCTA+AGG | + | chr8_2:46247228-46247247 | None:intergenic | 35.0% | |
| ! | GCTTGCATAACACACTTTTA+AGG | - | chr8_2:46247230-46247249 | Msa1250510:intron | 35.0% |
| ATTGCTTAAGACATTAAGGG+AGG | - | chr8_2:46247253-46247272 | Msa1250510:intron | 35.0% | |
| ! | GCTTGCATAACACACTTTTA+AGG | - | chr8_2:46247230-46247249 | Msa1250510:intron | 35.0% |
| !! | CACACTTTTAAGGATTGCTT+AGG | - | chr8_2:46247240-46247259 | Msa1250510:intron | 35.0% |
| !! | ACTTTTAAGGATTGCTTAGG+AGG | - | chr8_2:46247376-46247395 | Msa1250510:intron | 35.0% |
| !! | CTTTTAAGGATTGCTTAGGA+GGG | - | chr8_2:46247377-46247396 | Msa1250510:intron | 35.0% |
| GGGAAAAACCAAAAGCTATT+AGG | - | chr8_2:46247397-46247416 | Msa1250510:intron | 35.0% | |
| ! | TGCTAAACCCTAATAGCTTT+TGG | + | chr8_2:46247408-46247427 | None:intergenic | 35.0% |
| CATCTCCTATCTATAAGCAA+TGG | + | chr8_2:46247480-46247499 | None:intergenic | 35.0% | |
| CATTGCTTATAGATAGGAGA+TGG | - | chr8_2:46247478-46247497 | Msa1250510:intron | 35.0% | |
| ! | ATATTCTCTCTCCTTGTTTC+AGG | - | chr8_2:46247619-46247638 | Msa1250510:intron | 35.0% |
| ! | TATTCTCTCTCCTTGTTTCA+GGG | - | chr8_2:46247620-46247639 | Msa1250510:intron | 35.0% |
| CTGATGAATATACCGACAAA+TGG | - | chr8_2:46247702-46247721 | Msa1250510:intron | 35.0% | |
| TTCTGGTGAAAATAAAGACG+TGG | - | chr8_2:46247842-46247861 | Msa1250510:CDS | 35.0% | |
| !!! | GTGAATGTTTTAGTTACAGC+TGG | - | chr8_2:46247924-46247943 | Msa1250510:CDS | 35.0% |
| ! | AGCAAGCATTTTACAAGAGA+TGG | + | chr8_2:46247960-46247979 | None:intergenic | 35.0% |
| AAAATGCTTGCTCTTTCATC+TGG | - | chr8_2:46247968-46247987 | Msa1250510:CDS | 35.0% | |
| GGAAAATTCAATGTTTCCGA+TGG | - | chr8_2:46248216-46248235 | Msa1250510:CDS | 35.0% | |
| AAGCTGCAGAAATCATGAAA+TGG | - | chr8_2:46248306-46248325 | Msa1250510:CDS | 35.0% | |
| GATATACCACAGAGAAATAG+TGG | + | chr8_2:46248403-46248422 | None:intergenic | 35.0% | |
| TCTTCGTCATTGTCATTGTT+TGG | + | chr8_2:46248425-46248444 | None:intergenic | 35.0% | |
| TATACACATGGCAACACAAT+TGG | + | chr8_2:46248534-46248553 | None:intergenic | 35.0% | |
| TGCCACAACTTAGATGTTAA+CGG | - | chr8_2:46248574-46248593 | Msa1250510:intron | 35.0% | |
| ATTTAGAAGTAGATGTGGAC+GGG | - | chr8_2:46248652-46248671 | Msa1250510:intron | 35.0% | |
| CATCTTATATACATGAGCAG+AGG | + | chr8_2:46248698-46248717 | None:intergenic | 35.0% | |
| TTCATTTAGCAGTAGGAATG+TGG | - | chr8_2:46248782-46248801 | Msa1250510:intron | 35.0% | |
| TCATTTAGCAGTAGGAATGT+GGG | - | chr8_2:46248783-46248802 | Msa1250510:intron | 35.0% | |
| CAGATGAACGAATTTCCATT+TGG | + | chr8_2:46248830-46248849 | None:intergenic | 35.0% | |
| CTTGTGATAATAACTGTACG+AGG | + | chr8_2:46248875-46248894 | None:intergenic | 35.0% | |
| AGTTAGTTACCTTGCTTAGG+TGG | + | chr8_2:46242967-46242986 | None:intergenic | 40.0% | |
| TAACATTGTGCAATGAGTCG+TGG | - | chr8_2:46243456-46243475 | Msa1250510:CDS | 40.0% | |
| CCAAATATAAACATCCAGCC+TGG | + | chr8_2:46243579-46243598 | None:intergenic | 40.0% | |
| CCAGGCTGGATGTTTATATT+TGG | - | chr8_2:46243576-46243595 | Msa1250510:CDS | 40.0% | |
| GTAAGGAGTTGAGCAGTATA+AGG | + | chr8_2:46243616-46243635 | None:intergenic | 40.0% | |
| ACTGAAATCATCATATGCCG+AGG | - | chr8_2:46243634-46243653 | Msa1250510:intron | 40.0% | |
| !! | GTCCAAATATGATGATGGGA+AGG | - | chr8_2:46243881-46243900 | Msa1250510:CDS | 40.0% |
| GTCCTTCCCATCATCATATT+TGG | + | chr8_2:46243886-46243905 | None:intergenic | 40.0% | |
| ! | CTTTTGTTGGCATCATCATG+TGG | + | chr8_2:46243948-46243967 | None:intergenic | 40.0% |
| ATACTTGCAGGTAACACTTC+TGG | - | chr8_2:46244004-46244023 | Msa1250510:CDS | 40.0% | |
| !!! | GTTTTCTTGATGGACTGGTT+TGG | - | chr8_2:46244164-46244183 | Msa1250510:CDS | 40.0% |
| ATTTAGATAGCTGCGAACCT+AGG | - | chr8_2:46244703-46244722 | Msa1250510:intron | 40.0% | |
| TTTAGATAGCTGCGAACCTA+GGG | - | chr8_2:46244704-46244723 | Msa1250510:intron | 40.0% | |
| TGAGTTGCAAAACTTGCAAG+TGG | - | chr8_2:46244756-46244775 | Msa1250510:intron | 40.0% | |
| CATGGCAAGCTTAGGAAATT+TGG | - | chr8_2:46245060-46245079 | Msa1250510:intron | 40.0% | |
| GACAGAAGAAGGTAAGATGA+AGG | - | chr8_2:46245195-46245214 | Msa1250510:intron | 40.0% | |
| TACACTATGGCTCAGAGTTA+TGG | + | chr8_2:46245360-46245379 | None:intergenic | 40.0% | |
| TTAACTGTTCAACCTGAGAG+CGG | + | chr8_2:46245465-46245484 | None:intergenic | 40.0% | |
| !! | CTCTCAGGTTGAACAGTTAA+GGG | - | chr8_2:46245465-46245484 | Msa1250510:intron | 40.0% |
| GAAGGGTTATTGTCTATCGT+TGG | - | chr8_2:46245718-46245737 | Msa1250510:intron | 40.0% | |
| TGTAGTGCATTATGAGTCTC+AGG | + | chr8_2:46245768-46245787 | None:intergenic | 40.0% | |
| TGAAAAGTTTGGGTAGAGCA+CGG | + | chr8_2:46246024-46246043 | None:intergenic | 40.0% | |
| GGGAAGCCTAATGAAAAGTT+TGG | + | chr8_2:46246035-46246054 | None:intergenic | 40.0% | |
| ! | TCATAAAAGGTACATGTGCG+AGG | + | chr8_2:46246343-46246362 | None:intergenic | 40.0% |
| TGATGCAAAGATGTGAGCAA+AGG | + | chr8_2:46247001-46247020 | None:intergenic | 40.0% | |
| ACAAAAGATTAACAGTGGCG+GGG | + | chr8_2:46247056-46247075 | None:intergenic | 40.0% | |
| ! | GAGTCGTGAAACAATTTTGC+AGG | + | chr8_2:46247082-46247101 | None:intergenic | 40.0% |
| AAGACATTAAGGGAGGTAGT+TGG | - | chr8_2:46247260-46247279 | Msa1250510:intron | 40.0% | |
| GGTAGTTGGCAACTCAATTA+AGG | - | chr8_2:46247274-46247293 | Msa1250510:intron | 40.0% | |
| ACCAGCCATTGCTTATAGAT+AGG | - | chr8_2:46247472-46247491 | Msa1250510:intron | 40.0% | |
| TCCTATCTATAAGCAATGGC+TGG | + | chr8_2:46247476-46247495 | None:intergenic | 40.0% | |
| ACCTGATGAAAGCCATTTGT+CGG | + | chr8_2:46247717-46247736 | None:intergenic | 40.0% | |
| CTGGACAGCTTAATAACACA+TGG | - | chr8_2:46247987-46248006 | Msa1250510:intron | 40.0% | |
| TCATTTCAGTGTATAGCTCC+TGG | - | chr8_2:46248186-46248205 | Msa1250510:CDS | 40.0% | |
| CATTTCAGTGTATAGCTCCT+GGG | - | chr8_2:46248187-46248206 | Msa1250510:CDS | 40.0% | |
| TCAATGTTTCCGATGGATCA+AGG | - | chr8_2:46248223-46248242 | Msa1250510:CDS | 40.0% | |
| ATCACACAAAAGCGAACGTT+GGG | + | chr8_2:46248263-46248282 | None:intergenic | 40.0% | |
| AATCACACAAAAGCGAACGT+TGG | + | chr8_2:46248264-46248283 | None:intergenic | 40.0% | |
| !! | AACGTTCGCTTTTGTGTGAT+TGG | - | chr8_2:46248263-46248282 | Msa1250510:CDS | 40.0% |
| TTTGTGTGATTGGAGATGGA+TGG | - | chr8_2:46248273-46248292 | Msa1250510:CDS | 40.0% | |
| TTGTGTGATTGGAGATGGAT+GGG | - | chr8_2:46248274-46248293 | Msa1250510:CDS | 40.0% | |
| !! | CGCGGGTCAATTTTAACAAA+CGG | + | chr8_2:46248332-46248351 | None:intergenic | 40.0% |
| ! | GAAATAGTGGCCAACTGTTT+TGG | + | chr8_2:46248390-46248409 | None:intergenic | 40.0% |
| GGGAAAAAAAAACAGCAGCA+TGG | - | chr8_2:46248508-46248527 | Msa1250510:intron | 40.0% | |
| GCCACAACTTAGATGTTAAC+GGG | - | chr8_2:46248575-46248594 | Msa1250510:intron | 40.0% | |
| ACCCGTTAACATCTAAGTTG+TGG | + | chr8_2:46248579-46248598 | None:intergenic | 40.0% | |
| AAAGGTGAGATATGATGAGC+TGG | + | chr8_2:46248758-46248777 | None:intergenic | 40.0% | |
| AAATTCGTTCATCTGCAGTC+TGG | - | chr8_2:46248835-46248854 | Msa1250510:intron | 40.0% | |
| TGCGATGTGTTTGACAACAC+CGG | - | chr8_2:46243392-46243411 | Msa1250510:exon | 45.0% | |
| ! | AGTCGTGGTGTTTTTCTGCA+GGG | - | chr8_2:46243471-46243490 | Msa1250510:CDS | 45.0% |
| TATAAACATCCAGCCTGGGA+TGG | + | chr8_2:46243574-46243593 | None:intergenic | 45.0% | |
| TCATATGCCGAGGCTTTCAA+CGG | - | chr8_2:46243644-46243663 | Msa1250510:intron | 45.0% | |
| TTTCAGACCGTTGAAAGCCT+CGG | + | chr8_2:46243654-46243673 | None:intergenic | 45.0% | |
| GGTCTGAAAGATGTGCAGAA+AGG | - | chr8_2:46243665-46243684 | Msa1250510:intron | 45.0% | |
| !! | TGGAGAGTTAGTTTGGTGTC+CGG | - | chr8_2:46243809-46243828 | Msa1250510:intron | 45.0% |
| TGTTGGCATCATCATGTGGA+GGG | + | chr8_2:46243944-46243963 | None:intergenic | 45.0% | |
| TTGTTGGCATCATCATGTGG+AGG | + | chr8_2:46243945-46243964 | None:intergenic | 45.0% | |
| CACAGCAAAATACCATCCCT+AGG | + | chr8_2:46244723-46244742 | None:intergenic | 45.0% | |
| CATCAAGACATGGCAAGCTT+AGG | - | chr8_2:46245052-46245071 | Msa1250510:intron | 45.0% | |
| GAAGAAGGTAAGATGAAGGG+AGG | - | chr8_2:46245199-46245218 | Msa1250510:intron | 45.0% | |
| CACATTAGTTATCCGCTCTC+AGG | - | chr8_2:46245450-46245469 | Msa1250510:intron | 45.0% | |
| !! | GCTCTCAGGTTGAACAGTTA+AGG | - | chr8_2:46245464-46245483 | Msa1250510:intron | 45.0% |
| ! | CAGGTTGAACAGTTAAGGGT+CGG | - | chr8_2:46245469-46245488 | Msa1250510:intron | 45.0% |
| AAAGAGAAGCTCTTCGTTCC+CGG | - | chr8_2:46245561-46245580 | Msa1250510:intron | 45.0% | |
| TAGGATTCTAGTGGTTCCGT+AGG | + | chr8_2:46245604-46245623 | None:intergenic | 45.0% | |
| AAGTTGTAAGCTGTGCTCGA+AGG | - | chr8_2:46245700-46245719 | Msa1250510:intron | 45.0% | |
| AGTTGTAAGCTGTGCTCGAA+GGG | - | chr8_2:46245701-46245720 | Msa1250510:intron | 45.0% | |
| ! | TTGTCTATCGTTGGCCTCTA+TGG | - | chr8_2:46245727-46245746 | Msa1250510:intron | 45.0% |
| CCTCTATGGTAGAACCAGTT+GGG | - | chr8_2:46245741-46245760 | Msa1250510:intron | 45.0% | |
| CTCTATGGTAGAACCAGTTG+GGG | - | chr8_2:46245742-46245761 | Msa1250510:intron | 45.0% | |
| GAAAAGTTTGGGTAGAGCAC+GGG | + | chr8_2:46246023-46246042 | None:intergenic | 45.0% | |
| TCTACAAAACCAGCCCCATT+TGG | + | chr8_2:46246771-46246790 | None:intergenic | 45.0% | |
| TAATGTTAACCAGTGCCCCT+GGG | + | chr8_2:46246920-46246939 | None:intergenic | 45.0% | |
| ACCGACAAATGGCTTTCATC+AGG | - | chr8_2:46247713-46247732 | Msa1250510:intron | 45.0% | |
| ! | TTGAATTTTCCCCACTTCCC+AGG | + | chr8_2:46248207-46248226 | None:intergenic | 45.0% |
| TGAAACGCTCCTTGATCCAT+CGG | + | chr8_2:46248235-46248254 | None:intergenic | 45.0% | |
| ! | CGCTTTTGTGTGATTGGAGA+TGG | - | chr8_2:46248269-46248288 | Msa1250510:CDS | 45.0% |
| ! | TATGAGATTTTCCTGGTCGC+GGG | + | chr8_2:46248349-46248368 | None:intergenic | 45.0% |
| ! | CTATGAGATTTTCCTGGTCG+CGG | + | chr8_2:46248350-46248369 | None:intergenic | 45.0% |
| ! | GGGAACCTATGAGATTTTCC+TGG | + | chr8_2:46248356-46248375 | None:intergenic | 45.0% |
| GGAAAATCTCATAGGTTCCC+TGG | - | chr8_2:46248356-46248375 | Msa1250510:intron | 45.0% | |
| ! | AGTTGGCCACTATTTCTCTG+TGG | - | chr8_2:46248394-46248413 | Msa1250510:intron | 45.0% |
| ACAGACAGGATCACGGAAAA+GGG | + | chr8_2:46248472-46248491 | None:intergenic | 45.0% | |
| AACAGACAGGATCACGGAAA+AGG | + | chr8_2:46248473-46248492 | None:intergenic | 45.0% | |
| TCCTGTCTGTTGCCCAAAAA+AGG | - | chr8_2:46248482-46248501 | Msa1250510:intron | 45.0% | |
| CCTGTCTGTTGCCCAAAAAA+GGG | - | chr8_2:46248483-46248502 | Msa1250510:intron | 45.0% | |
| TCTGTTGCCCAAAAAAGGGA+AGG | - | chr8_2:46248487-46248506 | Msa1250510:intron | 45.0% | |
| CTGTTGCCCAAAAAAGGGAA+GGG | - | chr8_2:46248488-46248507 | Msa1250510:intron | 45.0% | |
| ATGAGCTGGTGACCAAGATA+AGG | + | chr8_2:46248744-46248763 | None:intergenic | 45.0% | |
| !! | TGATAAAATAAATATTTAAA+TGG | - | chr8_2:46245140-46245159 | Msa1250510:intron | 5.0% |
| !!! | AATAAATATTTAAGTTTTAA+AGG | + | chr8_2:46245275-46245294 | None:intergenic | 5.0% |
| !! | GTTAAAAAAAAATAAAAAAT+TGG | + | chr8_2:46246321-46246340 | None:intergenic | 5.0% |
| TCTCTGCAACCACCTAAGCA+AGG | - | chr8_2:46242955-46242974 | Msa1250510:three_prime_UTR | 50.0% | |
| ! | GAGTCGTGGTGTTTTTCTGC+AGG | - | chr8_2:46243470-46243489 | Msa1250510:CDS | 50.0% |
| ! | TTTTTCTGCAGGGCACAGCT+AGG | - | chr8_2:46243481-46243500 | Msa1250510:CDS | 50.0% |
| GCACAGCTAGGTTAGTGGAA+TGG | - | chr8_2:46243493-46243512 | Msa1250510:CDS | 50.0% | |
| CAGCTAGGTTAGTGGAATGG+CGG | - | chr8_2:46243496-46243515 | Msa1250510:CDS | 50.0% | |
| !! | TGCAGAAAGGTGTCGAGCTT+GGG | - | chr8_2:46243678-46243697 | Msa1250510:intron | 50.0% |
| GTGGAGGGCCTAATTCATCT+TGG | + | chr8_2:46243929-46243948 | None:intergenic | 50.0% | |
| CTTAAGAGCAAAGAGTCGGG+CGG | - | chr8_2:46245531-46245550 | Msa1250510:intron | 50.0% | |
| TCTCCTGTAGCTGGATCCTA+CGG | - | chr8_2:46245585-46245604 | Msa1250510:intron | 50.0% | |
| GCCTCTATGGTAGAACCAGT+TGG | - | chr8_2:46245740-46245759 | Msa1250510:intron | 50.0% | |
| !! | CCCAACTGGTTCTACCATAG+AGG | + | chr8_2:46245744-46245763 | None:intergenic | 50.0% |
| AACTCCTGCCACTGCCAAAT+GGG | - | chr8_2:46246754-46246773 | Msa1250510:intron | 50.0% | |
| GTAATGTTAACCAGTGCCCC+TGG | + | chr8_2:46246921-46246940 | None:intergenic | 50.0% | |
| ACCAGAACACTCCGTCAAAC+AGG | + | chr8_2:46247829-46247848 | None:intergenic | 50.0% | |
| AGTGTATAGCTCCTGGGAAG+TGG | - | chr8_2:46248193-46248212 | Msa1250510:CDS | 50.0% | |
| GTGTATAGCTCCTGGGAAGT+GGG | - | chr8_2:46248194-46248213 | Msa1250510:CDS | 50.0% | |
| TGTATAGCTCCTGGGAAGTG+GGG | - | chr8_2:46248195-46248214 | Msa1250510:CDS | 50.0% | |
| CACAAAAGCGAACGTTGGGA+TGG | + | chr8_2:46248259-46248278 | None:intergenic | 50.0% | |
| GTTAAAATTGACCCGCGACC+AGG | - | chr8_2:46248335-46248354 | Msa1250510:intron | 50.0% | |
| CGCGACCAGGAAAATCTCAT+AGG | - | chr8_2:46248348-46248367 | Msa1250510:intron | 50.0% | |
| !! | CTGTTTTGGATGTGAGGCCA+GGG | + | chr8_2:46248376-46248395 | None:intergenic | 50.0% |
| !! | ACTGTTTTGGATGTGAGGCC+AGG | + | chr8_2:46248377-46248396 | None:intergenic | 50.0% |
| GGCCTCACATCCAAAACAGT+TGG | - | chr8_2:46248377-46248396 | Msa1250510:intron | 50.0% | |
| !! | GGCCAACTGTTTTGGATGTG+AGG | + | chr8_2:46248382-46248401 | None:intergenic | 50.0% |
| TTGGGCAACAGACAGGATCA+CGG | + | chr8_2:46248479-46248498 | None:intergenic | 50.0% | |
| !!! | CCCTTTTTTGGGCAACAGAC+AGG | + | chr8_2:46248486-46248505 | None:intergenic | 50.0% |
| AAGTTGTGGCAGCCATCACA+TGG | + | chr8_2:46248565-46248584 | None:intergenic | 50.0% | |
| AGTGGAATGGCGGTTGCATC+TGG | - | chr8_2:46243506-46243525 | Msa1250510:CDS | 55.0% | |
| GTGGAATGGCGGTTGCATCT+GGG | - | chr8_2:46243507-46243526 | Msa1250510:CDS | 55.0% | |
| GGATGAGGGCGGATGAAACA+CGG | - | chr8_2:46243528-46243547 | Msa1250510:CDS | 55.0% | |
| GATGAGGGCGGATGAAACAC+GGG | - | chr8_2:46243529-46243548 | Msa1250510:CDS | 55.0% | |
| CCTGGGATGGATGTTGTCAC+TGG | + | chr8_2:46243561-46243580 | None:intergenic | 55.0% | |
| CCAGTGACAACATCCATCCC+AGG | - | chr8_2:46243558-46243577 | Msa1250510:CDS | 55.0% | |
| TGACAACATCCATCCCAGGC+TGG | - | chr8_2:46243562-46243581 | Msa1250510:CDS | 55.0% | |
| !! | GTGCAGAAAGGTGTCGAGCT+TGG | - | chr8_2:46243677-46243696 | Msa1250510:intron | 55.0% |
| TGTCGAGCTTGGGAAGACGT+GGG | - | chr8_2:46243688-46243707 | Msa1250510:intron | 55.0% | |
| GATAGCTGCGAACCTAGGGA+TGG | - | chr8_2:46244708-46244727 | Msa1250510:intron | 55.0% | |
| GATCCAGCTACAGGAGAACC+GGG | + | chr8_2:46245582-46245601 | None:intergenic | 55.0% | |
| GGATCCAGCTACAGGAGAAC+CGG | + | chr8_2:46245583-46245602 | None:intergenic | 55.0% | |
| GTTCCGTAGGATCCAGCTAC+AGG | + | chr8_2:46245591-46245610 | None:intergenic | 55.0% | |
| TATGAGTCTCAGGCCCCAAC+TGG | + | chr8_2:46245758-46245777 | None:intergenic | 55.0% | |
| GAACTCCTGCCACTGCCAAA+TGG | - | chr8_2:46246753-46246772 | Msa1250510:intron | 55.0% | |
| ACTCCTGCCACTGCCAAATG+GGG | - | chr8_2:46246755-46246774 | Msa1250510:intron | 55.0% | |
| AAACCAGCCCCATTTGGCAG+TGG | + | chr8_2:46246765-46246784 | None:intergenic | 55.0% | |
| ! | GACACTGGTTAAGGGGACAC+CGG | + | chr8_2:46246898-46246917 | None:intergenic | 55.0% |
| TCCCCTTAACCAGTGTCCCA+GGG | - | chr8_2:46246901-46246920 | Msa1250510:intron | 55.0% | |
| TTCAGCACGGGCCTGTTTGA+CGG | - | chr8_2:46247815-46247834 | Msa1250510:intron | 55.0% | |
| ! | GCCTGTTTGACGGAGTGTTC+TGG | - | chr8_2:46247825-46247844 | Msa1250510:intron | 55.0% |
| GCAGGGCACAGCTAGGTTAG+TGG | - | chr8_2:46243488-46243507 | Msa1250510:CDS | 60.0% | |
| ! | TGGCGGTTGCATCTGGGATG+AGG | - | chr8_2:46243513-46243532 | Msa1250510:CDS | 60.0% |
| ! | GGCGGTTGCATCTGGGATGA+GGG | - | chr8_2:46243514-46243533 | Msa1250510:CDS | 60.0% |
| ! | GGTTGCATCTGGGATGAGGG+CGG | - | chr8_2:46243517-46243536 | Msa1250510:CDS | 60.0% |
| GTGTCGAGCTTGGGAAGACG+TGG | - | chr8_2:46243687-46243706 | Msa1250510:intron | 60.0% | |
| GTTCCCGGTTCTCCTGTAGC+TGG | - | chr8_2:46245576-46245595 | Msa1250510:intron | 60.0% | |
| GTCCCCTTAACCAGTGTCCC+AGG | - | chr8_2:46246900-46246919 | Msa1250510:intron | 60.0% | |
| ! | CCCCTGGGACACTGGTTAAG+GGG | + | chr8_2:46246905-46246924 | None:intergenic | 60.0% |
| CCCCTTAACCAGTGTCCCAG+GGG | - | chr8_2:46246902-46246921 | Msa1250510:intron | 60.0% | |
| ! | GCCCCTGGGACACTGGTTAA+GGG | + | chr8_2:46246906-46246925 | None:intergenic | 60.0% |
| ! | TGCCCCTGGGACACTGGTTA+AGG | + | chr8_2:46246907-46246926 | None:intergenic | 60.0% |
| CAGCCCCATTTGGCAGTGGC+AGG | + | chr8_2:46246761-46246780 | None:intergenic | 65.0% | |
| CTGCCACTGCCAAATGGGGC+TGG | - | chr8_2:46246759-46246778 | Msa1250510:intron | 65.0% | |
| ! | AACCAGTGTCCCAGGGGCAC+TGG | - | chr8_2:46246908-46246927 | Msa1250510:intron | 65.0% |
| AACCAGTGCCCCTGGGACAC+TGG | + | chr8_2:46246913-46246932 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 46242904 | 46248939 | 46242904 | ID=Msa1250510;Name=Msa1250510 |
| chr8_2 | mRNA | 46242904 | 46248939 | 46242904 | ID=Msa1250510-mRNA-1;Parent=Msa1250510;Name=Msa1250510-mRNA-1;_AED=0.04;_eAED=0.04;_QI=93|1|1|1|0.5|0.42|7|435|318 |
| chr8_2 | exon | 46242904 | 46242990 | 46242904 | ID=Msa1250510-mRNA-1:exon:13925;Parent=Msa1250510-mRNA-1 |
| chr8_2 | exon | 46243047 | 46243648 | 46243047 | ID=Msa1250510-mRNA-1:exon:13924;Parent=Msa1250510-mRNA-1 |
| chr8_2 | exon | 46243829 | 46244023 | 46243829 | ID=Msa1250510-mRNA-1:exon:13923;Parent=Msa1250510-mRNA-1 |
| chr8_2 | exon | 46244109 | 46244202 | 46244109 | ID=Msa1250510-mRNA-1:exon:13922;Parent=Msa1250510-mRNA-1 |
| chr8_2 | exon | 46247830 | 46247997 | 46247830 | ID=Msa1250510-mRNA-1:exon:13921;Parent=Msa1250510-mRNA-1 |
| chr8_2 | exon | 46248086 | 46248351 | 46248086 | ID=Msa1250510-mRNA-1:exon:13920;Parent=Msa1250510-mRNA-1 |
| chr8_2 | exon | 46248867 | 46248939 | 46248867 | ID=Msa1250510-mRNA-1:exon:13919;Parent=Msa1250510-mRNA-1 |
| chr8_2 | five_prime_UTR | 46248867 | 46248939 | 46248867 | ID=Msa1250510-mRNA-1:five_prime_utr;Parent=Msa1250510-mRNA-1 |
| chr8_2 | five_prime_UTR | 46248332 | 46248351 | 46248332 | ID=Msa1250510-mRNA-1:five_prime_utr;Parent=Msa1250510-mRNA-1 |
| chr8_2 | CDS | 46248086 | 46248331 | 46248086 | ID=Msa1250510-mRNA-1:cds;Parent=Msa1250510-mRNA-1 |
| chr8_2 | CDS | 46247830 | 46247997 | 46247830 | ID=Msa1250510-mRNA-1:cds;Parent=Msa1250510-mRNA-1 |
| chr8_2 | CDS | 46244109 | 46244202 | 46244109 | ID=Msa1250510-mRNA-1:cds;Parent=Msa1250510-mRNA-1 |
| chr8_2 | CDS | 46243829 | 46244023 | 46243829 | ID=Msa1250510-mRNA-1:cds;Parent=Msa1250510-mRNA-1 |
| chr8_2 | CDS | 46243395 | 46243648 | 46243395 | ID=Msa1250510-mRNA-1:cds;Parent=Msa1250510-mRNA-1 |
| chr8_2 | three_prime_UTR | 46243047 | 46243394 | 46243047 | ID=Msa1250510-mRNA-1:three_prime_utr;Parent=Msa1250510-mRNA-1 |
| chr8_2 | three_prime_UTR | 46242904 | 46242990 | 46242904 | ID=Msa1250510-mRNA-1:three_prime_utr;Parent=Msa1250510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
