AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1297920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297920 MtrunA17_Chr4g0055201 90.831 349 14 8 1 348 1 332 0.0 530
Msa1297920 MtrunA17_Chr5g0400041 56.510 361 118 9 1 348 1 335 2.91e-112 330
Msa1297920 MtrunA17_Chr1g0153261 32.184 261 145 6 94 347 105 340 5.82e-33 125
Msa1297920 MtrunA17_Chr4g0043501 31.193 218 142 3 133 348 82 293 2.32e-30 117
Msa1297920 MtrunA17_Chr2g0311981 30.952 252 134 6 134 348 118 366 4.53e-29 115
Msa1297920 MtrunA17_Chr4g0018631 29.648 199 120 3 152 346 28 210 5.61e-26 103
Msa1297920 MtrunA17_Chr3g0145641 35.294 187 98 5 161 347 19 182 8.47e-26 102
Msa1297920 MtrunA17_Chr8g0358261 27.273 220 120 2 159 347 99 309 6.98e-25 102
Msa1297920 MtrunA17_Chr2g0291661 30.348 201 128 3 155 348 124 319 2.33e-23 98.6
Msa1297920 MtrunA17_Chr4g0017931 27.160 243 138 10 118 345 30 248 1.38e-12 67.0
Msa1297920 MtrunA17_Chr4g0017891 26.923 208 124 7 143 345 64 248 3.83e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1297920 AT1G32740.1 43.213 361 141 12 1 347 1 311 4.89e-77 239
Msa1297920 AT1G32740.4 42.941 340 136 10 21 347 6 300 5.06e-73 229
Msa1297920 AT4G17680.1 40.909 352 148 10 1 347 18 314 2.00e-69 220
Msa1297920 AT5G47050.1 42.659 361 133 12 1 348 1 300 5.41e-69 218
Msa1297920 AT1G32740.3 43.243 296 122 6 63 347 7 267 2.06e-67 213
Msa1297920 AT1G32740.2 43.243 296 122 6 63 347 7 267 2.06e-67 213
Msa1297920 AT4G17680.2 44.030 268 114 6 85 347 6 242 3.55e-61 196
Msa1297920 AT4G17680.3 48.634 183 84 4 170 347 13 190 7.16e-46 155
Msa1297920 AT1G10650.2 31.399 293 175 6 67 348 6 283 4.81e-42 148
Msa1297920 AT1G10650.1 31.399 293 175 6 67 348 62 339 6.46e-42 149
Msa1297920 AT1G60610.2 29.482 251 159 2 103 347 101 339 1.49e-36 135
Msa1297920 AT1G60610.4 29.482 251 159 2 103 347 101 339 1.49e-36 135
Msa1297920 AT1G60610.1 29.482 251 159 2 103 347 101 339 1.49e-36 135
Msa1297920 AT1G60610.5 29.482 251 159 2 103 347 101 339 1.49e-36 135
Msa1297920 AT1G60610.3 29.482 251 159 2 103 347 101 339 1.49e-36 135
Msa1297920 AT1G45976.1 29.528 254 154 4 94 347 97 325 3.70e-30 117
Msa1297920 AT5G45100.2 34.634 205 128 2 146 348 66 266 2.08e-29 114
Msa1297920 AT5G45100.1 34.634 205 128 2 146 348 93 293 3.14e-29 114
Msa1297920 AT4G19700.1 35.407 209 128 4 143 348 99 303 1.46e-28 112
Msa1297920 AT4G35070.1 33.668 199 118 5 155 347 74 264 3.60e-28 110
Msa1297920 AT4G35070.2 33.668 199 118 5 155 347 19 209 1.69e-27 107
Msa1297920 AT3G12920.1 28.372 215 133 4 150 348 125 334 8.20e-26 106
Msa1297920 AT1G79110.3 29.717 212 129 3 155 348 123 332 3.34e-25 104
Msa1297920 AT1G79110.2 29.717 212 129 3 155 348 145 354 3.56e-25 104
Msa1297920 AT1G79110.1 29.767 215 128 4 155 348 145 357 6.36e-24 101

Find 117 sgRNAs with CRISPR-Local

Find 285 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTCTATTTATTTAATT+TGG 0.150082 8_3:-58529996 Msa1297920:three_prime_UTR
GAGAAGCTGCTGCGGCTTCT+TGG 0.157550 8_3:+58530577 None:intergenic
CTTGGGCTTCCATGGTTAAC+TGG 0.230665 8_3:+58530622 None:intergenic
AGAAGCTGCTGCGGCTTCTT+GGG 0.245232 8_3:+58530578 None:intergenic
ACAATAACAATAAATTATTT+AGG 0.246703 8_3:+58530209 None:intergenic
GACCTCAACGGTTGAATTCT+TGG 0.268543 8_3:+58530287 None:intergenic
GTTGAGGGAGGGAGGGAGGG+AGG 0.298421 8_3:+58531677 None:intergenic
TACATTACCAAATAAAAGTT+TGG 0.303341 8_3:-58530098 Msa1297920:three_prime_UTR
CTGCTGCGGCTTCTTGGGCC+CGG 0.325466 8_3:+58530583 None:intergenic
ACATTATTGTTTGTTGCAGC+TGG 0.326439 8_3:+58530547 None:intergenic
AAGAGAGAGCGAGCAGAATA+AGG 0.327515 8_3:-58531771 Msa1297920:five_prime_UTR
GTTGTTGTTGTTGAGATTGT+TGG 0.334601 8_3:+58531019 None:intergenic
TTTAGAAGAAGAATATTTGA+TGG 0.355647 8_3:+58531604 None:intergenic
TCTCTTCTCTCTATTGTTGA+GGG 0.362553 8_3:+58531662 None:intergenic
AGAGAGAAGAGAAGAATAAC+AGG 0.366849 8_3:-58531651 Msa1297920:five_prime_UTR
TGCTGCGGCTTCTTGGGCCC+GGG 0.374579 8_3:+58530584 None:intergenic
CAACAACCATCAGGAGCATT+AGG 0.380479 8_3:-58531409 Msa1297920:CDS
TAAACAACAACAACAATAAC+AGG 0.387069 8_3:-58531585 Msa1297920:intron
TTACCTGGGTTTGAAGATAT+TGG 0.390243 8_3:+58530908 None:intergenic
CCACTTCTTTCTCTCTTAAC+CGG 0.391453 8_3:+58530694 None:intergenic
GTTGTTGATGATGATGATTA+TGG 0.394349 8_3:+58531121 None:intergenic
CTGCCAAACTTGGGCTTCCA+TGG 0.411772 8_3:+58530614 None:intergenic
GAGAAATGATTAATAACGTT+AGG 0.416596 8_3:+58531186 None:intergenic
TAACCATGGAAGCCCAAGTT+TGG 0.419591 8_3:-58530617 Msa1297920:CDS
TTCTTGGGAGTAAAGCAAAC+AGG 0.420487 8_3:+58530303 None:intergenic
GTGGAAGTTGCGGCGGCGCG+TGG 0.427360 8_3:-58530426 Msa1297920:CDS
GCAGAATAAGGTGTCTCTCT+TGG 0.432226 8_3:-58531759 Msa1297920:five_prime_UTR
TTCTCTTCTCTCTATTGTTG+AGG 0.433027 8_3:+58531661 None:intergenic
ACCTCAACGGTTGAATTCTT+GGG 0.433219 8_3:+58530288 None:intergenic
CTCTATTGTTGAGGGAGGGA+GGG 0.433571 8_3:+58531670 None:intergenic
TTGAGGGAGGGAGGGAGGGA+GGG 0.437776 8_3:+58531678 None:intergenic
AGAAATGATTAATAACGTTA+GGG 0.438438 8_3:+58531187 None:intergenic
GTAGTTGTAAAGAAAAGAAA+AGG 0.445047 8_3:-58531803 Msa1297920:five_prime_UTR
CATTATTGTTTGTTGCAGCT+GGG 0.449091 8_3:+58530548 None:intergenic
GAGAATGATGAGTTTGATCA+AGG 0.454798 8_3:+58531377 None:intergenic
CGGAGGAAGCGGTGGCGCAC+CGG 0.460350 8_3:-58530713 Msa1297920:CDS
CAACAAAATGTTGTCTCTAC+TGG 0.461189 8_3:-58531102 Msa1297920:CDS
TGCCAAACCGGCGAAGATGC+TGG 0.461739 8_3:-58530525 Msa1297920:CDS
CAAACAATAATGTGCCAAAC+CGG 0.462431 8_3:-58530537 Msa1297920:CDS
GCCGGCGCCAGCATCTTCGC+CGG 0.462494 8_3:+58530518 None:intergenic
CATGGAAGCCCAAGTTTGGC+AGG 0.462548 8_3:-58530613 Msa1297920:CDS
GGCGAAGATGCTGGCGCCGG+CGG 0.463533 8_3:-58530516 Msa1297920:CDS
CCATGGTTAACTGGGCCGTA+CGG 0.463723 8_3:+58530631 None:intergenic
CATGGTTAACTGGGCCGTAC+GGG 0.464465 8_3:+58530632 None:intergenic
AAGTTTGGCAGGCAAAAGCC+CGG 0.469144 8_3:-58530602 Msa1297920:CDS
TCCTGATGGTTGTTGTTGTA+AGG 0.471740 8_3:+58531417 None:intergenic
TGAATAATTTGAGAAGGTTG+AGG 0.479716 8_3:+58531156 None:intergenic
TTCATGCGGCATGGAAGGAC+AGG 0.481128 8_3:-58530490 Msa1297920:CDS
ATTGTTCATATACTAGTCTC+TGG 0.486629 8_3:-58530191 Msa1297920:three_prime_UTR
ATTTGGTGTAAGTGTGTGTA+AGG 0.488842 8_3:-58531858 None:intergenic
GCAACTTCCACCACTCTATC+CGG 0.488965 8_3:+58530438 None:intergenic
TTCTCTCTATTGTTGAGGGA+GGG 0.499938 8_3:+58531666 None:intergenic
TAAAGCAAACAGGGCAAACT+CGG 0.499969 8_3:+58530313 None:intergenic
ACTAAACGCGGCGGAGGAAG+CGG 0.504819 8_3:-58530724 Msa1297920:CDS
GGCGTTTCATGCGGCATGGA+AGG 0.505182 8_3:-58530495 Msa1297920:CDS
TCTCTATTGTTGAGGGAGGG+AGG 0.506421 8_3:+58531669 None:intergenic
ACAGGCTGAGGATGCTGAAT+CGG 0.511167 8_3:-58530472 Msa1297920:CDS
AACAGCAGAAATGGACAAGA+AGG 0.511556 8_3:-58531451 Msa1297920:intron
CGGCGGCGTTTCATGCGGCA+TGG 0.521608 8_3:-58530499 Msa1297920:CDS
GAAAGATGAATAATTTGAGA+AGG 0.525108 8_3:+58531150 None:intergenic
GCGGCGCGTGGGAAATGTAG+AGG 0.525683 8_3:-58530414 Msa1297920:CDS
TTGTGTTGTTATTGTTGCAT+AGG 0.525698 8_3:+58531347 None:intergenic
CTTCTCTCTATTGTTGAGGG+AGG 0.525887 8_3:+58531665 None:intergenic
AGAAAATCTACGTCGGACAT+TGG 0.525889 8_3:-58530778 Msa1297920:CDS
GGCGCCGGCGGCGTTTCATG+CGG 0.528288 8_3:-58530504 Msa1297920:CDS
ACCGGCGAAGATGCTGGCGC+CGG 0.529216 8_3:-58530519 Msa1297920:CDS
TTGGGCTTCCATGGTTAACT+GGG 0.531712 8_3:+58530623 None:intergenic
GTGTGAAAAGCGCGTGGCAA+CGG 0.533579 8_3:-58530391 Msa1297920:CDS
TCCTTACAACAACAACCATC+AGG 0.538919 8_3:-58531418 Msa1297920:CDS
TGAATCGGCTTATATTGATC+CGG 0.538942 8_3:-58530457 Msa1297920:CDS
TCTCGCAAGAGAGGAAGAGA+AGG 0.542174 8_3:-58531216 Msa1297920:CDS
TATTGTTGAGGGAGGGAGGG+AGG 0.544225 8_3:+58531673 None:intergenic
ATTGTTGAGGGAGGGAGGGA+GGG 0.546933 8_3:+58531674 None:intergenic
CGCGGAGTTAGAAGCCCGTA+CGG 0.547599 8_3:-58530646 Msa1297920:CDS
TGGAAGTTGCGGCGGCGCGT+GGG 0.555769 8_3:-58530425 Msa1297920:CDS
GTCGGACATTGGCGGAGAAG+AGG 0.560211 8_3:-58530767 Msa1297920:CDS
TAACTCCGCGTTCCTGCGTG+TGG 0.564816 8_3:+58530659 None:intergenic
AGGTAAGGTAGAATAAGAAG+AGG 0.572929 8_3:-58531838 Msa1297920:five_prime_UTR
AAATCTACGTCGGACATTGG+CGG 0.575341 8_3:-58530775 Msa1297920:CDS
GGAGCTACTAAACGCGGCGG+AGG 0.576161 8_3:-58530730 Msa1297920:CDS
CCGCCGCGTTTAGTAGCTCC+CGG 0.576958 8_3:+58530733 None:intergenic
CGGCATGGAAGGACAGGCTG+AGG 0.579309 8_3:-58530484 Msa1297920:CDS
GGATAGAGTGGTGGAAGTTG+CGG 0.586457 8_3:-58530436 Msa1297920:CDS
GTGTAAGTGTGTGTAAGGTA+AGG 0.588397 8_3:-58531853 Msa1297920:five_prime_UTR
GATAGTCCTAATGCTCCTGA+TGG 0.592559 8_3:+58531403 None:intergenic
CGGCGCGTGGGAAATGTAGA+GGG 0.594790 8_3:-58530413 Msa1297920:CDS
TCCCAAGAATTCAACCGTTG+AGG 0.595204 8_3:-58530289 Msa1297920:CDS
CATGCCGCATGAAACGCCGC+CGG 0.601667 8_3:+58530500 None:intergenic
CAAACACACAAATGCCGACA+AGG 0.601757 8_3:+58530357 None:intergenic
AGTTTGGCAGGCAAAAGCCC+GGG 0.603313 8_3:-58530601 Msa1297920:CDS
TGAAAAGCGCGTGGCAACGG+TGG 0.613660 8_3:-58530388 Msa1297920:CDS
AAACGCGGCGGAGGAAGCGG+TGG 0.615069 8_3:-58530721 Msa1297920:CDS
GGTACAAATTCTCGCAAGAG+AGG 0.618293 8_3:-58531225 Msa1297920:CDS
TTATATTGATCCGGATAGAG+TGG 0.619420 8_3:-58530448 Msa1297920:CDS
CATGTACATTCATTAACCAA+AGG 0.627810 8_3:+58530053 None:intergenic
ATTTGAGAAACAATTCCTTG+TGG 0.628054 8_3:+58530955 None:intergenic
GGCTTGCAGAGAAGCTGCTG+CGG 0.629802 8_3:+58530569 None:intergenic
TTCTCATCTCTATTACCACA+AGG 0.635335 8_3:-58530970 Msa1297920:CDS
AAAAGCCACACGCAGGAACG+CGG 0.638954 8_3:-58530664 Msa1297920:CDS
GAAATGATTAATAACGTTAG+GGG 0.644550 8_3:+58531188 None:intergenic
TAGAGTGGTGGAAGTTGCGG+CGG 0.644629 8_3:-58530433 Msa1297920:CDS
ACAGCAGAAATGGACAAGAA+GGG 0.646393 8_3:-58531450 Msa1297920:intron
ATGACCACATGGTTAACAAG+TGG 0.650500 8_3:-58530033 Msa1297920:three_prime_UTR
CCGGTTAAGAGAGAAAGAAG+TGG 0.657511 8_3:-58530694 Msa1297920:CDS
TCTTGGGAGTAAAGCAAACA+GGG 0.657653 8_3:+58530304 None:intergenic
TATTGATCCGGATAGAGTGG+TGG 0.662721 8_3:-58530445 Msa1297920:CDS
AGACCAATATCTTCAAACCC+AGG 0.667723 8_3:-58530911 Msa1297920:intron
GATCATCGAATGATAAACGA+AGG 0.668352 8_3:+58531079 None:intergenic
AATGAATGTACATGACCACA+TGG 0.669572 8_3:-58530044 Msa1297920:three_prime_UTR
CCGTACGGCCCAGTTAACCA+TGG 0.682954 8_3:-58530631 Msa1297920:CDS
TAGAGGGTGTGAAAAGCGCG+TGG 0.693793 8_3:-58530397 Msa1297920:CDS
TTCAGGGAGAAAATCTACGT+CGG 0.694834 8_3:-58530785 Msa1297920:intron
AATTCGCAAAAGCCACACGC+AGG 0.700324 8_3:-58530671 Msa1297920:CDS
CTAAGAGAGAAAGACCTCAA+CGG 0.702666 8_3:+58530275 None:intergenic
AATGCCACTTGTTAACCATG+TGG 0.717135 8_3:+58530029 None:intergenic
TTACCGGGAGCTACTAAACG+CGG 0.757971 8_3:-58530736 Msa1297920:CDS
CCGGGAGCTACTAAACGCGG+CGG 0.776946 8_3:-58530733 Msa1297920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAGTATTTTTTCTTTTTT+TGG + chr8_3:58531593-58531612 None:intergenic 10.0%
!! ACAATAACAATAAATTATTT+AGG + chr8_3:58531630-58531649 None:intergenic 10.0%
!!! ATTAGTATTTTTTCTTTTTT+TGG + chr8_3:58531593-58531612 None:intergenic 10.0%
!! ACAATAACAATAAATTATTT+AGG + chr8_3:58531630-58531649 None:intergenic 10.0%
!!! AATGGAAAATTTTGAAAATT+GGG + chr8_3:58530997-58531016 None:intergenic 15.0%
!!! AAATGGAAAATTTTGAAAAT+TGG + chr8_3:58530998-58531017 None:intergenic 15.0%
!!! AATATACATTTTCGAATAAA+TGG + chr8_3:58531015-58531034 None:intergenic 15.0%
!!! AAATGTATATTTTGAATGTT+TGG - chr8_3:58531024-58531043 Msa1297920:CDS 15.0%
!!! AATGTATATTTTGAATGTTT+GGG - chr8_3:58531025-58531044 Msa1297920:CDS 15.0%
!!! AATTTGGTTATTTATTTCTT+TGG - chr8_3:58531856-58531875 Msa1297920:five_prime_UTR 15.0%
!!! AATGGAAAATTTTGAAAATT+GGG + chr8_3:58530997-58531016 None:intergenic 15.0%
!!! AAATGGAAAATTTTGAAAAT+TGG + chr8_3:58530998-58531017 None:intergenic 15.0%
!!! AATATACATTTTCGAATAAA+TGG + chr8_3:58531015-58531034 None:intergenic 15.0%
!!! AAATGTATATTTTGAATGTT+TGG - chr8_3:58531024-58531043 Msa1297920:CDS 15.0%
!!! AATGTATATTTTGAATGTTT+GGG - chr8_3:58531025-58531044 Msa1297920:CDS 15.0%
!! TTTAGAAGAAGAATATTTGA+TGG + chr8_3:58530235-58530254 None:intergenic 20.0%
!!! TCATTTAGAATTGTATTTGA+GGG + chr8_3:58530318-58530337 None:intergenic 20.0%
!! AGAAATGATTAATAACGTTA+GGG + chr8_3:58530652-58530671 None:intergenic 20.0%
!! TACATTACCAAATAAAAGTT+TGG - chr8_3:58531738-58531757 Msa1297920:five_prime_UTR 20.0%
!!! ACTAAAACCAAACTTTTATT+TGG + chr8_3:58531748-58531767 None:intergenic 20.0%
!!! TAGATTTTCATTTTTACCTT+TGG - chr8_3:58531767-58531786 Msa1297920:five_prime_UTR 20.0%
!! TTTAGAAGAAGAATATTTGA+TGG + chr8_3:58530235-58530254 None:intergenic 20.0%
!!! TCATTTAGAATTGTATTTGA+GGG + chr8_3:58530318-58530337 None:intergenic 20.0%
!! AGAAATGATTAATAACGTTA+GGG + chr8_3:58530652-58530671 None:intergenic 20.0%
!! TACATTACCAAATAAAAGTT+TGG - chr8_3:58531738-58531757 Msa1297920:five_prime_UTR 20.0%
!!! ACTAAAACCAAACTTTTATT+TGG + chr8_3:58531748-58531767 None:intergenic 20.0%
!!! TAGATTTTCATTTTTACCTT+TGG - chr8_3:58531767-58531786 Msa1297920:five_prime_UTR 20.0%
! GTAGTTGTAAAGAAAAGAAA+AGG - chr8_3:58530033-58530052 Msa1297920:three_prime_UTR 25.0%
! TAAACAACAACAACAATAAC+AGG - chr8_3:58530251-58530270 Msa1297920:three_prime_UTR 25.0%
!! GTCATTTAGAATTGTATTTG+AGG + chr8_3:58530319-58530338 None:intergenic 25.0%
! GAGAAAAGAGATTGATTAAT+TGG + chr8_3:58530354-58530373 None:intergenic 25.0%
! GAAATGATTAATAACGTTAG+GGG + chr8_3:58530651-58530670 None:intergenic 25.0%
! GAGAAATGATTAATAACGTT+AGG + chr8_3:58530653-58530672 None:intergenic 25.0%
! GAAAGATGAATAATTTGAGA+AGG + chr8_3:58530689-58530708 None:intergenic 25.0%
!!! TTGTTTTGTTTTGTTTACCT+GGG + chr8_3:58530945-58530964 None:intergenic 25.0%
!!! TTTGTTTTGTTTTGTTTACC+TGG + chr8_3:58530946-58530965 None:intergenic 25.0%
! GTAGTTGTAAAGAAAAGAAA+AGG - chr8_3:58530033-58530052 Msa1297920:three_prime_UTR 25.0%
! TAAACAACAACAACAATAAC+AGG - chr8_3:58530251-58530270 Msa1297920:three_prime_UTR 25.0%
!! GTCATTTAGAATTGTATTTG+AGG + chr8_3:58530319-58530338 None:intergenic 25.0%
! GAGAAAAGAGATTGATTAAT+TGG + chr8_3:58530354-58530373 None:intergenic 25.0%
! GAAATGATTAATAACGTTAG+GGG + chr8_3:58530651-58530670 None:intergenic 25.0%
! GAGAAATGATTAATAACGTT+AGG + chr8_3:58530653-58530672 None:intergenic 25.0%
! GAAAGATGAATAATTTGAGA+AGG + chr8_3:58530689-58530708 None:intergenic 25.0%
!!! TTGTTTTGTTTTGTTTACCT+GGG + chr8_3:58530945-58530964 None:intergenic 25.0%
!!! TTTGTTTTGTTTTGTTTACC+TGG + chr8_3:58530946-58530965 None:intergenic 25.0%
! TTGTGTTGTTATTGTTGCAT+AGG + chr8_3:58530492-58530511 None:intergenic 30.0%
TGAATAATTTGAGAAGGTTG+AGG + chr8_3:58530683-58530702 None:intergenic 30.0%
!! GTTGTTGATGATGATGATTA+TGG + chr8_3:58530718-58530737 None:intergenic 30.0%
ATTTGAGAAACAATTCCTTG+TGG + chr8_3:58530884-58530903 None:intergenic 30.0%
TTTGAATGTTTGGGTATTTC+AGG - chr8_3:58531034-58531053 Msa1297920:CDS 30.0%
TTGAATGTTTGGGTATTTCA+GGG - chr8_3:58531035-58531054 Msa1297920:CDS 30.0%
! ATTGTTCATATACTAGTCTC+TGG - chr8_3:58531645-58531664 Msa1297920:exon 30.0%
CATGTACATTCATTAACCAA+AGG + chr8_3:58531786-58531805 None:intergenic 30.0%
! TTGTGTTGTTATTGTTGCAT+AGG + chr8_3:58530492-58530511 None:intergenic 30.0%
TGAATAATTTGAGAAGGTTG+AGG + chr8_3:58530683-58530702 None:intergenic 30.0%
!! GTTGTTGATGATGATGATTA+TGG + chr8_3:58530718-58530737 None:intergenic 30.0%
ATTTGAGAAACAATTCCTTG+TGG + chr8_3:58530884-58530903 None:intergenic 30.0%
TTTGAATGTTTGGGTATTTC+AGG - chr8_3:58531034-58531053 Msa1297920:CDS 30.0%
TTGAATGTTTGGGTATTTCA+GGG - chr8_3:58531035-58531054 Msa1297920:CDS 30.0%
! ATTGTTCATATACTAGTCTC+TGG - chr8_3:58531645-58531664 Msa1297920:exon 30.0%
CATGTACATTCATTAACCAA+AGG + chr8_3:58531786-58531805 None:intergenic 30.0%
AGGTAAGGTAGAATAAGAAG+AGG - chr8_3:58529998-58530017 Msa1297920:three_prime_UTR 35.0%
TCTCTTCTCTCTATTGTTGA+GGG + chr8_3:58530177-58530196 None:intergenic 35.0%
TTCTCTTCTCTCTATTGTTG+AGG + chr8_3:58530178-58530197 None:intergenic 35.0%
AGAGAGAAGAGAAGAATAAC+AGG - chr8_3:58530185-58530204 Msa1297920:three_prime_UTR 35.0%
! TCTTTTCCTAACAGCAGAAA+TGG - chr8_3:58530376-58530395 Msa1297920:CDS 35.0%
GAGAATGATGAGTTTGATCA+AGG + chr8_3:58530462-58530481 None:intergenic 35.0%
CAACAAAATGTTGTCTCTAC+TGG - chr8_3:58530734-58530753 Msa1297920:CDS 35.0%
GATCATCGAATGATAAACGA+AGG + chr8_3:58530760-58530779 None:intergenic 35.0%
! GTTGTTGTTGTTGAGATTGT+TGG + chr8_3:58530820-58530839 None:intergenic 35.0%
CAACAACAACAACAACAACA+AGG - chr8_3:58530827-58530846 Msa1297920:intron 35.0%
TTCTCATCTCTATTACCACA+AGG - chr8_3:58530866-58530885 Msa1297920:intron 35.0%
TTACCTGGGTTTGAAGATAT+TGG + chr8_3:58530931-58530950 None:intergenic 35.0%
AGAAGAGGCAAAAACATTAC+CGG - chr8_3:58531084-58531103 Msa1297920:CDS 35.0%
! CATTATTGTTTGTTGCAGCT+GGG + chr8_3:58531291-58531310 None:intergenic 35.0%
! ACATTATTGTTTGTTGCAGC+TGG + chr8_3:58531292-58531311 None:intergenic 35.0%
CAAACAATAATGTGCCAAAC+CGG - chr8_3:58531299-58531318 Msa1297920:intron 35.0%
! TGAATCGGCTTATATTGATC+CGG - chr8_3:58531379-58531398 Msa1297920:CDS 35.0%
TTATATTGATCCGGATAGAG+TGG - chr8_3:58531388-58531407 Msa1297920:CDS 35.0%
AATGAATGTACATGACCACA+TGG - chr8_3:58531792-58531811 Msa1297920:five_prime_UTR 35.0%
AGGTAAGGTAGAATAAGAAG+AGG - chr8_3:58529998-58530017 Msa1297920:three_prime_UTR 35.0%
TCTCTTCTCTCTATTGTTGA+GGG + chr8_3:58530177-58530196 None:intergenic 35.0%
TTCTCTTCTCTCTATTGTTG+AGG + chr8_3:58530178-58530197 None:intergenic 35.0%
AGAGAGAAGAGAAGAATAAC+AGG - chr8_3:58530185-58530204 Msa1297920:three_prime_UTR 35.0%
! TCTTTTCCTAACAGCAGAAA+TGG - chr8_3:58530376-58530395 Msa1297920:CDS 35.0%
GAGAATGATGAGTTTGATCA+AGG + chr8_3:58530462-58530481 None:intergenic 35.0%
CAACAAAATGTTGTCTCTAC+TGG - chr8_3:58530734-58530753 Msa1297920:CDS 35.0%
GATCATCGAATGATAAACGA+AGG + chr8_3:58530760-58530779 None:intergenic 35.0%
! GTTGTTGTTGTTGAGATTGT+TGG + chr8_3:58530820-58530839 None:intergenic 35.0%
CAACAACAACAACAACAACA+AGG - chr8_3:58530827-58530846 Msa1297920:intron 35.0%
TTCTCATCTCTATTACCACA+AGG - chr8_3:58530866-58530885 Msa1297920:intron 35.0%
TTACCTGGGTTTGAAGATAT+TGG + chr8_3:58530931-58530950 None:intergenic 35.0%
AGAAGAGGCAAAAACATTAC+CGG - chr8_3:58531084-58531103 Msa1297920:CDS 35.0%
! CATTATTGTTTGTTGCAGCT+GGG + chr8_3:58531291-58531310 None:intergenic 35.0%
! ACATTATTGTTTGTTGCAGC+TGG + chr8_3:58531292-58531311 None:intergenic 35.0%
CAAACAATAATGTGCCAAAC+CGG - chr8_3:58531299-58531318 Msa1297920:intron 35.0%
! TGAATCGGCTTATATTGATC+CGG - chr8_3:58531379-58531398 Msa1297920:CDS 35.0%
TTATATTGATCCGGATAGAG+TGG - chr8_3:58531388-58531407 Msa1297920:CDS 35.0%
AATGAATGTACATGACCACA+TGG - chr8_3:58531792-58531811 Msa1297920:five_prime_UTR 35.0%
GTGTAAGTGTGTGTAAGGTA+AGG - chr8_3:58529983-58530002 Msa1297920:three_prime_UTR 40.0%
TTCTCTCTATTGTTGAGGGA+GGG + chr8_3:58530173-58530192 None:intergenic 40.0%
TCTTGTCCATTTCTGCTGTT+AGG + chr8_3:58530385-58530404 None:intergenic 40.0%
AACAGCAGAAATGGACAAGA+AGG - chr8_3:58530385-58530404 Msa1297920:CDS 40.0%
ACAGCAGAAATGGACAAGAA+GGG - chr8_3:58530386-58530405 Msa1297920:CDS 40.0%
TCCTTACAACAACAACCATC+AGG - chr8_3:58530418-58530437 Msa1297920:CDS 40.0%
! TCCTGATGGTTGTTGTTGTA+AGG + chr8_3:58530422-58530441 None:intergenic 40.0%
AGACCAATATCTTCAAACCC+AGG - chr8_3:58530925-58530944 Msa1297920:CDS 40.0%
TTCAGGGAGAAAATCTACGT+CGG - chr8_3:58531051-58531070 Msa1297920:CDS 40.0%
AGAAAATCTACGTCGGACAT+TGG - chr8_3:58531058-58531077 Msa1297920:CDS 40.0%
GAAGAGGCAAAAACATTACC+GGG - chr8_3:58531085-58531104 Msa1297920:CDS 40.0%
CCACTTCTTTCTCTCTTAAC+CGG + chr8_3:58531145-58531164 None:intergenic 40.0%
TAAAGCAAACAGGGCAAACT+CGG + chr8_3:58531526-58531545 None:intergenic 40.0%
TCTTGGGAGTAAAGCAAACA+GGG + chr8_3:58531535-58531554 None:intergenic 40.0%
TTCTTGGGAGTAAAGCAAAC+AGG + chr8_3:58531536-58531555 None:intergenic 40.0%
ACCTCAACGGTTGAATTCTT+GGG + chr8_3:58531551-58531570 None:intergenic 40.0%
CTAAGAGAGAAAGACCTCAA+CGG + chr8_3:58531564-58531583 None:intergenic 40.0%
ATGACCACATGGTTAACAAG+TGG - chr8_3:58531803-58531822 Msa1297920:five_prime_UTR 40.0%
! AATGCCACTTGTTAACCATG+TGG + chr8_3:58531810-58531829 None:intergenic 40.0%
GTGTAAGTGTGTGTAAGGTA+AGG - chr8_3:58529983-58530002 Msa1297920:three_prime_UTR 40.0%
TTCTCTCTATTGTTGAGGGA+GGG + chr8_3:58530173-58530192 None:intergenic 40.0%
TCTTGTCCATTTCTGCTGTT+AGG + chr8_3:58530385-58530404 None:intergenic 40.0%
AACAGCAGAAATGGACAAGA+AGG - chr8_3:58530385-58530404 Msa1297920:CDS 40.0%
ACAGCAGAAATGGACAAGAA+GGG - chr8_3:58530386-58530405 Msa1297920:CDS 40.0%
TCCTTACAACAACAACCATC+AGG - chr8_3:58530418-58530437 Msa1297920:CDS 40.0%
! TCCTGATGGTTGTTGTTGTA+AGG + chr8_3:58530422-58530441 None:intergenic 40.0%
AGACCAATATCTTCAAACCC+AGG - chr8_3:58530925-58530944 Msa1297920:CDS 40.0%
TTCAGGGAGAAAATCTACGT+CGG - chr8_3:58531051-58531070 Msa1297920:CDS 40.0%
AGAAAATCTACGTCGGACAT+TGG - chr8_3:58531058-58531077 Msa1297920:CDS 40.0%
GAAGAGGCAAAAACATTACC+GGG - chr8_3:58531085-58531104 Msa1297920:CDS 40.0%
CCACTTCTTTCTCTCTTAAC+CGG + chr8_3:58531145-58531164 None:intergenic 40.0%
TAAAGCAAACAGGGCAAACT+CGG + chr8_3:58531526-58531545 None:intergenic 40.0%
TCTTGGGAGTAAAGCAAACA+GGG + chr8_3:58531535-58531554 None:intergenic 40.0%
TTCTTGGGAGTAAAGCAAAC+AGG + chr8_3:58531536-58531555 None:intergenic 40.0%
ACCTCAACGGTTGAATTCTT+GGG + chr8_3:58531551-58531570 None:intergenic 40.0%
CTAAGAGAGAAAGACCTCAA+CGG + chr8_3:58531564-58531583 None:intergenic 40.0%
ATGACCACATGGTTAACAAG+TGG - chr8_3:58531803-58531822 Msa1297920:five_prime_UTR 40.0%
! AATGCCACTTGTTAACCATG+TGG + chr8_3:58531810-58531829 None:intergenic 40.0%
AAGAGAGAGCGAGCAGAATA+AGG - chr8_3:58530065-58530084 Msa1297920:three_prime_UTR 45.0%
! GCAGAATAAGGTGTCTCTCT+TGG - chr8_3:58530077-58530096 Msa1297920:three_prime_UTR 45.0%
CTTCTCTCTATTGTTGAGGG+AGG + chr8_3:58530174-58530193 None:intergenic 45.0%
!! CAACAACCATCAGGAGCATT+AGG - chr8_3:58530427-58530446 Msa1297920:CDS 45.0%
GATAGTCCTAATGCTCCTGA+TGG + chr8_3:58530436-58530455 None:intergenic 45.0%
CTTGCGAGAATTTGTACCTG+CGG + chr8_3:58530609-58530628 None:intergenic 45.0%
GGTACAAATTCTCGCAAGAG+AGG - chr8_3:58530611-58530630 Msa1297920:CDS 45.0%
AAATCTACGTCGGACATTGG+CGG - chr8_3:58531061-58531080 Msa1297920:CDS 45.0%
CCGGTTAAGAGAGAAAGAAG+TGG - chr8_3:58531142-58531161 Msa1297920:CDS 45.0%
TTGGGCTTCCATGGTTAACT+GGG + chr8_3:58531216-58531235 None:intergenic 45.0%
TAACCATGGAAGCCCAAGTT+TGG - chr8_3:58531219-58531238 Msa1297920:CDS 45.0%
TATTGATCCGGATAGAGTGG+TGG - chr8_3:58531391-58531410 Msa1297920:CDS 45.0%
!! CGGTGGTTGTTTTACCTTGT+CGG - chr8_3:58531465-58531484 Msa1297920:intron 45.0%
CAAACACACAAATGCCGACA+AGG + chr8_3:58531482-58531501 None:intergenic 45.0%
TCCCAAGAATTCAACCGTTG+AGG - chr8_3:58531547-58531566 Msa1297920:intron 45.0%
GACCTCAACGGTTGAATTCT+TGG + chr8_3:58531552-58531571 None:intergenic 45.0%
AAGAGAGAGCGAGCAGAATA+AGG - chr8_3:58530065-58530084 Msa1297920:three_prime_UTR 45.0%
! GCAGAATAAGGTGTCTCTCT+TGG - chr8_3:58530077-58530096 Msa1297920:three_prime_UTR 45.0%
CTTCTCTCTATTGTTGAGGG+AGG + chr8_3:58530174-58530193 None:intergenic 45.0%
!! CAACAACCATCAGGAGCATT+AGG - chr8_3:58530427-58530446 Msa1297920:CDS 45.0%
GATAGTCCTAATGCTCCTGA+TGG + chr8_3:58530436-58530455 None:intergenic 45.0%
CTTGCGAGAATTTGTACCTG+CGG + chr8_3:58530609-58530628 None:intergenic 45.0%
GGTACAAATTCTCGCAAGAG+AGG - chr8_3:58530611-58530630 Msa1297920:CDS 45.0%
AAATCTACGTCGGACATTGG+CGG - chr8_3:58531061-58531080 Msa1297920:CDS 45.0%
CCGGTTAAGAGAGAAAGAAG+TGG - chr8_3:58531142-58531161 Msa1297920:CDS 45.0%
TTGGGCTTCCATGGTTAACT+GGG + chr8_3:58531216-58531235 None:intergenic 45.0%
TAACCATGGAAGCCCAAGTT+TGG - chr8_3:58531219-58531238 Msa1297920:CDS 45.0%
TATTGATCCGGATAGAGTGG+TGG - chr8_3:58531391-58531410 Msa1297920:CDS 45.0%
!! CGGTGGTTGTTTTACCTTGT+CGG - chr8_3:58531465-58531484 Msa1297920:intron 45.0%
CAAACACACAAATGCCGACA+AGG + chr8_3:58531482-58531501 None:intergenic 45.0%
TCCCAAGAATTCAACCGTTG+AGG - chr8_3:58531547-58531566 Msa1297920:intron 45.0%
GACCTCAACGGTTGAATTCT+TGG + chr8_3:58531552-58531571 None:intergenic 45.0%
!! TTTATTCTATTTATTTAATT+TGG - chr8_3:58531840-58531859 Msa1297920:five_prime_UTR 5.0%
!! TTTATTCTATTTATTTAATT+TGG - chr8_3:58531840-58531859 Msa1297920:five_prime_UTR 5.0%
CTCTATTGTTGAGGGAGGGA+GGG + chr8_3:58530169-58530188 None:intergenic 50.0%
TCTCTATTGTTGAGGGAGGG+AGG + chr8_3:58530170-58530189 None:intergenic 50.0%
ATGTCTCAACAACTCACCGC+AGG - chr8_3:58530590-58530609 Msa1297920:CDS 50.0%
TCTCGCAAGAGAGGAAGAGA+AGG - chr8_3:58530620-58530639 Msa1297920:CDS 50.0%
TTACCGGGAGCTACTAAACG+CGG - chr8_3:58531100-58531119 Msa1297920:CDS 50.0%
AATTCGCAAAAGCCACACGC+AGG - chr8_3:58531165-58531184 Msa1297920:CDS 50.0%
CTTGGGCTTCCATGGTTAAC+TGG + chr8_3:58531217-58531236 None:intergenic 50.0%
! GGCTTTTGCCTGCCAAACTT+GGG + chr8_3:58531234-58531253 None:intergenic 50.0%
AAGTTTGGCAGGCAAAAGCC+CGG - chr8_3:58531234-58531253 Msa1297920:intron 50.0%
ACAGGCTGAGGATGCTGAAT+CGG - chr8_3:58531364-58531383 Msa1297920:CDS 50.0%
GCAACTTCCACCACTCTATC+CGG + chr8_3:58531401-58531420 None:intergenic 50.0%
! GGATAGAGTGGTGGAAGTTG+CGG - chr8_3:58531400-58531419 Msa1297920:CDS 50.0%
CTCTATTGTTGAGGGAGGGA+GGG + chr8_3:58530169-58530188 None:intergenic 50.0%
TCTCTATTGTTGAGGGAGGG+AGG + chr8_3:58530170-58530189 None:intergenic 50.0%
ATGTCTCAACAACTCACCGC+AGG - chr8_3:58530590-58530609 Msa1297920:CDS 50.0%
TCTCGCAAGAGAGGAAGAGA+AGG - chr8_3:58530620-58530639 Msa1297920:CDS 50.0%
TTACCGGGAGCTACTAAACG+CGG - chr8_3:58531100-58531119 Msa1297920:CDS 50.0%
AATTCGCAAAAGCCACACGC+AGG - chr8_3:58531165-58531184 Msa1297920:CDS 50.0%
CTTGGGCTTCCATGGTTAAC+TGG + chr8_3:58531217-58531236 None:intergenic 50.0%
! GGCTTTTGCCTGCCAAACTT+GGG + chr8_3:58531234-58531253 None:intergenic 50.0%
AAGTTTGGCAGGCAAAAGCC+CGG - chr8_3:58531234-58531253 Msa1297920:intron 50.0%
ACAGGCTGAGGATGCTGAAT+CGG - chr8_3:58531364-58531383 Msa1297920:CDS 50.0%
GCAACTTCCACCACTCTATC+CGG + chr8_3:58531401-58531420 None:intergenic 50.0%
! GGATAGAGTGGTGGAAGTTG+CGG - chr8_3:58531400-58531419 Msa1297920:CDS 50.0%
ATTGTTGAGGGAGGGAGGGA+GGG + chr8_3:58530165-58530184 None:intergenic 55.0%
TATTGTTGAGGGAGGGAGGG+AGG + chr8_3:58530166-58530185 None:intergenic 55.0%
AAAAGCCACACGCAGGAACG+CGG - chr8_3:58531172-58531191 Msa1297920:CDS 55.0%
CATGGTTAACTGGGCCGTAC+GGG + chr8_3:58531207-58531226 None:intergenic 55.0%
CCATGGTTAACTGGGCCGTA+CGG + chr8_3:58531208-58531227 None:intergenic 55.0%
CTGCCAAACTTGGGCTTCCA+TGG + chr8_3:58531225-58531244 None:intergenic 55.0%
CATGGAAGCCCAAGTTTGGC+AGG - chr8_3:58531223-58531242 Msa1297920:CDS 55.0%
! GGGCTTTTGCCTGCCAAACT+TGG + chr8_3:58531235-58531254 None:intergenic 55.0%
AGTTTGGCAGGCAAAAGCCC+GGG - chr8_3:58531235-58531254 Msa1297920:intron 55.0%
AGAAGCTGCTGCGGCTTCTT+GGG + chr8_3:58531261-58531280 None:intergenic 55.0%
TTCATGCGGCATGGAAGGAC+AGG - chr8_3:58531346-58531365 Msa1297920:intron 55.0%
! TAGAGTGGTGGAAGTTGCGG+CGG - chr8_3:58531403-58531422 Msa1297920:CDS 55.0%
! TAGAGGGTGTGAAAAGCGCG+TGG - chr8_3:58531439-58531458 Msa1297920:CDS 55.0%
! GTGTGAAAAGCGCGTGGCAA+CGG - chr8_3:58531445-58531464 Msa1297920:CDS 55.0%
ATTGTTGAGGGAGGGAGGGA+GGG + chr8_3:58530165-58530184 None:intergenic 55.0%
TATTGTTGAGGGAGGGAGGG+AGG + chr8_3:58530166-58530185 None:intergenic 55.0%
AAAAGCCACACGCAGGAACG+CGG - chr8_3:58531172-58531191 Msa1297920:CDS 55.0%
CATGGTTAACTGGGCCGTAC+GGG + chr8_3:58531207-58531226 None:intergenic 55.0%
CCATGGTTAACTGGGCCGTA+CGG + chr8_3:58531208-58531227 None:intergenic 55.0%
CTGCCAAACTTGGGCTTCCA+TGG + chr8_3:58531225-58531244 None:intergenic 55.0%
CATGGAAGCCCAAGTTTGGC+AGG - chr8_3:58531223-58531242 Msa1297920:CDS 55.0%
! GGGCTTTTGCCTGCCAAACT+TGG + chr8_3:58531235-58531254 None:intergenic 55.0%
AGTTTGGCAGGCAAAAGCCC+GGG - chr8_3:58531235-58531254 Msa1297920:intron 55.0%
AGAAGCTGCTGCGGCTTCTT+GGG + chr8_3:58531261-58531280 None:intergenic 55.0%
TTCATGCGGCATGGAAGGAC+AGG - chr8_3:58531346-58531365 Msa1297920:intron 55.0%
! TAGAGTGGTGGAAGTTGCGG+CGG - chr8_3:58531403-58531422 Msa1297920:CDS 55.0%
! TAGAGGGTGTGAAAAGCGCG+TGG - chr8_3:58531439-58531458 Msa1297920:CDS 55.0%
! GTGTGAAAAGCGCGTGGCAA+CGG - chr8_3:58531445-58531464 Msa1297920:CDS 55.0%
GTCGGACATTGGCGGAGAAG+AGG - chr8_3:58531069-58531088 Msa1297920:CDS 60.0%
ACTAAACGCGGCGGAGGAAG+CGG - chr8_3:58531112-58531131 Msa1297920:CDS 60.0%
TAACTCCGCGTTCCTGCGTG+TGG + chr8_3:58531180-58531199 None:intergenic 60.0%
CGCGGAGTTAGAAGCCCGTA+CGG - chr8_3:58531190-58531209 Msa1297920:CDS 60.0%
CCGTACGGCCCAGTTAACCA+TGG - chr8_3:58531205-58531224 Msa1297920:CDS 60.0%
GAGAAGCTGCTGCGGCTTCT+TGG + chr8_3:58531262-58531281 None:intergenic 60.0%
GGCTTGCAGAGAAGCTGCTG+CGG + chr8_3:58531270-58531289 None:intergenic 60.0%
TGCCAAACCGGCGAAGATGC+TGG - chr8_3:58531311-58531330 Msa1297920:intron 60.0%
GGCGTTTCATGCGGCATGGA+AGG - chr8_3:58531341-58531360 Msa1297920:intron 60.0%
CGGCGCGTGGGAAATGTAGA+GGG - chr8_3:58531423-58531442 Msa1297920:CDS 60.0%
! TGAAAAGCGCGTGGCAACGG+TGG - chr8_3:58531448-58531467 Msa1297920:CDS 60.0%
GTCGGACATTGGCGGAGAAG+AGG - chr8_3:58531069-58531088 Msa1297920:CDS 60.0%
ACTAAACGCGGCGGAGGAAG+CGG - chr8_3:58531112-58531131 Msa1297920:CDS 60.0%
TAACTCCGCGTTCCTGCGTG+TGG + chr8_3:58531180-58531199 None:intergenic 60.0%
CGCGGAGTTAGAAGCCCGTA+CGG - chr8_3:58531190-58531209 Msa1297920:CDS 60.0%
CCGTACGGCCCAGTTAACCA+TGG - chr8_3:58531205-58531224 Msa1297920:CDS 60.0%
GAGAAGCTGCTGCGGCTTCT+TGG + chr8_3:58531262-58531281 None:intergenic 60.0%
GGCTTGCAGAGAAGCTGCTG+CGG + chr8_3:58531270-58531289 None:intergenic 60.0%
TGCCAAACCGGCGAAGATGC+TGG - chr8_3:58531311-58531330 Msa1297920:intron 60.0%
GGCGTTTCATGCGGCATGGA+AGG - chr8_3:58531341-58531360 Msa1297920:intron 60.0%
CGGCGCGTGGGAAATGTAGA+GGG - chr8_3:58531423-58531442 Msa1297920:CDS 60.0%
! TGAAAAGCGCGTGGCAACGG+TGG - chr8_3:58531448-58531467 Msa1297920:CDS 60.0%
TTGAGGGAGGGAGGGAGGGA+GGG + chr8_3:58530161-58530180 None:intergenic 65.0%
CCGCCGCGTTTAGTAGCTCC+CGG + chr8_3:58531106-58531125 None:intergenic 65.0%
CCGGGAGCTACTAAACGCGG+CGG - chr8_3:58531103-58531122 Msa1297920:CDS 65.0%
GGAGCTACTAAACGCGGCGG+AGG - chr8_3:58531106-58531125 Msa1297920:CDS 65.0%
! CGCCAGCATCTTCGCCGGTT+TGG + chr8_3:58531316-58531335 None:intergenic 65.0%
CATGCCGCATGAAACGCCGC+CGG + chr8_3:58531339-58531358 None:intergenic 65.0%
CGGCATGGAAGGACAGGCTG+AGG - chr8_3:58531352-58531371 Msa1297920:CDS 65.0%
GCGGCGCGTGGGAAATGTAG+AGG - chr8_3:58531422-58531441 Msa1297920:CDS 65.0%
TTGAGGGAGGGAGGGAGGGA+GGG + chr8_3:58530161-58530180 None:intergenic 65.0%
CCGCCGCGTTTAGTAGCTCC+CGG + chr8_3:58531106-58531125 None:intergenic 65.0%
CCGGGAGCTACTAAACGCGG+CGG - chr8_3:58531103-58531122 Msa1297920:CDS 65.0%
GGAGCTACTAAACGCGGCGG+AGG - chr8_3:58531106-58531125 Msa1297920:CDS 65.0%
! CGCCAGCATCTTCGCCGGTT+TGG + chr8_3:58531316-58531335 None:intergenic 65.0%
CATGCCGCATGAAACGCCGC+CGG + chr8_3:58531339-58531358 None:intergenic 65.0%
CGGCATGGAAGGACAGGCTG+AGG - chr8_3:58531352-58531371 Msa1297920:CDS 65.0%
GCGGCGCGTGGGAAATGTAG+AGG - chr8_3:58531422-58531441 Msa1297920:CDS 65.0%
GTTGAGGGAGGGAGGGAGGG+AGG + chr8_3:58530162-58530181 None:intergenic 70.0%
AAACGCGGCGGAGGAAGCGG+TGG - chr8_3:58531115-58531134 Msa1297920:CDS 70.0%
TGCTGCGGCTTCTTGGGCCC+GGG + chr8_3:58531255-58531274 None:intergenic 70.0%
CTGCTGCGGCTTCTTGGGCC+CGG + chr8_3:58531256-58531275 None:intergenic 70.0%
ACCGGCGAAGATGCTGGCGC+CGG - chr8_3:58531317-58531336 Msa1297920:intron 70.0%
CGGCGGCGTTTCATGCGGCA+TGG - chr8_3:58531337-58531356 Msa1297920:intron 70.0%
TGGAAGTTGCGGCGGCGCGT+GGG - chr8_3:58531411-58531430 Msa1297920:CDS 70.0%
GTTGAGGGAGGGAGGGAGGG+AGG + chr8_3:58530162-58530181 None:intergenic 70.0%
AAACGCGGCGGAGGAAGCGG+TGG - chr8_3:58531115-58531134 Msa1297920:CDS 70.0%
TGCTGCGGCTTCTTGGGCCC+GGG + chr8_3:58531255-58531274 None:intergenic 70.0%
CTGCTGCGGCTTCTTGGGCC+CGG + chr8_3:58531256-58531275 None:intergenic 70.0%
ACCGGCGAAGATGCTGGCGC+CGG - chr8_3:58531317-58531336 Msa1297920:intron 70.0%
CGGCGGCGTTTCATGCGGCA+TGG - chr8_3:58531337-58531356 Msa1297920:intron 70.0%
TGGAAGTTGCGGCGGCGCGT+GGG - chr8_3:58531411-58531430 Msa1297920:CDS 70.0%
CGGAGGAAGCGGTGGCGCAC+CGG - chr8_3:58531123-58531142 Msa1297920:CDS 75.0%
GCCGGCGCCAGCATCTTCGC+CGG + chr8_3:58531321-58531340 None:intergenic 75.0%
! GGCGAAGATGCTGGCGCCGG+CGG - chr8_3:58531320-58531339 Msa1297920:intron 75.0%
!! GGCGCCGGCGGCGTTTCATG+CGG - chr8_3:58531332-58531351 Msa1297920:intron 75.0%
GTGGAAGTTGCGGCGGCGCG+TGG - chr8_3:58531410-58531429 Msa1297920:CDS 75.0%
CGGAGGAAGCGGTGGCGCAC+CGG - chr8_3:58531123-58531142 Msa1297920:CDS 75.0%
GCCGGCGCCAGCATCTTCGC+CGG + chr8_3:58531321-58531340 None:intergenic 75.0%
! GGCGAAGATGCTGGCGCCGG+CGG - chr8_3:58531320-58531339 Msa1297920:intron 75.0%
!! GGCGCCGGCGGCGTTTCATG+CGG - chr8_3:58531332-58531351 Msa1297920:intron 75.0%
GTGGAAGTTGCGGCGGCGCG+TGG - chr8_3:58531410-58531429 Msa1297920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58529982 58531876 58529982 ID=Msa1297920;Name=Msa1297920
chr8_3 mRNA 58529982 58531876 58529982 ID=Msa1297920-mRNA-1;Parent=Msa1297920;Name=Msa1297920-mRNA-1;_AED=0.07;_eAED=0.07;_QI=229|1|1|1|1|1|4|293|348
chr8_3 exon 58529982 58530802 58529982 ID=Msa1297920-mRNA-1:exon:16801;Parent=Msa1297920-mRNA-1
chr8_3 exon 58530912 58531246 58530912 ID=Msa1297920-mRNA-1:exon:16800;Parent=Msa1297920-mRNA-1
chr8_3 exon 58531347 58531468 58531347 ID=Msa1297920-mRNA-1:exon:16799;Parent=Msa1297920-mRNA-1
chr8_3 exon 58531586 58531876 58531586 ID=Msa1297920-mRNA-1:exon:16798;Parent=Msa1297920-mRNA-1
chr8_3 five_prime_UTR 58531648 58531876 58531648 ID=Msa1297920-mRNA-1:five_prime_utr;Parent=Msa1297920-mRNA-1
chr8_3 CDS 58531586 58531647 58531586 ID=Msa1297920-mRNA-1:cds;Parent=Msa1297920-mRNA-1
chr8_3 CDS 58531347 58531468 58531347 ID=Msa1297920-mRNA-1:cds;Parent=Msa1297920-mRNA-1
chr8_3 CDS 58530912 58531246 58530912 ID=Msa1297920-mRNA-1:cds;Parent=Msa1297920-mRNA-1
chr8_3 CDS 58530275 58530802 58530275 ID=Msa1297920-mRNA-1:cds;Parent=Msa1297920-mRNA-1
chr8_3 three_prime_UTR 58529982 58530274 58529982 ID=Msa1297920-mRNA-1:three_prime_utr;Parent=Msa1297920-mRNA-1
Gene Sequence

>Msa1297920

ATGTCTGTTCAAGCTCAATATCCATCAAATATTCTTCTTCTAAACAACAACAACAATAACAGCAGAAATGGACAAGAAGGGCATGAATTCTCCTTACAACAACAACCATCAGGAGCATTAGGACTATCACTCCTTGATCAAACTCATCATTCTCATAATATCCTATGCAACAATAACAACACAAGTACAAATTCTCGCAAGAGAGGAAGAGAAGGAACATCCCCTAACGTTATTAATCATTTCTCTTTACAACCTCAACCTTCTCAAATTATTCATCTTTCTCAACTCCATAATCATCATCATCAACAACAAAATGTTGTCTCTACTGGCCTTCGTTTATCATTCGATGATCAACAACAACAAAGATTACAATTACAACTTCATCAACACCAACAATCTCAACAACAACAACAACAACAAGGTTGTCACTCTTCATCTTTCTCATCTCTATTACCACAAGGAATTGTTTCTCAAATCAAACAACAACACGATGAATTAGACCAATATCTTCAAACCCAGGGAGAAAATCTACGTCGGACATTGGCGGAGAAGAGGCAAAAACATTACCGGGAGCTACTAAACGCGGCGGAGGAAGCGGTGGCGCACCGGTTAAGAGAGAAAGAAGTGGAATTCGCAAAAGCCACACGCAGGAACGCGGAGTTAGAAGCCCGTACGGCCCAGTTAACCATGGAAGCCCAAGTTTGGCAGGCAAAAGCCCGGGCCCAAGAAGCCGCAGCAGCTTCTCTGCAAGCCCAGCTGCAACAAACAATAATGTGCCAAACCGGCGAAGATGCTGGCGCCGGCGGCGTTTCATGCGGCATGGAAGGACAGGCTGAGGATGCTGAATCGGCTTATATTGATCCGGATAGAGTGGTGGAAGTTGCGGCGGCGCGTGGGAAATGTAGAGGGTGTGAAAAGCGCGTGGCAACGGTGGTTGTTTTACCTTGTCGGCATTTGTGTGTTTGTACAGAATGCGATGCGCATTTCCGAGTTTGCCCTGTTTGCTTTACTCCCAAGAATTCAACCGTTGAGGTCTTTCTCTCTTAG
Protein sequence

>Msa1297920

MSVQAQYPSNILLLNNNNNNSRNGQEGHEFSLQQQPSGALGLSLLDQTHHSHNILCNNNNTSTNSRKRGREGTSPNVINHFSLQPQPSQIIHLSQLHNHHHQQQNVVSTGLRLSFDDQQQQRLQLQLHQHQQSQQQQQQQGCHSSSFSSLLPQGIVSQIKQQHDELDQYLQTQGENLRRTLAEKRQKHYRELLNAAEEAVAHRLREKEVEFAKATRRNAELEARTAQLTMEAQVWQAKARAQEAAAASLQAQLQQTIMCQTGEDAGAGGVSCGMEGQAEDAESAYIDPDRVVEVAAARGKCRGCEKRVATVVVLPCRHLCVCTECDAHFRVCPVCFTPKNSTVEVFLS*