Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012770 | Msa0152640 | 0.870662 | 1.232037e-66 | -8.615850e-47 |
| Msa0012780 | Msa0152640 | 0.938085 | 1.203474e-98 | -8.615850e-47 |
| Msa0012790 | Msa0152640 | 0.971466 | 3.304628e-133 | -8.615850e-47 |
| Msa0012810 | Msa0152640 | 0.883379 | 4.715126e-71 | -8.615850e-47 |
| Msa0012820 | Msa0152640 | 0.858534 | 7.712486e-63 | -8.615850e-47 |
| Msa0043120 | Msa0152640 | 0.825697 | 4.068720e-54 | -8.615850e-47 |
| Msa0043150 | Msa0152640 | 0.804360 | 2.242828e-49 | -8.615850e-47 |
| Msa0048950 | Msa0152640 | 0.804833 | 1.786872e-49 | -8.615850e-47 |
| Msa0053960 | Msa0152640 | -0.813840 | 2.087417e-51 | -8.615850e-47 |
| Msa0059880 | Msa0152640 | 0.814143 | 1.790018e-51 | -8.615850e-47 |
| Msa0061590 | Msa0152640 | 0.945220 | 4.588074e-104 | -8.615850e-47 |
| Msa0061600 | Msa0152640 | 0.851356 | 9.359257e-61 | -8.615850e-47 |
| Msa0072030 | Msa0152640 | 0.801625 | 8.242071e-49 | -8.615850e-47 |
| Msa0076650 | Msa0152640 | 0.804428 | 2.170818e-49 | -8.615850e-47 |
| Msa0106110 | Msa0152640 | 0.939765 | 7.322534e-100 | -8.615850e-47 |
| Msa0106120 | Msa0152640 | 0.848938 | 4.453064e-60 | -8.615850e-47 |
| Msa0106130 | Msa0152640 | 0.838211 | 3.289621e-57 | -8.615850e-47 |
| Msa0131460 | Msa0152640 | 0.804675 | 1.927454e-49 | -8.615850e-47 |
| Msa0143280 | Msa0152640 | -0.839263 | 1.759179e-57 | -8.615850e-47 |
| Msa0150910 | Msa0152640 | 0.803353 | 3.629583e-49 | -8.615850e-47 |
| Msa0152640 | Msa0152650 | 0.944429 | 1.982180e-103 | -8.615850e-47 |
| Msa0152640 | Msa0152660 | 0.979093 | 3.228131e-147 | -8.615850e-47 |
| Msa0152640 | Msa0152740 | 0.860214 | 2.414023e-63 | -8.615850e-47 |
| Msa0152640 | Msa0214830 | 0.831657 | 1.474100e-55 | -8.615850e-47 |
| Msa0152640 | Msa0226410 | 0.856780 | 2.552582e-62 | -8.615850e-47 |
| Msa0152640 | Msa0240990 | 0.800434 | 1.443896e-48 | -8.615850e-47 |
| Msa0152640 | Msa0264940 | 0.844342 | 8.020584e-59 | -8.615850e-47 |
| Msa0152640 | Msa0270840 | -0.816785 | 4.623111e-52 | -8.615850e-47 |
| Msa0152640 | Msa0294220 | 0.805418 | 1.348037e-49 | -8.615850e-47 |
| Msa0152640 | Msa0295980 | 0.801245 | 9.861239e-49 | -8.615850e-47 |
| Msa0152640 | Msa0302990 | 0.841588 | 4.338363e-58 | -8.615850e-47 |
| Msa0152640 | Msa0304550 | 0.834308 | 3.231864e-56 | -8.615850e-47 |
| Msa0152640 | Msa0333940 | 0.803003 | 4.289660e-49 | -8.615850e-47 |
| Msa0152640 | Msa0334050 | 0.819712 | 1.005496e-52 | -8.615850e-47 |
| Msa0152640 | Msa0341110 | 0.838833 | 2.273768e-57 | -8.615850e-47 |
| Msa0152640 | Msa0353040 | 0.803057 | 4.179286e-49 | -8.615850e-47 |
| Msa0152640 | Msa0405250 | 0.804016 | 2.644603e-49 | -8.615850e-47 |
| Msa0152640 | Msa0471210 | 0.802696 | 4.963299e-49 | -8.615850e-47 |
| Msa0152640 | Msa0529360 | 0.843004 | 1.829392e-58 | -8.615850e-47 |
| Msa0152640 | Msa0556080 | -0.805767 | 1.138926e-49 | -8.615850e-47 |
| Msa0152640 | Msa0566930 | 0.809357 | 1.969002e-50 | -8.615850e-47 |
| Msa0152640 | Msa0618490 | -0.840184 | 1.013092e-57 | -8.615850e-47 |
| Msa0152640 | Msa0624930 | 0.832553 | 8.854003e-56 | -8.615850e-47 |
| Msa0152640 | Msa0625440 | -0.802676 | 5.011048e-49 | -8.615850e-47 |
| Msa0152640 | Msa0627050 | -0.800483 | 1.410871e-48 | -8.615850e-47 |
| Msa0152640 | Msa0633720 | -0.838875 | 2.217052e-57 | -8.615850e-47 |
| Msa0152640 | Msa0651410 | -0.801171 | 1.021259e-48 | -8.615850e-47 |
| Msa0152640 | Msa0671400 | 0.815718 | 8.010222e-52 | -8.615850e-47 |
| Msa0152640 | Msa0675010 | -0.803279 | 3.761441e-49 | -8.615850e-47 |
| Msa0152640 | Msa0678620 | 0.825479 | 4.583215e-54 | -8.615850e-47 |
| Msa0152640 | Msa0682200 | -0.802336 | 5.888769e-49 | -8.615850e-47 |
| Msa0152640 | Msa0707040 | -0.806136 | 9.525735e-50 | -8.615850e-47 |
| Msa0152640 | Msa0733140 | 0.802370 | 5.794568e-49 | -8.615850e-47 |
| Msa0152640 | Msa0749150 | -0.808961 | 2.393876e-50 | -8.615850e-47 |
| Msa0152640 | Msa0777500 | 0.811947 | 5.426277e-51 | -8.615850e-47 |
| Msa0152640 | Msa0792880 | -0.805749 | 1.148680e-49 | -8.615850e-47 |
| Msa0152640 | Msa0814160 | 0.804147 | 2.483928e-49 | -8.615850e-47 |
| Msa0152640 | Msa0828900 | -0.811389 | 7.175408e-51 | -8.615850e-47 |
| Msa0152640 | Msa0855090 | 0.810137 | 1.338613e-50 | -8.615850e-47 |
| Msa0152640 | Msa0882880 | 0.833929 | 4.020115e-56 | -8.615850e-47 |
| Msa0152640 | Msa0883640 | 0.804620 | 1.979573e-49 | -8.615850e-47 |
| Msa0152640 | Msa0910250 | 0.851150 | 1.070295e-60 | -8.615850e-47 |
| Msa0152640 | Msa0910830 | 0.814916 | 1.207538e-51 | -8.615850e-47 |
| Msa0152640 | Msa0911910 | -0.812540 | 4.028043e-51 | -8.615850e-47 |
| Msa0152640 | Msa0948050 | 0.829457 | 5.092590e-55 | -8.615850e-47 |
| Msa0152640 | Msa0960090 | 0.806689 | 7.282974e-50 | -8.615850e-47 |
| Msa0152640 | Msa0984460 | 0.827453 | 1.551420e-54 | -8.615850e-47 |
| Msa0152640 | Msa0985700 | 0.804060 | 2.589211e-49 | -8.615850e-47 |
| Msa0152640 | Msa1009170 | -0.800516 | 1.389152e-48 | -8.615850e-47 |
| Msa0152640 | Msa1024350 | 0.802676 | 5.009531e-49 | -8.615850e-47 |
| Msa0152640 | Msa1076830 | 0.800625 | 1.320214e-48 | -8.615850e-47 |
| Msa0152640 | Msa1109880 | 0.803863 | 2.845544e-49 | -8.615850e-47 |
| Msa0152640 | Msa1109890 | 0.801680 | 8.032425e-49 | -8.615850e-47 |
| Msa0152640 | Msa1125450 | -0.841455 | 4.704378e-58 | -8.615850e-47 |
| Msa0152640 | Msa1133530 | -0.808637 | 2.808658e-50 | -8.615850e-47 |
| Msa0152640 | Msa1164570 | -0.841339 | 5.046685e-58 | -8.615850e-47 |
| Msa0152640 | Msa1182800 | -0.817166 | 3.797000e-52 | -8.615850e-47 |
| Msa0152640 | Msa1199750 | -0.804755 | 1.855353e-49 | -8.615850e-47 |
| Msa0152640 | Msa1205330 | 0.809549 | 1.791447e-50 | -8.615850e-47 |
| Msa0152640 | Msa1281130 | 0.801877 | 7.319221e-49 | -8.615850e-47 |
| Msa0152640 | Msa1297920 | 0.805300 | 1.426587e-49 | -8.615850e-47 |
| Msa0152640 | Msa1320330 | 0.804001 | 2.664073e-49 | -8.615850e-47 |
| Msa0152640 | Msa1328600 | -0.824934 | 6.167367e-54 | -8.615850e-47 |
| Msa0152640 | Msa1348500 | -0.802278 | 6.052756e-49 | -8.615850e-47 |
| Msa0152640 | Msa1357860 | 0.801812 | 7.546581e-49 | -8.615850e-47 |
| Msa0152640 | Msa1386250 | -0.845055 | 5.154083e-59 | -8.615850e-47 |
| Msa0152640 | Msa1407670 | 0.827064 | 1.922679e-54 | -8.615850e-47 |
| Msa0152640 | Msa1449770 | 0.830685 | 2.555394e-55 | -8.615850e-47 |
| Msa0152640 | Msa1451660 | 0.808940 | 2.418819e-50 | -8.615850e-47 |
| Msa0152640 | Msa1460310 | 0.841710 | 4.028169e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 111 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGGGATGGTGAGGGTGG+TGG | 0.192067 | 1_4:-15550280 | Msa0152640:CDS |
| GGTGGATCCTTGTGTATATA+TGG | 0.235774 | 1_4:-15550307 | Msa0152640:CDS |
| GGGGAAGGTGAGGGTGGTGG+TGG | 0.271395 | 1_4:-15550085 | Msa0152640:CDS |
| GGGGAAGGTGAGGGTGGTGG+TGG | 0.284235 | 1_4:-15550037 | Msa0152640:CDS |
| GGGGATGGTGAGGGTGGTGG+GGG | 0.295085 | 1_4:-15550277 | Msa0152640:CDS |
| GAGGGGATGGTGAGGGTGGT+GGG | 0.295383 | 1_4:-15550279 | Msa0152640:CDS |
| GGTGGGGAAGGTGAGGGTGG+TGG | 0.306460 | 1_4:-15550040 | Msa0152640:CDS |
| GGTGGGGAAGGTGAGGGTGG+TGG | 0.306460 | 1_4:-15550088 | Msa0152640:CDS |
| AGGGGATGGTGAGGGTGGTG+GGG | 0.310725 | 1_4:-15550278 | Msa0152640:CDS |
| GGAGATGGTGAAGGTGGTGG+TGG | 0.320320 | 1_4:-15550346 | Msa0152640:CDS |
| GGTGGAGGGGATGGTGAGGG+TGG | 0.321037 | 1_4:-15550283 | Msa0152640:CDS |
| GGAGGAGAGTTGTAATAGTA+TGG | 0.323288 | 1_4:-15550756 | Msa0152640:CDS |
| GGTGGTGGGGAAGGTGAGGG+TGG | 0.327401 | 1_4:-15550043 | Msa0152640:CDS |
| GGTGATGGAGATGGTGGTGG+TGG | 0.327891 | 1_4:-15550229 | Msa0152640:CDS |
| GGTGAAGGAGTTGGTGGTGG+TGG | 0.352365 | 1_4:-15549989 | Msa0152640:CDS |
| TGGAGGTGGTGGGGAAGGTG+AGG | 0.372320 | 1_4:-15550047 | Msa0152640:CDS |
| GGTGGAGGAGATGGTGAAGG+GGG | 0.372665 | 1_4:-15550399 | Msa0152640:CDS |
| GGAGGAAGGACCTTGGGTGG+TGG | 0.385652 | 1_4:-15550732 | Msa0152640:CDS |
| GGAGGAGATGGTGAAGGTGG+TGG | 0.394944 | 1_4:-15550349 | Msa0152640:CDS |
| GGTGGGGATTTGTAATAGTA+TGG | 0.418860 | 1_4:-15550328 | Msa0152640:CDS |
| TGGTGGTAGGGATGTGGGTG+AGG | 0.425459 | 1_4:-15550795 | Msa0152640:CDS |
| GTGGATCCTTGTGTATATAT+GGG | 0.426916 | 1_4:-15550306 | Msa0152640:CDS |
| TGGGGAGACTTGTAGTAGTA+TGG | 0.433147 | 1_4:-15550376 | Msa0152640:CDS |
| GGTGGAGACTTGTAATAGTA+TGG | 0.440365 | 1_4:-15550211 | Msa0152640:CDS |
| TGAGGATATGCAACGGGTGG+AGG | 0.440976 | 1_4:-15550777 | Msa0152640:CDS |
| GGAGGTGACGGTGATGGAGG+AGG | 0.441345 | 1_4:-15549923 | Msa0152640:CDS |
| TAGTAAGGTGGTGGAGGTGA+AGG | 0.443321 | 1_4:-15550148 | Msa0152640:intron |
| GACTCTTGTAGTAGTATGGT+GGG | 0.445360 | 1_4:-15550111 | Msa0152640:CDS |
| GGAGGACTCTTGTAGTAGTA+TGG | 0.446693 | 1_4:-15550115 | Msa0152640:CDS |
| GGTGAAGGAGAAGGTGGTGG+AGG | 0.453158 | 1_4:-15550133 | Msa0152640:CDS |
| GGAGGTGAAGGAGAAGGTGG+TGG | 0.455074 | 1_4:-15550136 | Msa0152640:CDS |
| GGAAGGACCTTGGGTGGTGG+TGG | 0.456847 | 1_4:-15550729 | Msa0152640:CDS |
| GGTGGTGAAGGAGTTGGTGG+TGG | 0.461054 | 1_4:-15549992 | Msa0152640:CDS |
| TTATAGTAGTATGGTGGTGG+AGG | 0.463938 | 1_4:-15550414 | Msa0152640:intron |
| GGTGGTGGTGAAGGAGTTGG+TGG | 0.464276 | 1_4:-15549995 | Msa0152640:CDS |
| GGTGGAGGTGACGGTGATGG+AGG | 0.466117 | 1_4:-15549926 | Msa0152640:CDS |
| TATGGTGGAGGAAGGACCTT+GGG | 0.466179 | 1_4:-15550738 | Msa0152640:CDS |
| GCAGGAGCCTTGTGTTCATA+TGG | 0.466880 | 1_4:-15549950 | Msa0152640:CDS |
| AATGAGTGGTGGTAGGGATG+TGG | 0.470737 | 1_4:-15550801 | Msa0152640:CDS |
| GAGATGGTGAAGGTGGTGGT+GGG | 0.472122 | 1_4:-15550345 | Msa0152640:CDS |
| TAGTATGGTGGTGGAGGGGA+AGG | 0.472216 | 1_4:-15550196 | Msa0152640:intron |
| GTGGTGGAGGAGATGGTGAA+GGG | 0.474012 | 1_4:-15550401 | Msa0152640:CDS |
| GATTTATAGTAGTATGGTGG+TGG | 0.478027 | 1_4:-15550417 | Msa0152640:intron |
| GGTGGAGGAGATGGTGAAGG+TGG | 0.479743 | 1_4:-15550352 | Msa0152640:CDS |
| GGTGGTGGAGGTGACGGTGA+TGG | 0.479808 | 1_4:-15549929 | Msa0152640:CDS |
| TGGTGGAGGAGATGGTGAAG+GGG | 0.480349 | 1_4:-15550400 | Msa0152640:CDS |
| TTGTAGTAGTAAGGTGGTGG+AGG | 0.483502 | 1_4:-15550154 | Msa0152640:intron |
| TTGTAATAGTATGGTGGTGG+AGG | 0.496353 | 1_4:-15550202 | Msa0152640:CDS |
| GAGTTGTAATAGTATGGTGG+AGG | 0.496703 | 1_4:-15550750 | Msa0152640:CDS |
| GGTGACGGTGATGGAGGAGG+TGG | 0.501826 | 1_4:-15549920 | None:intergenic |
| GGTGGTGACTTGTACACATA+TGG | 0.501996 | 1_4:-15550067 | Msa0152640:CDS |
| GACTTGTAGTAATATGGAGG+TGG | 0.503462 | 1_4:-15550253 | Msa0152640:CDS |
| TTGTAGTAGTATGGTGGTGG+AGG | 0.503501 | 1_4:-15550367 | Msa0152640:CDS |
| ATGAGTGGTGGTAGGGATGT+GGG | 0.503562 | 1_4:-15550800 | Msa0152640:CDS |
| ACATATGGAGGTGGTGGGGA+AGG | 0.506597 | 1_4:-15550052 | Msa0152640:CDS |
| AGATGGTGAAGGTGGTGGTG+GGG | 0.510415 | 1_4:-15550344 | Msa0152640:CDS |
| GGTGGTGGAGGAGATGGTGA+AGG | 0.511492 | 1_4:-15550402 | Msa0152640:CDS |
| TGTGGGTGAGGATATGCAAC+GGG | 0.514156 | 1_4:-15550783 | Msa0152640:CDS |
| GGTGGTGGAGGTGAAGGAGA+AGG | 0.517020 | 1_4:-15550142 | Msa0152640:CDS |
| GGATATGCAACGGGTGGAGG+AGG | 0.521099 | 1_4:-15550774 | Msa0152640:CDS |
| GGAGGTGGTGGTGAAGGAGT+TGG | 0.523175 | 1_4:-15549998 | Msa0152640:CDS |
| TGGATCCTTGTGTATATATG+GGG | 0.524777 | 1_4:-15550305 | Msa0152640:CDS |
| GACTTGTAGTAGTATGGTGG+TGG | 0.525053 | 1_4:-15550370 | Msa0152640:CDS |
| GGTGGAGGTGAAGGAGAAGG+TGG | 0.529154 | 1_4:-15550139 | Msa0152640:CDS |
| GGAGGTGGTGGGGAAGGTGA+GGG | 0.532038 | 1_4:-15550046 | Msa0152640:CDS |
| GGAGAGTTGTAATAGTATGG+TGG | 0.533438 | 1_4:-15550753 | Msa0152640:CDS |
| CTCTTGTAGTAGTATGGTGG+GGG | 0.537587 | 1_4:-15550109 | Msa0152640:CDS |
| GGTGGAGACTTGTAGTAGTA+AGG | 0.538214 | 1_4:-15550711 | Msa0152640:intron |
| ACATAAGGAGGTGGTGGTGA+AGG | 0.540565 | 1_4:-15550004 | Msa0152640:CDS |
| TTGTACACATATGGAGGTGG+TGG | 0.541075 | 1_4:-15550058 | Msa0152640:CDS |
| TAGTATGGTGGTGGAGGAGA+TGG | 0.542370 | 1_4:-15550361 | Msa0152640:CDS |
| ACTTGTAGTAATATGGAGGT+GGG | 0.542787 | 1_4:-15550252 | Msa0152640:CDS |
| ACTCTTGTAGTAGTATGGTG+GGG | 0.546800 | 1_4:-15550110 | Msa0152640:CDS |
| TTGTAGTAATATGGAGGTGG+GGG | 0.548364 | 1_4:-15550250 | Msa0152640:CDS |
| GGAGATTTATAGTAGTATGG+TGG | 0.550366 | 1_4:-15550420 | Msa0152640:intron |
| GGACTCTTGTAGTAGTATGG+TGG | 0.554508 | 1_4:-15550112 | Msa0152640:CDS |
| TAGTATGGTGGTGGAGGAGA+TGG | 0.555209 | 1_4:-15550408 | Msa0152640:CDS |
| GGTGGTGGAGGAGATGGTGA+AGG | 0.555801 | 1_4:-15550355 | Msa0152640:CDS |
| CTTGTAGTAATATGGAGGTG+GGG | 0.560250 | 1_4:-15550251 | Msa0152640:CDS |
| TTGTGTTCATATGGTGGTGG+AGG | 0.561271 | 1_4:-15549941 | Msa0152640:CDS |
| GCCTTGTGTTCATATGGTGG+TGG | 0.561937 | 1_4:-15549944 | Msa0152640:CDS |
| GGTGACTTGTACTCATAAGC+AGG | 0.562235 | 1_4:-15549968 | Msa0152640:CDS |
| TGTAATAGTATGGTGGAGGA+AGG | 0.562959 | 1_4:-15550746 | Msa0152640:CDS |
| ACAATCAATGAGTGGTGGTA+GGG | 0.564935 | 1_4:-15550807 | None:intergenic |
| GGGGATTTGTAATAGTATGG+TGG | 0.567950 | 1_4:-15550325 | Msa0152640:CDS |
| GTATGGTGGAGGAAGGACCT+TGG | 0.567981 | 1_4:-15550739 | Msa0152640:CDS |
| GACTTGTAATAGTATGGTGG+TGG | 0.571407 | 1_4:-15550205 | Msa0152640:CDS |
| GGTGGTGACTTGTACACATA+AGG | 0.575153 | 1_4:-15550019 | Msa0152640:CDS |
| CACAATCAATGAGTGGTGGT+AGG | 0.579600 | 1_4:-15550808 | None:intergenic |
| GGAGACTTGTAGTAGTATGG+TGG | 0.580253 | 1_4:-15550373 | Msa0152640:CDS |
| CAAGTCTCCACCACCACCCA+AGG | 0.591323 | 1_4:+15550722 | None:intergenic |
| TCATATGGTGGTGGAGGTGA+CGG | 0.592055 | 1_4:-15549935 | Msa0152640:CDS |
| TGTAATAGTATGGTGGTGGA+GGG | 0.600596 | 1_4:-15550201 | Msa0152640:CDS |
| GTAATAGTATGGTGGTGGAG+GGG | 0.608902 | 1_4:-15550200 | Msa0152640:CDS |
| TGTACACATATGGAGGTGGT+GGG | 0.610740 | 1_4:-15550057 | Msa0152640:CDS |
| GGTGGAGGAAGGACCTTGGG+TGG | 0.617521 | 1_4:-15550735 | Msa0152640:CDS |
| GTACACATATGGAGGTGGTG+GGG | 0.646967 | 1_4:-15550056 | Msa0152640:CDS |
| TTGTACACATAAGGAGGTGG+TGG | 0.647121 | 1_4:-15550010 | Msa0152640:CDS |
| TCCACCACCATATGAACACA+AGG | 0.649190 | 1_4:+15549943 | None:intergenic |
| GACTTGTACACATATGGAGG+TGG | 0.651696 | 1_4:-15550061 | Msa0152640:CDS |
| GGAGCCTTGTGTTCATATGG+TGG | 0.655698 | 1_4:-15549947 | Msa0152640:CDS |
| GGAGACTTGTAGTAATATGG+AGG | 0.655752 | 1_4:-15550256 | Msa0152640:CDS |
| CCCTCACAATCAATGAGTGG+TGG | 0.659267 | 1_4:-15550812 | None:intergenic |
| GGGTGAGGATATGCAACGGG+TGG | 0.666106 | 1_4:-15550780 | Msa0152640:CDS |
| GGAGACTTGTAATAGTATGG+TGG | 0.673395 | 1_4:-15550208 | Msa0152640:CDS |
| GACTTGTACACATAAGGAGG+TGG | 0.676244 | 1_4:-15550013 | Msa0152640:CDS |
| CTACCCTCACAATCAATGAG+TGG | 0.682458 | 1_4:-15550815 | None:intergenic |
| GGATCCTTGTGTATATATGG+GGG | 0.683278 | 1_4:-15550304 | Msa0152640:CDS |
| ATGTGGGTGAGGATATGCAA+CGG | 0.702769 | 1_4:-15550784 | Msa0152640:CDS |
| GGTGACTTGTACACATATGG+AGG | 0.728444 | 1_4:-15550064 | Msa0152640:CDS |
| GGTGACTTGTACACATAAGG+AGG | 0.752993 | 1_4:-15550016 | Msa0152640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ACTTGTAATAGTAAGGTGTA+TGG | - | chr1_4:15550113-15550132 | Msa0152640:CDS | 30.0% | |
| CTTGTAATAGTAAGGTGTAT+GGG | - | chr1_4:15550114-15550133 | Msa0152640:CDS | 30.0% | |
| TTGTAATAGTAAGGTGTATG+GGG | - | chr1_4:15550115-15550134 | Msa0152640:CDS | 30.0% | |
| ATTTGTAGTAGTAAGGTGTA+TGG | - | chr1_4:15550257-15550276 | Msa0152640:CDS | 30.0% | |
| TTTGTAGTAGTAAGGTGTAT+GGG | - | chr1_4:15550258-15550277 | Msa0152640:CDS | 30.0% | |
| ACTTGTAATAGTAAGGTGTA+TGG | - | chr1_4:15550113-15550132 | Msa0152640:CDS | 30.0% | |
| CTTGTAATAGTAAGGTGTAT+GGG | - | chr1_4:15550114-15550133 | Msa0152640:CDS | 30.0% | |
| TTGTAATAGTAAGGTGTATG+GGG | - | chr1_4:15550115-15550134 | Msa0152640:CDS | 30.0% | |
| ATTTGTAGTAGTAAGGTGTA+TGG | - | chr1_4:15550257-15550276 | Msa0152640:CDS | 30.0% | |
| TTTGTAGTAGTAAGGTGTAT+GGG | - | chr1_4:15550258-15550277 | Msa0152640:CDS | 30.0% | |
| GGAGATTTATAGTAGTATGG+TGG | - | chr1_4:15550205-15550224 | Msa0152640:CDS | 35.0% | |
| GATTTATAGTAGTATGGTGG+TGG | - | chr1_4:15550208-15550227 | Msa0152640:CDS | 35.0% | |
| TTGTAGTAGTAAGGTGTATG+GGG | - | chr1_4:15550259-15550278 | Msa0152640:CDS | 35.0% | |
| GGAGGAGATTTATAGTAGTA+TGG | - | chr1_4:15550298-15550317 | Msa0152640:CDS | 35.0% | |
| GGAGATTTATAGTAGTATGG+TGG | - | chr1_4:15550205-15550224 | Msa0152640:CDS | 35.0% | |
| GATTTATAGTAGTATGGTGG+TGG | - | chr1_4:15550208-15550227 | Msa0152640:CDS | 35.0% | |
| GTGGATCCTTGTGTATATAT+GGG | - | chr1_4:15550415-15550434 | Msa0152640:intron | 35.0% | |
| TGGATCCTTGTGTATATATG+GGG | - | chr1_4:15550416-15550435 | Msa0152640:intron | 35.0% | |
| ACTTGTAGTAATATGGAGGT+GGG | - | chr1_4:15550469-15550488 | Msa0152640:intron | 35.0% | |
| GGAGATTTATAGTAGTATGG+TGG | - | chr1_4:15550205-15550224 | Msa0152640:CDS | 35.0% | |
| GATTTATAGTAGTATGGTGG+TGG | - | chr1_4:15550208-15550227 | Msa0152640:CDS | 35.0% | |
| TTGTAGTAGTAAGGTGTATG+GGG | - | chr1_4:15550259-15550278 | Msa0152640:CDS | 35.0% | |
| GGAGGAGATTTATAGTAGTA+TGG | - | chr1_4:15550298-15550317 | Msa0152640:CDS | 35.0% | |
| GGAGATTTATAGTAGTATGG+TGG | - | chr1_4:15550205-15550224 | Msa0152640:CDS | 35.0% | |
| GATTTATAGTAGTATGGTGG+TGG | - | chr1_4:15550208-15550227 | Msa0152640:CDS | 35.0% | |
| GTGGATCCTTGTGTATATAT+GGG | - | chr1_4:15550415-15550434 | Msa0152640:intron | 35.0% | |
| TGGATCCTTGTGTATATATG+GGG | - | chr1_4:15550416-15550435 | Msa0152640:intron | 35.0% | |
| ACTTGTAGTAATATGGAGGT+GGG | - | chr1_4:15550469-15550488 | Msa0152640:intron | 35.0% | |
| GGAGGAGAGTTGTAATAGTA+TGG | - | chr1_4:15549965-15549984 | Msa0152640:CDS | 40.0% | |
| GGAGAGTTGTAATAGTATGG+TGG | - | chr1_4:15549968-15549987 | Msa0152640:CDS | 40.0% | |
| GAGTTGTAATAGTATGGTGG+AGG | - | chr1_4:15549971-15549990 | Msa0152640:CDS | 40.0% | |
| ! | TGTAATAGTATGGTGGAGGA+AGG | - | chr1_4:15549975-15549994 | Msa0152640:CDS | 40.0% |
| ACTTGTAGTAGTAAGGTGTG+TGG | - | chr1_4:15550017-15550036 | Msa0152640:CDS | 40.0% | |
| CTTGTAGTAGTAAGGTGTGT+GGG | - | chr1_4:15550018-15550037 | Msa0152640:CDS | 40.0% | |
| TTGTAGTAGTAAGGTGTGTG+GGG | - | chr1_4:15550019-15550038 | Msa0152640:CDS | 40.0% | |
| GGAGGAGATTTGTAGTAGTA+TGG | - | chr1_4:15550058-15550077 | Msa0152640:CDS | 40.0% | |
| GGAGATTTGTAGTAGTATGG+TGG | - | chr1_4:15550061-15550080 | Msa0152640:CDS | 40.0% | |
| GATTTGTAGTAGTATGGTGG+TGG | - | chr1_4:15550064-15550083 | Msa0152640:CDS | 40.0% | |
| GGAGGAGACTTGTAATAGTA+AGG | - | chr1_4:15550106-15550125 | Msa0152640:CDS | 40.0% | |
| TAGTAAGGTGTATGGGGAAT+AGG | - | chr1_4:15550121-15550140 | Msa0152640:CDS | 40.0% | |
| GATTTGTAGTAGTATGGTGG+TGG | - | chr1_4:15550064-15550083 | Msa0152640:CDS | 40.0% | |
| GGGGGAGATTTATAGTAGTA+TGG | - | chr1_4:15550202-15550221 | Msa0152640:CDS | 40.0% | |
| !! | TTATAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550211-15550230 | Msa0152640:CDS | 40.0% |
| TAGTAAGGTGTATGGGGAAT+AGG | - | chr1_4:15550121-15550140 | Msa0152640:CDS | 40.0% | |
| !! | TTATAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550211-15550230 | Msa0152640:CDS | 40.0% |
| GGTGGGGATTTGTAATAGTA+TGG | - | chr1_4:15550393-15550412 | Msa0152640:CDS | 40.0% | |
| GGGGATTTGTAATAGTATGG+TGG | - | chr1_4:15550396-15550415 | Msa0152640:CDS | 40.0% | |
| GGTGGATCCTTGTGTATATA+TGG | - | chr1_4:15550414-15550433 | Msa0152640:intron | 40.0% | |
| GGATCCTTGTGTATATATGG+GGG | - | chr1_4:15550417-15550436 | Msa0152640:intron | 40.0% | |
| GGAGACTTGTAGTAATATGG+AGG | - | chr1_4:15550465-15550484 | Msa0152640:intron | 40.0% | |
| GACTTGTAGTAATATGGAGG+TGG | - | chr1_4:15550468-15550487 | Msa0152640:intron | 40.0% | |
| CTTGTAGTAATATGGAGGTG+GGG | - | chr1_4:15550470-15550489 | Msa0152640:intron | 40.0% | |
| TTGTAGTAATATGGAGGTGG+GGG | - | chr1_4:15550471-15550490 | Msa0152640:intron | 40.0% | |
| GGTGGAGACTTGTAATAGTA+TGG | - | chr1_4:15550510-15550529 | Msa0152640:intron | 40.0% | |
| GGAGACTTGTAATAGTATGG+TGG | - | chr1_4:15550513-15550532 | Msa0152640:intron | 40.0% | |
| GACTTGTAATAGTATGGTGG+TGG | - | chr1_4:15550516-15550535 | Msa0152640:intron | 40.0% | |
| !! | TTGTAATAGTATGGTGGTGG+AGG | - | chr1_4:15550519-15550538 | Msa0152640:intron | 40.0% |
| !! | TGTAATAGTATGGTGGTGGA+GGG | - | chr1_4:15550520-15550539 | Msa0152640:intron | 40.0% |
| GGAGGAGATTTGTAGTAGTA+AGG | - | chr1_4:15550058-15550077 | Msa0152640:CDS | 40.0% | |
| GGAGATTTGTAGTAGTAAGG+TGG | - | chr1_4:15550561-15550580 | Msa0152640:intron | 40.0% | |
| GATTTGTAGTAGTAAGGTGG+TGG | - | chr1_4:15550564-15550583 | Msa0152640:intron | 40.0% | |
| GACTCTTGTAGTAGTATGGT+GGG | - | chr1_4:15550610-15550629 | Msa0152640:intron | 40.0% | |
| ACTCTTGTAGTAGTATGGTG+GGG | - | chr1_4:15550611-15550630 | Msa0152640:intron | 40.0% | |
| GGAGGAGAGTTGTAATAGTA+TGG | - | chr1_4:15549965-15549984 | Msa0152640:CDS | 40.0% | |
| GGAGAGTTGTAATAGTATGG+TGG | - | chr1_4:15549968-15549987 | Msa0152640:CDS | 40.0% | |
| GAGTTGTAATAGTATGGTGG+AGG | - | chr1_4:15549971-15549990 | Msa0152640:CDS | 40.0% | |
| ! | TGTAATAGTATGGTGGAGGA+AGG | - | chr1_4:15549975-15549994 | Msa0152640:CDS | 40.0% |
| ACTTGTAGTAGTAAGGTGTG+TGG | - | chr1_4:15550017-15550036 | Msa0152640:CDS | 40.0% | |
| CTTGTAGTAGTAAGGTGTGT+GGG | - | chr1_4:15550018-15550037 | Msa0152640:CDS | 40.0% | |
| TTGTAGTAGTAAGGTGTGTG+GGG | - | chr1_4:15550019-15550038 | Msa0152640:CDS | 40.0% | |
| GGAGGAGATTTGTAGTAGTA+TGG | - | chr1_4:15550058-15550077 | Msa0152640:CDS | 40.0% | |
| GGAGATTTGTAGTAGTATGG+TGG | - | chr1_4:15550061-15550080 | Msa0152640:CDS | 40.0% | |
| GATTTGTAGTAGTATGGTGG+TGG | - | chr1_4:15550064-15550083 | Msa0152640:CDS | 40.0% | |
| GGAGGAGACTTGTAATAGTA+AGG | - | chr1_4:15550106-15550125 | Msa0152640:CDS | 40.0% | |
| TAGTAAGGTGTATGGGGAAT+AGG | - | chr1_4:15550121-15550140 | Msa0152640:CDS | 40.0% | |
| GATTTGTAGTAGTATGGTGG+TGG | - | chr1_4:15550064-15550083 | Msa0152640:CDS | 40.0% | |
| GGGGGAGATTTATAGTAGTA+TGG | - | chr1_4:15550202-15550221 | Msa0152640:CDS | 40.0% | |
| !! | TTATAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550211-15550230 | Msa0152640:CDS | 40.0% |
| TAGTAAGGTGTATGGGGAAT+AGG | - | chr1_4:15550121-15550140 | Msa0152640:CDS | 40.0% | |
| !! | TTATAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550211-15550230 | Msa0152640:CDS | 40.0% |
| GGTGGGGATTTGTAATAGTA+TGG | - | chr1_4:15550393-15550412 | Msa0152640:CDS | 40.0% | |
| GGGGATTTGTAATAGTATGG+TGG | - | chr1_4:15550396-15550415 | Msa0152640:CDS | 40.0% | |
| GGTGGATCCTTGTGTATATA+TGG | - | chr1_4:15550414-15550433 | Msa0152640:intron | 40.0% | |
| GGATCCTTGTGTATATATGG+GGG | - | chr1_4:15550417-15550436 | Msa0152640:intron | 40.0% | |
| GGAGACTTGTAGTAATATGG+AGG | - | chr1_4:15550465-15550484 | Msa0152640:intron | 40.0% | |
| GACTTGTAGTAATATGGAGG+TGG | - | chr1_4:15550468-15550487 | Msa0152640:intron | 40.0% | |
| CTTGTAGTAATATGGAGGTG+GGG | - | chr1_4:15550470-15550489 | Msa0152640:intron | 40.0% | |
| TTGTAGTAATATGGAGGTGG+GGG | - | chr1_4:15550471-15550490 | Msa0152640:intron | 40.0% | |
| GGTGGAGACTTGTAATAGTA+TGG | - | chr1_4:15550510-15550529 | Msa0152640:intron | 40.0% | |
| GGAGACTTGTAATAGTATGG+TGG | - | chr1_4:15550513-15550532 | Msa0152640:intron | 40.0% | |
| GACTTGTAATAGTATGGTGG+TGG | - | chr1_4:15550516-15550535 | Msa0152640:intron | 40.0% | |
| !! | TTGTAATAGTATGGTGGTGG+AGG | - | chr1_4:15550519-15550538 | Msa0152640:intron | 40.0% |
| !! | TGTAATAGTATGGTGGTGGA+GGG | - | chr1_4:15550520-15550539 | Msa0152640:intron | 40.0% |
| GGAGGAGATTTGTAGTAGTA+AGG | - | chr1_4:15550058-15550077 | Msa0152640:CDS | 40.0% | |
| GGAGATTTGTAGTAGTAAGG+TGG | - | chr1_4:15550561-15550580 | Msa0152640:intron | 40.0% | |
| GATTTGTAGTAGTAAGGTGG+TGG | - | chr1_4:15550564-15550583 | Msa0152640:intron | 40.0% | |
| GACTCTTGTAGTAGTATGGT+GGG | - | chr1_4:15550610-15550629 | Msa0152640:intron | 40.0% | |
| ACTCTTGTAGTAGTATGGTG+GGG | - | chr1_4:15550611-15550630 | Msa0152640:intron | 40.0% | |
| ATGTGGGTGAGGATATGCAA+CGG | - | chr1_4:15549937-15549956 | Msa0152640:CDS | 45.0% | |
| GGTGGAGACTTGTAGTAGTA+AGG | - | chr1_4:15550010-15550029 | Msa0152640:CDS | 45.0% | |
| TAGTAAGGTGTGTGGGGAAT+AGG | - | chr1_4:15550025-15550044 | Msa0152640:CDS | 45.0% | |
| !! | TTGTAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550067-15550086 | Msa0152640:CDS | 45.0% |
| GGAGGGGATTTGTAGTAGTA+TGG | - | chr1_4:15550154-15550173 | Msa0152640:intron | 45.0% | |
| GGGGATTTGTAGTAGTATGG+TGG | - | chr1_4:15550157-15550176 | Msa0152640:intron | 45.0% | |
| !! | TTGTAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550067-15550086 | Msa0152640:CDS | 45.0% |
| ! | GGGGGTGATTTGTAGTAGTA+AGG | - | chr1_4:15550250-15550269 | Msa0152640:CDS | 45.0% |
| TGGGGAGACTTGTAGTAGTA+TGG | - | chr1_4:15550345-15550364 | Msa0152640:CDS | 45.0% | |
| GGAGACTTGTAGTAGTATGG+TGG | - | chr1_4:15550348-15550367 | Msa0152640:CDS | 45.0% | |
| GACTTGTAGTAGTATGGTGG+TGG | - | chr1_4:15550351-15550370 | Msa0152640:CDS | 45.0% | |
| !! | TTGTAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550067-15550086 | Msa0152640:CDS | 45.0% |
| TCCTTGTGTATATATGGGGG+TGG | - | chr1_4:15550420-15550439 | Msa0152640:intron | 45.0% | |
| TCCACCCCCATATATACACA+AGG | + | chr1_4:15550424-15550443 | None:intergenic | 45.0% | |
| TTGTGTATATATGGGGGTGG+AGG | - | chr1_4:15550423-15550442 | Msa0152640:intron | 45.0% | |
| TGTGTATATATGGGGGTGGA+GGG | - | chr1_4:15550424-15550443 | Msa0152640:intron | 45.0% | |
| GGGGGAGACTTGTAGTAATA+TGG | - | chr1_4:15550462-15550481 | Msa0152640:intron | 45.0% | |
| !! | GTAATAGTATGGTGGTGGAG+GGG | - | chr1_4:15550521-15550540 | Msa0152640:intron | 45.0% |
| ! | TTGTAGTAGTAAGGTGGTGG+AGG | - | chr1_4:15550567-15550586 | Msa0152640:intron | 45.0% |
| GGAGGACTCTTGTAGTAGTA+TGG | - | chr1_4:15550606-15550625 | Msa0152640:intron | 45.0% | |
| GGACTCTTGTAGTAGTATGG+TGG | - | chr1_4:15550609-15550628 | Msa0152640:intron | 45.0% | |
| CTCTTGTAGTAGTATGGTGG+GGG | - | chr1_4:15550612-15550631 | Msa0152640:intron | 45.0% | |
| ! | GGTGGTGACTTGTACACATA+TGG | - | chr1_4:15550654-15550673 | Msa0152640:intron | 45.0% |
| ! | GGTGACTTGTACACATATGG+AGG | - | chr1_4:15550657-15550676 | Msa0152640:intron | 45.0% |
| GACTTGTACACATATGGAGG+TGG | - | chr1_4:15550660-15550679 | Msa0152640:intron | 45.0% | |
| TTGTACACATATGGAGGTGG+TGG | - | chr1_4:15550663-15550682 | Msa0152640:intron | 45.0% | |
| TGTACACATATGGAGGTGGT+GGG | - | chr1_4:15550664-15550683 | Msa0152640:intron | 45.0% | |
| ! | GGTGGTGACTTGTACACATA+AGG | - | chr1_4:15550654-15550673 | Msa0152640:intron | 45.0% |
| ! | GGTGACTTGTACACATAAGG+AGG | - | chr1_4:15550705-15550724 | Msa0152640:intron | 45.0% |
| GACTTGTACACATAAGGAGG+TGG | - | chr1_4:15550708-15550727 | Msa0152640:intron | 45.0% | |
| TTGTACACATAAGGAGGTGG+TGG | - | chr1_4:15550711-15550730 | Msa0152640:intron | 45.0% | |
| ! | GGTGACTTGTACTCATAAGC+AGG | - | chr1_4:15550753-15550772 | Msa0152640:CDS | 45.0% |
| TCCACCACCATATGAACACA+AGG | + | chr1_4:15550781-15550800 | None:intergenic | 45.0% | |
| !! | TTGTGTTCATATGGTGGTGG+AGG | - | chr1_4:15550780-15550799 | Msa0152640:CDS | 45.0% |
| ATGTGGGTGAGGATATGCAA+CGG | - | chr1_4:15549937-15549956 | Msa0152640:CDS | 45.0% | |
| GGTGGAGACTTGTAGTAGTA+AGG | - | chr1_4:15550010-15550029 | Msa0152640:CDS | 45.0% | |
| TAGTAAGGTGTGTGGGGAAT+AGG | - | chr1_4:15550025-15550044 | Msa0152640:CDS | 45.0% | |
| !! | TTGTAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550067-15550086 | Msa0152640:CDS | 45.0% |
| GGAGGGGATTTGTAGTAGTA+TGG | - | chr1_4:15550154-15550173 | Msa0152640:intron | 45.0% | |
| GGGGATTTGTAGTAGTATGG+TGG | - | chr1_4:15550157-15550176 | Msa0152640:intron | 45.0% | |
| !! | TTGTAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550067-15550086 | Msa0152640:CDS | 45.0% |
| ! | GGGGGTGATTTGTAGTAGTA+AGG | - | chr1_4:15550250-15550269 | Msa0152640:CDS | 45.0% |
| TGGGGAGACTTGTAGTAGTA+TGG | - | chr1_4:15550345-15550364 | Msa0152640:CDS | 45.0% | |
| GGAGACTTGTAGTAGTATGG+TGG | - | chr1_4:15550348-15550367 | Msa0152640:CDS | 45.0% | |
| GACTTGTAGTAGTATGGTGG+TGG | - | chr1_4:15550351-15550370 | Msa0152640:CDS | 45.0% | |
| !! | TTGTAGTAGTATGGTGGTGG+AGG | - | chr1_4:15550067-15550086 | Msa0152640:CDS | 45.0% |
| TCCTTGTGTATATATGGGGG+TGG | - | chr1_4:15550420-15550439 | Msa0152640:intron | 45.0% | |
| TCCACCCCCATATATACACA+AGG | + | chr1_4:15550424-15550443 | None:intergenic | 45.0% | |
| TTGTGTATATATGGGGGTGG+AGG | - | chr1_4:15550423-15550442 | Msa0152640:intron | 45.0% | |
| TGTGTATATATGGGGGTGGA+GGG | - | chr1_4:15550424-15550443 | Msa0152640:intron | 45.0% | |
| GGGGGAGACTTGTAGTAATA+TGG | - | chr1_4:15550462-15550481 | Msa0152640:intron | 45.0% | |
| !! | GTAATAGTATGGTGGTGGAG+GGG | - | chr1_4:15550521-15550540 | Msa0152640:intron | 45.0% |
| ! | TTGTAGTAGTAAGGTGGTGG+AGG | - | chr1_4:15550567-15550586 | Msa0152640:intron | 45.0% |
| GGAGGACTCTTGTAGTAGTA+TGG | - | chr1_4:15550606-15550625 | Msa0152640:intron | 45.0% | |
| GGACTCTTGTAGTAGTATGG+TGG | - | chr1_4:15550609-15550628 | Msa0152640:intron | 45.0% | |
| CTCTTGTAGTAGTATGGTGG+GGG | - | chr1_4:15550612-15550631 | Msa0152640:intron | 45.0% | |
| ! | GGTGGTGACTTGTACACATA+TGG | - | chr1_4:15550654-15550673 | Msa0152640:intron | 45.0% |
| ! | GGTGACTTGTACACATATGG+AGG | - | chr1_4:15550657-15550676 | Msa0152640:intron | 45.0% |
| GACTTGTACACATATGGAGG+TGG | - | chr1_4:15550660-15550679 | Msa0152640:intron | 45.0% | |
| TTGTACACATATGGAGGTGG+TGG | - | chr1_4:15550663-15550682 | Msa0152640:intron | 45.0% | |
| TGTACACATATGGAGGTGGT+GGG | - | chr1_4:15550664-15550683 | Msa0152640:intron | 45.0% | |
| ! | GGTGGTGACTTGTACACATA+AGG | - | chr1_4:15550654-15550673 | Msa0152640:intron | 45.0% |
| ! | GGTGACTTGTACACATAAGG+AGG | - | chr1_4:15550705-15550724 | Msa0152640:intron | 45.0% |
| GACTTGTACACATAAGGAGG+TGG | - | chr1_4:15550708-15550727 | Msa0152640:intron | 45.0% | |
| TTGTACACATAAGGAGGTGG+TGG | - | chr1_4:15550711-15550730 | Msa0152640:intron | 45.0% | |
| ! | GGTGACTTGTACTCATAAGC+AGG | - | chr1_4:15550753-15550772 | Msa0152640:CDS | 45.0% |
| TCCACCACCATATGAACACA+AGG | + | chr1_4:15550781-15550800 | None:intergenic | 45.0% | |
| !! | TTGTGTTCATATGGTGGTGG+AGG | - | chr1_4:15550780-15550799 | Msa0152640:CDS | 45.0% |
| ATGAGTGGTGGTAGGGATGT+GGG | - | chr1_4:15549921-15549940 | Msa0152640:CDS | 50.0% | |
| TGTGGGTGAGGATATGCAAC+GGG | - | chr1_4:15549938-15549957 | Msa0152640:CDS | 50.0% | |
| ! | TATGGTGGAGGAAGGACCTT+GGG | - | chr1_4:15549983-15550002 | Msa0152640:CDS | 50.0% |
| TGTGGGGAATAGGAGATGGA+GGG | - | chr1_4:15550035-15550054 | Msa0152640:CDS | 50.0% | |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| GGTGTATGGGGAATAGGAGA+TGG | - | chr1_4:15550127-15550146 | Msa0152640:CDS | 50.0% | |
| GTATGGGGAATAGGAGATGG+AGG | - | chr1_4:15550130-15550149 | Msa0152640:CDS | 50.0% | |
| GAATAGGAGATGGAGGAGGA+GGG | - | chr1_4:15550137-15550156 | Msa0152640:CDS | 50.0% | |
| AATAGGAGATGGAGGAGGAG+GGG | - | chr1_4:15550138-15550157 | Msa0152640:CDS | 50.0% | |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| GGTGTATGGGGAATAGGAGA+TGG | - | chr1_4:15550127-15550146 | Msa0152640:CDS | 50.0% | |
| GTATGGGGAATAGGAGATGG+AGG | - | chr1_4:15550130-15550149 | Msa0152640:CDS | 50.0% | |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| GTGTATATATGGGGGTGGAG+GGG | - | chr1_4:15550425-15550444 | Msa0152640:intron | 50.0% | |
| TAATATGGAGGTGGGGGTGA+TGG | - | chr1_4:15550477-15550496 | Msa0152640:intron | 50.0% | |
| !! | TAGTAAGGTGGTGGAGGTGA+AGG | - | chr1_4:15550573-15550592 | Msa0152640:intron | 50.0% |
| ! | TTGTAGTAGTATGGTGGGGG+TGG | - | chr1_4:15550615-15550634 | Msa0152640:intron | 50.0% |
| ! | TGTAGTAGTATGGTGGGGGT+GGG | - | chr1_4:15550616-15550635 | Msa0152640:intron | 50.0% |
| GTACACATATGGAGGTGGTG+GGG | - | chr1_4:15550665-15550684 | Msa0152640:intron | 50.0% | |
| ! | ACATAAGGAGGTGGTGGTGA+AGG | - | chr1_4:15550717-15550736 | Msa0152640:CDS | 50.0% |
| ! | GCAGGAGCCTTGTGTTCATA+TGG | - | chr1_4:15550771-15550790 | Msa0152640:CDS | 50.0% |
| ! | GGAGCCTTGTGTTCATATGG+TGG | - | chr1_4:15550774-15550793 | Msa0152640:CDS | 50.0% |
| GCCTTGTGTTCATATGGTGG+TGG | - | chr1_4:15550777-15550796 | Msa0152640:CDS | 50.0% | |
| !! | TCATATGGTGGTGGAGGTGA+CGG | - | chr1_4:15550786-15550805 | Msa0152640:CDS | 50.0% |
| ATGAGTGGTGGTAGGGATGT+GGG | - | chr1_4:15549921-15549940 | Msa0152640:CDS | 50.0% | |
| TGTGGGTGAGGATATGCAAC+GGG | - | chr1_4:15549938-15549957 | Msa0152640:CDS | 50.0% | |
| ! | TATGGTGGAGGAAGGACCTT+GGG | - | chr1_4:15549983-15550002 | Msa0152640:CDS | 50.0% |
| TGTGGGGAATAGGAGATGGA+GGG | - | chr1_4:15550035-15550054 | Msa0152640:CDS | 50.0% | |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| GGTGTATGGGGAATAGGAGA+TGG | - | chr1_4:15550127-15550146 | Msa0152640:CDS | 50.0% | |
| GTATGGGGAATAGGAGATGG+AGG | - | chr1_4:15550130-15550149 | Msa0152640:CDS | 50.0% | |
| GAATAGGAGATGGAGGAGGA+GGG | - | chr1_4:15550137-15550156 | Msa0152640:CDS | 50.0% | |
| AATAGGAGATGGAGGAGGAG+GGG | - | chr1_4:15550138-15550157 | Msa0152640:CDS | 50.0% | |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| GGTGTATGGGGAATAGGAGA+TGG | - | chr1_4:15550127-15550146 | Msa0152640:CDS | 50.0% | |
| GTATGGGGAATAGGAGATGG+AGG | - | chr1_4:15550130-15550149 | Msa0152640:CDS | 50.0% | |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| !! | TAGTATGGTGGTGGAGGAGA+TGG | - | chr1_4:15550073-15550092 | Msa0152640:CDS | 50.0% |
| GTGTATATATGGGGGTGGAG+GGG | - | chr1_4:15550425-15550444 | Msa0152640:intron | 50.0% | |
| TAATATGGAGGTGGGGGTGA+TGG | - | chr1_4:15550477-15550496 | Msa0152640:intron | 50.0% | |
| !! | TAGTAAGGTGGTGGAGGTGA+AGG | - | chr1_4:15550573-15550592 | Msa0152640:intron | 50.0% |
| ! | TTGTAGTAGTATGGTGGGGG+TGG | - | chr1_4:15550615-15550634 | Msa0152640:intron | 50.0% |
| ! | TGTAGTAGTATGGTGGGGGT+GGG | - | chr1_4:15550616-15550635 | Msa0152640:intron | 50.0% |
| GTACACATATGGAGGTGGTG+GGG | - | chr1_4:15550665-15550684 | Msa0152640:intron | 50.0% | |
| ! | ACATAAGGAGGTGGTGGTGA+AGG | - | chr1_4:15550717-15550736 | Msa0152640:CDS | 50.0% |
| ! | GCAGGAGCCTTGTGTTCATA+TGG | - | chr1_4:15550771-15550790 | Msa0152640:CDS | 50.0% |
| ! | GGAGCCTTGTGTTCATATGG+TGG | - | chr1_4:15550774-15550793 | Msa0152640:CDS | 50.0% |
| GCCTTGTGTTCATATGGTGG+TGG | - | chr1_4:15550777-15550796 | Msa0152640:CDS | 50.0% | |
| !! | TCATATGGTGGTGGAGGTGA+CGG | - | chr1_4:15550786-15550805 | Msa0152640:CDS | 50.0% |
| TGAGGATATGCAACGGGTGG+AGG | - | chr1_4:15549944-15549963 | Msa0152640:CDS | 55.0% | |
| ! | GTATGGTGGAGGAAGGACCT+TGG | - | chr1_4:15549982-15550001 | Msa0152640:CDS | 55.0% |
| GGTGTGTGGGGAATAGGAGA+TGG | - | chr1_4:15550031-15550050 | Msa0152640:CDS | 55.0% | |
| GTGTGGGGAATAGGAGATGG+AGG | - | chr1_4:15550034-15550053 | Msa0152640:CDS | 55.0% | |
| GTGGGGAATAGGAGATGGAG+GGG | - | chr1_4:15550036-15550055 | Msa0152640:CDS | 55.0% | |
| TGGGGAATAGGAGATGGAGG+GGG | - | chr1_4:15550037-15550056 | Msa0152640:CDS | 55.0% | |
| TGGGGAATAGGAGATGGAGG+AGG | - | chr1_4:15550037-15550056 | Msa0152640:CDS | 55.0% | |
| GGAATAGGAGATGGAGGAGG+AGG | - | chr1_4:15550136-15550155 | Msa0152640:CDS | 55.0% | |
| ! | GTGGTGGAGGAGATGGTGAA+GGG | - | chr1_4:15550080-15550099 | Msa0152640:CDS | 55.0% |
| TGGTGGAGGAGATGGTGAAG+GGG | - | chr1_4:15550081-15550100 | Msa0152640:CDS | 55.0% | |
| ! | GTGGTGGAGGAGATGGTGAA+GGG | - | chr1_4:15550080-15550099 | Msa0152640:CDS | 55.0% |
| TGGTGGAGGAGATGGTGAAG+GGG | - | chr1_4:15550081-15550100 | Msa0152640:CDS | 55.0% | |
| TGGGGAATAGGAGATGGAGG+AGG | - | chr1_4:15550037-15550056 | Msa0152640:CDS | 55.0% | |
| GGAATAGGAGATGGAGGAGG+AGG | - | chr1_4:15550136-15550155 | Msa0152640:CDS | 55.0% | |
| ! | GTGGTGGAGGAGATGGTGAA+GGG | - | chr1_4:15550080-15550099 | Msa0152640:CDS | 55.0% |
| TGGTGGAGGAGATGGTGAAG+GGG | - | chr1_4:15550081-15550100 | Msa0152640:CDS | 55.0% | |
| ! | GAGATGGTGAAGGTGGTGGT+GGG | - | chr1_4:15550376-15550395 | Msa0152640:CDS | 55.0% |
| ! | AGATGGTGAAGGTGGTGGTG+GGG | - | chr1_4:15550377-15550396 | Msa0152640:CDS | 55.0% |
| ATATATGGGGGTGGAGGGGA+TGG | - | chr1_4:15550429-15550448 | Msa0152640:intron | 55.0% | |
| !! | TAGTATGGTGGTGGAGGGGA+AGG | - | chr1_4:15550525-15550544 | Msa0152640:intron | 55.0% |
| ! | GTAGTAGTATGGTGGGGGTG+GGG | - | chr1_4:15550617-15550636 | Msa0152640:intron | 55.0% |
| !! | ACATATGGAGGTGGTGGGGA+AGG | - | chr1_4:15550669-15550688 | Msa0152640:intron | 55.0% |
| TGAGGATATGCAACGGGTGG+AGG | - | chr1_4:15549944-15549963 | Msa0152640:CDS | 55.0% | |
| ! | GTATGGTGGAGGAAGGACCT+TGG | - | chr1_4:15549982-15550001 | Msa0152640:CDS | 55.0% |
| GGTGTGTGGGGAATAGGAGA+TGG | - | chr1_4:15550031-15550050 | Msa0152640:CDS | 55.0% | |
| GTGTGGGGAATAGGAGATGG+AGG | - | chr1_4:15550034-15550053 | Msa0152640:CDS | 55.0% | |
| GTGGGGAATAGGAGATGGAG+GGG | - | chr1_4:15550036-15550055 | Msa0152640:CDS | 55.0% | |
| TGGGGAATAGGAGATGGAGG+GGG | - | chr1_4:15550037-15550056 | Msa0152640:CDS | 55.0% | |
| TGGGGAATAGGAGATGGAGG+AGG | - | chr1_4:15550037-15550056 | Msa0152640:CDS | 55.0% | |
| GGAATAGGAGATGGAGGAGG+AGG | - | chr1_4:15550136-15550155 | Msa0152640:CDS | 55.0% | |
| ! | GTGGTGGAGGAGATGGTGAA+GGG | - | chr1_4:15550080-15550099 | Msa0152640:CDS | 55.0% |
| TGGTGGAGGAGATGGTGAAG+GGG | - | chr1_4:15550081-15550100 | Msa0152640:CDS | 55.0% | |
| ! | GTGGTGGAGGAGATGGTGAA+GGG | - | chr1_4:15550080-15550099 | Msa0152640:CDS | 55.0% |
| TGGTGGAGGAGATGGTGAAG+GGG | - | chr1_4:15550081-15550100 | Msa0152640:CDS | 55.0% | |
| TGGGGAATAGGAGATGGAGG+AGG | - | chr1_4:15550037-15550056 | Msa0152640:CDS | 55.0% | |
| GGAATAGGAGATGGAGGAGG+AGG | - | chr1_4:15550136-15550155 | Msa0152640:CDS | 55.0% | |
| ! | GTGGTGGAGGAGATGGTGAA+GGG | - | chr1_4:15550080-15550099 | Msa0152640:CDS | 55.0% |
| TGGTGGAGGAGATGGTGAAG+GGG | - | chr1_4:15550081-15550100 | Msa0152640:CDS | 55.0% | |
| ! | GAGATGGTGAAGGTGGTGGT+GGG | - | chr1_4:15550376-15550395 | Msa0152640:CDS | 55.0% |
| ! | AGATGGTGAAGGTGGTGGTG+GGG | - | chr1_4:15550377-15550396 | Msa0152640:CDS | 55.0% |
| ATATATGGGGGTGGAGGGGA+TGG | - | chr1_4:15550429-15550448 | Msa0152640:intron | 55.0% | |
| !! | TAGTATGGTGGTGGAGGGGA+AGG | - | chr1_4:15550525-15550544 | Msa0152640:intron | 55.0% |
| ! | GTAGTAGTATGGTGGGGGTG+GGG | - | chr1_4:15550617-15550636 | Msa0152640:intron | 55.0% |
| !! | ACATATGGAGGTGGTGGGGA+AGG | - | chr1_4:15550669-15550688 | Msa0152640:intron | 55.0% |
| TGGTGGTAGGGATGTGGGTG+AGG | - | chr1_4:15549926-15549945 | Msa0152640:CDS | 60.0% | |
| GGGTGAGGATATGCAACGGG+TGG | - | chr1_4:15549941-15549960 | Msa0152640:CDS | 60.0% | |
| GGATATGCAACGGGTGGAGG+AGG | - | chr1_4:15549947-15549966 | Msa0152640:CDS | 60.0% | |
| CAAGTCTCCACCACCACCCA+AGG | + | chr1_4:15550002-15550021 | None:intergenic | 60.0% | |
| GGAATAGGAGATGGAGGGGG+AGG | - | chr1_4:15550040-15550059 | Msa0152640:CDS | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+TGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GGAGGAGATGGTGAAGGTGG+TGG | - | chr1_4:15550085-15550104 | Msa0152640:CDS | 60.0% | |
| ! | GGAGATGGTGAAGGTGGTGG+AGG | - | chr1_4:15550088-15550107 | Msa0152640:CDS | 60.0% |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+GGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GAGGAGATGGTGAAGGGGGT+GGG | - | chr1_4:15550182-15550201 | Msa0152640:intron | 60.0% | |
| AGGAGATGGTGAAGGGGGTG+GGG | - | chr1_4:15550183-15550202 | Msa0152640:intron | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+GGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GAGGAGATGGTGAAGGGGGT+GGG | - | chr1_4:15550182-15550201 | Msa0152640:intron | 60.0% | |
| AGGAGATGGTGAAGGGGGTG+GGG | - | chr1_4:15550183-15550202 | Msa0152640:intron | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+GGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GAGGAGATGGTGAAGGGGGT+GGG | - | chr1_4:15550182-15550201 | Msa0152640:intron | 60.0% | |
| AGGAGATGGTGAAGGGGGTG+GGG | - | chr1_4:15550183-15550202 | Msa0152640:intron | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+TGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GGAGGAGATGGTGAAGGTGG+TGG | - | chr1_4:15550085-15550104 | Msa0152640:CDS | 60.0% | |
| ! | GGAGATGGTGAAGGTGGTGG+TGG | - | chr1_4:15550088-15550107 | Msa0152640:CDS | 60.0% |
| !! | GGTGATGGAGATGGTGGTGG+TGG | - | chr1_4:15550492-15550511 | Msa0152640:intron | 60.0% |
| !! | GGTGGTGGAGGTGAAGGAGA+AGG | - | chr1_4:15550579-15550598 | Msa0152640:intron | 60.0% |
| GGTGGAGGTGAAGGAGAAGG+TGG | - | chr1_4:15550582-15550601 | Msa0152640:intron | 60.0% | |
| GGAGGTGAAGGAGAAGGTGG+TGG | - | chr1_4:15550585-15550604 | Msa0152640:intron | 60.0% | |
| ! | GGTGAAGGAGAAGGTGGTGG+AGG | - | chr1_4:15550588-15550607 | Msa0152640:intron | 60.0% |
| ! | TAGTATGGTGGGGGTGGGGA+AGG | - | chr1_4:15550621-15550640 | Msa0152640:intron | 60.0% |
| ! | GGAGGTGGTGGTGAAGGAGT+TGG | - | chr1_4:15550723-15550742 | Msa0152640:CDS | 60.0% |
| ! | GGTGGTGGTGAAGGAGTTGG+TGG | - | chr1_4:15550726-15550745 | Msa0152640:CDS | 60.0% |
| !! | GGTGGTGAAGGAGTTGGTGG+TGG | - | chr1_4:15550729-15550748 | Msa0152640:CDS | 60.0% |
| !! | GGTGAAGGAGTTGGTGGTGG+TGG | - | chr1_4:15550732-15550751 | Msa0152640:CDS | 60.0% |
| TGGTGGTAGGGATGTGGGTG+AGG | - | chr1_4:15549926-15549945 | Msa0152640:CDS | 60.0% | |
| GGGTGAGGATATGCAACGGG+TGG | - | chr1_4:15549941-15549960 | Msa0152640:CDS | 60.0% | |
| GGATATGCAACGGGTGGAGG+AGG | - | chr1_4:15549947-15549966 | Msa0152640:CDS | 60.0% | |
| CAAGTCTCCACCACCACCCA+AGG | + | chr1_4:15550002-15550021 | None:intergenic | 60.0% | |
| GGAATAGGAGATGGAGGGGG+AGG | - | chr1_4:15550040-15550059 | Msa0152640:CDS | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+TGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GGAGGAGATGGTGAAGGTGG+TGG | - | chr1_4:15550085-15550104 | Msa0152640:CDS | 60.0% | |
| ! | GGAGATGGTGAAGGTGGTGG+AGG | - | chr1_4:15550088-15550107 | Msa0152640:CDS | 60.0% |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+GGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GAGGAGATGGTGAAGGGGGT+GGG | - | chr1_4:15550182-15550201 | Msa0152640:intron | 60.0% | |
| AGGAGATGGTGAAGGGGGTG+GGG | - | chr1_4:15550183-15550202 | Msa0152640:intron | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+GGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GAGGAGATGGTGAAGGGGGT+GGG | - | chr1_4:15550182-15550201 | Msa0152640:intron | 60.0% | |
| AGGAGATGGTGAAGGGGGTG+GGG | - | chr1_4:15550183-15550202 | Msa0152640:intron | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+GGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GAGGAGATGGTGAAGGGGGT+GGG | - | chr1_4:15550182-15550201 | Msa0152640:intron | 60.0% | |
| AGGAGATGGTGAAGGGGGTG+GGG | - | chr1_4:15550183-15550202 | Msa0152640:intron | 60.0% | |
| !! | GGTGGTGGAGGAGATGGTGA+AGG | - | chr1_4:15550079-15550098 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAGATGGTGAAGG+TGG | - | chr1_4:15550082-15550101 | Msa0152640:CDS | 60.0% | |
| GGAGGAGATGGTGAAGGTGG+TGG | - | chr1_4:15550085-15550104 | Msa0152640:CDS | 60.0% | |
| ! | GGAGATGGTGAAGGTGGTGG+TGG | - | chr1_4:15550088-15550107 | Msa0152640:CDS | 60.0% |
| !! | GGTGATGGAGATGGTGGTGG+TGG | - | chr1_4:15550492-15550511 | Msa0152640:intron | 60.0% |
| !! | GGTGGTGGAGGTGAAGGAGA+AGG | - | chr1_4:15550579-15550598 | Msa0152640:intron | 60.0% |
| GGTGGAGGTGAAGGAGAAGG+TGG | - | chr1_4:15550582-15550601 | Msa0152640:intron | 60.0% | |
| GGAGGTGAAGGAGAAGGTGG+TGG | - | chr1_4:15550585-15550604 | Msa0152640:intron | 60.0% | |
| ! | GGTGAAGGAGAAGGTGGTGG+AGG | - | chr1_4:15550588-15550607 | Msa0152640:intron | 60.0% |
| ! | TAGTATGGTGGGGGTGGGGA+AGG | - | chr1_4:15550621-15550640 | Msa0152640:intron | 60.0% |
| ! | GGAGGTGGTGGTGAAGGAGT+TGG | - | chr1_4:15550723-15550742 | Msa0152640:CDS | 60.0% |
| ! | GGTGGTGGTGAAGGAGTTGG+TGG | - | chr1_4:15550726-15550745 | Msa0152640:CDS | 60.0% |
| !! | GGTGGTGAAGGAGTTGGTGG+TGG | - | chr1_4:15550729-15550748 | Msa0152640:CDS | 60.0% |
| !! | GGTGAAGGAGTTGGTGGTGG+TGG | - | chr1_4:15550732-15550751 | Msa0152640:CDS | 60.0% |
| GGTGGAGGAAGGACCTTGGG+TGG | - | chr1_4:15549986-15550005 | Msa0152640:CDS | 65.0% | |
| GGAGGAAGGACCTTGGGTGG+TGG | - | chr1_4:15549989-15550008 | Msa0152640:CDS | 65.0% | |
| ! | GGAAGGACCTTGGGTGGTGG+TGG | - | chr1_4:15549992-15550011 | Msa0152640:CDS | 65.0% |
| GGAGGAGATGGTGAAGGGGG+TGG | - | chr1_4:15550181-15550200 | Msa0152640:intron | 65.0% | |
| GGAGATGGTGAAGGGGGTGG+GGG | - | chr1_4:15550184-15550203 | Msa0152640:intron | 65.0% | |
| GGAGGAGATGGTGAAGGGGG+TGG | - | chr1_4:15550181-15550200 | Msa0152640:intron | 65.0% | |
| GGAGATGGTGAAGGGGGTGG+GGG | - | chr1_4:15550184-15550203 | Msa0152640:intron | 65.0% | |
| GGAGGAGATGGTGAAGGGGG+TGG | - | chr1_4:15550181-15550200 | Msa0152640:intron | 65.0% | |
| GAGGGGATGGTGAGGGTGGT+GGG | - | chr1_4:15550442-15550461 | Msa0152640:intron | 65.0% | |
| AGGGGATGGTGAGGGTGGTG+GGG | - | chr1_4:15550443-15550462 | Msa0152640:intron | 65.0% | |
| !! | GGAGGTGGGGGTGATGGAGA+TGG | - | chr1_4:15550483-15550502 | Msa0152640:intron | 65.0% |
| !! | GGTGGGGGTGATGGAGATGG+TGG | - | chr1_4:15550486-15550505 | Msa0152640:intron | 65.0% |
| !! | GGGGGTGATGGAGATGGTGG+TGG | - | chr1_4:15550489-15550508 | Msa0152640:intron | 65.0% |
| !! | TGGTGGTGGAGGGGAAGGTG+AGG | - | chr1_4:15550530-15550549 | Msa0152640:intron | 65.0% |
| !! | GGTGGTGGAGGGGAAGGTGA+GGG | - | chr1_4:15550531-15550550 | Msa0152640:intron | 65.0% |
| !! | TGGAGGTGGTGGGGAAGGTG+AGG | - | chr1_4:15550674-15550693 | Msa0152640:intron | 65.0% |
| !! | GGAGGTGGTGGGGAAGGTGA+GGG | - | chr1_4:15550675-15550694 | Msa0152640:intron | 65.0% |
| !! | GGTGGTGGAGGTGACGGTGA+TGG | - | chr1_4:15550792-15550811 | Msa0152640:CDS | 65.0% |
| ! | GGTGGAGGTGACGGTGATGG+AGG | - | chr1_4:15550795-15550814 | Msa0152640:CDS | 65.0% |
| !! | GGAGGTGACGGTGATGGAGG+AGG | - | chr1_4:15550798-15550817 | Msa0152640:CDS | 65.0% |
| GGTGGAGGAAGGACCTTGGG+TGG | - | chr1_4:15549986-15550005 | Msa0152640:CDS | 65.0% | |
| GGAGGAAGGACCTTGGGTGG+TGG | - | chr1_4:15549989-15550008 | Msa0152640:CDS | 65.0% | |
| ! | GGAAGGACCTTGGGTGGTGG+TGG | - | chr1_4:15549992-15550011 | Msa0152640:CDS | 65.0% |
| GGAGGAGATGGTGAAGGGGG+TGG | - | chr1_4:15550181-15550200 | Msa0152640:intron | 65.0% | |
| GGAGATGGTGAAGGGGGTGG+GGG | - | chr1_4:15550184-15550203 | Msa0152640:intron | 65.0% | |
| GGAGGAGATGGTGAAGGGGG+TGG | - | chr1_4:15550181-15550200 | Msa0152640:intron | 65.0% | |
| GGAGATGGTGAAGGGGGTGG+GGG | - | chr1_4:15550184-15550203 | Msa0152640:intron | 65.0% | |
| GGAGGAGATGGTGAAGGGGG+TGG | - | chr1_4:15550181-15550200 | Msa0152640:intron | 65.0% | |
| GAGGGGATGGTGAGGGTGGT+GGG | - | chr1_4:15550442-15550461 | Msa0152640:intron | 65.0% | |
| AGGGGATGGTGAGGGTGGTG+GGG | - | chr1_4:15550443-15550462 | Msa0152640:intron | 65.0% | |
| !! | GGAGGTGGGGGTGATGGAGA+TGG | - | chr1_4:15550483-15550502 | Msa0152640:intron | 65.0% |
| !! | GGTGGGGGTGATGGAGATGG+TGG | - | chr1_4:15550486-15550505 | Msa0152640:intron | 65.0% |
| !! | GGGGGTGATGGAGATGGTGG+TGG | - | chr1_4:15550489-15550508 | Msa0152640:intron | 65.0% |
| !! | TGGTGGTGGAGGGGAAGGTG+AGG | - | chr1_4:15550530-15550549 | Msa0152640:intron | 65.0% |
| !! | GGTGGTGGAGGGGAAGGTGA+GGG | - | chr1_4:15550531-15550550 | Msa0152640:intron | 65.0% |
| !! | TGGAGGTGGTGGGGAAGGTG+AGG | - | chr1_4:15550674-15550693 | Msa0152640:intron | 65.0% |
| !! | GGAGGTGGTGGGGAAGGTGA+GGG | - | chr1_4:15550675-15550694 | Msa0152640:intron | 65.0% |
| !! | GGTGGTGGAGGTGACGGTGA+TGG | - | chr1_4:15550792-15550811 | Msa0152640:CDS | 65.0% |
| ! | GGTGGAGGTGACGGTGATGG+AGG | - | chr1_4:15550795-15550814 | Msa0152640:CDS | 65.0% |
| !! | GGAGGTGACGGTGATGGAGG+AGG | - | chr1_4:15550798-15550817 | Msa0152640:CDS | 65.0% |
| TGGGGGTGGAGGGGATGGTG+AGG | - | chr1_4:15550434-15550453 | Msa0152640:intron | 70.0% | |
| GGGGGTGGAGGGGATGGTGA+GGG | - | chr1_4:15550435-15550454 | Msa0152640:intron | 70.0% | |
| GGTGGAGGGGATGGTGAGGG+TGG | - | chr1_4:15550438-15550457 | Msa0152640:intron | 70.0% | |
| GGAGGGGATGGTGAGGGTGG+TGG | - | chr1_4:15550441-15550460 | Msa0152640:intron | 70.0% | |
| ! | GGGGATGGTGAGGGTGGTGG+GGG | - | chr1_4:15550444-15550463 | Msa0152640:intron | 70.0% |
| GGTGGAGGGGAAGGTGAGGG+TGG | - | chr1_4:15550534-15550553 | Msa0152640:intron | 70.0% | |
| GGAGGGGAAGGTGAGGGTGG+TGG | - | chr1_4:15550537-15550556 | Msa0152640:intron | 70.0% | |
| ! | GGGGAAGGTGAGGGTGGTGG+AGG | - | chr1_4:15550540-15550559 | Msa0152640:intron | 70.0% |
| TGGTGGGGGTGGGGAAGGTG+AGG | - | chr1_4:15550626-15550645 | Msa0152640:intron | 70.0% | |
| GGTGGGGGTGGGGAAGGTGA+GGG | - | chr1_4:15550627-15550646 | Msa0152640:intron | 70.0% | |
| GGTGGGGAAGGTGAGGGTGG+TGG | - | chr1_4:15550633-15550652 | Msa0152640:intron | 70.0% | |
| ! | GGGGAAGGTGAGGGTGGTGG+TGG | - | chr1_4:15550540-15550559 | Msa0152640:intron | 70.0% |
| !! | GGTGGTGGGGAAGGTGAGGG+TGG | - | chr1_4:15550678-15550697 | Msa0152640:intron | 70.0% |
| GGTGGGGAAGGTGAGGGTGG+TGG | - | chr1_4:15550633-15550652 | Msa0152640:intron | 70.0% | |
| ! | GGGGAAGGTGAGGGTGGTGG+TGG | - | chr1_4:15550540-15550559 | Msa0152640:intron | 70.0% |
| TGGGGGTGGAGGGGATGGTG+AGG | - | chr1_4:15550434-15550453 | Msa0152640:intron | 70.0% | |
| GGGGGTGGAGGGGATGGTGA+GGG | - | chr1_4:15550435-15550454 | Msa0152640:intron | 70.0% | |
| GGTGGAGGGGATGGTGAGGG+TGG | - | chr1_4:15550438-15550457 | Msa0152640:intron | 70.0% | |
| GGAGGGGATGGTGAGGGTGG+TGG | - | chr1_4:15550441-15550460 | Msa0152640:intron | 70.0% | |
| ! | GGGGATGGTGAGGGTGGTGG+GGG | - | chr1_4:15550444-15550463 | Msa0152640:intron | 70.0% |
| GGTGGAGGGGAAGGTGAGGG+TGG | - | chr1_4:15550534-15550553 | Msa0152640:intron | 70.0% | |
| GGAGGGGAAGGTGAGGGTGG+TGG | - | chr1_4:15550537-15550556 | Msa0152640:intron | 70.0% | |
| ! | GGGGAAGGTGAGGGTGGTGG+AGG | - | chr1_4:15550540-15550559 | Msa0152640:intron | 70.0% |
| TGGTGGGGGTGGGGAAGGTG+AGG | - | chr1_4:15550626-15550645 | Msa0152640:intron | 70.0% | |
| GGTGGGGGTGGGGAAGGTGA+GGG | - | chr1_4:15550627-15550646 | Msa0152640:intron | 70.0% | |
| GGTGGGGAAGGTGAGGGTGG+TGG | - | chr1_4:15550633-15550652 | Msa0152640:intron | 70.0% | |
| ! | GGGGAAGGTGAGGGTGGTGG+TGG | - | chr1_4:15550540-15550559 | Msa0152640:intron | 70.0% |
| !! | GGTGGTGGGGAAGGTGAGGG+TGG | - | chr1_4:15550678-15550697 | Msa0152640:intron | 70.0% |
| GGTGGGGAAGGTGAGGGTGG+TGG | - | chr1_4:15550633-15550652 | Msa0152640:intron | 70.0% | |
| ! | GGGGAAGGTGAGGGTGGTGG+TGG | - | chr1_4:15550540-15550559 | Msa0152640:intron | 70.0% |
| GGGGGTGGGGAAGGTGAGGG+TGG | - | chr1_4:15550630-15550649 | Msa0152640:intron | 75.0% | |
| GGGGGTGGGGAAGGTGAGGG+TGG | - | chr1_4:15550630-15550649 | Msa0152640:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 15549921 | 15550822 | 15549921 | ID=Msa0152640;Name=Msa0152640 |
| chr1_4 | mRNA | 15549921 | 15550822 | 15549921 | ID=Msa0152640-mRNA-1;Parent=Msa0152640;Name=Msa0152640-mRNA-1;_AED=0.45;_eAED=0.49;_QI=0|0|0|1|0|0|3|0|195 |
| chr1_4 | exon | 15550712 | 15550822 | 15550712 | ID=Msa0152640-mRNA-1:exon:6059;Parent=Msa0152640-mRNA-1 |
| chr1_4 | exon | 15550197 | 15550427 | 15550197 | ID=Msa0152640-mRNA-1:exon:6058;Parent=Msa0152640-mRNA-1 |
| chr1_4 | exon | 15549921 | 15550163 | 15549921 | ID=Msa0152640-mRNA-1:exon:6057;Parent=Msa0152640-mRNA-1 |
| chr1_4 | CDS | 15550712 | 15550822 | 15550712 | ID=Msa0152640-mRNA-1:cds;Parent=Msa0152640-mRNA-1 |
| chr1_4 | CDS | 15550197 | 15550427 | 15550197 | ID=Msa0152640-mRNA-1:cds;Parent=Msa0152640-mRNA-1 |
| chr1_4 | CDS | 15549921 | 15550163 | 15549921 | ID=Msa0152640-mRNA-1:cds;Parent=Msa0152640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
