Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126520 | XP_013468929.1 | 91.489 | 188 | 12 | 1 | 1 | 188 | 1 | 184 | 3.70e-122 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126520 | sp|Q9ZVQ6|P2B10_ARATH | 43.678 | 174 | 82 | 6 | 21 | 187 | 104 | 268 | 1.83e-40 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126520 | A0A072VMX3 | 91.489 | 188 | 12 | 1 | 1 | 188 | 1 | 184 | 1.77e-122 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0126520 | 0.824362 | 8.410384e-54 | -8.615850e-47 |
| Msa0021090 | Msa0126520 | -0.827799 | 1.281279e-54 | -8.615850e-47 |
| Msa0027580 | Msa0126520 | 0.801937 | 7.112371e-49 | -8.615850e-47 |
| Msa0031510 | Msa0126520 | 0.983189 | 4.555015e-157 | -8.615850e-47 |
| Msa0032260 | Msa0126520 | 0.803578 | 3.260666e-49 | -8.615850e-47 |
| Msa0033880 | Msa0126520 | 0.811074 | 8.396938e-51 | -8.615850e-47 |
| Msa0042280 | Msa0126520 | 0.804976 | 1.668173e-49 | -8.615850e-47 |
| Msa0048180 | Msa0126520 | 0.819902 | 9.101459e-53 | -8.615850e-47 |
| Msa0052350 | Msa0126520 | -0.831657 | 1.474335e-55 | -8.615850e-47 |
| Msa0052610 | Msa0126520 | 0.802798 | 4.728312e-49 | -8.615850e-47 |
| Msa0056270 | Msa0126520 | 0.804804 | 1.811498e-49 | -8.615850e-47 |
| Msa0057610 | Msa0126520 | 0.809877 | 1.522786e-50 | -8.615850e-47 |
| Msa0068020 | Msa0126520 | 0.827532 | 1.485673e-54 | -8.615850e-47 |
| Msa0075340 | Msa0126520 | 0.802176 | 6.352482e-49 | -8.615850e-47 |
| Msa0076040 | Msa0126520 | 0.802829 | 4.658600e-49 | -8.615850e-47 |
| Msa0094950 | Msa0126520 | 0.803859 | 2.850286e-49 | -8.615850e-47 |
| Msa0101180 | Msa0126520 | 0.814300 | 1.653118e-51 | -8.615850e-47 |
| Msa0111330 | Msa0126520 | 0.804316 | 2.289918e-49 | -8.615850e-47 |
| Msa0116130 | Msa0126520 | 0.825372 | 4.860410e-54 | -8.615850e-47 |
| Msa0126520 | Msa0127310 | 0.806778 | 6.972714e-50 | -8.615850e-47 |
| Msa0126520 | Msa0128860 | 0.816655 | 4.944463e-52 | -8.615850e-47 |
| Msa0126520 | Msa0165950 | 0.814373 | 1.592077e-51 | -8.615850e-47 |
| Msa0126520 | Msa0166750 | 0.825006 | 5.931484e-54 | -8.615850e-47 |
| Msa0126520 | Msa0167480 | 0.853820 | 1.855951e-61 | -8.615850e-47 |
| Msa0126520 | Msa0171410 | 0.819997 | 8.656983e-53 | -8.615850e-47 |
| Msa0126520 | Msa0174000 | 0.816062 | 6.712710e-52 | -8.615850e-47 |
| Msa0126520 | Msa0174730 | 0.812162 | 4.869953e-51 | -8.615850e-47 |
| Msa0126520 | Msa0174770 | 0.809673 | 1.684679e-50 | -8.615850e-47 |
| Msa0126520 | Msa0180020 | 0.812564 | 3.979373e-51 | -8.615850e-47 |
| Msa0126520 | Msa0181610 | 0.822497 | 2.295722e-53 | -8.615850e-47 |
| Msa0126520 | Msa0183460 | 0.829510 | 4.943882e-55 | -8.615850e-47 |
| Msa0126520 | Msa0187930 | 0.824875 | 6.369674e-54 | -8.615850e-47 |
| Msa0126520 | Msa0191080 | 0.808230 | 3.429315e-50 | -8.615850e-47 |
| Msa0126520 | Msa0193600 | 0.813651 | 2.297947e-51 | -8.615850e-47 |
| Msa0126520 | Msa0194540 | 0.827664 | 1.381114e-54 | -8.615850e-47 |
| Msa0126520 | Msa0199690 | 0.835509 | 1.610380e-56 | -8.615850e-47 |
| Msa0126520 | Msa0218830 | 0.810548 | 1.091530e-50 | -8.615850e-47 |
| Msa0126520 | Msa0219120 | 0.814863 | 1.240791e-51 | -8.615850e-47 |
| Msa0126520 | Msa0221030 | 0.810719 | 1.002332e-50 | -8.615850e-47 |
| Msa0126520 | Msa0226460 | 0.800365 | 1.491315e-48 | -8.615850e-47 |
| Msa0126520 | Msa0231100 | 0.849172 | 3.835493e-60 | -8.615850e-47 |
| Msa0126520 | Msa0236270 | 0.822753 | 2.001033e-53 | -8.615850e-47 |
| Msa0126520 | Msa0244780 | 0.819331 | 1.228574e-52 | -8.615850e-47 |
| Msa0126520 | Msa0245060 | 0.808428 | 3.111619e-50 | -8.615850e-47 |
| Msa0126520 | Msa0260240 | 0.808964 | 2.390348e-50 | -8.615850e-47 |
| Msa0126520 | Msa0260280 | 0.809138 | 2.194714e-50 | -8.615850e-47 |
| Msa0126520 | Msa0262480 | 0.879221 | 1.487467e-69 | -8.615850e-47 |
| Msa0126520 | Msa0268130 | 0.812178 | 4.831372e-51 | -8.615850e-47 |
| Msa0126520 | Msa0273650 | 0.813375 | 2.642383e-51 | -8.615850e-47 |
| Msa0126520 | Msa0280430 | 0.858629 | 7.224590e-63 | -8.615850e-47 |
| Msa0126520 | Msa0291520 | 0.837602 | 4.719304e-57 | -8.615850e-47 |
| Msa0126520 | Msa0296250 | 0.812234 | 4.697446e-51 | -8.615850e-47 |
| Msa0126520 | Msa0298200 | 0.815496 | 8.973745e-52 | -8.615850e-47 |
| Msa0126520 | Msa0298990 | 0.805800 | 1.120488e-49 | -8.615850e-47 |
| Msa0126520 | Msa0300350 | 0.850216 | 1.960050e-60 | -8.615850e-47 |
| Msa0126520 | Msa0301870 | 0.840628 | 7.754817e-58 | -8.615850e-47 |
| Msa0126520 | Msa0304260 | 0.802471 | 5.522385e-49 | -8.615850e-47 |
| Msa0126520 | Msa0304590 | 0.846505 | 2.082669e-59 | -8.615850e-47 |
| Msa0126520 | Msa0304660 | 0.855503 | 6.038962e-62 | -8.615850e-47 |
| Msa0126520 | Msa0310410 | 0.811913 | 5.517514e-51 | -8.615850e-47 |
| Msa0126520 | Msa0331700 | 0.854735 | 1.009895e-61 | -8.615850e-47 |
| Msa0126520 | Msa0337650 | 0.804439 | 2.159323e-49 | -8.615850e-47 |
| Msa0126520 | Msa0347680 | 0.809370 | 1.956699e-50 | -8.615850e-47 |
| Msa0126520 | Msa0348830 | 0.848634 | 5.409218e-60 | -8.615850e-47 |
| Msa0126520 | Msa0359040 | 0.809977 | 1.449062e-50 | -8.615850e-47 |
| Msa0126520 | Msa0370160 | -0.832393 | 9.698216e-56 | -8.615850e-47 |
| Msa0126520 | Msa0384880 | 0.804457 | 2.140148e-49 | -8.615850e-47 |
| Msa0126520 | Msa0394400 | 0.817129 | 3.869611e-52 | -8.615850e-47 |
| Msa0126520 | Msa0408240 | -0.800750 | 1.245121e-48 | -8.615850e-47 |
| Msa0126520 | Msa0437690 | -0.833543 | 5.020841e-56 | -8.615850e-47 |
| Msa0126520 | Msa0439230 | 0.807864 | 4.104025e-50 | -8.615850e-47 |
| Msa0126520 | Msa0443390 | 0.842051 | 3.273367e-58 | -8.615850e-47 |
| Msa0126520 | Msa0458060 | 0.812784 | 3.561992e-51 | -8.615850e-47 |
| Msa0126520 | Msa0481480 | 0.801583 | 8.407292e-49 | -8.615850e-47 |
| Msa0126520 | Msa0490820 | 0.803628 | 3.184098e-49 | -8.615850e-47 |
| Msa0126520 | Msa0505150 | 0.808119 | 3.621586e-50 | -8.615850e-47 |
| Msa0126520 | Msa0509950 | -0.827350 | 1.642745e-54 | -8.615850e-47 |
| Msa0126520 | Msa0526540 | 0.843282 | 1.541723e-58 | -8.615850e-47 |
| Msa0126520 | Msa0527150 | 0.817178 | 3.772673e-52 | -8.615850e-47 |
| Msa0126520 | Msa0531650 | 0.802473 | 5.517436e-49 | -8.615850e-47 |
| Msa0126520 | Msa0534750 | 0.849583 | 2.946167e-60 | -8.615850e-47 |
| Msa0126520 | Msa0547990 | 0.801192 | 1.011005e-48 | -8.615850e-47 |
| Msa0126520 | Msa0548880 | -0.809557 | 1.784070e-50 | -8.615850e-47 |
| Msa0126520 | Msa0550540 | 0.812831 | 3.478169e-51 | -8.615850e-47 |
| Msa0126520 | Msa0550570 | 0.832675 | 8.257272e-56 | -8.615850e-47 |
| Msa0126520 | Msa0552810 | 0.801899 | 7.243008e-49 | -8.615850e-47 |
| Msa0126520 | Msa0561430 | 0.829588 | 4.734352e-55 | -8.615850e-47 |
| Msa0126520 | Msa0571920 | 0.825303 | 5.045620e-54 | -8.615850e-47 |
| Msa0126520 | Msa0576940 | 0.837118 | 6.276593e-57 | -8.615850e-47 |
| Msa0126520 | Msa0579770 | 0.823558 | 1.298493e-53 | -8.615850e-47 |
| Msa0126520 | Msa0581070 | 0.831879 | 1.299258e-55 | -8.615850e-47 |
| Msa0126520 | Msa0593700 | 0.830144 | 3.464285e-55 | -8.615850e-47 |
| Msa0126520 | Msa0603840 | -0.822583 | 2.191855e-53 | -8.615850e-47 |
| Msa0126520 | Msa0609000 | 0.828633 | 8.066407e-55 | -8.615850e-47 |
| Msa0126520 | Msa0610390 | 0.850272 | 1.889824e-60 | -8.615850e-47 |
| Msa0126520 | Msa0615580 | 0.842943 | 1.898625e-58 | -8.615850e-47 |
| Msa0126520 | Msa0615660 | 0.839472 | 1.552693e-57 | -8.615850e-47 |
| Msa0126520 | Msa0618930 | 0.805798 | 1.121710e-49 | -8.615850e-47 |
| Msa0126520 | Msa0623200 | 0.808867 | 2.507328e-50 | -8.615850e-47 |
| Msa0126520 | Msa0633570 | 0.818868 | 1.566035e-52 | -8.615850e-47 |
| Msa0126520 | Msa0650920 | 0.840367 | 9.073629e-58 | -8.615850e-47 |
| Msa0126520 | Msa0654870 | 0.859682 | 3.492188e-63 | -8.615850e-47 |
| Msa0126520 | Msa0659030 | 0.811487 | 6.830979e-51 | -8.615850e-47 |
| Msa0126520 | Msa0659140 | 0.820546 | 6.478180e-53 | -8.615850e-47 |
| Msa0126520 | Msa0659990 | 0.820055 | 8.393798e-53 | -8.615850e-47 |
| Msa0126520 | Msa0666230 | 0.853833 | 1.839753e-61 | -8.615850e-47 |
| Msa0126520 | Msa0683780 | 0.807088 | 5.994592e-50 | -8.615850e-47 |
| Msa0126520 | Msa0687630 | 0.827265 | 1.721037e-54 | -8.615850e-47 |
| Msa0126520 | Msa0699190 | 0.832290 | 1.028326e-55 | -8.615850e-47 |
| Msa0126520 | Msa0705000 | 0.817913 | 2.576757e-52 | -8.615850e-47 |
| Msa0126520 | Msa0705040 | 0.839097 | 1.942964e-57 | -8.615850e-47 |
| Msa0126520 | Msa0705600 | 0.817381 | 3.396103e-52 | -8.615850e-47 |
| Msa0126520 | Msa0707390 | 0.870614 | 1.277809e-66 | -8.615850e-47 |
| Msa0126520 | Msa0729200 | 0.815000 | 1.156777e-51 | -8.615850e-47 |
| Msa0126520 | Msa0738100 | 0.823136 | 1.629377e-53 | -8.615850e-47 |
| Msa0126520 | Msa0750920 | 0.816877 | 4.408771e-52 | -8.615850e-47 |
| Msa0126520 | Msa0751010 | 0.804841 | 1.779950e-49 | -8.615850e-47 |
| Msa0126520 | Msa0769590 | 0.822883 | 1.866573e-53 | -8.615850e-47 |
| Msa0126520 | Msa0772770 | 0.801642 | 8.177969e-49 | -8.615850e-47 |
| Msa0126520 | Msa0785130 | 0.863227 | 2.892651e-64 | -8.615850e-47 |
| Msa0126520 | Msa0794050 | 0.869864 | 2.248613e-66 | -8.615850e-47 |
| Msa0126520 | Msa0806880 | 0.834518 | 2.860984e-56 | -8.615850e-47 |
| Msa0126520 | Msa0814250 | 0.809861 | 1.534452e-50 | -8.615850e-47 |
| Msa0126520 | Msa0817540 | 0.815079 | 1.111165e-51 | -8.615850e-47 |
| Msa0126520 | Msa0818770 | 0.847750 | 9.491884e-60 | -8.615850e-47 |
| Msa0126520 | Msa0819540 | 0.822323 | 2.519059e-53 | -8.615850e-47 |
| Msa0126520 | Msa0824640 | 0.812207 | 4.761198e-51 | -8.615850e-47 |
| Msa0126520 | Msa0858440 | 0.808257 | 3.384565e-50 | -8.615850e-47 |
| Msa0126520 | Msa0864010 | 0.811392 | 7.164296e-51 | -8.615850e-47 |
| Msa0126520 | Msa0921870 | 0.801581 | 8.415136e-49 | -8.615850e-47 |
| Msa0126520 | Msa0943170 | 0.803966 | 2.709100e-49 | -8.615850e-47 |
| Msa0126520 | Msa0945480 | 0.809876 | 1.523737e-50 | -8.615850e-47 |
| Msa0126520 | Msa0960830 | 0.853952 | 1.700124e-61 | -8.615850e-47 |
| Msa0126520 | Msa0963020 | 0.829747 | 4.329203e-55 | -8.615850e-47 |
| Msa0126520 | Msa0974810 | 0.806824 | 6.818872e-50 | -8.615850e-47 |
| Msa0126520 | Msa0994290 | 0.807345 | 5.289460e-50 | -8.615850e-47 |
| Msa0126520 | Msa1019240 | 0.857726 | 1.341108e-62 | -8.615850e-47 |
| Msa0126520 | Msa1019260 | 0.854002 | 1.644915e-61 | -8.615850e-47 |
| Msa0126520 | Msa1025940 | 0.825971 | 3.504649e-54 | -8.615850e-47 |
| Msa0126520 | Msa1030930 | 0.826308 | 2.913306e-54 | -8.615850e-47 |
| Msa0126520 | Msa1070050 | 0.828787 | 7.404891e-55 | -8.615850e-47 |
| Msa0126520 | Msa1070390 | 0.825321 | 4.995673e-54 | -8.615850e-47 |
| Msa0126520 | Msa1072710 | 0.835019 | 2.140590e-56 | -8.615850e-47 |
| Msa0126520 | Msa1073400 | 0.802575 | 5.256614e-49 | -8.615850e-47 |
| Msa0126520 | Msa1083880 | 0.831394 | 1.711746e-55 | -8.615850e-47 |
| Msa0126520 | Msa1104210 | 0.841986 | 3.405215e-58 | -8.615850e-47 |
| Msa0126520 | Msa1122820 | 0.832774 | 7.801929e-56 | -8.615850e-47 |
| Msa0126520 | Msa1126510 | 0.827058 | 1.928828e-54 | -8.615850e-47 |
| Msa0126520 | Msa1126770 | 0.806947 | 6.422237e-50 | -8.615850e-47 |
| Msa0126520 | Msa1126850 | 0.812971 | 3.241434e-51 | -8.615850e-47 |
| Msa0126520 | Msa1127540 | 0.804368 | 2.233659e-49 | -8.615850e-47 |
| Msa0126520 | Msa1131170 | 0.818535 | 1.863246e-52 | -8.615850e-47 |
| Msa0126520 | Msa1131560 | 0.853783 | 1.902217e-61 | -8.615850e-47 |
| Msa0126520 | Msa1135810 | -0.818584 | 1.816064e-52 | -8.615850e-47 |
| Msa0126520 | Msa1138870 | 0.831481 | 1.628651e-55 | -8.615850e-47 |
| Msa0126520 | Msa1165780 | 0.809115 | 2.219395e-50 | -8.615850e-47 |
| Msa0126520 | Msa1166010 | 0.811426 | 7.042896e-51 | -8.615850e-47 |
| Msa0126520 | Msa1166860 | 0.826666 | 2.393505e-54 | -8.615850e-47 |
| Msa0126520 | Msa1166870 | 0.891132 | 5.249309e-74 | -8.615850e-47 |
| Msa0126520 | Msa1179950 | 0.807457 | 5.007722e-50 | -8.615850e-47 |
| Msa0126520 | Msa1179980 | 0.825845 | 3.752881e-54 | -8.615850e-47 |
| Msa0126520 | Msa1184370 | 0.869810 | 2.342664e-66 | -8.615850e-47 |
| Msa0126520 | Msa1192850 | 0.829631 | 4.620942e-55 | -8.615850e-47 |
| Msa0126520 | Msa1201830 | 0.856134 | 3.950063e-62 | -8.615850e-47 |
| Msa0126520 | Msa1202580 | 0.813025 | 3.153321e-51 | -8.615850e-47 |
| Msa0126520 | Msa1207730 | 0.801106 | 1.053117e-48 | -8.615850e-47 |
| Msa0126520 | Msa1210120 | 0.817320 | 3.505291e-52 | -8.615850e-47 |
| Msa0126520 | Msa1227690 | 0.861291 | 1.137458e-63 | -8.615850e-47 |
| Msa0126520 | Msa1234980 | 0.812553 | 4.001833e-51 | -8.615850e-47 |
| Msa0126520 | Msa1253810 | 0.801750 | 7.770991e-49 | -8.615850e-47 |
| Msa0126520 | Msa1256770 | 0.821139 | 4.732482e-53 | -8.615850e-47 |
| Msa0126520 | Msa1270620 | 0.833137 | 6.336696e-56 | -8.615850e-47 |
| Msa0126520 | Msa1270690 | 0.824897 | 6.293295e-54 | -8.615850e-47 |
| Msa0126520 | Msa1271580 | 0.800341 | 1.507963e-48 | -8.615850e-47 |
| Msa0126520 | Msa1272460 | 0.814937 | 1.194594e-51 | -8.615850e-47 |
| Msa0126520 | Msa1294840 | 0.852891 | 3.428507e-61 | -8.615850e-47 |
| Msa0126520 | Msa1299570 | 0.807798 | 4.239584e-50 | -8.615850e-47 |
| Msa0126520 | Msa1299630 | 0.808498 | 3.007057e-50 | -8.615850e-47 |
| Msa0126520 | Msa1306990 | 0.822346 | 2.488714e-53 | -8.615850e-47 |
| Msa0126520 | Msa1307950 | 0.804465 | 2.132399e-49 | -8.615850e-47 |
| Msa0126520 | Msa1310690 | 0.843694 | 1.197176e-58 | -8.615850e-47 |
| Msa0126520 | Msa1316680 | 0.806447 | 8.189712e-50 | -8.615850e-47 |
| Msa0126520 | Msa1327490 | 0.823030 | 1.724727e-53 | -8.615850e-47 |
| Msa0126520 | Msa1329540 | 0.805069 | 1.594472e-49 | -8.615850e-47 |
| Msa0126520 | Msa1331710 | 0.819219 | 1.302593e-52 | -8.615850e-47 |
| Msa0126520 | Msa1344850 | 0.830908 | 2.252837e-55 | -8.615850e-47 |
| Msa0126520 | Msa1345450 | 0.811400 | 7.133506e-51 | -8.615850e-47 |
| Msa0126520 | Msa1349570 | 0.874239 | 7.888643e-68 | -8.615850e-47 |
| Msa0126520 | Msa1358430 | 0.802242 | 6.156540e-49 | -8.615850e-47 |
| Msa0126520 | Msa1359270 | 0.801657 | 8.121207e-49 | -8.615850e-47 |
| Msa0126520 | Msa1363330 | 0.837543 | 4.885360e-57 | -8.615850e-47 |
| Msa0126520 | Msa1363860 | 0.822771 | 1.982210e-53 | -8.615850e-47 |
| Msa0126520 | Msa1369190 | 0.857260 | 1.842356e-62 | -8.615850e-47 |
| Msa0126520 | Msa1372310 | 0.813770 | 2.163393e-51 | -8.615850e-47 |
| Msa0126520 | Msa1379760 | 0.825720 | 4.018034e-54 | -8.615850e-47 |
| Msa0126520 | Msa1380970 | 0.815344 | 9.698711e-52 | -8.615850e-47 |
| Msa0126520 | Msa1386600 | 0.836821 | 7.472671e-57 | -8.615850e-47 |
| Msa0126520 | Msa1397940 | 0.819419 | 1.173111e-52 | -8.615850e-47 |
| Msa0126520 | Msa1404190 | 0.830735 | 2.484082e-55 | -8.615850e-47 |
| Msa0126520 | Msa1413500 | 0.828583 | 8.292807e-55 | -8.615850e-47 |
| Msa0126520 | Msa1417550 | 0.805405 | 1.356218e-49 | -8.615850e-47 |
| Msa0126520 | Msa1418960 | -0.834711 | 2.559956e-56 | -8.615850e-47 |
| Msa0126520 | Msa1427560 | 0.839084 | 1.957619e-57 | -8.615850e-47 |
| Msa0126520 | Msa1438640 | 0.822428 | 2.381646e-53 | -8.615850e-47 |
| Msa0126520 | Msa1442850 | 0.835791 | 1.365698e-56 | -8.615850e-47 |
| Msa0126520 | Msa1450280 | 0.874207 | 8.087262e-68 | -8.615850e-47 |
| Msa0126520 | Msa1461490 | 0.804739 | 1.869736e-49 | -8.615850e-47 |
| Msa0126520 | Msa1461570 | 0.823722 | 1.188493e-53 | -8.615850e-47 |
| Msa0126520 | Msa1462860 | 0.837960 | 3.818208e-57 | -8.615850e-47 |
| Msa0126520 | Msa1465080 | 0.829211 | 5.843903e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126520 | MtrunA17_Chr1g0189541 | 91.489 | 188 | 12 | 1 | 1 | 188 | 1 | 184 | 3.40e-126 | 352 |
| Msa0126520 | MtrunA17_Chr1g0189611 | 82.081 | 173 | 27 | 3 | 17 | 188 | 96 | 265 | 8.25e-99 | 286 |
| Msa0126520 | MtrunA17_Chr1g0189721 | 69.730 | 185 | 47 | 4 | 11 | 188 | 83 | 265 | 3.68e-85 | 252 |
| Msa0126520 | MtrunA17_Chr1g0189751 | 68.984 | 187 | 45 | 5 | 11 | 188 | 83 | 265 | 1.05e-82 | 246 |
| Msa0126520 | MtrunA17_Chr1g0189621 | 71.751 | 177 | 41 | 4 | 17 | 188 | 92 | 264 | 2.97e-81 | 242 |
| Msa0126520 | MtrunA17_Chr1g0189821 | 67.614 | 176 | 50 | 3 | 16 | 188 | 95 | 266 | 1.35e-77 | 233 |
| Msa0126520 | MtrunA17_Chr1g0203281 | 62.963 | 189 | 62 | 2 | 8 | 188 | 84 | 272 | 1.49e-77 | 233 |
| Msa0126520 | MtrunA17_Chr1g0189671 | 62.431 | 181 | 60 | 4 | 16 | 188 | 92 | 272 | 2.22e-71 | 217 |
| Msa0126520 | MtrunA17_Chr1g0203331 | 63.690 | 168 | 51 | 3 | 17 | 174 | 78 | 245 | 4.22e-67 | 205 |
| Msa0126520 | MtrunA17_Chr1g0189641 | 59.341 | 182 | 65 | 3 | 16 | 188 | 92 | 273 | 3.49e-65 | 201 |
| Msa0126520 | MtrunA17_Chr1g0189651 | 63.006 | 173 | 52 | 4 | 17 | 188 | 18 | 179 | 5.71e-64 | 195 |
| Msa0126520 | MtrunA17_Chr1g0190071 | 57.838 | 185 | 65 | 3 | 17 | 188 | 97 | 281 | 2.24e-63 | 197 |
| Msa0126520 | MtrunA17_Chr1g0157451 | 56.383 | 188 | 66 | 6 | 17 | 188 | 96 | 283 | 6.21e-59 | 186 |
| Msa0126520 | MtrunA17_Chr1g0189661 | 55.729 | 192 | 74 | 5 | 8 | 188 | 87 | 278 | 3.01e-57 | 182 |
| Msa0126520 | MtrunA17_Chr3g0097191 | 57.386 | 176 | 68 | 4 | 16 | 188 | 96 | 267 | 3.20e-56 | 178 |
| Msa0126520 | MtrunA17_Chr7g0260801 | 54.286 | 175 | 70 | 4 | 17 | 188 | 107 | 274 | 1.13e-53 | 172 |
| Msa0126520 | MtrunA17_Chr1g0189781 | 53.631 | 179 | 72 | 5 | 16 | 188 | 100 | 273 | 2.29e-50 | 163 |
| Msa0126520 | MtrunA17_Chr2g0317291 | 54.070 | 172 | 74 | 3 | 17 | 185 | 43 | 212 | 2.37e-49 | 159 |
| Msa0126520 | MtrunA17_Chr1g0188311 | 62.687 | 134 | 35 | 2 | 52 | 170 | 22 | 155 | 3.66e-49 | 156 |
| Msa0126520 | MtrunA17_Chr3g0078331 | 49.048 | 210 | 72 | 5 | 14 | 188 | 106 | 315 | 4.20e-47 | 156 |
| Msa0126520 | MtrunA17_Chr3g0095261 | 48.969 | 194 | 72 | 6 | 16 | 188 | 96 | 283 | 1.33e-44 | 149 |
| Msa0126520 | MtrunA17_Chr7g0272091 | 45.055 | 182 | 86 | 5 | 21 | 188 | 102 | 283 | 4.92e-40 | 137 |
| Msa0126520 | MtrunA17_Chr1g0189711 | 44.724 | 199 | 94 | 8 | 2 | 188 | 81 | 275 | 9.10e-40 | 136 |
| Msa0126520 | MtrunA17_Chr1g0189591 | 43.147 | 197 | 83 | 5 | 21 | 188 | 110 | 306 | 5.41e-39 | 135 |
| Msa0126520 | MtrunA17_Chr1g0189571 | 42.487 | 193 | 86 | 5 | 21 | 188 | 13 | 205 | 1.02e-38 | 132 |
| Msa0126520 | MtrunA17_Chr3g0102081 | 59.048 | 105 | 39 | 1 | 51 | 155 | 23 | 123 | 1.68e-36 | 123 |
| Msa0126520 | MtrunA17_Chr1g0189701 | 43.137 | 204 | 91 | 8 | 5 | 188 | 119 | 317 | 8.73e-34 | 122 |
| Msa0126520 | MtrunA17_Chr1g0192371 | 40.782 | 179 | 94 | 4 | 21 | 188 | 104 | 281 | 1.56e-33 | 120 |
| Msa0126520 | MtrunA17_Chr1g0189631 | 60.417 | 96 | 28 | 1 | 70 | 155 | 2 | 97 | 2.98e-32 | 112 |
| Msa0126520 | MtrunA17_Chr3g0143881 | 49.587 | 121 | 44 | 4 | 70 | 188 | 2 | 107 | 6.21e-28 | 101 |
| Msa0126520 | MtrunA17_Chr7g0272101 | 39.053 | 169 | 89 | 6 | 25 | 188 | 98 | 257 | 8.62e-27 | 102 |
| Msa0126520 | MtrunA17_Chr7g0260811 | 52.688 | 93 | 42 | 1 | 17 | 109 | 72 | 162 | 2.15e-23 | 91.3 |
| Msa0126520 | MtrunA17_Chr4g0043591 | 28.283 | 198 | 111 | 6 | 1 | 188 | 114 | 290 | 7.11e-18 | 79.3 |
| Msa0126520 | MtrunA17_Chr4g0010881 | 35.329 | 167 | 76 | 6 | 26 | 188 | 99 | 237 | 1.20e-17 | 77.8 |
| Msa0126520 | MtrunA17_Chr1g0189771 | 50.704 | 71 | 35 | 0 | 16 | 86 | 104 | 174 | 1.37e-16 | 73.6 |
| Msa0126520 | MtrunA17_Chr1g0189761 | 50.549 | 91 | 39 | 3 | 101 | 188 | 7 | 94 | 1.75e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126520 | AT2G02360.1 | 43.678 | 174 | 82 | 6 | 21 | 187 | 104 | 268 | 1.86e-41 | 141 |
| Msa0126520 | AT1G09155.1 | 41.489 | 188 | 90 | 6 | 21 | 188 | 93 | 280 | 4.32e-36 | 127 |
| Msa0126520 | AT1G80110.1 | 40.341 | 176 | 95 | 6 | 16 | 187 | 86 | 255 | 4.24e-34 | 121 |
| Msa0126520 | AT2G02340.1 | 40.678 | 177 | 92 | 6 | 21 | 187 | 128 | 301 | 7.09e-33 | 119 |
| Msa0126520 | AT2G02240.1 | 37.059 | 170 | 100 | 3 | 21 | 187 | 151 | 316 | 7.47e-33 | 120 |
| Msa0126520 | AT1G56240.1 | 40.642 | 187 | 91 | 7 | 21 | 187 | 94 | 280 | 5.00e-32 | 117 |
| Msa0126520 | AT1G56250.1 | 40.957 | 188 | 91 | 7 | 21 | 188 | 94 | 281 | 1.04e-31 | 116 |
| Msa0126520 | AT2G02250.1 | 37.288 | 177 | 101 | 5 | 16 | 187 | 132 | 303 | 1.17e-31 | 116 |
| Msa0126520 | AT2G02230.1 | 32.075 | 212 | 100 | 6 | 21 | 188 | 122 | 333 | 3.13e-26 | 102 |
| Msa0126520 | AT2G02300.1 | 33.500 | 200 | 99 | 5 | 1 | 188 | 104 | 281 | 6.51e-26 | 100 |
| Msa0126520 | AT2G02350.1 | 35.057 | 174 | 93 | 7 | 25 | 187 | 1 | 165 | 5.54e-23 | 90.9 |
| Msa0126520 | AT2G02350.2 | 34.831 | 178 | 96 | 7 | 21 | 187 | 114 | 282 | 2.02e-22 | 92.0 |
| Msa0126520 | AT2G02310.1 | 32.000 | 175 | 107 | 5 | 21 | 188 | 135 | 304 | 5.39e-22 | 90.9 |
| Msa0126520 | AT2G02320.1 | 35.593 | 177 | 96 | 8 | 21 | 187 | 130 | 298 | 2.67e-19 | 83.6 |
| Msa0126520 | AT1G33920.1 | 28.655 | 171 | 96 | 5 | 25 | 188 | 13 | 164 | 5.81e-17 | 74.7 |
| Msa0126520 | AT2G26820.3 | 28.646 | 192 | 104 | 8 | 10 | 187 | 305 | 477 | 7.99e-15 | 72.0 |
| Msa0126520 | AT2G26820.1 | 27.807 | 187 | 106 | 7 | 11 | 187 | 294 | 461 | 5.77e-14 | 69.7 |
| Msa0126520 | AT4G19840.1 | 27.273 | 176 | 104 | 5 | 18 | 188 | 89 | 245 | 1.11e-12 | 64.7 |
| Msa0126520 | AT3G53000.1 | 26.667 | 180 | 102 | 7 | 25 | 187 | 118 | 284 | 2.41e-11 | 61.6 |
| Msa0126520 | AT2G26820.4 | 36.250 | 80 | 43 | 2 | 10 | 81 | 305 | 384 | 4.82e-11 | 60.8 |
Find 69 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGCTGCATATTGAGTATT+TGG | 0.137691 | 1_3:+55615091 | None:intergenic |
| GTTCATGGAATGTTGCTTAA+TGG | 0.277473 | 1_3:+55614750 | None:intergenic |
| TCCACTTCCACTTCCACATT+TGG | 0.287872 | 1_3:+55614962 | None:intergenic |
| TCAAGAAGTTGAGCAACTTC+AGG | 0.327041 | 1_3:+55615163 | None:intergenic |
| AAGCTGCATATTGAGTATTT+GGG | 0.339648 | 1_3:+55615092 | None:intergenic |
| TTCTCAAGCATTAGTTAGTC+AGG | 0.370971 | 1_3:-55617763 | Msa0126520:five_prime_UTR |
| GGGTGGTTGGAGATTGAAAT+GGG | 0.384436 | 1_3:-55614884 | Msa0126520:CDS |
| TTGTTGAAGGAATAGAAGTT+AGG | 0.389505 | 1_3:-55614784 | Msa0126520:CDS |
| TAGATCTCTCAGCATTGCTT+GGG | 0.393802 | 1_3:-55617464 | Msa0126520:CDS |
| CCAGGCTGGCATCTTCATCT+TGG | 0.395065 | 1_3:-55617706 | Msa0126520:five_prime_UTR |
| CTAGATCTCTCAGCATTGCT+TGG | 0.399764 | 1_3:-55617465 | Msa0126520:CDS |
| TATGCAAGGGGTCTTGTGTT+TGG | 0.410627 | 1_3:-55614727 | Msa0126520:three_prime_UTR |
| AGGACAGTTCTGAAATCCTT+TGG | 0.419572 | 1_3:+55615045 | None:intergenic |
| ATGATAAGCGCTATTGGAAC+TGG | 0.419916 | 1_3:-55617438 | Msa0126520:CDS |
| TAGTACTAAAATTGTCTGTT+TGG | 0.420764 | 1_3:-55614987 | Msa0126520:CDS |
| AAGACCCCTTGCATAGTTCA+TGG | 0.424562 | 1_3:+55614735 | None:intergenic |
| ATGTTAAGGAGCTACATCTT+TGG | 0.426392 | 1_3:-55614820 | Msa0126520:CDS |
| TAGTCCGTACACGCGTAGTA+CGG | 0.428915 | 1_3:+55617799 | None:intergenic |
| ACACCAACTGATAACTCTAT+AGG | 0.434068 | 1_3:+55615025 | None:intergenic |
| GTTGCTTAATGGTCTTACTT+AGG | 0.436928 | 1_3:+55614761 | None:intergenic |
| AAGAGTGGTCTCTTTGTTGA+AGG | 0.440904 | 1_3:-55614797 | Msa0126520:CDS |
| CAGGTCAATATTTAAAAGAC+TGG | 0.441866 | 1_3:-55617744 | Msa0126520:five_prime_UTR |
| GGGGTGATGATAAGCGCTAT+TGG | 0.442255 | 1_3:-55617444 | Msa0126520:CDS |
| GAGTATTTGGGGACAAGCTA+AGG | 0.444858 | 1_3:+55615104 | None:intergenic |
| CTCAACTTCTTGAAGTGTGG+TGG | 0.449215 | 1_3:-55615153 | Msa0126520:CDS |
| TTCAATTCAGGCTTAGAAGA+TGG | 0.449517 | 1_3:-55614857 | Msa0126520:CDS |
| ATCTAAGCTAACCTGGAGTC+AGG | 0.456040 | 1_3:+55617406 | None:intergenic |
| CAGGCTGGCATCTTCATCTT+GGG | 0.461205 | 1_3:-55617705 | Msa0126520:five_prime_UTR |
| TGGGTGGTTGGAGATTGAAA+TGG | 0.464905 | 1_3:-55614885 | Msa0126520:CDS |
| CAAGAAGTTGAGCAACTTCA+GGG | 0.466659 | 1_3:+55615164 | None:intergenic |
| CGTCCTAGTGTGAGAAGCGA+TGG | 0.485861 | 1_3:-55614905 | Msa0126520:CDS |
| AGTCCGTACACGCGTAGTAC+GGG | 0.492193 | 1_3:+55617800 | None:intergenic |
| TGGAAGTGGAAGTGGAAGGT+AGG | 0.493027 | 1_3:-55614955 | Msa0126520:CDS |
| GTAGCTCCTTAACATTCATC+AGG | 0.499214 | 1_3:+55614828 | None:intergenic |
| AGACGTCCTGATGAATGTTA+AGG | 0.504428 | 1_3:-55614834 | Msa0126520:CDS |
| TCCAAATGTGGAAGTGGAAG+TGG | 0.508630 | 1_3:-55614963 | Msa0126520:CDS |
| CCAAGATGAAGATGCCAGCC+TGG | 0.514901 | 1_3:+55617706 | None:intergenic |
| AGACAGTTCCGAGCATCAAA+AGG | 0.515262 | 1_3:-55617652 | Msa0126520:intron |
| TCACCCGTACTACGCGTGTA+CGG | 0.518085 | 1_3:-55617803 | Msa0126520:five_prime_UTR |
| GCAAGGGGTCTTGTGTTTGG+TGG | 0.519713 | 1_3:-55614724 | Msa0126520:three_prime_UTR |
| AACATTCCATGAACTATGCA+AGG | 0.537468 | 1_3:-55614741 | Msa0126520:three_prime_UTR |
| AGGCAGCATGACAGAGCAGT+AGG | 0.538263 | 1_3:-55614935 | Msa0126520:CDS |
| CACCCATCGCTTCTCACACT+AGG | 0.543006 | 1_3:+55614902 | None:intergenic |
| GAGTTATCAGTTGGTGTCGA+AGG | 0.545216 | 1_3:-55615019 | Msa0126520:CDS |
| GTGTGGTGGCTTGATATTAG+TGG | 0.549830 | 1_3:-55615139 | Msa0126520:CDS |
| TCTTCATCTTGGGATACCTA+AGG | 0.562627 | 1_3:-55617695 | Msa0126520:five_prime_UTR |
| TTTGGATCCAAATGTGGAAG+TGG | 0.569537 | 1_3:-55614969 | Msa0126520:CDS |
| GGATTAATATGCCTGACTCC+AGG | 0.571055 | 1_3:-55617417 | Msa0126520:intron |
| TGTGAGAAGCGATGGGTGGT+TGG | 0.576323 | 1_3:-55614897 | Msa0126520:CDS |
| TCTTATCTATTGTACCAGGC+TGG | 0.581291 | 1_3:-55617720 | Msa0126520:five_prime_UTR |
| AGTATTTGGGGACAAGCTAA+GGG | 0.583185 | 1_3:+55615105 | None:intergenic |
| TTGCTCAACTTCTTGAAGTG+TGG | 0.594620 | 1_3:-55615156 | Msa0126520:CDS |
| AGCTGCATATTGAGTATTTG+GGG | 0.601395 | 1_3:+55615093 | None:intergenic |
| AGATCTCTCAGCATTGCTTG+GGG | 0.605794 | 1_3:-55617463 | Msa0126520:CDS |
| TTATCAGTTGGTGTCGAAGG+TGG | 0.607167 | 1_3:-55615016 | Msa0126520:CDS |
| GAGCTACATCTTTGGAAGAG+TGG | 0.609596 | 1_3:-55614812 | Msa0126520:CDS |
| TTGGGATACCTAAGGATGTG+TGG | 0.610104 | 1_3:-55617687 | Msa0126520:exon |
| ACATTCCATGAACTATGCAA+GGG | 0.611864 | 1_3:-55614740 | Msa0126520:three_prime_UTR |
| TGGATCTTATCTATTGTACC+AGG | 0.612655 | 1_3:-55617724 | Msa0126520:five_prime_UTR |
| GTGGTTGGAGATTGAAATGG+GGG | 0.620504 | 1_3:-55614882 | Msa0126520:CDS |
| TGTCTGTTTGGATCCAAATG+TGG | 0.625217 | 1_3:-55614975 | Msa0126520:CDS |
| TGTCCTATAGAGTTATCAGT+TGG | 0.629309 | 1_3:-55615028 | Msa0126520:CDS |
| GTCCTAGTGTGAGAAGCGAT+GGG | 0.643186 | 1_3:-55614904 | Msa0126520:CDS |
| GGTGGTTGGAGATTGAAATG+GGG | 0.648046 | 1_3:-55614883 | Msa0126520:CDS |
| TGTGGTGGCTTGATATTAGT+GGG | 0.653180 | 1_3:-55615138 | Msa0126520:CDS |
| TTCAAGATGATTGATGCCAA+AGG | 0.654531 | 1_3:-55615061 | Msa0126520:CDS |
| CATTCCATGAACTATGCAAG+GGG | 0.678010 | 1_3:-55614739 | Msa0126520:three_prime_UTR |
| CTAGTGTGAGAAGCGATGGG+TGG | 0.709944 | 1_3:-55614901 | Msa0126520:CDS |
| AATGTGGAAGTGGAAGTGGA+AGG | 0.722814 | 1_3:-55614959 | Msa0126520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATAAATAAAATTAAAGT+TGG | - | chr1_3:55615816-55615835 | Msa0126520:intron | 10.0% |
| !! | TATTATGTCATATATGAATT+CGG | + | chr1_3:55615319-55615338 | None:intergenic | 15.0% |
| !!! | AATTTTTACGAATAAAAAAG+AGG | - | chr1_3:55615748-55615767 | Msa0126520:intron | 15.0% |
| !!! | ATTATTTTTTACACCATTTT+TGG | + | chr1_3:55615784-55615803 | None:intergenic | 15.0% |
| !! | GGTGTAAAAAATAATAAAAA+TGG | - | chr1_3:55615789-55615808 | Msa0126520:intron | 15.0% |
| !!! | AGTAAATAAAATAATGGAAT+GGG | + | chr1_3:55616727-55616746 | None:intergenic | 15.0% |
| !! | TTAAGTTAATCAAGACATAT+TGG | + | chr1_3:55615158-55615177 | None:intergenic | 20.0% |
| !! | CAAAAAAATCTTAACTAACT+TGG | + | chr1_3:55615222-55615241 | None:intergenic | 20.0% |
| !! | ATTATGTCATATATGAATTC+GGG | + | chr1_3:55615318-55615337 | None:intergenic | 20.0% |
| !! | GTCATAAATAGAAATAAAAG+AGG | - | chr1_3:55615351-55615370 | Msa0126520:intron | 20.0% |
| !! | ATGACGTGTTAAATAAAATT+AGG | - | chr1_3:55615433-55615452 | Msa0126520:intron | 20.0% |
| !! | ATCAAAGAGTTAAAAAAACA+AGG | - | chr1_3:55615925-55615944 | Msa0126520:intron | 20.0% |
| !! | TCAAAGAGTTAAAAAAACAA+GGG | - | chr1_3:55615926-55615945 | Msa0126520:intron | 20.0% |
| !!! | TTTTAATTTTTGAAGCATGA+TGG | + | chr1_3:55616088-55616107 | None:intergenic | 20.0% |
| !! | CAATGAAAAATATATAGGAT+TGG | + | chr1_3:55616512-55616531 | None:intergenic | 20.0% |
| !! | TGATGCAATGAAAAATATAT+AGG | + | chr1_3:55616517-55616536 | None:intergenic | 20.0% |
| !!! | GAGTAAATAAAATAATGGAA+TGG | + | chr1_3:55616728-55616747 | None:intergenic | 20.0% |
| !! | GTACTGAGTAAATAAAATAA+TGG | + | chr1_3:55616733-55616752 | None:intergenic | 20.0% |
| !! | TAATAATACCTTTTGATGCT+CGG | + | chr1_3:55614845-55614864 | None:intergenic | 25.0% |
| ! | TTAACTAACTTGGTTCATAA+AGG | + | chr1_3:55615212-55615231 | None:intergenic | 25.0% |
| ! | ACGTGTTAAATAAAATTAGG+AGG | - | chr1_3:55615436-55615455 | Msa0126520:intron | 25.0% |
| ! | GTCCAAATTTAATCACTAAA+GGG | - | chr1_3:55615879-55615898 | Msa0126520:intron | 25.0% |
| ! | AACCCTTTAGTGATTAAATT+TGG | + | chr1_3:55615884-55615903 | None:intergenic | 25.0% |
| !!! | GTATTTTAGTTTGTGAGATT+TGG | + | chr1_3:55616124-55616143 | None:intergenic | 25.0% |
| !! | AACTAAAATACCATTTTGCT+TGG | - | chr1_3:55616133-55616152 | Msa0126520:intron | 25.0% |
| !!! | CGTAATCATAGTTTCTTTTT+TGG | - | chr1_3:55616468-55616487 | Msa0126520:intron | 25.0% |
| !!! | GGACGCAAATTTTAAAAATT+TGG | + | chr1_3:55616545-55616564 | None:intergenic | 25.0% |
| ! | TAAGGTAACAAACAACAAAT+TGG | + | chr1_3:55616566-55616585 | None:intergenic | 25.0% |
| ! | AAAAACAAATTGTGCAAAGT+CGG | + | chr1_3:55616648-55616667 | None:intergenic | 25.0% |
| ! | TAAGTTATAAACGCTGTTAT+AGG | + | chr1_3:55617145-55617164 | None:intergenic | 25.0% |
| ! | AGCGTTTATAACTTATTAAC+TGG | - | chr1_3:55617150-55617169 | Msa0126520:intron | 25.0% |
| ! | GCGTTTATAACTTATTAACT+GGG | - | chr1_3:55617151-55617170 | Msa0126520:intron | 25.0% |
| ! | TTATAACTTATTAACTGGGT+AGG | - | chr1_3:55617155-55617174 | Msa0126520:intron | 25.0% |
| ! | TAGTACTAAAATTGTCTGTT+TGG | - | chr1_3:55617499-55617518 | Msa0126520:CDS | 25.0% |
| CAGGTCAATATTTAAAAGAC+TGG | - | chr1_3:55614742-55614761 | Msa0126520:three_prime_UTR | 30.0% | |
| TTAGAATGCTAATAAAGCCT+TGG | - | chr1_3:55614942-55614961 | Msa0126520:CDS | 30.0% | |
| TTATTTAACACGTCATTGTC+AGG | + | chr1_3:55615429-55615448 | None:intergenic | 30.0% | |
| GGTCCAAATTTAATCACTAA+AGG | - | chr1_3:55615878-55615897 | Msa0126520:intron | 30.0% | |
| ! | ACTCTTTGATTTAGATCTTG+TGG | + | chr1_3:55615915-55615934 | None:intergenic | 30.0% |
| AACTTGGATGGAAAATAGAT+GGG | + | chr1_3:55616411-55616430 | None:intergenic | 30.0% | |
| ! | ATCTATTTTCCATCCAAGTT+GGG | - | chr1_3:55616411-55616430 | Msa0126520:intron | 30.0% |
| ! | ACTATGATTACGAAGCATTA+CGG | + | chr1_3:55616460-55616479 | None:intergenic | 30.0% |
| ACAATACTGAGGCTTAAAAT+AGG | + | chr1_3:55616606-55616625 | None:intergenic | 30.0% | |
| ATCAATATGAACTTGAACGA+AGG | + | chr1_3:55616675-55616694 | None:intergenic | 30.0% | |
| TACTCAGTACTTCATTACTT+TGG | - | chr1_3:55616743-55616762 | Msa0126520:intron | 30.0% | |
| TAACAGACTATATCAAGATG+AGG | + | chr1_3:55616826-55616845 | None:intergenic | 30.0% | |
| TATCTGCTCAGATATTTGAA+AGG | - | chr1_3:55616844-55616863 | Msa0126520:intron | 30.0% | |
| AGTGAATTCCTAAGAAAACA+TGG | + | chr1_3:55617008-55617027 | None:intergenic | 30.0% | |
| AGGAAAAGATATAACAGCAA+AGG | + | chr1_3:55617125-55617144 | None:intergenic | 30.0% | |
| AAGCTGCATATTGAGTATTT+GGG | + | chr1_3:55617397-55617416 | None:intergenic | 30.0% | |
| TAAGCTGCATATTGAGTATT+TGG | + | chr1_3:55617398-55617417 | None:intergenic | 30.0% | |
| !! | AGACAATTTTAGTACTACTC+TGG | + | chr1_3:55617496-55617515 | None:intergenic | 30.0% |
| TTGTTGAAGGAATAGAAGTT+AGG | - | chr1_3:55617702-55617721 | Msa0126520:five_prime_UTR | 30.0% | |
| TTCTCAAGCATTAGTTAGTC+AGG | - | chr1_3:55614723-55614742 | Msa0126520:three_prime_UTR | 35.0% | |
| TGGATCTTATCTATTGTACC+AGG | - | chr1_3:55614762-55614781 | Msa0126520:exon | 35.0% | |
| TGAAAAATCCACACATCCTT+AGG | + | chr1_3:55614810-55614829 | None:intergenic | 35.0% | |
| !! | AGGATGTGTGGATTTTTCAA+AGG | - | chr1_3:55614811-55614830 | Msa0126520:CDS | 35.0% |
| ATGAGAGAAATCAGCAGTTT+AGG | + | chr1_3:55614877-55614896 | None:intergenic | 35.0% | |
| ACTTAAGATCTAAGCTAACC+TGG | + | chr1_3:55615090-55615109 | None:intergenic | 35.0% | |
| GTTAATCAAGACATATTGGC+TGG | + | chr1_3:55615154-55615173 | None:intergenic | 35.0% | |
| !! | ACCGTTTTGTTGAAGTACAA+GGG | + | chr1_3:55615468-55615487 | None:intergenic | 35.0% |
| ! | AGGCATTAAAGTGCCAAAAA+TGG | - | chr1_3:55615768-55615787 | Msa0126520:intron | 35.0% |
| ! | AAAATTAAAGTTGGCTCAGC+TGG | - | chr1_3:55615825-55615844 | Msa0126520:intron | 35.0% |
| ATGGACCAATTGATGTATCA+AGG | - | chr1_3:55615855-55615874 | Msa0126520:intron | 35.0% | |
| TGGACCAATTGATGTATCAA+GGG | - | chr1_3:55615856-55615875 | Msa0126520:intron | 35.0% | |
| ! | AAGGGTGCAGATATGAAAAA+AGG | - | chr1_3:55615944-55615963 | Msa0126520:intron | 35.0% |
| AGGGTGCAGATATGAAAAAA+GGG | - | chr1_3:55615945-55615964 | Msa0126520:intron | 35.0% | |
| ! | TTGTTGTTCAACGTGAAGAA+AGG | + | chr1_3:55616055-55616074 | None:intergenic | 35.0% |
| CAACTTGGATGGAAAATAGA+TGG | + | chr1_3:55616412-55616431 | None:intergenic | 35.0% | |
| ! | CATCTATTTTCCATCCAAGT+TGG | - | chr1_3:55616410-55616429 | Msa0126520:intron | 35.0% |
| GAACTGTGTCTTTAGTTGTA+AGG | + | chr1_3:55616584-55616603 | None:intergenic | 35.0% | |
| GAACATGTGTAACAATACTG+AGG | + | chr1_3:55616617-55616636 | None:intergenic | 35.0% | |
| ! | TTTGAGGAAGACTTTGAAGA+CGG | - | chr1_3:55616779-55616798 | Msa0126520:intron | 35.0% |
| ! | AGATATTTGAAAGGCACACA+TGG | - | chr1_3:55616853-55616872 | Msa0126520:intron | 35.0% |
| ! | TACCAAAGCCATGTTTTCTT+AGG | - | chr1_3:55616997-55617016 | Msa0126520:intron | 35.0% |
| TTCCTAAGAAAACATGGCTT+TGG | + | chr1_3:55617002-55617021 | None:intergenic | 35.0% | |
| ACATCTAACAGTAGATTGCT+TGG | + | chr1_3:55617044-55617063 | None:intergenic | 35.0% | |
| CTAAGGGTTGAAAGAGTTAA+AGG | - | chr1_3:55617181-55617200 | Msa0126520:intron | 35.0% | |
| AGCTGCATATTGAGTATTTG+GGG | + | chr1_3:55617396-55617415 | None:intergenic | 35.0% | |
| TTCAAGATGATTGATGCCAA+AGG | - | chr1_3:55617425-55617444 | Msa0126520:CDS | 35.0% | |
| TGTCCTATAGAGTTATCAGT+TGG | - | chr1_3:55617458-55617477 | Msa0126520:CDS | 35.0% | |
| ACACCAACTGATAACTCTAT+AGG | + | chr1_3:55617464-55617483 | None:intergenic | 35.0% | |
| TTCAATTCAGGCTTAGAAGA+TGG | - | chr1_3:55617629-55617648 | Msa0126520:intron | 35.0% | |
| ATGTTAAGGAGCTACATCTT+TGG | - | chr1_3:55617666-55617685 | Msa0126520:CDS | 35.0% | |
| ! | GTTGCTTAATGGTCTTACTT+AGG | + | chr1_3:55617728-55617747 | None:intergenic | 35.0% |
| ! | GTTCATGGAATGTTGCTTAA+TGG | + | chr1_3:55617739-55617758 | None:intergenic | 35.0% |
| AACATTCCATGAACTATGCA+AGG | - | chr1_3:55617745-55617764 | Msa0126520:five_prime_UTR | 35.0% | |
| ACATTCCATGAACTATGCAA+GGG | - | chr1_3:55617746-55617765 | Msa0126520:five_prime_UTR | 35.0% | |
| TCTTATCTATTGTACCAGGC+TGG | - | chr1_3:55614766-55614785 | Msa0126520:exon | 40.0% | |
| TCTTCATCTTGGGATACCTA+AGG | - | chr1_3:55614791-55614810 | Msa0126520:CDS | 40.0% | |
| GCTGCATTTCAAGATATCCA+AGG | + | chr1_3:55614962-55614981 | None:intergenic | 40.0% | |
| TAGATCTCTCAGCATTGCTT+GGG | - | chr1_3:55615022-55615041 | Msa0126520:CDS | 40.0% | |
| ATGATAAGCGCTATTGGAAC+TGG | - | chr1_3:55615048-55615067 | Msa0126520:CDS | 40.0% | |
| GCCCTTGTACTTCAACAAAA+CGG | - | chr1_3:55615464-55615483 | Msa0126520:intron | 40.0% | |
| !! | GACCGTTTTGTTGAAGTACA+AGG | + | chr1_3:55615469-55615488 | None:intergenic | 40.0% |
| TGGCTCAGCTGGATTAAATA+TGG | - | chr1_3:55615836-55615855 | Msa0126520:intron | 40.0% | |
| GGACCAATTGATGTATCAAG+GGG | - | chr1_3:55615857-55615876 | Msa0126520:intron | 40.0% | |
| GGGTGCAGATATGAAAAAAG+GGG | - | chr1_3:55615946-55615965 | Msa0126520:intron | 40.0% | |
| GTGCAAAAGCAACAGCATAT+AGG | - | chr1_3:55615968-55615987 | Msa0126520:intron | 40.0% | |
| AGCATATAGGACAAAACTGC+AGG | - | chr1_3:55615981-55616000 | Msa0126520:intron | 40.0% | |
| ATATAGGACAAAACTGCAGG+TGG | - | chr1_3:55615984-55616003 | Msa0126520:intron | 40.0% | |
| TATAGGACAAAACTGCAGGT+GGG | - | chr1_3:55615985-55616004 | Msa0126520:intron | 40.0% | |
| ACGTGAAGAAAGGAAGAAGA+AGG | + | chr1_3:55616045-55616064 | None:intergenic | 40.0% | |
| GCGTGAAAATCCAAGCAAAA+TGG | + | chr1_3:55616146-55616165 | None:intergenic | 40.0% | |
| ATAGAGAGAAAAACAGAGCC+TGG | - | chr1_3:55616207-55616226 | Msa0126520:intron | 40.0% | |
| TAGAGAGAAAAACAGAGCCT+GGG | - | chr1_3:55616208-55616227 | Msa0126520:intron | 40.0% | |
| ! | TTACGAAGCATTACGGATGA+AGG | + | chr1_3:55616453-55616472 | None:intergenic | 40.0% |
| !! | TGGACATCAGTTAGTCTTTG+AGG | - | chr1_3:55616763-55616782 | Msa0126520:intron | 40.0% |
| !! | GATGTTGATTTGTGCCATTG+TGG | - | chr1_3:55617059-55617078 | Msa0126520:intron | 40.0% |
| CAAAGGTAATTCACTAGCCA+CGG | + | chr1_3:55617108-55617127 | None:intergenic | 40.0% | |
| ATTAACTGGGTAGGTCACTA+AGG | - | chr1_3:55617164-55617183 | Msa0126520:intron | 40.0% | |
| TTAACTGGGTAGGTCACTAA+GGG | - | chr1_3:55617165-55617184 | Msa0126520:intron | 40.0% | |
| CAAGAAGTTGAGCAACTTCA+GGG | + | chr1_3:55617325-55617344 | None:intergenic | 40.0% | |
| TCAAGAAGTTGAGCAACTTC+AGG | + | chr1_3:55617326-55617345 | None:intergenic | 40.0% | |
| TTGCTCAACTTCTTGAAGTG+TGG | - | chr1_3:55617330-55617349 | Msa0126520:intron | 40.0% | |
| TGTGGTGGCTTGATATTAGT+GGG | - | chr1_3:55617348-55617367 | Msa0126520:intron | 40.0% | |
| AGTATTTGGGGACAAGCTAA+GGG | + | chr1_3:55617384-55617403 | None:intergenic | 40.0% | |
| !! | AGGACAGTTCTGAAATCCTT+TGG | + | chr1_3:55617444-55617463 | None:intergenic | 40.0% |
| TGTCTGTTTGGATCCAAATG+TGG | - | chr1_3:55617511-55617530 | Msa0126520:intron | 40.0% | |
| TTTGGATCCAAATGTGGAAG+TGG | - | chr1_3:55617517-55617536 | Msa0126520:intron | 40.0% | |
| AGACGTCCTGATGAATGTTA+AGG | - | chr1_3:55617652-55617671 | Msa0126520:intron | 40.0% | |
| GTAGCTCCTTAACATTCATC+AGG | + | chr1_3:55617661-55617680 | None:intergenic | 40.0% | |
| AAGAGTGGTCTCTTTGTTGA+AGG | - | chr1_3:55617689-55617708 | Msa0126520:exon | 40.0% | |
| CATTCCATGAACTATGCAAG+GGG | - | chr1_3:55617747-55617766 | Msa0126520:five_prime_UTR | 40.0% | |
| TTGGGATACCTAAGGATGTG+TGG | - | chr1_3:55614799-55614818 | Msa0126520:CDS | 45.0% | |
| AGACAGTTCCGAGCATCAAA+AGG | - | chr1_3:55614834-55614853 | Msa0126520:CDS | 45.0% | |
| CTAGATCTCTCAGCATTGCT+TGG | - | chr1_3:55615021-55615040 | Msa0126520:CDS | 45.0% | |
| AGATCTCTCAGCATTGCTTG+GGG | - | chr1_3:55615023-55615042 | Msa0126520:CDS | 45.0% | |
| GGATTAATATGCCTGACTCC+AGG | - | chr1_3:55615069-55615088 | Msa0126520:CDS | 45.0% | |
| ATCTAAGCTAACCTGGAGTC+AGG | + | chr1_3:55615083-55615102 | None:intergenic | 45.0% | |
| !!! | CCAGGATTTTTCTAGAGCCT+GGG | - | chr1_3:55615280-55615299 | Msa0126520:intron | 45.0% |
| CTTCAACAAAACGGTCTTCG+CGG | - | chr1_3:55615473-55615492 | Msa0126520:intron | 45.0% | |
| GGACCCCTTGATACATCAAT+TGG | + | chr1_3:55615863-55615882 | None:intergenic | 45.0% | |
| !! | TGCTTTACTTGCTTTTGCCC+AGG | + | chr1_3:55616228-55616247 | None:intergenic | 45.0% |
| GTAAAGCAGAAGCAGAAGCA+TGG | - | chr1_3:55616240-55616259 | Msa0126520:intron | 45.0% | |
| TGATGCTTAGCTGAAGTCAG+GGG | + | chr1_3:55616351-55616370 | None:intergenic | 45.0% | |
| CTGATGCTTAGCTGAAGTCA+GGG | + | chr1_3:55616352-55616371 | None:intergenic | 45.0% | |
| TCAGCTAAGCATCAGGATTC+AGG | - | chr1_3:55616357-55616376 | Msa0126520:intron | 45.0% | |
| TGGGTGAAGACTGAATAGCA+TGG | + | chr1_3:55616392-55616411 | None:intergenic | 45.0% | |
| GCATTACGGATGAAGGATCT+TGG | + | chr1_3:55616446-55616465 | None:intergenic | 45.0% | |
| ! | GATTGGTTGTCGCAGCAATT+AGG | + | chr1_3:55616495-55616514 | None:intergenic | 45.0% |
| GTCCTATGCAAAAGCTGACT+AGG | - | chr1_3:55616926-55616945 | Msa0126520:intron | 45.0% | |
| GTAAGATGTAGTGCATCTGC+AGG | + | chr1_3:55616980-55616999 | None:intergenic | 45.0% | |
| !! | GTTGATTTGTGCCATTGTGG+AGG | - | chr1_3:55617062-55617081 | Msa0126520:intron | 45.0% |
| !!! | TTGCAGTGCTACTTTTGAGC+AGG | - | chr1_3:55617297-55617316 | Msa0126520:intron | 45.0% |
| CTCAACTTCTTGAAGTGTGG+TGG | - | chr1_3:55617333-55617352 | Msa0126520:intron | 45.0% | |
| GTGTGGTGGCTTGATATTAG+TGG | - | chr1_3:55617347-55617366 | Msa0126520:intron | 45.0% | |
| GAGTATTTGGGGACAAGCTA+AGG | + | chr1_3:55617385-55617404 | None:intergenic | 45.0% | |
| !! | GAGTTATCAGTTGGTGTCGA+AGG | - | chr1_3:55617467-55617486 | Msa0126520:CDS | 45.0% |
| !! | TTATCAGTTGGTGTCGAAGG+TGG | - | chr1_3:55617470-55617489 | Msa0126520:CDS | 45.0% |
| TCCAAATGTGGAAGTGGAAG+TGG | - | chr1_3:55617523-55617542 | Msa0126520:intron | 45.0% | |
| TCCACTTCCACTTCCACATT+TGG | + | chr1_3:55617527-55617546 | None:intergenic | 45.0% | |
| AATGTGGAAGTGGAAGTGGA+AGG | - | chr1_3:55617527-55617546 | Msa0126520:intron | 45.0% | |
| TGGGTGGTTGGAGATTGAAA+TGG | - | chr1_3:55617601-55617620 | Msa0126520:intron | 45.0% | |
| GGGTGGTTGGAGATTGAAAT+GGG | - | chr1_3:55617602-55617621 | Msa0126520:intron | 45.0% | |
| GGTGGTTGGAGATTGAAATG+GGG | - | chr1_3:55617603-55617622 | Msa0126520:intron | 45.0% | |
| GTGGTTGGAGATTGAAATGG+GGG | - | chr1_3:55617604-55617623 | Msa0126520:intron | 45.0% | |
| GAAATGGGGGAGTTCAATTC+AGG | - | chr1_3:55617617-55617636 | Msa0126520:intron | 45.0% | |
| ! | GAGCTACATCTTTGGAAGAG+TGG | - | chr1_3:55617674-55617693 | Msa0126520:CDS | 45.0% |
| AAGACCCCTTGCATAGTTCA+TGG | + | chr1_3:55617754-55617773 | None:intergenic | 45.0% | |
| ! | TATGCAAGGGGTCTTGTGTT+TGG | - | chr1_3:55617759-55617778 | Msa0126520:five_prime_UTR | 45.0% |
| TAGTCCGTACACGCGTAGTA+CGG | + | chr1_3:55614690-55614709 | None:intergenic | 50.0% | |
| CAGGCTGGCATCTTCATCTT+GGG | - | chr1_3:55614781-55614800 | Msa0126520:CDS | 50.0% | |
| GGGGTGATGATAAGCGCTAT+TGG | - | chr1_3:55615042-55615061 | Msa0126520:CDS | 50.0% | |
| !!! | GCCAGGATTTTTCTAGAGCC+TGG | - | chr1_3:55615279-55615298 | Msa0126520:intron | 50.0% |
| !! | CCCAGGCTCTAGAAAAATCC+TGG | + | chr1_3:55615283-55615302 | None:intergenic | 50.0% |
| TCGGGATACAAATTTCGCCC+AGG | + | chr1_3:55615300-55615319 | None:intergenic | 50.0% | |
| AAGCATGGAGTCGCGACTAA+TGG | - | chr1_3:55616255-55616274 | Msa0126520:intron | 50.0% | |
| AGCATGGAGTCGCGACTAAT+GGG | - | chr1_3:55616256-55616275 | Msa0126520:intron | 50.0% | |
| AGTAAAGCAGAAGCAGAGCC+TGG | - | chr1_3:55616293-55616312 | Msa0126520:intron | 50.0% | |
| GTAAAGCAGAAGCAGAGCCT+GGG | - | chr1_3:55616294-55616313 | Msa0126520:intron | 50.0% | |
| CCTGATGCTTAGCTGAAGTC+AGG | + | chr1_3:55616353-55616372 | None:intergenic | 50.0% | |
| CCTGACTTCAGCTAAGCATC+AGG | - | chr1_3:55616350-55616369 | Msa0126520:intron | 50.0% | |
| TGCTTCAAGCCCAACTTGGA+TGG | + | chr1_3:55616423-55616442 | None:intergenic | 50.0% | |
| ! | TTGGTGCTTCAAGCCCAACT+TGG | + | chr1_3:55616427-55616446 | None:intergenic | 50.0% |
| TGCAGCTGCAAGTGTAAGGA+TGG | + | chr1_3:55616904-55616923 | None:intergenic | 50.0% | |
| ACTCTGCAGCTGCAAGTGTA+AGG | + | chr1_3:55616908-55616927 | None:intergenic | 50.0% | |
| ! | GGCCTAGTCAGCTTTTGCAT+AGG | + | chr1_3:55616931-55616950 | None:intergenic | 50.0% |
| TAGGCCACATGTGTAGACAC+TGG | - | chr1_3:55616945-55616964 | Msa0126520:intron | 50.0% | |
| GTGTCCAGTGTCTACACATG+TGG | + | chr1_3:55616952-55616971 | None:intergenic | 50.0% | |
| ACAGTACTCAGCCTCCACAA+TGG | + | chr1_3:55617076-55617095 | None:intergenic | 50.0% | |
| TGGAAGTGGAAGTGGAAGGT+AGG | - | chr1_3:55617531-55617550 | Msa0126520:intron | 50.0% | |
| GTCCTAGTGTGAGAAGCGAT+GGG | - | chr1_3:55617582-55617601 | Msa0126520:intron | 50.0% | |
| TCACCCGTACTACGCGTGTA+CGG | - | chr1_3:55614683-55614702 | Msa0126520:three_prime_UTR | 55.0% | |
| AGTCCGTACACGCGTAGTAC+GGG | + | chr1_3:55614689-55614708 | None:intergenic | 55.0% | |
| CCAAGATGAAGATGCCAGCC+TGG | + | chr1_3:55614783-55614802 | None:intergenic | 55.0% | |
| CCAGGCTGGCATCTTCATCT+TGG | - | chr1_3:55614780-55614799 | Msa0126520:CDS | 55.0% | |
| AAAAATCCTGGCTCCGCCAC+TGG | + | chr1_3:55615271-55615290 | None:intergenic | 55.0% | |
| CTTCCTTCCTTGTTGACCGC+GGG | + | chr1_3:55616012-55616031 | None:intergenic | 55.0% | |
| CCTTCCTTCCTTGTTGACCG+CGG | + | chr1_3:55616013-55616032 | None:intergenic | 55.0% | |
| CGGTCAACAAGGAAGGAAGG+AGG | - | chr1_3:55616013-55616032 | Msa0126520:intron | 55.0% | |
| ! | TGGAGTCGCGACTAATGGGT+TGG | - | chr1_3:55616260-55616279 | Msa0126520:intron | 55.0% |
| !! | GGAGTCGCGACTAATGGGTT+GGG | - | chr1_3:55616261-55616280 | Msa0126520:intron | 55.0% |
| TGCTTAGCTGAAGTCAGGGG+CGG | + | chr1_3:55616348-55616367 | None:intergenic | 55.0% | |
| ! | TGGAGGCTGAGTACTGTCTC+TGG | - | chr1_3:55617079-55617098 | Msa0126520:intron | 55.0% |
| AGGCAGCATGACAGAGCAGT+AGG | - | chr1_3:55617551-55617570 | Msa0126520:intron | 55.0% | |
| CGTCCTAGTGTGAGAAGCGA+TGG | - | chr1_3:55617581-55617600 | Msa0126520:intron | 55.0% | |
| CACCCATCGCTTCTCACACT+AGG | + | chr1_3:55617587-55617606 | None:intergenic | 55.0% | |
| CTAGTGTGAGAAGCGATGGG+TGG | - | chr1_3:55617585-55617604 | Msa0126520:intron | 55.0% | |
| TGTGAGAAGCGATGGGTGGT+TGG | - | chr1_3:55617589-55617608 | Msa0126520:intron | 55.0% | |
| ! | GCAAGGGGTCTTGTGTTTGG+TGG | - | chr1_3:55617762-55617781 | Msa0126520:five_prime_UTR | 55.0% |
| TCCACCACCACTTCAGCCAG+TGG | - | chr1_3:55615252-55615271 | Msa0126520:intron | 60.0% | |
| ACCACCACTTCAGCCAGTGG+CGG | - | chr1_3:55615255-55615274 | Msa0126520:intron | 60.0% | |
| AAAACTGCAGGTGGGACCCG+CGG | - | chr1_3:55615993-55616012 | Msa0126520:intron | 60.0% | |
| CCGCGGTCAACAAGGAAGGA+AGG | - | chr1_3:55616010-55616029 | Msa0126520:intron | 60.0% | |
| GTTTCACCCCCAGCTAGGCT+GGG | + | chr1_3:55616326-55616345 | None:intergenic | 60.0% | |
| AGTACTGTCTCTGGCAGCCG+TGG | - | chr1_3:55617088-55617107 | Msa0126520:intron | 60.0% | |
| ! | GCCACTGGCTGAAGTGGTGG+TGG | + | chr1_3:55615256-55615275 | None:intergenic | 65.0% |
| ! | TCCGCCACTGGCTGAAGTGG+TGG | + | chr1_3:55615259-55615278 | None:intergenic | 65.0% |
| GGACCCGCGGTCAACAAGGA+AGG | - | chr1_3:55616006-55616025 | Msa0126520:intron | 65.0% | |
| GGCACTAGCCCAGCCTAGCT+GGG | - | chr1_3:55616315-55616334 | Msa0126520:intron | 65.0% | |
| GCACTAGCCCAGCCTAGCTG+GGG | - | chr1_3:55616316-55616335 | Msa0126520:intron | 65.0% | |
| CACTAGCCCAGCCTAGCTGG+GGG | - | chr1_3:55616317-55616336 | Msa0126520:intron | 65.0% | |
| GGTTTCACCCCCAGCTAGGC+TGG | + | chr1_3:55616327-55616346 | None:intergenic | 65.0% | |
| ! | GGCTCCGCCACTGGCTGAAG+TGG | + | chr1_3:55615262-55615281 | None:intergenic | 70.0% |
| ! | CTTCAGCCAGTGGCGGAGCC+AGG | - | chr1_3:55615262-55615281 | Msa0126520:intron | 70.0% |
| GGTGGGACCCGCGGTCAACA+AGG | - | chr1_3:55616002-55616021 | Msa0126520:intron | 70.0% | |
| !! | GCTAGGCTGGGCTAGTGCCC+AGG | + | chr1_3:55616314-55616333 | None:intergenic | 70.0% |
| GGGCACTAGCCCAGCCTAGC+TGG | - | chr1_3:55616314-55616333 | Msa0126520:intron | 70.0% | |
| GGGCGGTTTCACCCCCAGCT+AGG | + | chr1_3:55616331-55616350 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 55614676 | 55617832 | 55614676 | ID=Msa0126520;Name=Msa0126520 |
| chr1_3 | mRNA | 55614676 | 55617832 | 55614676 | ID=Msa0126520-mRNA-1;Parent=Msa0126520;Name=Msa0126520-mRNA-1;_AED=0.04;_eAED=0.04;_QI=138|1|1|1|1|1|3|99|188 |
| chr1_3 | exon | 55614676 | 55615189 | 55614676 | ID=Msa0126520-mRNA-1:exon:17363;Parent=Msa0126520-mRNA-1 |
| chr1_3 | exon | 55617418 | 55617527 | 55617418 | ID=Msa0126520-mRNA-1:exon:17362;Parent=Msa0126520-mRNA-1 |
| chr1_3 | exon | 55617653 | 55617832 | 55617653 | ID=Msa0126520-mRNA-1:exon:17361;Parent=Msa0126520-mRNA-1 |
| chr1_3 | five_prime_UTR | 55617695 | 55617832 | 55617695 | ID=Msa0126520-mRNA-1:five_prime_utr;Parent=Msa0126520-mRNA-1 |
| chr1_3 | CDS | 55617653 | 55617694 | 55617653 | ID=Msa0126520-mRNA-1:cds;Parent=Msa0126520-mRNA-1 |
| chr1_3 | CDS | 55617418 | 55617527 | 55617418 | ID=Msa0126520-mRNA-1:cds;Parent=Msa0126520-mRNA-1 |
| chr1_3 | CDS | 55614775 | 55615189 | 55614775 | ID=Msa0126520-mRNA-1:cds;Parent=Msa0126520-mRNA-1 |
| chr1_3 | three_prime_UTR | 55614676 | 55614774 | 55614676 | ID=Msa0126520-mRNA-1:three_prime_utr;Parent=Msa0126520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
