Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147690 | XP_013448517.1 | 97.561 | 533 | 12 | 1 | 1 | 533 | 1 | 532 | 0.0 | 1073 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147690 | sp|Q42290|MPPB_ARATH | 75.281 | 534 | 128 | 3 | 1 | 533 | 1 | 531 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147690 | A0A072TYG3 | 97.561 | 533 | 12 | 1 | 1 | 533 | 1 | 532 | 0.0 | 1073 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094940 | Msa1147690 | 0.825433 | 4.700354e-54 | -8.615850e-47 |
| Msa0189080 | Msa1147690 | 0.803983 | 2.686388e-49 | -8.615850e-47 |
| Msa1019190 | Msa1147690 | 0.910325 | 2.124493e-82 | -8.615850e-47 |
| Msa1104120 | Msa1147690 | 0.919722 | 3.153775e-87 | -8.615850e-47 |
| Msa0260270 | Msa1147690 | 0.817781 | 2.759154e-52 | -8.615850e-47 |
| Msa0304270 | Msa1147690 | 0.840676 | 7.532518e-58 | -8.615850e-47 |
| Msa0304310 | Msa1147690 | 0.817619 | 3.001524e-52 | -8.615850e-47 |
| Msa1147690 | Msa1314110 | 0.829169 | 5.984322e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147690 | MtrunA17_Chr7g0234701 | 97.561 | 533 | 12 | 1 | 1 | 533 | 1 | 532 | 0.0 | 1073 |
| Msa1147690 | MtrunA17_Chr8g0340831 | 31.481 | 432 | 278 | 11 | 97 | 521 | 77 | 497 | 3.46e-59 | 204 |
| Msa1147690 | MtrunA17_Chr8g0389651 | 31.111 | 450 | 282 | 16 | 82 | 521 | 69 | 500 | 2.08e-55 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1147690 | AT3G02090.1 | 75.281 | 534 | 128 | 3 | 1 | 533 | 1 | 531 | 0.0 | 840 |
| Msa1147690 | AT3G02090.2 | 74.901 | 506 | 123 | 3 | 1 | 505 | 1 | 503 | 0.0 | 788 |
| Msa1147690 | AT3G16480.1 | 29.933 | 451 | 293 | 11 | 84 | 527 | 63 | 497 | 2.63e-51 | 183 |
| Msa1147690 | AT1G51980.1 | 29.439 | 428 | 288 | 10 | 99 | 522 | 79 | 496 | 4.83e-51 | 182 |
| Msa1147690 | AT1G51980.2 | 30.789 | 380 | 250 | 9 | 99 | 474 | 79 | 449 | 2.16e-46 | 168 |
Find 190 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTAATTCATACAAGAATT+TGG | 0.107184 | 7_4:-27108113 | None:intergenic |
| TCCCCTTGGCAGAACCATTT+TGG | 0.120950 | 7_4:+27104323 | Msa1147690:CDS |
| TGTGCTCAATTTAAACTTAA+TGG | 0.136934 | 7_4:+27107928 | Msa1147690:three_prime_UTR |
| GGAAGAGGAGATTGAGAATA+TGG | 0.156727 | 7_4:+27102977 | Msa1147690:CDS |
| TTTGGAGCATATGATATTTA+AGG | 0.160878 | 7_4:+27102926 | Msa1147690:CDS |
| GCCTGTTGCGTTGGATATTT+TGG | 0.171866 | 7_4:+27103070 | Msa1147690:CDS |
| GTGTGGCTAGGGTTTGGTTT+GGG | 0.202173 | 7_4:-27102456 | None:intergenic |
| AGAGTTGTGATGCGAGTTTC+AGG | 0.218151 | 7_4:-27102783 | None:intergenic |
| CGTGTGTGGTCACGGATTTC+GGG | 0.227157 | 7_4:-27102747 | None:intergenic |
| TCCTGATTCAATTGCTTTGA+TGG | 0.229373 | 7_4:+27104896 | Msa1147690:CDS |
| GACAACCAAGTTGGCTTATC+AGG | 0.231981 | 7_4:+27106109 | Msa1147690:CDS |
| GAGAAAGGGATGTTATTCTT+AGG | 0.233093 | 7_4:+27103138 | Msa1147690:CDS |
| TCGTGTGTGGTCACGGATTT+CGG | 0.234643 | 7_4:-27102748 | None:intergenic |
| CCTCATTGATTTAGTGCATT+TGG | 0.251085 | 7_4:+27108206 | Msa1147690:three_prime_UTR |
| ATTAATTCATACAAGAATTT+GGG | 0.258457 | 7_4:-27108112 | None:intergenic |
| CAGAAGCCAGGGTGGGGTTC+GGG | 0.279001 | 7_4:-27108165 | None:intergenic |
| CCGAACCCCACCCTGGCTTC+TGG | 0.289464 | 7_4:+27108166 | Msa1147690:three_prime_UTR |
| AAGACCCGTGTCCTTGTAAT+TGG | 0.292153 | 7_4:-27105132 | None:intergenic |
| TCGCTTCTGCTTCACATTGA+TGG | 0.297186 | 7_4:+27107324 | Msa1147690:CDS |
| GAGGAGGAATGCGAGGGATT+TGG | 0.298473 | 7_4:+27102956 | Msa1147690:CDS |
| GTTCGGAGGTGGTGGGGAAG+GGG | 0.298980 | 7_4:-27102628 | None:intergenic |
| TGCAAGCAATGCTGGGTTCT+TGG | 0.313082 | 7_4:+27104922 | Msa1147690:CDS |
| CCAGAAGCCAGGGTGGGGTT+CGG | 0.319072 | 7_4:-27108166 | None:intergenic |
| AGGCCATCCAGAGGCATATA+TGG | 0.333653 | 7_4:-27107982 | None:intergenic |
| CAAAGATCACTTCCTCTGTT+TGG | 0.333829 | 7_4:-27104269 | None:intergenic |
| TGGTCACGGATTTCGGGTTT+AGG | 0.334517 | 7_4:-27102741 | None:intergenic |
| GGACTGCTACCGTTGGGGTT+TGG | 0.368224 | 7_4:+27102850 | Msa1147690:CDS |
| CAGCAGGAGGGGAAAACATA+TGG | 0.368549 | 7_4:+27104952 | Msa1147690:CDS |
| TTTAAACTTAATGGAATGTC+TGG | 0.369437 | 7_4:+27107937 | Msa1147690:three_prime_UTR |
| GGATGTTATTCTTAGGGAAA+TGG | 0.373559 | 7_4:+27103145 | Msa1147690:CDS |
| GATCCACGTTTCCTCAAATT+CGG | 0.382243 | 7_4:+27102714 | Msa1147690:CDS |
| TTGGAGCATATGATATTTAA+GGG | 0.382979 | 7_4:+27102927 | Msa1147690:CDS |
| GCTCAAGGACTGCTACCGTT+GGG | 0.383692 | 7_4:+27102844 | Msa1147690:CDS |
| TTACCTTGTCATAAATAAAT+CGG | 0.386383 | 7_4:-27107722 | None:intergenic |
| AGGGCTGCCCGTGTGTGGCT+AGG | 0.390791 | 7_4:-27102468 | None:intergenic |
| TTCGGAGGTGGTGGGGAAGG+GGG | 0.391411 | 7_4:-27102627 | None:intergenic |
| TGCAACACGTTTAATTGTAC+TGG | 0.394685 | 7_4:-27107697 | None:intergenic |
| ACGTTCGGAGGTGGTGGGGA+AGG | 0.396814 | 7_4:-27102630 | None:intergenic |
| CTAGCAAACAATTCAGCAAA+TGG | 0.400249 | 7_4:-27107657 | None:intergenic |
| CGTCTGAACCAGTTGTAATC+AGG | 0.402332 | 7_4:-27107867 | None:intergenic |
| GATGGTCATGCAAGCAATGC+TGG | 0.404594 | 7_4:+27104914 | Msa1147690:CDS |
| GTGGCGACACGGAGTCCGTT+AGG | 0.407403 | 7_4:-27102807 | None:intergenic |
| ATTCAAAGTTTGATGAGAAT+CGG | 0.408002 | 7_4:+27103108 | Msa1147690:CDS |
| TGTGTGGCTAGGGTTTGGTT+TGG | 0.409673 | 7_4:-27102457 | None:intergenic |
| GCCCGTGTGTGGCTAGGGTT+TGG | 0.412591 | 7_4:-27102462 | None:intergenic |
| CGTTCGGAGGTGGTGGGGAA+GGG | 0.413130 | 7_4:-27102629 | None:intergenic |
| ACCATCAAAGCAATTGAATC+AGG | 0.413135 | 7_4:-27104897 | None:intergenic |
| TTGTTTCAGCTACTCACATA+TGG | 0.414073 | 7_4:+27107624 | Msa1147690:intron |
| AATTTGAGGAAACGTGGATC+TGG | 0.422726 | 7_4:-27102711 | None:intergenic |
| AGCGTTTACCTGATTACAAC+TGG | 0.423477 | 7_4:+27107859 | Msa1147690:CDS |
| AGCAACTCAGTTGGTTGAAA+AGG | 0.424795 | 7_4:+27104683 | Msa1147690:CDS |
| ATCATGACGTTCGGAGGTGG+TGG | 0.429511 | 7_4:-27102636 | None:intergenic |
| TAATCAGGTAAACGCTGAAT+AGG | 0.429534 | 7_4:-27107852 | None:intergenic |
| TTCAAGGTGATAGCTGCATC+TGG | 0.431989 | 7_4:+27104588 | Msa1147690:intron |
| CTCAAAAGAGACCAGAAGCC+AGG | 0.433705 | 7_4:-27108177 | None:intergenic |
| GTTCTGAGCAGGTCCCAAAA+TGG | 0.434416 | 7_4:-27104337 | None:intergenic |
| GCCAAAATATCCAACGCAAC+AGG | 0.437846 | 7_4:-27103071 | None:intergenic |
| GTGCTCTCAGCCGGACTGCT+TGG | 0.443674 | 7_4:+27106058 | Msa1147690:intron |
| AGCTGAAGATATTGGTCGTC+AGG | 0.444449 | 7_4:+27107359 | Msa1147690:CDS |
| AGAAAGGGATGTTATTCTTA+GGG | 0.445881 | 7_4:+27103139 | Msa1147690:CDS |
| TGCCTCTGGATGGCCTGTTT+AGG | 0.447715 | 7_4:+27107989 | Msa1147690:three_prime_UTR |
| CGACCAATATCTTCAGCTAC+AGG | 0.448715 | 7_4:-27107354 | None:intergenic |
| TGGGTGTCCGCCGGGATGAA+CGG | 0.451419 | 7_4:-27102530 | None:intergenic |
| TGCATTGCCCTAAAATTGCT+TGG | 0.456703 | 7_4:+27108137 | Msa1147690:three_prime_UTR |
| GGGCTGCCCGTGTGTGGCTA+GGG | 0.459684 | 7_4:-27102467 | None:intergenic |
| CTCCGTCTCAAATCTCGAAC+CGG | 0.463201 | 7_4:-27102880 | None:intergenic |
| GGTTCAGACGCAGAACCTAC+TGG | 0.465267 | 7_4:+27107880 | Msa1147690:CDS |
| TATTCCTCTTGCACAATTTG+CGG | 0.470822 | 7_4:+27104845 | Msa1147690:CDS |
| TAGCAAACAATTCAGCAAAT+GGG | 0.475811 | 7_4:-27107656 | None:intergenic |
| TTCTGCCAAGGGGAGTGTAC+TGG | 0.482436 | 7_4:-27104314 | None:intergenic |
| GAAGAGGAGATTGAGAATAT+GGG | 0.483391 | 7_4:+27102978 | Msa1147690:CDS |
| GCTGTTGTCAGTGATGTAAA+TGG | 0.483428 | 7_4:+27108074 | Msa1147690:three_prime_UTR |
| TGTTACGCGTGCTCGCAATC+AGG | 0.484599 | 7_4:+27106145 | Msa1147690:CDS |
| ATGTACTCCATATATGCCTC+TGG | 0.485742 | 7_4:+27107975 | Msa1147690:three_prime_UTR |
| TGTGGCTAGGGTTTGGTTTG+GGG | 0.487876 | 7_4:-27102455 | None:intergenic |
| AGCCCTGTAGCTGAAGATAT+TGG | 0.489455 | 7_4:+27107351 | Msa1147690:CDS |
| GTGGCTAGGGTTTGGTTTGG+GGG | 0.491400 | 7_4:-27102454 | None:intergenic |
| GAATGCGAGGGATTTGGAAG+AGG | 0.493011 | 7_4:+27102962 | Msa1147690:CDS |
| AAAACGATGAAATAGAGAAA+GGG | 0.495584 | 7_4:-27102407 | None:intergenic |
| AGCAGGAGGGGAAAACATAT+GGG | 0.495604 | 7_4:+27104953 | Msa1147690:CDS |
| GTTTCTCCCGAACCCCACCC+TGG | 0.495802 | 7_4:+27108159 | Msa1147690:three_prime_UTR |
| GGCTTTCAACACCAATTACA+AGG | 0.496777 | 7_4:+27105121 | Msa1147690:CDS |
| GTTTAGGTGAACCGAATTTG+AGG | 0.498343 | 7_4:-27102725 | None:intergenic |
| ACAGACTACTTATTATGCTA+AGG | 0.499150 | 7_4:+27103031 | Msa1147690:CDS |
| GGATCGGATTGATGTGAGGA+TGG | 0.500510 | 7_4:-27102550 | None:intergenic |
| GGATGTTGCTATTGCTGCCA+TGG | 0.504114 | 7_4:+27107827 | Msa1147690:intron |
| ATTGTCTTAATGTTCTGAGC+AGG | 0.507414 | 7_4:-27104348 | None:intergenic |
| GACAGATCATCCAAGCAGTC+CGG | 0.513338 | 7_4:-27106068 | None:intergenic |
| AGAATCGGATTAGTCGAGAA+AGG | 0.515768 | 7_4:+27103123 | Msa1147690:CDS |
| GTAATCCTGTAGATGAGCTT+TGG | 0.516737 | 7_4:-27104373 | None:intergenic |
| GTTGGGGTTTGGATCGATGC+CGG | 0.517454 | 7_4:+27102861 | Msa1147690:CDS |
| AACCAAACCCTAGCCACACA+CGG | 0.518504 | 7_4:+27102460 | Msa1147690:five_prime_UTR |
| AGAGGATTCGTGTGTGGTCA+CGG | 0.519419 | 7_4:-27102755 | None:intergenic |
| TAGATCATGACGTTCGGAGG+TGG | 0.522877 | 7_4:-27102639 | None:intergenic |
| GTTTATCTACATACCATCCT+AGG | 0.523412 | 7_4:-27104417 | None:intergenic |
| ATGAACGGCGGACTAGGGTG+AGG | 0.524492 | 7_4:-27102515 | None:intergenic |
| TTCAACCAACTGAGTTGCTG+TGG | 0.525634 | 7_4:-27104679 | None:intergenic |
| TGGCGACACGGAGTCCGTTA+GGG | 0.529967 | 7_4:-27102806 | None:intergenic |
| ATGTGAGGATGGGTGTCCGC+CGG | 0.532360 | 7_4:-27102539 | None:intergenic |
| AGAGACCAGAAGCCAGGGTG+GGG | 0.532899 | 7_4:-27108171 | None:intergenic |
| TATTTAAGGGGACGGAGAGG+AGG | 0.534779 | 7_4:+27102940 | Msa1147690:CDS |
| CGATCGTAGATCATGACGTT+CGG | 0.535430 | 7_4:-27102645 | None:intergenic |
| GGTGGGATTTGTTGACAACT+TGG | 0.537207 | 7_4:-27104658 | None:intergenic |
| TATTCTTAGGGAAATGGAAG+AGG | 0.540857 | 7_4:+27103151 | Msa1147690:CDS |
| AATCACCAAAGCTCATCTAC+AGG | 0.542257 | 7_4:+27104368 | Msa1147690:CDS |
| TCCCAAAATGGTTCTGCCAA+GGG | 0.542944 | 7_4:-27104325 | None:intergenic |
| TTTGAGACGGAGGAGAGTAA+TGG | 0.543184 | 7_4:+27102891 | Msa1147690:CDS |
| CTCAAGGACTGCTACCGTTG+GGG | 0.547160 | 7_4:+27102845 | Msa1147690:CDS |
| AATGTATGAGACAACCAAGT+TGG | 0.550313 | 7_4:+27106100 | Msa1147690:CDS |
| TGGTGTTTATGCTGTCGCTA+AGG | 0.550888 | 7_4:+27105157 | Msa1147690:CDS |
| TGAAACCTGATAAGCCAACT+TGG | 0.560316 | 7_4:-27106114 | None:intergenic |
| GCTACCGCAAATTGTGCAAG+AGG | 0.561891 | 7_4:-27104849 | None:intergenic |
| GTTGATCGTCATGGTGGAGA+GGG | 0.562655 | 7_4:-27102487 | None:intergenic |
| GGCAGCGGAGGTGGAGAGAG+TGG | 0.562794 | 7_4:-27102574 | None:intergenic |
| TGAAGTTGCAGAAAGCATGA+TGG | 0.563113 | 7_4:+27105100 | Msa1147690:CDS |
| AGACACATTACACTGCTCCT+AGG | 0.563685 | 7_4:+27104400 | Msa1147690:CDS |
| GGACGGAGAGGAGGAATGCG+AGG | 0.564393 | 7_4:+27102949 | Msa1147690:CDS |
| GACAAAGTCTATAGCACACT+CGG | 0.565204 | 7_4:+27102362 | None:intergenic |
| GAATCGGATTAGTCGAGAAA+GGG | 0.565651 | 7_4:+27103124 | Msa1147690:CDS |
| GTCCCAAAATGGTTCTGCCA+AGG | 0.566241 | 7_4:-27104326 | None:intergenic |
| CGGTAGCAGTCCTTGAGCTA+AGG | 0.566416 | 7_4:-27102839 | None:intergenic |
| GGCTAGACTCCGTGGCGACA+CGG | 0.568095 | 7_4:-27102818 | None:intergenic |
| TATTATGCTAAGGTTTCGCA+AGG | 0.570942 | 7_4:+27103041 | Msa1147690:CDS |
| CAACACCAATTACAAGGACA+CGG | 0.571137 | 7_4:+27105127 | Msa1147690:CDS |
| TGTTGATCGTCATGGTGGAG+AGG | 0.571806 | 7_4:-27102488 | None:intergenic |
| AGGGGATGTGCCTGTTGCGT+TGG | 0.572773 | 7_4:+27103061 | Msa1147690:CDS |
| CATGACGTTCGGAGGTGGTG+GGG | 0.573072 | 7_4:-27102634 | None:intergenic |
| ACTGGAAAGCGGTTGCGTGT+AGG | 0.574119 | 7_4:-27104296 | None:intergenic |
| ATGGTCATGCAAGCAATGCT+GGG | 0.578859 | 7_4:+27104915 | Msa1147690:CDS |
| TGTGAGGATGGGTGTCCGCC+GGG | 0.579096 | 7_4:-27102538 | None:intergenic |
| TTATGCTAAGGTTTCGCAAG+GGG | 0.582967 | 7_4:+27103043 | Msa1147690:CDS |
| GCATATGATATTTAAGGGGA+CGG | 0.584800 | 7_4:+27102932 | Msa1147690:CDS |
| GTTGGCTTATCAGGTTTCAG+AGG | 0.585578 | 7_4:+27106118 | Msa1147690:CDS |
| TTAATTCATACAAGAATTTG+GGG | 0.585655 | 7_4:-27108111 | None:intergenic |
| GCTTTCCAGTACACTCCCCT+TGG | 0.586622 | 7_4:+27104309 | Msa1147690:CDS |
| TCATGACGTTCGGAGGTGGT+GGG | 0.587041 | 7_4:-27102635 | None:intergenic |
| GGTTCTTGGAATAAGACAGC+AGG | 0.587947 | 7_4:+27104936 | Msa1147690:CDS |
| TGGAGAGGGCTGCCCGTGTG+TGG | 0.596123 | 7_4:-27102473 | None:intergenic |
| TCAAAAGAGACCAGAAGCCA+GGG | 0.597227 | 7_4:-27108176 | None:intergenic |
| GGAAAGCGGTTGCGTGTAGG+TGG | 0.597858 | 7_4:-27104293 | None:intergenic |
| GAGGAGATTGAGAATATGGG+TGG | 0.598135 | 7_4:+27102981 | Msa1147690:CDS |
| TCGTAGATCATGACGTTCGG+AGG | 0.598880 | 7_4:-27102642 | None:intergenic |
| GATCGGATTGATGTGAGGAT+GGG | 0.599279 | 7_4:-27102549 | None:intergenic |
| TAACGGACTCCGTGTCGCCA+CGG | 0.602370 | 7_4:+27102809 | Msa1147690:CDS |
| GATGTTGCTATTGCTGCCAT+GGG | 0.603073 | 7_4:+27107828 | Msa1147690:CDS |
| AACCAACTGAGTTGCTGTGG+TGG | 0.603366 | 7_4:-27104676 | None:intergenic |
| GAGGAGTTTGTTGATCGTCA+TGG | 0.603721 | 7_4:-27102496 | None:intergenic |
| TCTGAGCTAGCACAGCGAGT+TGG | 0.603978 | 7_4:+27105071 | Msa1147690:CDS |
| AGGTGGAGAGAGTGGCGGAT+CGG | 0.604875 | 7_4:-27102566 | None:intergenic |
| CCCAAAATGGTTCTGCCAAG+GGG | 0.606028 | 7_4:-27104324 | None:intergenic |
| AAGAGACCAGAAGCCAGGGT+GGG | 0.607011 | 7_4:-27108172 | None:intergenic |
| ACCAACTGAGTTGCTGTGGT+GGG | 0.607905 | 7_4:-27104675 | None:intergenic |
| GAACTAATAGCGGTTCCAGT+AGG | 0.607907 | 7_4:-27107895 | None:intergenic |
| ACATTACACTGCTCCTAGGA+TGG | 0.609322 | 7_4:+27104404 | Msa1147690:CDS |
| TGCCGGTTCGAGATTTGAGA+CGG | 0.609632 | 7_4:+27102878 | Msa1147690:CDS |
| TGGAGCATATGATATTTAAG+GGG | 0.611078 | 7_4:+27102928 | Msa1147690:CDS |
| ACCAAACCCTAGCCACACAC+GGG | 0.612225 | 7_4:+27102461 | Msa1147690:five_prime_UTR |
| AGGAGATTGAGAATATGGGT+GGG | 0.612564 | 7_4:+27102982 | Msa1147690:CDS |
| CGCATCACAACTCTCCCTAA+CGG | 0.612727 | 7_4:+27102792 | Msa1147690:CDS |
| ATTATGCTAAGGTTTCGCAA+GGG | 0.613708 | 7_4:+27103042 | Msa1147690:CDS |
| AAACCGATTTATTTATGACA+AGG | 0.619571 | 7_4:+27107719 | Msa1147690:CDS |
| TCCCACCACAGCAACTCAGT+TGG | 0.620192 | 7_4:+27104674 | Msa1147690:CDS |
| TCTTGGAATAAGACAGCAGG+AGG | 0.621637 | 7_4:+27104939 | Msa1147690:CDS |
| AACACCAATTACAAGGACAC+GGG | 0.626009 | 7_4:+27105128 | Msa1147690:CDS |
| GACGGAGAGGAGGAATGCGA+GGG | 0.628316 | 7_4:+27102950 | Msa1147690:CDS |
| TTGGAATAAGACAGCAGGAG+GGG | 0.642210 | 7_4:+27104941 | Msa1147690:CDS |
| GACCAATATCTTCAGCTACA+GGG | 0.642469 | 7_4:-27107353 | None:intergenic |
| AAACTAAGATGAACTAATAG+CGG | 0.642849 | 7_4:-27107905 | None:intergenic |
| GTGTCCGCCGGGATGAACGG+CGG | 0.642933 | 7_4:-27102527 | None:intergenic |
| CCAAATGCACTAAATCAATG+AGG | 0.645263 | 7_4:-27108206 | None:intergenic |
| TAAACGCTGAATAGGTCCCA+TGG | 0.648283 | 7_4:-27107844 | None:intergenic |
| AAAGAGACCAGAAGCCAGGG+TGG | 0.649646 | 7_4:-27108173 | None:intergenic |
| TGATATTTAAGGGGACGGAG+AGG | 0.657266 | 7_4:+27102937 | Msa1147690:CDS |
| AAGGGGAGTGTACTGGAAAG+CGG | 0.657512 | 7_4:-27104307 | None:intergenic |
| ACTCCATATATGCCTCTGGA+TGG | 0.664489 | 7_4:+27107979 | Msa1147690:three_prime_UTR |
| GAGCGGAGAGGATTCGTGTG+TGG | 0.666040 | 7_4:-27102761 | None:intergenic |
| TGCGAGTTTCAGGAGCGGAG+AGG | 0.669751 | 7_4:-27102773 | None:intergenic |
| GCAGGAGGGGAAAACATATG+GGG | 0.669850 | 7_4:+27104954 | Msa1147690:CDS |
| GGCCTAAACAGGCCATCCAG+AGG | 0.673346 | 7_4:-27107991 | None:intergenic |
| TGTGATGCGAGTTTCAGGAG+CGG | 0.673954 | 7_4:-27102778 | None:intergenic |
| CGGTTCGAGATTTGAGACGG+AGG | 0.674101 | 7_4:+27102881 | Msa1147690:CDS |
| TGAGCTAAGGCTAGACTCCG+TGG | 0.675517 | 7_4:-27102826 | None:intergenic |
| GAACCGAATTTGAGGAAACG+TGG | 0.678087 | 7_4:-27102717 | None:intergenic |
| GTAGGTTGAGGGCCAAACAG+AGG | 0.679038 | 7_4:+27104257 | Msa1147690:intron |
| AGCGGAGGTGGAGAGAGTGG+CGG | 0.691471 | 7_4:-27102571 | None:intergenic |
| GAGTTTGTTGATCGTCATGG+TGG | 0.694220 | 7_4:-27102493 | None:intergenic |
| CTTGGAATAAGACAGCAGGA+GGG | 0.696018 | 7_4:+27104940 | Msa1147690:CDS |
| GGCATCGATCCAAACCCCAA+CGG | 0.698937 | 7_4:-27102859 | None:intergenic |
| TGGCGGATCGGATTGATGTG+AGG | 0.715947 | 7_4:-27102554 | None:intergenic |
| TAGTCCGCCGTTCATCCCGG+CGG | 0.725807 | 7_4:+27102523 | Msa1147690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATTAAGACAAAAT+AGG | - | chr7_4:27104183-27104202 | None:intergenic | 10.0% |
| !! | TTAAATATTATAACCTATAA+TGG | + | chr7_4:27105459-27105478 | Msa1147690:intron | 10.0% |
| !!! | TAATTTTTATCATTCAAAAT+TGG | - | chr7_4:27106520-27106539 | None:intergenic | 10.0% |
| !! | TGCAAATTAAATTAATTTAT+GGG | + | chr7_4:27106628-27106647 | Msa1147690:intron | 10.0% |
| !! | AATAAGTATGAAATATTAAA+TGG | - | chr7_4:27107596-27107615 | None:intergenic | 10.0% |
| !!! | ATTTTTCATTTATTTGTTAT+AGG | + | chr7_4:27108017-27108036 | Msa1147690:three_prime_UTR | 10.0% |
| !!! | GAGTAAAAAATTAGATTTTA+AGG | + | chr7_4:27103660-27103679 | Msa1147690:intron | 15.0% |
| !!! | ATTTTTTTTTTGTTGTTGTA+AGG | + | chr7_4:27103723-27103742 | Msa1147690:intron | 15.0% |
| !! | ATTATTACAACAACAAATAT+CGG | - | chr7_4:27103943-27103962 | None:intergenic | 15.0% |
| !! | GTTGTTGTAATAATAATAAT+TGG | + | chr7_4:27103949-27103968 | Msa1147690:intron | 15.0% |
| !!! | GTCTTAATTTTTTATTTGTT+TGG | + | chr7_4:27104188-27104207 | Msa1147690:intron | 15.0% |
| !! | TAATATATAAATATGGAAGT+TGG | + | chr7_4:27104534-27104553 | Msa1147690:intron | 15.0% |
| !!! | TTTGAAACTATAATAGTTAA+TGG | + | chr7_4:27105745-27105764 | Msa1147690:intron | 15.0% |
| !! | GTGCAAATTAAATTAATTTA+TGG | + | chr7_4:27106627-27106646 | Msa1147690:intron | 15.0% |
| !! | GCAAATTAAATTAATTTATG+GGG | + | chr7_4:27106629-27106648 | Msa1147690:intron | 15.0% |
| !! | CAAATTAAATTAATTTATGG+GGG | + | chr7_4:27106630-27106649 | Msa1147690:intron | 15.0% |
| !! | AACAAATAAATGAAAAATGA+TGG | - | chr7_4:27108015-27108034 | None:intergenic | 15.0% |
| !! | ATTAATTCATACAAGAATTT+GGG | - | chr7_4:27108115-27108134 | None:intergenic | 15.0% |
| !! | TATTAATTCATACAAGAATT+TGG | - | chr7_4:27108116-27108135 | None:intergenic | 15.0% |
| !! | TATGAAAAAACAACTTATGA+AGG | + | chr7_4:27103501-27103520 | Msa1147690:intron | 20.0% |
| !!! | ATTTTGAAGCCTTTTTTATT+TGG | + | chr7_4:27103848-27103867 | Msa1147690:intron | 20.0% |
| !!! | GATTTCTAAATCCTTTTTAA+AGG | - | chr7_4:27104130-27104149 | None:intergenic | 20.0% |
| !! | GATTTAGAAATCAGAAAAAA+AGG | + | chr7_4:27104138-27104157 | Msa1147690:intron | 20.0% |
| !!! | TAAATGATATTGCTTTTTGT+AGG | + | chr7_4:27104239-27104258 | Msa1147690:intron | 20.0% |
| !! | ATAAATCAACTATATCAACA+GGG | - | chr7_4:27104773-27104792 | None:intergenic | 20.0% |
| !! | AATAAATCAACTATATCAAC+AGG | - | chr7_4:27104774-27104793 | None:intergenic | 20.0% |
| !! | AGGAGAAAAGAAATTATATT+TGG | - | chr7_4:27105685-27105704 | None:intergenic | 20.0% |
| !!! | TTTTTATCATTCAAAATTGG+TGG | - | chr7_4:27106517-27106536 | None:intergenic | 20.0% |
| !!! | GATAAGCATTTTAACTAAAT+TGG | - | chr7_4:27106987-27107006 | None:intergenic | 20.0% |
| !! | TTACCTTGTCATAAATAAAT+CGG | - | chr7_4:27107725-27107744 | None:intergenic | 20.0% |
| !! | TGCATAAATATTACAAAAAC+AGG | - | chr7_4:27108043-27108062 | None:intergenic | 20.0% |
| !! | TTAATTCATACAAGAATTTG+GGG | - | chr7_4:27108114-27108133 | None:intergenic | 20.0% |
| ! | AAAACGATGAAATAGAGAAA+GGG | - | chr7_4:27102410-27102429 | None:intergenic | 25.0% |
| ! | AAAAACGATGAAATAGAGAA+AGG | - | chr7_4:27102411-27102430 | None:intergenic | 25.0% |
| !! | TTTGGAGCATATGATATTTA+AGG | + | chr7_4:27102926-27102945 | Msa1147690:CDS | 25.0% |
| ! | TTGGAGCATATGATATTTAA+GGG | + | chr7_4:27102927-27102946 | Msa1147690:CDS | 25.0% |
| ! | ATTCAAAGTTTGATGAGAAT+CGG | + | chr7_4:27103108-27103127 | Msa1147690:CDS | 25.0% |
| !!! | TTGACATAAGTTTTAGCTTA+TGG | + | chr7_4:27103299-27103318 | Msa1147690:intron | 25.0% |
| !!! | TGACATAAGTTTTAGCTTAT+GGG | + | chr7_4:27103300-27103319 | Msa1147690:intron | 25.0% |
| !!! | ACTTATTGCGATTTTTTTGT+GGG | + | chr7_4:27103425-27103444 | Msa1147690:intron | 25.0% |
| ! | CTAATTTATTTGCCCAAAAT+AGG | - | chr7_4:27103472-27103491 | None:intergenic | 25.0% |
| !!! | TGGCTTATTTTTTTAGCTTA+TGG | - | chr7_4:27103580-27103599 | None:intergenic | 25.0% |
| ! | AAAAAGGCTTCAAAATAGAA+TGG | - | chr7_4:27103844-27103863 | None:intergenic | 25.0% |
| ! | TCTACACATCCAAATAAAAA+AGG | - | chr7_4:27103860-27103879 | None:intergenic | 25.0% |
| !! | GAATGAGCTATATTTTACAT+TGG | - | chr7_4:27104062-27104081 | None:intergenic | 25.0% |
| ! | AAGTATAGTCCAATAGATAA+AGG | + | chr7_4:27104084-27104103 | Msa1147690:intron | 25.0% |
| !!! | AATTTTACTTTGTTGATTGG+GGG | - | chr7_4:27105002-27105021 | None:intergenic | 25.0% |
| !!! | GAATTTTACTTTGTTGATTG+GGG | - | chr7_4:27105003-27105022 | None:intergenic | 25.0% |
| !!! | GGAATTTTACTTTGTTGATT+GGG | - | chr7_4:27105004-27105023 | None:intergenic | 25.0% |
| ! | ATCCATAAGAAAACCAAATT+AGG | - | chr7_4:27105188-27105207 | None:intergenic | 25.0% |
| ! | TGTTAAACAAAGTAGTACAT+TGG | + | chr7_4:27105212-27105231 | Msa1147690:intron | 25.0% |
| ! | ATCTATGAAAAACTACAAGA+GGG | - | chr7_4:27105315-27105334 | None:intergenic | 25.0% |
| ! | TATCTATGAAAAACTACAAG+AGG | - | chr7_4:27105316-27105335 | None:intergenic | 25.0% |
| !!! | GTTGTATTTAACTTGTCAAT+CGG | + | chr7_4:27105369-27105388 | Msa1147690:intron | 25.0% |
| ! | TATCTTCAATAGACCATTAT+AGG | - | chr7_4:27105475-27105494 | None:intergenic | 25.0% |
| ! | AGGTTATTTAACAAATTCAG+TGG | - | chr7_4:27105501-27105520 | None:intergenic | 25.0% |
| !!! | TTTTAGTTAGATTCAGTGAT+TGG | + | chr7_4:27105558-27105577 | Msa1147690:intron | 25.0% |
| ! | AAAAATAAAGTAGAAGTCCT+TGG | - | chr7_4:27105713-27105732 | None:intergenic | 25.0% |
| ! | TTGCTAATTGAATATGACAA+TGG | + | chr7_4:27106200-27106219 | Msa1147690:intron | 25.0% |
| ! | TTGAATATGACAATGGAATT+TGG | + | chr7_4:27106207-27106226 | Msa1147690:intron | 25.0% |
| !! | GCTTTATATTAAGAAGCTTT+TGG | + | chr7_4:27106235-27106254 | Msa1147690:intron | 25.0% |
| !!! | CTACAGAGTTAATTTTGTTT+TGG | + | chr7_4:27106282-27106301 | Msa1147690:intron | 25.0% |
| !!! | ATTGAGGAAGTATTGAATTT+AGG | - | chr7_4:27106385-27106404 | None:intergenic | 25.0% |
| ! | AGTAACTAAGAATTAGATTG+AGG | - | chr7_4:27106401-27106420 | None:intergenic | 25.0% |
| !!! | GTTACTAGTTTCTTTAAGAT+AGG | + | chr7_4:27106415-27106434 | Msa1147690:intron | 25.0% |
| !! | ATTTATGATGCCATATTTTG+TGG | + | chr7_4:27106582-27106601 | Msa1147690:intron | 25.0% |
| ! | TAAAGAAAGACCACAAAATA+TGG | - | chr7_4:27106595-27106614 | None:intergenic | 25.0% |
| ! | ACTATGACATGAAAAATGTA+AGG | - | chr7_4:27106898-27106917 | None:intergenic | 25.0% |
| ! | CATTCAAACTAAATTTCTGA+TGG | + | chr7_4:27107065-27107084 | Msa1147690:intron | 25.0% |
| ! | TCATTCTCTACTATTATACA+AGG | + | chr7_4:27107435-27107454 | Msa1147690:intron | 25.0% |
| ! | TACTATTATACAAGGACTTT+AGG | + | chr7_4:27107443-27107462 | Msa1147690:intron | 25.0% |
| ! | TGAAATATTAAATGGTAGCA+CGG | - | chr7_4:27107588-27107607 | None:intergenic | 25.0% |
| !! | AAACCGATTTATTTATGACA+AGG | + | chr7_4:27107719-27107738 | Msa1147690:CDS | 25.0% |
| ! | AAACTAAGATGAACTAATAG+CGG | - | chr7_4:27107908-27107927 | None:intergenic | 25.0% |
| ! | TGTGCTCAATTTAAACTTAA+TGG | + | chr7_4:27107928-27107947 | Msa1147690:three_prime_UTR | 25.0% |
| ! | TTTAAACTTAATGGAATGTC+TGG | + | chr7_4:27107937-27107956 | Msa1147690:three_prime_UTR | 25.0% |
| !!! | TAATGGAACTGCTCATTTTT+TGG | + | chr7_4:27102908-27102927 | Msa1147690:CDS | 30.0% |
| TGGAGCATATGATATTTAAG+GGG | + | chr7_4:27102928-27102947 | Msa1147690:CDS | 30.0% | |
| ACAGACTACTTATTATGCTA+AGG | + | chr7_4:27103031-27103050 | Msa1147690:CDS | 30.0% | |
| AGAAAGGGATGTTATTCTTA+GGG | + | chr7_4:27103139-27103158 | Msa1147690:CDS | 30.0% | |
| !! | TTTAACATGTTTGTTGTGAG+TGG | + | chr7_4:27103248-27103267 | Msa1147690:intron | 30.0% |
| !!! | GACTTATTGCGATTTTTTTG+TGG | + | chr7_4:27103424-27103443 | Msa1147690:intron | 30.0% |
| !!! | CGATTTTTTTGTGGGATTTT+GGG | + | chr7_4:27103433-27103452 | Msa1147690:intron | 30.0% |
| ATGTGTAGAAGTTGTAGTAT+TGG | + | chr7_4:27103871-27103890 | Msa1147690:intron | 30.0% | |
| TTACAACAACAAATATCGGT+GGG | - | chr7_4:27103939-27103958 | None:intergenic | 30.0% | |
| ATTACAACAACAAATATCGG+TGG | - | chr7_4:27103940-27103959 | None:intergenic | 30.0% | |
| !! | TCAACTTTTAGAGACAATGT+CGG | + | chr7_4:27103975-27103994 | Msa1147690:intron | 30.0% |
| AGAATCTCTTGTTGAATAGA+TGG | + | chr7_4:27104001-27104020 | Msa1147690:intron | 30.0% | |
| TCTACTCTACCTTTATCTAT+TGG | - | chr7_4:27104096-27104115 | None:intergenic | 30.0% | |
| !! | CCTTTTTAAAGGTTTTTCTC+TGG | - | chr7_4:27104119-27104138 | None:intergenic | 30.0% |
| ! | CCAGAGAAAAACCTTTAAAA+AGG | + | chr7_4:27104116-27104135 | Msa1147690:intron | 30.0% |
| !!! | ATATTGCTTTTTGTAGGTTG+AGG | + | chr7_4:27104245-27104264 | Msa1147690:intron | 30.0% |
| !!! | TATTGCTTTTTGTAGGTTGA+GGG | + | chr7_4:27104246-27104265 | Msa1147690:intron | 30.0% |
| TCAACTGAGCTCAAAATTAT+TGG | - | chr7_4:27104750-27104769 | None:intergenic | 30.0% | |
| ! | GGGAATTTTACTTTGTTGAT+TGG | - | chr7_4:27105005-27105024 | None:intergenic | 30.0% |
| TAAGCAAAGCATGTATCATT+GGG | - | chr7_4:27105027-27105046 | None:intergenic | 30.0% | |
| !!! | GACCTAATTTGGTTTTCTTA+TGG | + | chr7_4:27105183-27105202 | Msa1147690:intron | 30.0% |
| AAGAGGGATATATGTTCATT+TGG | - | chr7_4:27105299-27105318 | None:intergenic | 30.0% | |
| TCTAAAAGTTGGATCATTGA+AGG | - | chr7_4:27105521-27105540 | None:intergenic | 30.0% | |
| ! | ACACATACACTTCTAAAAGT+TGG | - | chr7_4:27105532-27105551 | None:intergenic | 30.0% |
| ! | TTCTTTTCTCCTTTTATCCA+AGG | + | chr7_4:27105693-27105712 | Msa1147690:intron | 30.0% |
| CTTATGTCTTTCTATGCAAT+AGG | + | chr7_4:27105830-27105849 | Msa1147690:intron | 30.0% | |
| ATGTCTTTCTATGCAATATG+TGG | + | chr7_4:27105898-27105917 | Msa1147690:intron | 30.0% | |
| TCATATTCAATTAGCAAGAC+AGG | - | chr7_4:27106197-27106216 | None:intergenic | 30.0% | |
| TTAACTCTGTAGTTGTATCT+TGG | - | chr7_4:27106274-27106293 | None:intergenic | 30.0% | |
| GAATATATGCAACTAAGTCT+TGG | + | chr7_4:27106697-27106716 | Msa1147690:intron | 30.0% | |
| GATAATAAAATTAACCAGCC+AGG | - | chr7_4:27106742-27106761 | None:intergenic | 30.0% | |
| ! | TGTTTTCATGCTCTTGATTT+TGG | + | chr7_4:27106943-27106962 | Msa1147690:intron | 30.0% |
| TTGAACGTGCTAATTCAATA+TGG | - | chr7_4:27107027-27107046 | None:intergenic | 30.0% | |
| ! | TTCTGCACATAATCTTTTGA+AGG | - | chr7_4:27107101-27107120 | None:intergenic | 30.0% |
| AGATTATGTGCAGAATATGA+AGG | + | chr7_4:27107106-27107125 | Msa1147690:intron | 30.0% | |
| AAAAACAGCATAGATGTTTG+AGG | - | chr7_4:27107175-27107194 | None:intergenic | 30.0% | |
| TAGCAAACAATTCAGCAAAT+GGG | - | chr7_4:27107659-27107678 | None:intergenic | 30.0% | |
| CCATTAGCACTTAAAAAGAT+TGG | - | chr7_4:27107786-27107805 | None:intergenic | 30.0% | |
| !!! | CCAATCTTTTTAAGTGCTAA+TGG | + | chr7_4:27107783-27107802 | Msa1147690:intron | 30.0% |
| !!! | GAGTTTTTGTTTGACGGATT+CGG | - | chr7_4:27102676-27102695 | None:intergenic | 35.0% |
| GCATATGATATTTAAGGGGA+CGG | + | chr7_4:27102932-27102951 | Msa1147690:CDS | 35.0% | |
| GAAGAGGAGATTGAGAATAT+GGG | + | chr7_4:27102978-27102997 | Msa1147690:CDS | 35.0% | |
| TATTATGCTAAGGTTTCGCA+AGG | + | chr7_4:27103041-27103060 | Msa1147690:CDS | 35.0% | |
| ATTATGCTAAGGTTTCGCAA+GGG | + | chr7_4:27103042-27103061 | Msa1147690:CDS | 35.0% | |
| GAGAAAGGGATGTTATTCTT+AGG | + | chr7_4:27103138-27103157 | Msa1147690:CDS | 35.0% | |
| GGATGTTATTCTTAGGGAAA+TGG | + | chr7_4:27103145-27103164 | Msa1147690:CDS | 35.0% | |
| TATTCTTAGGGAAATGGAAG+AGG | + | chr7_4:27103151-27103170 | Msa1147690:CDS | 35.0% | |
| !!! | GCGATTTTTTTGTGGGATTT+TGG | + | chr7_4:27103432-27103451 | Msa1147690:intron | 35.0% |
| !!! | TGTTTGGATTGGCCTATTTT+GGG | + | chr7_4:27103457-27103476 | Msa1147690:intron | 35.0% |
| ACTCATTGAACACACAAAAC+AGG | - | chr7_4:27103644-27103663 | None:intergenic | 35.0% | |
| !! | GTACAGATTTTAAGAACTGC+CGG | + | chr7_4:27103766-27103785 | Msa1147690:intron | 35.0% |
| !! | TACAGATTTTAAGAACTGCC+GGG | + | chr7_4:27103767-27103786 | Msa1147690:intron | 35.0% |
| !! | AAGTTGTAGTATTGGCAGTT+AGG | + | chr7_4:27103879-27103898 | Msa1147690:intron | 35.0% |
| !! | AGTTGTAGTATTGGCAGTTA+GGG | + | chr7_4:27103880-27103899 | Msa1147690:intron | 35.0% |
| !! | CAACTTTTAGAGACAATGTC+GGG | + | chr7_4:27103976-27103995 | Msa1147690:intron | 35.0% |
| !! | AACTTTTAGAGACAATGTCG+GGG | + | chr7_4:27103977-27103996 | Msa1147690:intron | 35.0% |
| GTTGAATAGATGGTAGAATG+TGG | + | chr7_4:27104011-27104030 | Msa1147690:intron | 35.0% | |
| ! | GTTCTCATTCTTTTGCTGAA+AGG | + | chr7_4:27104210-27104229 | Msa1147690:intron | 35.0% |
| ! | ATTGTCTTAATGTTCTGAGC+AGG | - | chr7_4:27104351-27104370 | None:intergenic | 35.0% |
| GTTTATCTACATACCATCCT+AGG | - | chr7_4:27104420-27104439 | None:intergenic | 35.0% | |
| ! | AAGGAACCTGCAATTTTTAC+TGG | + | chr7_4:27104702-27104721 | Msa1147690:CDS | 35.0% |
| TCAGAACCAGTAAAAATTGC+AGG | - | chr7_4:27104711-27104730 | None:intergenic | 35.0% | |
| !!! | TGCAATTTTTACTGGTTCTG+AGG | + | chr7_4:27104710-27104729 | Msa1147690:CDS | 35.0% |
| ! | ACTCGTTTTGTAAACAGGTT+CGG | + | chr7_4:27104808-27104827 | Msa1147690:intron | 35.0% |
| TATTCCTCTTGCACAATTTG+CGG | + | chr7_4:27104845-27104864 | Msa1147690:CDS | 35.0% | |
| TCCTGATTCAATTGCTTTGA+TGG | + | chr7_4:27104896-27104915 | Msa1147690:CDS | 35.0% | |
| ACCATCAAAGCAATTGAATC+AGG | - | chr7_4:27104900-27104919 | None:intergenic | 35.0% | |
| AAGCAAAGCATGTATCATTG+GGG | - | chr7_4:27105026-27105045 | None:intergenic | 35.0% | |
| GTAAGCAAAGCATGTATCAT+TGG | - | chr7_4:27105028-27105047 | None:intergenic | 35.0% | |
| AGTAGAAGTCCTTGGATAAA+AGG | - | chr7_4:27105705-27105724 | None:intergenic | 35.0% | |
| GTGTCTTTCTTCACAATATG+CGG | + | chr7_4:27105767-27105786 | Msa1147690:intron | 35.0% | |
| ATGTCTTTCTATGCAATAGG+TGG | + | chr7_4:27105833-27105852 | Msa1147690:intron | 35.0% | |
| TCTTTCTATGCAATATGTGG+TGG | + | chr7_4:27105901-27105920 | Msa1147690:intron | 35.0% | |
| AATGTATGAGACAACCAAGT+TGG | + | chr7_4:27106100-27106119 | Msa1147690:CDS | 35.0% | |
| GTTTAGCATATTGCATCATC+TGG | + | chr7_4:27106314-27106333 | Msa1147690:intron | 35.0% | |
| CATGGGTGAAATTTGAATCA+CGG | - | chr7_4:27106454-27106473 | None:intergenic | 35.0% | |
| ATGTCATATGCGTTCATCAT+GGG | - | chr7_4:27106471-27106490 | None:intergenic | 35.0% | |
| AATGTCATATGCGTTCATCA+TGG | - | chr7_4:27106472-27106491 | None:intergenic | 35.0% | |
| !! | CAACTGACATTTGTTGTCAT+TGG | + | chr7_4:27106554-27106573 | Msa1147690:intron | 35.0% |
| CAATAAGCTATGAATCAGGA+AGG | - | chr7_4:27106809-27106828 | None:intergenic | 35.0% | |
| ACAGCAATAAGCTATGAATC+AGG | - | chr7_4:27106813-27106832 | None:intergenic | 35.0% | |
| ! | ATGAATCCAGAGGTGTAAAA+TGG | + | chr7_4:27106837-27106856 | Msa1147690:intron | 35.0% |
| ! | TGAATCCAGAGGTGTAAAAT+GGG | + | chr7_4:27106838-27106857 | Msa1147690:intron | 35.0% |
| GTGCTAATTCAATATGGCAT+GGG | - | chr7_4:27107021-27107040 | None:intergenic | 35.0% | |
| GAACAATCCAATGAACTACT+AGG | - | chr7_4:27107136-27107155 | None:intergenic | 35.0% | |
| ! | TAGATGTTTGAGGAGTATGA+AGG | - | chr7_4:27107165-27107184 | None:intergenic | 35.0% |
| TTGTTTCAGCTACTCACATA+TGG | + | chr7_4:27107624-27107643 | Msa1147690:intron | 35.0% | |
| CTAGCAAACAATTCAGCAAA+TGG | - | chr7_4:27107660-27107679 | None:intergenic | 35.0% | |
| TGCAACACGTTTAATTGTAC+TGG | - | chr7_4:27107700-27107719 | None:intergenic | 35.0% | |
| TAATCAGGTAAACGCTGAAT+AGG | - | chr7_4:27107855-27107874 | None:intergenic | 35.0% | |
| TGAAAAATGATGGCCTAAAC+AGG | - | chr7_4:27108005-27108024 | None:intergenic | 35.0% | |
| ! | GGAGAAACCAAGCAATTTTA+GGG | - | chr7_4:27108147-27108166 | None:intergenic | 35.0% |
| CCAAATGCACTAAATCAATG+AGG | - | chr7_4:27108209-27108228 | None:intergenic | 35.0% | |
| !! | CCTCATTGATTTAGTGCATT+TGG | + | chr7_4:27108206-27108225 | Msa1147690:three_prime_UTR | 35.0% |
| !! | GCGTTGGAGTTTTTGTTTGA+CGG | - | chr7_4:27102682-27102701 | None:intergenic | 40.0% |
| ! | GATCTGGATTTTCTAAGCGT+TGG | - | chr7_4:27102698-27102717 | None:intergenic | 40.0% |
| AATTTGAGGAAACGTGGATC+TGG | - | chr7_4:27102714-27102733 | None:intergenic | 40.0% | |
| GATCCACGTTTCCTCAAATT+CGG | + | chr7_4:27102714-27102733 | Msa1147690:CDS | 40.0% | |
| GTTTAGGTGAACCGAATTTG+AGG | - | chr7_4:27102728-27102747 | None:intergenic | 40.0% | |
| GGAAGAGGAGATTGAGAATA+TGG | + | chr7_4:27102977-27102996 | Msa1147690:CDS | 40.0% | |
| AGGAGATTGAGAATATGGGT+GGG | + | chr7_4:27102982-27103001 | Msa1147690:CDS | 40.0% | |
| TTATGCTAAGGTTTCGCAAG+GGG | + | chr7_4:27103043-27103062 | Msa1147690:CDS | 40.0% | |
| !! | AGAATCGGATTAGTCGAGAA+AGG | + | chr7_4:27103123-27103142 | Msa1147690:CDS | 40.0% |
| !! | GAATCGGATTAGTCGAGAAA+GGG | + | chr7_4:27103124-27103143 | Msa1147690:CDS | 40.0% |
| !! | CATGTTTGTTGTGAGTGGTT+TGG | + | chr7_4:27103253-27103272 | Msa1147690:intron | 40.0% |
| ! | TTGTTGTGAGTGGTTTGGAT+TGG | + | chr7_4:27103258-27103277 | Msa1147690:intron | 40.0% |
| !!! | CTGTTTGGATTGGCCTATTT+TGG | + | chr7_4:27103456-27103475 | Msa1147690:intron | 40.0% |
| !! | AGCAAAGGGTTAGTTTGGAT+TGG | - | chr7_4:27103600-27103619 | None:intergenic | 40.0% |
| !! | TTCTCAGCAAAGGGTTAGTT+TGG | - | chr7_4:27103605-27103624 | None:intergenic | 40.0% |
| TGTCAGCTATTCTCAGCAAA+GGG | - | chr7_4:27103614-27103633 | None:intergenic | 40.0% | |
| !! | GTTGTAGTATTGGCAGTTAG+GGG | + | chr7_4:27103881-27103900 | Msa1147690:intron | 40.0% |
| AGATGGTAGAATGTGGAAAC+AGG | + | chr7_4:27104018-27104037 | Msa1147690:intron | 40.0% | |
| CAAAGATCACTTCCTCTGTT+TGG | - | chr7_4:27104272-27104291 | None:intergenic | 40.0% | |
| AATCACCAAAGCTCATCTAC+AGG | + | chr7_4:27104368-27104387 | Msa1147690:CDS | 40.0% | |
| GTAATCCTGTAGATGAGCTT+TGG | - | chr7_4:27104376-27104395 | None:intergenic | 40.0% | |
| CTGATCATGTATAGTGTCCA+TGG | + | chr7_4:27104460-27104479 | Msa1147690:intron | 40.0% | |
| ! | CTGATGTCTGTTTTCTGTGT+GGG | + | chr7_4:27104558-27104577 | Msa1147690:intron | 40.0% |
| AGCAACTCAGTTGGTTGAAA+AGG | + | chr7_4:27104683-27104702 | Msa1147690:CDS | 40.0% | |
| CTGTTTACAAAACGAGTGGA+TGG | - | chr7_4:27104805-27104824 | None:intergenic | 40.0% | |
| ! | CATCCACTCGTTTTGTAAAC+AGG | + | chr7_4:27104803-27104822 | Msa1147690:intron | 40.0% |
| GAACCTGTTTACAAAACGAG+TGG | - | chr7_4:27104809-27104828 | None:intergenic | 40.0% | |
| ! | CAATTTGCGGTAGCTTTTGA+AGG | + | chr7_4:27104858-27104877 | Msa1147690:CDS | 40.0% |
| !!! | TAGCTTTTGAAGGAGCATCT+TGG | + | chr7_4:27104868-27104887 | Msa1147690:CDS | 40.0% |
| ! | TTTACTTTGTTGATTGGGGG+AGG | - | chr7_4:27104999-27105018 | None:intergenic | 40.0% |
| AGCAAAGCATGTATCATTGG+GGG | - | chr7_4:27105025-27105044 | None:intergenic | 40.0% | |
| ! | TGAAGTTGCAGAAAGCATGA+TGG | + | chr7_4:27105100-27105119 | Msa1147690:CDS | 40.0% |
| GGCTTTCAACACCAATTACA+AGG | + | chr7_4:27105121-27105140 | Msa1147690:CDS | 40.0% | |
| CAACACCAATTACAAGGACA+CGG | + | chr7_4:27105127-27105146 | Msa1147690:CDS | 40.0% | |
| AACACCAATTACAAGGACAC+GGG | + | chr7_4:27105128-27105147 | Msa1147690:CDS | 40.0% | |
| CGCTAAGGTAAGACCTAATT+TGG | + | chr7_4:27105172-27105191 | Msa1147690:intron | 40.0% | |
| ACATTCCATGTCTTCCTCTT+GGG | - | chr7_4:27105267-27105286 | None:intergenic | 40.0% | |
| TCTTTCTTCACAATATGCGG+TGG | + | chr7_4:27105770-27105789 | Msa1147690:intron | 40.0% | |
| TCTTTCTATGCAATAGGTGG+TGG | + | chr7_4:27105836-27105855 | Msa1147690:intron | 40.0% | |
| !! | TAATTTGTTGTGCTCTCAGC+CGG | + | chr7_4:27106049-27106068 | Msa1147690:intron | 40.0% |
| TGAAACCTGATAAGCCAACT+TGG | - | chr7_4:27106117-27106136 | None:intergenic | 40.0% | |
| GTTCGTCAAAATACAGTTGC+AGG | - | chr7_4:27106352-27106371 | None:intergenic | 40.0% | |
| TGCTGTGTTAATGAATCCAG+AGG | + | chr7_4:27106827-27106846 | Msa1147690:intron | 40.0% | |
| ! | ACATTCCCATTTTACACCTC+TGG | - | chr7_4:27106846-27106865 | None:intergenic | 40.0% |
| CGTGCTAATTCAATATGGCA+TGG | - | chr7_4:27107022-27107041 | None:intergenic | 40.0% | |
| AGGTATGCCTAGTAGTTCAT+TGG | + | chr7_4:27107126-27107145 | Msa1147690:intron | 40.0% | |
| TACGTGAGATGTAAGGTCTA+TGG | - | chr7_4:27107387-27107406 | None:intergenic | 40.0% | |
| AATGCACTACGTGAGATGTA+AGG | - | chr7_4:27107394-27107413 | None:intergenic | 40.0% | |
| TCATTTCATGTCTGTCTTGC+AGG | + | chr7_4:27107806-27107825 | Msa1147690:intron | 40.0% | |
| AGCGTTTACCTGATTACAAC+TGG | + | chr7_4:27107859-27107878 | Msa1147690:CDS | 40.0% | |
| ATGTACTCCATATATGCCTC+TGG | + | chr7_4:27107975-27107994 | Msa1147690:three_prime_UTR | 40.0% | |
| GCTGTTGTCAGTGATGTAAA+TGG | + | chr7_4:27108074-27108093 | Msa1147690:three_prime_UTR | 40.0% | |
| TGCATTGCCCTAAAATTGCT+TGG | + | chr7_4:27108137-27108156 | Msa1147690:three_prime_UTR | 40.0% | |
| ! | GGGAGAAACCAAGCAATTTT+AGG | - | chr7_4:27108148-27108167 | None:intergenic | 40.0% |
| !! | GAGTTTGTTGATCGTCATGG+TGG | - | chr7_4:27102496-27102515 | None:intergenic | 45.0% |
| !! | GAGGAGTTTGTTGATCGTCA+TGG | - | chr7_4:27102499-27102518 | None:intergenic | 45.0% |
| GATCGGATTGATGTGAGGAT+GGG | - | chr7_4:27102552-27102571 | None:intergenic | 45.0% | |
| CGATCGTAGATCATGACGTT+CGG | - | chr7_4:27102648-27102667 | None:intergenic | 45.0% | |
| GAACCGAATTTGAGGAAACG+TGG | - | chr7_4:27102720-27102739 | None:intergenic | 45.0% | |
| AGAGTTGTGATGCGAGTTTC+AGG | - | chr7_4:27102786-27102805 | None:intergenic | 45.0% | |
| ! | TTTGAGACGGAGGAGAGTAA+TGG | + | chr7_4:27102891-27102910 | Msa1147690:CDS | 45.0% |
| TGATATTTAAGGGGACGGAG+AGG | + | chr7_4:27102937-27102956 | Msa1147690:CDS | 45.0% | |
| GAGGAGATTGAGAATATGGG+TGG | + | chr7_4:27102981-27103000 | Msa1147690:CDS | 45.0% | |
| ! | GCCTGTTGCGTTGGATATTT+TGG | + | chr7_4:27103070-27103089 | Msa1147690:CDS | 45.0% |
| GCCAAAATATCCAACGCAAC+AGG | - | chr7_4:27103074-27103093 | None:intergenic | 45.0% | |
| ! | TTGTGGGATTTTGGGCTGTT+TGG | + | chr7_4:27103441-27103460 | Msa1147690:intron | 45.0% |
| ! | GGATTTTGGGCTGTTTGGAT+TGG | + | chr7_4:27103446-27103465 | Msa1147690:intron | 45.0% |
| CTGTCAGCTATTCTCAGCAA+AGG | - | chr7_4:27103615-27103634 | None:intergenic | 45.0% | |
| CTTTGCTGAGAATAGCTGAC+AGG | + | chr7_4:27103613-27103632 | Msa1147690:intron | 45.0% | |
| ! | TCCCAAAATGGTTCTGCCAA+GGG | - | chr7_4:27104328-27104347 | None:intergenic | 45.0% |
| AGACACATTACACTGCTCCT+AGG | + | chr7_4:27104400-27104419 | Msa1147690:CDS | 45.0% | |
| ACATTACACTGCTCCTAGGA+TGG | + | chr7_4:27104404-27104423 | Msa1147690:CDS | 45.0% | |
| AAGAACGAGCTTCAGAACCA+TGG | - | chr7_4:27104480-27104499 | None:intergenic | 45.0% | |
| CCACACAGAAAACAGACATC+AGG | - | chr7_4:27104560-27104579 | None:intergenic | 45.0% | |
| ! | CCTGATGTCTGTTTTCTGTG+TGG | + | chr7_4:27104557-27104576 | Msa1147690:intron | 45.0% |
| TTCAAGGTGATAGCTGCATC+TGG | + | chr7_4:27104588-27104607 | Msa1147690:intron | 45.0% | |
| !! | GGTGGGATTTGTTGACAACT+TGG | - | chr7_4:27104661-27104680 | None:intergenic | 45.0% |
| TTCAACCAACTGAGTTGCTG+TGG | - | chr7_4:27104682-27104701 | None:intergenic | 45.0% | |
| ATGGTCATGCAAGCAATGCT+GGG | + | chr7_4:27104915-27104934 | Msa1147690:CDS | 45.0% | |
| GGTTCTTGGAATAAGACAGC+AGG | + | chr7_4:27104936-27104955 | Msa1147690:CDS | 45.0% | |
| TCTTGGAATAAGACAGCAGG+AGG | + | chr7_4:27104939-27104958 | Msa1147690:CDS | 45.0% | |
| CTTGGAATAAGACAGCAGGA+GGG | + | chr7_4:27104940-27104959 | Msa1147690:CDS | 45.0% | |
| TTGGAATAAGACAGCAGGAG+GGG | + | chr7_4:27104941-27104960 | Msa1147690:CDS | 45.0% | |
| AGCAGGAGGGGAAAACATAT+GGG | + | chr7_4:27104953-27104972 | Msa1147690:CDS | 45.0% | |
| AAGACCCGTGTCCTTGTAAT+TGG | - | chr7_4:27105135-27105154 | None:intergenic | 45.0% | |
| ! | TACAAGGACACGGGTCTTTT+TGG | + | chr7_4:27105137-27105156 | Msa1147690:CDS | 45.0% |
| TGGTGTTTATGCTGTCGCTA+AGG | + | chr7_4:27105157-27105176 | Msa1147690:CDS | 45.0% | |
| GACATTCCATGTCTTCCTCT+TGG | - | chr7_4:27105268-27105287 | None:intergenic | 45.0% | |
| ! | GACAACCAAGTTGGCTTATC+AGG | + | chr7_4:27106109-27106128 | Msa1147690:CDS | 45.0% |
| ! | GTTGGCTTATCAGGTTTCAG+AGG | + | chr7_4:27106118-27106137 | Msa1147690:CDS | 45.0% |
| TAGTGATCACGTTTGTGACC+TGG | + | chr7_4:27106721-27106740 | Msa1147690:intron | 45.0% | |
| TCGCTTCTGCTTCACATTGA+TGG | + | chr7_4:27107324-27107343 | Msa1147690:CDS | 45.0% | |
| ! | GATGTTGCTATTGCTGCCAT+GGG | + | chr7_4:27107828-27107847 | Msa1147690:CDS | 45.0% |
| TAAACGCTGAATAGGTCCCA+TGG | - | chr7_4:27107847-27107866 | None:intergenic | 45.0% | |
| CGTCTGAACCAGTTGTAATC+AGG | - | chr7_4:27107870-27107889 | None:intergenic | 45.0% | |
| GAACTAATAGCGGTTCCAGT+AGG | - | chr7_4:27107898-27107917 | None:intergenic | 45.0% | |
| ACTCCATATATGCCTCTGGA+TGG | + | chr7_4:27107979-27107998 | Msa1147690:three_prime_UTR | 45.0% | |
| TCAAAAGAGACCAGAAGCCA+GGG | - | chr7_4:27108179-27108198 | None:intergenic | 45.0% | |
| !!! | TTTCTTTTAATATATAAATA+TGG | + | chr7_4:27104527-27104546 | Msa1147690:intron | 5.0% |
| !! | TGTGGCTAGGGTTTGGTTTG+GGG | - | chr7_4:27102458-27102477 | None:intergenic | 50.0% |
| ! | GTGTGGCTAGGGTTTGGTTT+GGG | - | chr7_4:27102459-27102478 | None:intergenic | 50.0% |
| ! | TGTGTGGCTAGGGTTTGGTT+TGG | - | chr7_4:27102460-27102479 | None:intergenic | 50.0% |
| AACCAAACCCTAGCCACACA+CGG | + | chr7_4:27102460-27102479 | Msa1147690:five_prime_UTR | 50.0% | |
| ! | GTTGATCGTCATGGTGGAGA+GGG | - | chr7_4:27102490-27102509 | None:intergenic | 50.0% |
| ! | TGTTGATCGTCATGGTGGAG+AGG | - | chr7_4:27102491-27102510 | None:intergenic | 50.0% |
| GGATCGGATTGATGTGAGGA+TGG | - | chr7_4:27102553-27102572 | None:intergenic | 50.0% | |
| TAGATCATGACGTTCGGAGG+TGG | - | chr7_4:27102642-27102661 | None:intergenic | 50.0% | |
| TCGTAGATCATGACGTTCGG+AGG | - | chr7_4:27102645-27102664 | None:intergenic | 50.0% | |
| !! | TGGTCACGGATTTCGGGTTT+AGG | - | chr7_4:27102744-27102763 | None:intergenic | 50.0% |
| TCGTGTGTGGTCACGGATTT+CGG | - | chr7_4:27102751-27102770 | None:intergenic | 50.0% | |
| AGAGGATTCGTGTGTGGTCA+CGG | - | chr7_4:27102758-27102777 | None:intergenic | 50.0% | |
| TGTGATGCGAGTTTCAGGAG+CGG | - | chr7_4:27102781-27102800 | None:intergenic | 50.0% | |
| CGCATCACAACTCTCCCTAA+CGG | + | chr7_4:27102792-27102811 | Msa1147690:CDS | 50.0% | |
| !! | TGCCGGTTCGAGATTTGAGA+CGG | + | chr7_4:27102878-27102897 | Msa1147690:CDS | 50.0% |
| CTCCGTCTCAAATCTCGAAC+CGG | - | chr7_4:27102883-27102902 | None:intergenic | 50.0% | |
| TATTTAAGGGGACGGAGAGG+AGG | + | chr7_4:27102940-27102959 | Msa1147690:CDS | 50.0% | |
| GAATGCGAGGGATTTGGAAG+AGG | + | chr7_4:27102962-27102981 | Msa1147690:CDS | 50.0% | |
| TGAGAGCAACTCTACTGACC+CGG | - | chr7_4:27103788-27103807 | None:intergenic | 50.0% | |
| GTCAGTAGAGTTGCTCTCAC+AGG | + | chr7_4:27103789-27103808 | Msa1147690:intron | 50.0% | |
| GTAGAGTTGCTCTCACAGGT+CGG | + | chr7_4:27103793-27103812 | Msa1147690:intron | 50.0% | |
| TCGGTGGGTCAGTTGTTACT+GGG | - | chr7_4:27103924-27103943 | None:intergenic | 50.0% | |
| ATCGGTGGGTCAGTTGTTAC+TGG | - | chr7_4:27103925-27103944 | None:intergenic | 50.0% | |
| ! | AAGGGGAGTGTACTGGAAAG+CGG | - | chr7_4:27104310-27104329 | None:intergenic | 50.0% |
| ! | TCCCCTTGGCAGAACCATTT+TGG | + | chr7_4:27104323-27104342 | Msa1147690:CDS | 50.0% |
| ! | CCCAAAATGGTTCTGCCAAG+GGG | - | chr7_4:27104327-27104346 | None:intergenic | 50.0% |
| ! | CCCCTTGGCAGAACCATTTT+GGG | + | chr7_4:27104324-27104343 | Msa1147690:CDS | 50.0% |
| ! | GTCCCAAAATGGTTCTGCCA+AGG | - | chr7_4:27104329-27104348 | None:intergenic | 50.0% |
| ! | GTTCTGAGCAGGTCCCAAAA+TGG | - | chr7_4:27104340-27104359 | None:intergenic | 50.0% |
| !! | CTGTGTGGGTCTGCTTTTCA+AGG | + | chr7_4:27104572-27104591 | Msa1147690:intron | 50.0% |
| ACCAACTGAGTTGCTGTGGT+GGG | - | chr7_4:27104678-27104697 | None:intergenic | 50.0% | |
| AACCAACTGAGTTGCTGTGG+TGG | - | chr7_4:27104679-27104698 | None:intergenic | 50.0% | |
| GCTACCGCAAATTGTGCAAG+AGG | - | chr7_4:27104852-27104871 | None:intergenic | 50.0% | |
| GATGGTCATGCAAGCAATGC+TGG | + | chr7_4:27104914-27104933 | Msa1147690:CDS | 50.0% | |
| TGCAAGCAATGCTGGGTTCT+TGG | + | chr7_4:27104922-27104941 | Msa1147690:CDS | 50.0% | |
| CAGCAGGAGGGGAAAACATA+TGG | + | chr7_4:27104952-27104971 | Msa1147690:CDS | 50.0% | |
| GCAGGAGGGGAAAACATATG+GGG | + | chr7_4:27104954-27104973 | Msa1147690:CDS | 50.0% | |
| GCAAACCCAAGAGGAAGACA+TGG | + | chr7_4:27105259-27105278 | Msa1147690:intron | 50.0% | |
| GACAGATCATCCAAGCAGTC+CGG | - | chr7_4:27106071-27106090 | None:intergenic | 50.0% | |
| ! | GGATGTTGCTATTGCTGCCA+TGG | + | chr7_4:27107827-27107846 | Msa1147690:intron | 50.0% |
| ! | AGGCCATCCAGAGGCATATA+TGG | - | chr7_4:27107985-27108004 | None:intergenic | 50.0% |
| CTCAAAAGAGACCAGAAGCC+AGG | - | chr7_4:27108180-27108199 | None:intergenic | 50.0% | |
| ! | CTGGCTTCTGGTCTCTTTTG+AGG | + | chr7_4:27108178-27108197 | Msa1147690:three_prime_UTR | 50.0% |
| !! | GTGGCTAGGGTTTGGTTTGG+GGG | - | chr7_4:27102457-27102476 | None:intergenic | 55.0% |
| ACCAAACCCTAGCCACACAC+GGG | + | chr7_4:27102461-27102480 | Msa1147690:five_prime_UTR | 55.0% | |
| ! | TGGCGGATCGGATTGATGTG+AGG | - | chr7_4:27102557-27102576 | None:intergenic | 55.0% |
| TCATGACGTTCGGAGGTGGT+GGG | - | chr7_4:27102638-27102657 | None:intergenic | 55.0% | |
| ATCATGACGTTCGGAGGTGG+TGG | - | chr7_4:27102639-27102658 | None:intergenic | 55.0% | |
| CGTGTGTGGTCACGGATTTC+GGG | - | chr7_4:27102750-27102769 | None:intergenic | 55.0% | |
| TGAGCTAAGGCTAGACTCCG+TGG | - | chr7_4:27102829-27102848 | None:intergenic | 55.0% | |
| !! | CGGAGTCTAGCCTTAGCTCA+AGG | + | chr7_4:27102829-27102848 | Msa1147690:CDS | 55.0% |
| CGGTAGCAGTCCTTGAGCTA+AGG | - | chr7_4:27102842-27102861 | None:intergenic | 55.0% | |
| AGCTCAAGGACTGCTACCGT+TGG | + | chr7_4:27102843-27102862 | Msa1147690:CDS | 55.0% | |
| GCTCAAGGACTGCTACCGTT+GGG | + | chr7_4:27102844-27102863 | Msa1147690:CDS | 55.0% | |
| CTCAAGGACTGCTACCGTTG+GGG | + | chr7_4:27102845-27102864 | Msa1147690:CDS | 55.0% | |
| !! | GGCATCGATCCAAACCCCAA+CGG | - | chr7_4:27102862-27102881 | None:intergenic | 55.0% |
| GTTGGGGTTTGGATCGATGC+CGG | + | chr7_4:27102861-27102880 | Msa1147690:CDS | 55.0% | |
| ! | CGGTTCGAGATTTGAGACGG+AGG | + | chr7_4:27102881-27102900 | Msa1147690:CDS | 55.0% |
| GAGGAGGAATGCGAGGGATT+TGG | + | chr7_4:27102956-27102975 | Msa1147690:CDS | 55.0% | |
| GGTGGGTCAGTTGTTACTGG+GGG | - | chr7_4:27103922-27103941 | None:intergenic | 55.0% | |
| CGGTGGGTCAGTTGTTACTG+GGG | - | chr7_4:27103923-27103942 | None:intergenic | 55.0% | |
| ! | GTAGGTTGAGGGCCAAACAG+AGG | + | chr7_4:27104257-27104276 | Msa1147690:intron | 55.0% |
| ACTGGAAAGCGGTTGCGTGT+AGG | - | chr7_4:27104299-27104318 | None:intergenic | 55.0% | |
| GCTTTCCAGTACACTCCCCT+TGG | + | chr7_4:27104309-27104328 | Msa1147690:CDS | 55.0% | |
| ! | TTCTGCCAAGGGGAGTGTAC+TGG | - | chr7_4:27104317-27104336 | None:intergenic | 55.0% |
| TCCCACCACAGCAACTCAGT+TGG | + | chr7_4:27104674-27104693 | Msa1147690:CDS | 55.0% | |
| TCTGAGCTAGCACAGCGAGT+TGG | + | chr7_4:27105071-27105090 | Msa1147690:CDS | 55.0% | |
| AGCTCGCATGCAAACCCAAG+AGG | + | chr7_4:27105250-27105269 | Msa1147690:intron | 55.0% | |
| TGTTACGCGTGCTCGCAATC+AGG | + | chr7_4:27106145-27106164 | Msa1147690:CDS | 55.0% | |
| GATCACGTTTGTGACCTGGC+TGG | + | chr7_4:27106725-27106744 | Msa1147690:intron | 55.0% | |
| GGTTCAGACGCAGAACCTAC+TGG | + | chr7_4:27107880-27107899 | Msa1147690:CDS | 55.0% | |
| TGCCTCTGGATGGCCTGTTT+AGG | + | chr7_4:27107989-27108008 | Msa1147690:three_prime_UTR | 55.0% | |
| AAGAGACCAGAAGCCAGGGT+GGG | - | chr7_4:27108175-27108194 | None:intergenic | 55.0% | |
| AAAGAGACCAGAAGCCAGGG+TGG | - | chr7_4:27108176-27108195 | None:intergenic | 55.0% | |
| !! | ATGAACGGCGGACTAGGGTG+AGG | - | chr7_4:27102518-27102537 | None:intergenic | 60.0% |
| ATGTGAGGATGGGTGTCCGC+CGG | - | chr7_4:27102542-27102561 | None:intergenic | 60.0% | |
| !! | AGGTGGAGAGAGTGGCGGAT+CGG | - | chr7_4:27102569-27102588 | None:intergenic | 60.0% |
| CATGACGTTCGGAGGTGGTG+GGG | - | chr7_4:27102637-27102656 | None:intergenic | 60.0% | |
| GAGCGGAGAGGATTCGTGTG+TGG | - | chr7_4:27102764-27102783 | None:intergenic | 60.0% | |
| TGCGAGTTTCAGGAGCGGAG+AGG | - | chr7_4:27102776-27102795 | None:intergenic | 60.0% | |
| TGGCGACACGGAGTCCGTTA+GGG | - | chr7_4:27102809-27102828 | None:intergenic | 60.0% | |
| !! | TAACGGACTCCGTGTCGCCA+CGG | + | chr7_4:27102809-27102828 | Msa1147690:CDS | 60.0% |
| GGACTGCTACCGTTGGGGTT+TGG | + | chr7_4:27102850-27102869 | Msa1147690:CDS | 60.0% | |
| GACGGAGAGGAGGAATGCGA+GGG | + | chr7_4:27102950-27102969 | Msa1147690:CDS | 60.0% | |
| AGGGGATGTGCCTGTTGCGT+TGG | + | chr7_4:27103061-27103080 | Msa1147690:CDS | 60.0% | |
| GGGTCAGTTGTTACTGGGGG+TGG | - | chr7_4:27103919-27103938 | None:intergenic | 60.0% | |
| GGAAAGCGGTTGCGTGTAGG+TGG | - | chr7_4:27104296-27104315 | None:intergenic | 60.0% | |
| ACGCGTGCTCGCAATCAGGT+AGG | + | chr7_4:27106149-27106168 | Msa1147690:intron | 60.0% | |
| GGCCTAAACAGGCCATCCAG+AGG | - | chr7_4:27107994-27108013 | None:intergenic | 60.0% | |
| AGAGACCAGAAGCCAGGGTG+GGG | - | chr7_4:27108174-27108193 | None:intergenic | 60.0% | |
| GCCCGTGTGTGGCTAGGGTT+TGG | - | chr7_4:27102465-27102484 | None:intergenic | 65.0% | |
| !! | CCGGGATGAACGGCGGACTA+GGG | - | chr7_4:27102523-27102542 | None:intergenic | 65.0% |
| CCCTAGTCCGCCGTTCATCC+CGG | + | chr7_4:27102520-27102539 | Msa1147690:CDS | 65.0% | |
| TAGTCCGCCGTTCATCCCGG+CGG | + | chr7_4:27102523-27102542 | Msa1147690:CDS | 65.0% | |
| TGGGTGTCCGCCGGGATGAA+CGG | - | chr7_4:27102533-27102552 | None:intergenic | 65.0% | |
| TGTGAGGATGGGTGTCCGCC+GGG | - | chr7_4:27102541-27102560 | None:intergenic | 65.0% | |
| AGCGGAGGTGGAGAGAGTGG+CGG | - | chr7_4:27102574-27102593 | None:intergenic | 65.0% | |
| TGAAGGGGGTGAGCGGGTGA+CGG | - | chr7_4:27102604-27102623 | None:intergenic | 65.0% | |
| TGGGGAAGGGGGTGGTGAAG+GGG | - | chr7_4:27102619-27102638 | None:intergenic | 65.0% | |
| GTGGGGAAGGGGGTGGTGAA+GGG | - | chr7_4:27102620-27102639 | None:intergenic | 65.0% | |
| !! | TTCGGAGGTGGTGGGGAAGG+GGG | - | chr7_4:27102630-27102649 | None:intergenic | 65.0% |
| !! | GTTCGGAGGTGGTGGGGAAG+GGG | - | chr7_4:27102631-27102650 | None:intergenic | 65.0% |
| !! | CGTTCGGAGGTGGTGGGGAA+GGG | - | chr7_4:27102632-27102651 | None:intergenic | 65.0% |
| !! | ACGTTCGGAGGTGGTGGGGA+AGG | - | chr7_4:27102633-27102652 | None:intergenic | 65.0% |
| GTGGCGACACGGAGTCCGTT+AGG | - | chr7_4:27102810-27102829 | None:intergenic | 65.0% | |
| GGCTAGACTCCGTGGCGACA+CGG | - | chr7_4:27102821-27102840 | None:intergenic | 65.0% | |
| GGACGGAGAGGAGGAATGCG+AGG | + | chr7_4:27102949-27102968 | Msa1147690:CDS | 65.0% | |
| GTGCTCTCAGCCGGACTGCT+TGG | + | chr7_4:27106058-27106077 | Msa1147690:intron | 65.0% | |
| GTTTCTCCCGAACCCCACCC+TGG | + | chr7_4:27108159-27108178 | Msa1147690:three_prime_UTR | 65.0% | |
| CAGAAGCCAGGGTGGGGTTC+GGG | - | chr7_4:27108168-27108187 | None:intergenic | 65.0% | |
| CCAGAAGCCAGGGTGGGGTT+CGG | - | chr7_4:27108169-27108188 | None:intergenic | 65.0% | |
| GGGCTGCCCGTGTGTGGCTA+GGG | - | chr7_4:27102470-27102489 | None:intergenic | 70.0% | |
| AGGGCTGCCCGTGTGTGGCT+AGG | - | chr7_4:27102471-27102490 | None:intergenic | 70.0% | |
| TGGAGAGGGCTGCCCGTGTG+TGG | - | chr7_4:27102476-27102495 | None:intergenic | 70.0% | |
| ! | GCCGGGATGAACGGCGGACT+AGG | - | chr7_4:27102524-27102543 | None:intergenic | 70.0% |
| GTGTCCGCCGGGATGAACGG+CGG | - | chr7_4:27102530-27102549 | None:intergenic | 70.0% | |
| GGCAGCGGAGGTGGAGAGAG+TGG | - | chr7_4:27102577-27102596 | None:intergenic | 70.0% | |
| AAGGGGGTGAGCGGGTGACG+GGG | - | chr7_4:27102602-27102621 | None:intergenic | 70.0% | |
| GAAGGGGGTGAGCGGGTGAC+GGG | - | chr7_4:27102603-27102622 | None:intergenic | 70.0% | |
| GGGTGGTGAAGGGGGTGAGC+GGG | - | chr7_4:27102610-27102629 | None:intergenic | 70.0% | |
| GGGGTGGTGAAGGGGGTGAG+CGG | - | chr7_4:27102611-27102630 | None:intergenic | 70.0% | |
| GGGGAAGGGGGTGGTGAAGG+GGG | - | chr7_4:27102618-27102637 | None:intergenic | 70.0% | |
| GGTGGGGAAGGGGGTGGTGA+AGG | - | chr7_4:27102621-27102640 | None:intergenic | 70.0% | |
| CCGAACCCCACCCTGGCTTC+TGG | + | chr7_4:27108166-27108185 | Msa1147690:three_prime_UTR | 70.0% | |
| ! | AGGGGGTGAGCGGGTGACGG+GGG | - | chr7_4:27102601-27102620 | None:intergenic | 75.0% |
| !! | GGAGGTGGTGGGGAAGGGGG+TGG | - | chr7_4:27102627-27102646 | None:intergenic | 75.0% |
| !!! | GGGTGAGCGGGTGACGGGGG+CGG | - | chr7_4:27102598-27102617 | None:intergenic | 80.0% |
| ! | GACGGGGGCGGCAGCGGAGG+TGG | - | chr7_4:27102586-27102605 | None:intergenic | 85.0% |
| !!! | GGTGACGGGGGCGGCAGCGG+AGG | - | chr7_4:27102589-27102608 | None:intergenic | 85.0% |
| !!! | GCGGGTGACGGGGGCGGCAG+CGG | - | chr7_4:27102592-27102611 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 27102365 | 27108238 | 27102365 | ID=Msa1147690;Name=Msa1147690 |
| chr7_4 | mRNA | 27102365 | 27108238 | 27102365 | ID=Msa1147690-mRNA-1;Parent=Msa1147690;Name=Msa1147690-mRNA-1;_AED=0.06;_eAED=0.06;_QI=133|0.87|0.88|1|1|1|9|324|533 |
| chr7_4 | exon | 27102365 | 27103172 | 27102365 | ID=Msa1147690-mRNA-1:exon:6645;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27104261 | 27104425 | 27104261 | ID=Msa1147690-mRNA-1:exon:6646;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27104594 | 27104731 | 27104594 | ID=Msa1147690-mRNA-1:exon:6647;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27104825 | 27104979 | 27104825 | ID=Msa1147690-mRNA-1:exon:6648;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27105070 | 27105178 | 27105070 | ID=Msa1147690-mRNA-1:exon:6649;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27106068 | 27106166 | 27106068 | ID=Msa1147690-mRNA-1:exon:6650;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27107315 | 27107380 | 27107315 | ID=Msa1147690-mRNA-1:exon:6651;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27107633 | 27107740 | 27107633 | ID=Msa1147690-mRNA-1:exon:6652;Parent=Msa1147690-mRNA-1 |
| chr7_4 | exon | 27107828 | 27108238 | 27107828 | ID=Msa1147690-mRNA-1:exon:6653;Parent=Msa1147690-mRNA-1 |
| chr7_4 | five_prime_UTR | 27102365 | 27102497 | 27102365 | ID=Msa1147690-mRNA-1:five_prime_utr;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27102498 | 27103172 | 27102498 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27104261 | 27104425 | 27104261 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27104594 | 27104731 | 27104594 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27104825 | 27104979 | 27104825 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27105070 | 27105178 | 27105070 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27106068 | 27106166 | 27106068 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27107315 | 27107380 | 27107315 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27107633 | 27107740 | 27107633 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | CDS | 27107828 | 27107914 | 27107828 | ID=Msa1147690-mRNA-1:cds;Parent=Msa1147690-mRNA-1 |
| chr7_4 | three_prime_UTR | 27107915 | 27108238 | 27107915 | ID=Msa1147690-mRNA-1:three_prime_utr;Parent=Msa1147690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
