Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759470 | XP_003612424.1 | 84.173 | 278 | 5 | 2 | 1 | 239 | 41 | 318 | 1.16e-161 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759470 | sp|Q39242|TRXB2_ARATH | 69.485 | 272 | 44 | 2 | 7 | 239 | 54 | 325 | 3.71e-129 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759470 | G7K2L9 | 84.173 | 278 | 5 | 2 | 1 | 239 | 41 | 318 | 5.52e-162 | 462 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054730 | Msa0759470 | 0.830137 | 3.478446e-55 | -8.615850e-47 |
| Msa0106370 | Msa0759470 | 0.811948 | 5.422850e-51 | -8.615850e-47 |
| Msa0607750 | Msa0759470 | 0.811352 | 7.307622e-51 | -8.615850e-47 |
| Msa0759470 | Msa0923260 | 0.865650 | 5.063235e-65 | -8.615850e-47 |
| Msa0759470 | Msa0996830 | 0.835014 | 2.147339e-56 | -8.615850e-47 |
| Msa0759470 | Msa1069840 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0759470 | Msa1314110 | 0.802555 | 5.307222e-49 | -8.615850e-47 |
| Msa0153000 | Msa0759470 | 0.822311 | 2.535554e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759470 | MtrunA17_Chr5g0407541 | 84.173 | 278 | 5 | 2 | 1 | 239 | 41 | 318 | 1.06e-165 | 462 |
| Msa0759470 | MtrunA17_Chr1g0173181 | 43.609 | 266 | 105 | 5 | 14 | 240 | 71 | 330 | 6.39e-66 | 213 |
| Msa0759470 | MtrunA17_Chr6g0463311 | 77.358 | 53 | 12 | 0 | 94 | 146 | 2 | 54 | 1.26e-20 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759470 | AT2G17420.2 | 69.485 | 272 | 44 | 2 | 7 | 239 | 54 | 325 | 2.24e-130 | 373 |
| Msa0759470 | AT2G17420.1 | 69.485 | 272 | 44 | 2 | 7 | 239 | 54 | 325 | 3.77e-130 | 373 |
| Msa0759470 | AT4G35460.1 | 68.750 | 272 | 46 | 2 | 7 | 239 | 46 | 317 | 3.73e-119 | 345 |
| Msa0759470 | AT2G41680.1 | 43.396 | 265 | 105 | 5 | 14 | 239 | 86 | 344 | 3.85e-67 | 216 |
Find 94 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCTGATTTGAAGGTTTC+TGG | 0.081370 | 5_2:-15206350 | Msa0759470:CDS |
| TCACCGTAGGGATACGTTTC+GGG | 0.195051 | 5_2:-15206513 | Msa0759470:intron |
| TCTGGGTTGTTCTTTGCAAT+TGG | 0.250878 | 5_2:-15206332 | Msa0759470:CDS |
| TCAATGGTGGTTGAGGCTTT+TGG | 0.297880 | 5_2:-15206431 | Msa0759470:CDS |
| TTCGGCACGGGCGGCGTATA+CGG | 0.300560 | 5_2:+15207006 | None:intergenic |
| TTTGAGTAATGACAAGATTA+AGG | 0.303621 | 5_2:-15206465 | Msa0759470:CDS |
| TACGGCGGCGGTGTGGGCGG+CGG | 0.303675 | 5_2:+15207024 | None:intergenic |
| ATGACAAGATTAAGGTGATT+TGG | 0.304348 | 5_2:-15206457 | Msa0759470:CDS |
| ACGGCGGCGGTGTGGGCGGC+GGG | 0.304944 | 5_2:+15207025 | None:intergenic |
| CTGGGTTGTTCTTTGCAATT+GGG | 0.312403 | 5_2:-15206331 | Msa0759470:CDS |
| GAGGATTCCGTCGGGGAAAC+CGG | 0.355019 | 5_2:+15206895 | None:intergenic |
| TTTGACGGTGGGGAGGGTGG+TGG | 0.362536 | 5_2:+15207075 | None:intergenic |
| TTTCTGATTTGAAGGTTTCT+GGG | 0.369720 | 5_2:-15206349 | Msa0759470:CDS |
| TTCACCGTAGGGATACGTTT+CGG | 0.376202 | 5_2:-15206514 | Msa0759470:intron |
| CGAATTTAGCGGACTGTTGA+CGG | 0.378754 | 5_2:+15206849 | None:intergenic |
| GTGATGGTCCTAATGGTTAC+TGG | 0.379009 | 5_2:-15206679 | Msa0759470:CDS |
| GGCGTATACGGCGGCGGTGT+GGG | 0.386511 | 5_2:+15207018 | None:intergenic |
| CTTTGCAATTGGGCATGAAC+CGG | 0.389279 | 5_2:-15206321 | Msa0759470:CDS |
| CGGCGGCGGTGTGGGCGGCG+GGG | 0.394828 | 5_2:+15207026 | None:intergenic |
| GTGGTGGTGAGTTGGCCTCC+TGG | 0.410776 | 5_2:+15206938 | None:intergenic |
| GAGGGTGGTGGTGTCAGTCA+TGG | 0.413863 | 5_2:+15207087 | None:intergenic |
| ATGGGGAGAATCAGAAGCTT+GGG | 0.415174 | 5_2:-15206406 | Msa0759470:CDS |
| AAAAGAGGTTTCTGATTTGA+AGG | 0.417001 | 5_2:-15206357 | Msa0759470:CDS |
| TAAGGTGATTTGGAATTCAA+TGG | 0.429889 | 5_2:-15206447 | Msa0759470:CDS |
| GATCTTTCGTAACAAACCTT+TGG | 0.430114 | 5_2:-15206612 | Msa0759470:CDS |
| ACGTACTGTTGAAGCTGATT+CGG | 0.431276 | 5_2:-15206753 | Msa0759470:CDS |
| CCGTTCACCGGCTCCGGTGA+TGG | 0.440754 | 5_2:-15206695 | Msa0759470:CDS |
| GAAGAGGATTGGTTTGAGTT+CGG | 0.442464 | 5_2:+15206988 | None:intergenic |
| CGGCGTATACGGCGGCGGTG+TGG | 0.452801 | 5_2:+15207017 | None:intergenic |
| CCACGGTTCCAGTAACCATT+AGG | 0.457528 | 5_2:+15206671 | None:intergenic |
| CGGTTACCGTTCACCGGCTC+CGG | 0.460678 | 5_2:-15206701 | Msa0759470:CDS |
| GGCTCCGGTGATGGTCCTAA+TGG | 0.460947 | 5_2:-15206686 | Msa0759470:CDS |
| AGGATTCCGTCGGGGAAACC+GGG | 0.463354 | 5_2:+15206896 | None:intergenic |
| TTTGTTTGAAGATGGTTTGA+TGG | 0.468884 | 5_2:-15205545 | Msa0759470:intron |
| GAAATTCTCGACGTCGGTTG+TGG | 0.469174 | 5_2:+15206919 | None:intergenic |
| ATCCATCCTTCGAAGAGGAT+TGG | 0.474710 | 5_2:+15206977 | None:intergenic |
| CCTAATGGTTACTGGAACCG+TGG | 0.480720 | 5_2:-15206671 | Msa0759470:CDS |
| AATCCTCGGCGGCGAACTCA+TGG | 0.487221 | 5_2:-15206879 | Msa0759470:CDS |
| ATGGCCAACGACATCGCTCC+AGG | 0.490028 | 5_2:-15206956 | Msa0759470:CDS |
| CAATTAGAGCTTGATTCTGA+TGG | 0.491874 | 5_2:-15206278 | Msa0759470:CDS |
| GCTTCCGATGATGCAGAGCT+TGG | 0.493321 | 5_2:+15207051 | None:intergenic |
| AACCAATCCTCTTCGAAGGA+TGG | 0.495853 | 5_2:-15206979 | Msa0759470:CDS |
| AAAACCAAGCTCTGCATCAT+CGG | 0.501798 | 5_2:-15207055 | Msa0759470:CDS |
| GGTTTCCCCGACGGAATCCT+CGG | 0.502701 | 5_2:-15206893 | Msa0759470:CDS |
| TTGGAATTCAATGGTGGTTG+AGG | 0.502804 | 5_2:-15206438 | Msa0759470:CDS |
| ACCGACGTCGAGAATTTCCC+CGG | 0.505352 | 5_2:-15206914 | Msa0759470:CDS |
| GGGTTTGAAGGTGGAGAATG+TGG | 0.506859 | 5_2:-15206384 | Msa0759470:CDS |
| ACGGGCGGCGTATACGGCGG+CGG | 0.506979 | 5_2:+15207012 | None:intergenic |
| ATTCTCGACGTCGGTTGTGG+TGG | 0.510476 | 5_2:+15206922 | None:intergenic |
| CCTTTGGCAGTGATCGGTGG+TGG | 0.516096 | 5_2:-15206596 | Msa0759470:CDS |
| GCGAAACGGTTACCGTTCAC+CGG | 0.516776 | 5_2:-15206707 | Msa0759470:CDS |
| GATTGGTTTGAGTTCGGCAC+GGG | 0.519127 | 5_2:+15206994 | None:intergenic |
| TCGCCGCCGAGGATTCCGTC+GGG | 0.521460 | 5_2:+15206887 | None:intergenic |
| AAGCTCTGCATCATCGGAAG+CGG | 0.527278 | 5_2:-15207049 | Msa0759470:CDS |
| TGGTTTGAGTTCGGCACGGG+CGG | 0.533615 | 5_2:+15206997 | None:intergenic |
| GATGGGGAGAATCAGAAGCT+TGG | 0.533966 | 5_2:-15206407 | Msa0759470:CDS |
| CTACCGGAGCTGTTGCGAAA+CGG | 0.536790 | 5_2:-15206721 | Msa0759470:CDS |
| GCCTCCTGGAGCGATGTCGT+TGG | 0.537048 | 5_2:+15206952 | None:intergenic |
| TAACCGTTTCGCAACAGCTC+CGG | 0.541587 | 5_2:+15206718 | None:intergenic |
| AACAAACCTTTGGCAGTGAT+CGG | 0.545138 | 5_2:-15206602 | Msa0759470:CDS |
| GTATACGGCGGCGGTGTGGG+CGG | 0.546275 | 5_2:+15207021 | None:intergenic |
| TTTGAAGATGGTTTGATGGA+AGG | 0.548073 | 5_2:-15205541 | Msa0759470:intron |
| AAAGGTTTGTTACGAAAGAT+CGG | 0.552657 | 5_2:+15206614 | None:intergenic |
| CGTCGGTTGTGGTGGTGAGT+TGG | 0.552760 | 5_2:+15206930 | None:intergenic |
| AATTAGAGCTTGATTCTGAT+GGG | 0.555648 | 5_2:-15206277 | Msa0759470:intron |
| AATTTCCCCGGTTTCCCCGA+CGG | 0.559331 | 5_2:-15206902 | Msa0759470:CDS |
| ATTAGGACCATCACCGGAGC+CGG | 0.560496 | 5_2:+15206688 | None:intergenic |
| GATTCGGTTATCGTCGCTAC+CGG | 0.565517 | 5_2:-15206737 | Msa0759470:CDS |
| TTCGAAGATTATGCAGAGCA+AGG | 0.572908 | 5_2:-15206489 | Msa0759470:CDS |
| AATCCTCTTCGAAGGATGGA+TGG | 0.574752 | 5_2:-15206975 | Msa0759470:CDS |
| CTCAAACCAATCCTCTTCGA+AGG | 0.575038 | 5_2:-15206983 | Msa0759470:CDS |
| TTCGCCGCCGAGGATTCCGT+CGG | 0.585796 | 5_2:+15206886 | None:intergenic |
| GGAGAATGTGGTGACAAAAG+AGG | 0.585967 | 5_2:-15206372 | Msa0759470:CDS |
| CGGTGGTGGAGATTCAGCTA+TGG | 0.589556 | 5_2:-15206582 | Msa0759470:CDS |
| CCATCACCGGAGCCGGTGAA+CGG | 0.597742 | 5_2:+15206695 | None:intergenic |
| GGCACGGGCGGCGTATACGG+CGG | 0.600378 | 5_2:+15207009 | None:intergenic |
| CCACCACCGATCACTGCCAA+AGG | 0.613847 | 5_2:+15206596 | None:intergenic |
| TGGTGGAGATTCAGCTATGG+AGG | 0.616555 | 5_2:-15206579 | Msa0759470:CDS |
| CTAATGGTTACTGGAACCGT+GGG | 0.623174 | 5_2:-15206670 | Msa0759470:CDS |
| TCAGCTTGTGCTGTATGTGA+CGG | 0.630662 | 5_2:-15206644 | Msa0759470:CDS |
| GGATTCCGTCGGGGAAACCG+GGG | 0.631914 | 5_2:+15206897 | None:intergenic |
| GGTGATTTGGAATTCAATGG+TGG | 0.638272 | 5_2:-15206444 | Msa0759470:CDS |
| GTTCCATGAGTTCGCCGCCG+AGG | 0.639562 | 5_2:+15206876 | None:intergenic |
| TGGGGAGAATCAGAAGCTTG+GGG | 0.640652 | 5_2:-15206405 | Msa0759470:CDS |
| TGGCCATCCATCCTTCGAAG+AGG | 0.649138 | 5_2:+15206972 | None:intergenic |
| GGGGAGAATCAGAAGCTTGG+GGG | 0.655199 | 5_2:-15206404 | Msa0759470:CDS |
| AAACCTTTGGCAGTGATCGG+TGG | 0.660900 | 5_2:-15206599 | Msa0759470:CDS |
| GGATTGGTTTGAGTTCGGCA+CGG | 0.665823 | 5_2:+15206993 | None:intergenic |
| CGCCGCCGAGGATTCCGTCG+GGG | 0.669377 | 5_2:+15206888 | None:intergenic |
| GTAACCATTAGGACCATCAC+CGG | 0.674090 | 5_2:+15206682 | None:intergenic |
| CAGCACAAGCTGAAATCCCA+CGG | 0.675347 | 5_2:+15206654 | None:intergenic |
| ACCGGGGAAATTCTCGACGT+CGG | 0.686945 | 5_2:+15206913 | None:intergenic |
| TTCCCCGACGGAATCCTCGG+CGG | 0.691557 | 5_2:-15206890 | Msa0759470:CDS |
| GCCAACGACATCGCTCCAGG+AGG | 0.696880 | 5_2:-15206953 | Msa0759470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAATAACCAACAATA+AGG | + | chr5_2:15206781-15206800 | None:intergenic | 15.0% |
| !! | TTAAATAATAACCAACAATA+AGG | + | chr5_2:15206781-15206800 | None:intergenic | 15.0% |
| !!! | TAGTTCATTATTCATTTTAG+AGG | - | chr5_2:15206641-15206660 | Msa0759470:CDS | 20.0% |
| !! | TGGTTATTATTTAAGAGAAT+TGG | - | chr5_2:15206787-15206806 | Msa0759470:intron | 20.0% |
| !! | ATTACTTATGAGTTTATCTA+AGG | - | chr5_2:15206953-15206972 | Msa0759470:CDS | 20.0% |
| !!! | TAGTTCATTATTCATTTTAG+AGG | - | chr5_2:15206641-15206660 | Msa0759470:CDS | 20.0% |
| !! | TGGTTATTATTTAAGAGAAT+TGG | - | chr5_2:15206787-15206806 | Msa0759470:intron | 20.0% |
| !! | ATTACTTATGAGTTTATCTA+AGG | - | chr5_2:15206953-15206972 | Msa0759470:CDS | 20.0% |
| ! | TTTGAGTAATGACAAGATTA+AGG | - | chr5_2:15206137-15206156 | Msa0759470:intron | 25.0% |
| !!! | ATATAGCTATTTTATAACCC+AGG | + | chr5_2:15206695-15206714 | None:intergenic | 25.0% |
| ! | ATGTTATCTTAAATGTGGTA+GGG | - | chr5_2:15206852-15206871 | Msa0759470:intron | 25.0% |
| ! | ACAAAAACAGAATATGAACA+TGG | + | chr5_2:15207042-15207061 | None:intergenic | 25.0% |
| !!! | ATTCTGTTTTTGTTTGAAGA+TGG | - | chr5_2:15207049-15207068 | Msa0759470:CDS | 25.0% |
| ! | TTTGAGTAATGACAAGATTA+AGG | - | chr5_2:15206137-15206156 | Msa0759470:intron | 25.0% |
| !!! | ATATAGCTATTTTATAACCC+AGG | + | chr5_2:15206695-15206714 | None:intergenic | 25.0% |
| ! | ATGTTATCTTAAATGTGGTA+GGG | - | chr5_2:15206852-15206871 | Msa0759470:intron | 25.0% |
| ! | ACAAAAACAGAATATGAACA+TGG | + | chr5_2:15207042-15207061 | None:intergenic | 25.0% |
| !!! | ATTCTGTTTTTGTTTGAAGA+TGG | - | chr5_2:15207049-15207068 | Msa0759470:CDS | 25.0% |
| !! | AAAGGTTTGTTACGAAAGAT+CGG | + | chr5_2:15205991-15206010 | None:intergenic | 30.0% |
| ! | GCAACGTTTTTGACAAAATA+CGG | - | chr5_2:15206048-15206067 | Msa0759470:intron | 30.0% |
| ATGACAAGATTAAGGTGATT+TGG | - | chr5_2:15206145-15206164 | Msa0759470:intron | 30.0% | |
| ! | TAAGGTGATTTGGAATTCAA+TGG | - | chr5_2:15206155-15206174 | Msa0759470:intron | 30.0% |
| ! | AAAAGAGGTTTCTGATTTGA+AGG | - | chr5_2:15206245-15206264 | Msa0759470:intron | 30.0% |
| ! | TTTCTGATTTGAAGGTTTCT+GGG | - | chr5_2:15206253-15206272 | Msa0759470:intron | 30.0% |
| AATTAGAGCTTGATTCTGAT+GGG | - | chr5_2:15206325-15206344 | Msa0759470:CDS | 30.0% | |
| ! | ATAATTACATGTGTTGACAC+CGG | - | chr5_2:15206590-15206609 | Msa0759470:CDS | 30.0% |
| TGCTTAGTTGTTATATCTGA+TGG | - | chr5_2:15206752-15206771 | Msa0759470:CDS | 30.0% | |
| AAGCTTGGTTTAACACTAAA+TGG | + | chr5_2:15206828-15206847 | None:intergenic | 30.0% | |
| ATTTAGTGTTAAACCAAGCT+TGG | - | chr5_2:15206827-15206846 | Msa0759470:intron | 30.0% | |
| TGGAGATGTTATCTTAAATG+TGG | - | chr5_2:15206847-15206866 | Msa0759470:intron | 30.0% | |
| GATGTTATCTTAAATGTGGT+AGG | - | chr5_2:15206851-15206870 | Msa0759470:intron | 30.0% | |
| ACTTATGAGTTTATCTAAGG+TGG | - | chr5_2:15206956-15206975 | Msa0759470:CDS | 30.0% | |
| TGTTTATTGGTGTATATGAC+TGG | - | chr5_2:15206981-15207000 | Msa0759470:CDS | 30.0% | |
| ! | TGACTGGTATTGAAATGTAA+TGG | - | chr5_2:15206997-15207016 | Msa0759470:CDS | 30.0% |
| TTTGTTTGAAGATGGTTTGA+TGG | - | chr5_2:15207057-15207076 | Msa0759470:CDS | 30.0% | |
| !! | AAAGGTTTGTTACGAAAGAT+CGG | + | chr5_2:15205991-15206010 | None:intergenic | 30.0% |
| ! | GCAACGTTTTTGACAAAATA+CGG | - | chr5_2:15206048-15206067 | Msa0759470:intron | 30.0% |
| ATGACAAGATTAAGGTGATT+TGG | - | chr5_2:15206145-15206164 | Msa0759470:intron | 30.0% | |
| ! | TAAGGTGATTTGGAATTCAA+TGG | - | chr5_2:15206155-15206174 | Msa0759470:intron | 30.0% |
| ! | AAAAGAGGTTTCTGATTTGA+AGG | - | chr5_2:15206245-15206264 | Msa0759470:intron | 30.0% |
| ! | TTTCTGATTTGAAGGTTTCT+GGG | - | chr5_2:15206253-15206272 | Msa0759470:intron | 30.0% |
| AATTAGAGCTTGATTCTGAT+GGG | - | chr5_2:15206325-15206344 | Msa0759470:CDS | 30.0% | |
| ! | ATAATTACATGTGTTGACAC+CGG | - | chr5_2:15206590-15206609 | Msa0759470:CDS | 30.0% |
| TGCTTAGTTGTTATATCTGA+TGG | - | chr5_2:15206752-15206771 | Msa0759470:CDS | 30.0% | |
| AAGCTTGGTTTAACACTAAA+TGG | + | chr5_2:15206828-15206847 | None:intergenic | 30.0% | |
| ATTTAGTGTTAAACCAAGCT+TGG | - | chr5_2:15206827-15206846 | Msa0759470:intron | 30.0% | |
| TGGAGATGTTATCTTAAATG+TGG | - | chr5_2:15206847-15206866 | Msa0759470:intron | 30.0% | |
| GATGTTATCTTAAATGTGGT+AGG | - | chr5_2:15206851-15206870 | Msa0759470:intron | 30.0% | |
| ACTTATGAGTTTATCTAAGG+TGG | - | chr5_2:15206956-15206975 | Msa0759470:CDS | 30.0% | |
| TGTTTATTGGTGTATATGAC+TGG | - | chr5_2:15206981-15207000 | Msa0759470:CDS | 30.0% | |
| ! | TGACTGGTATTGAAATGTAA+TGG | - | chr5_2:15206997-15207016 | Msa0759470:CDS | 30.0% |
| TTTGTTTGAAGATGGTTTGA+TGG | - | chr5_2:15207057-15207076 | Msa0759470:CDS | 30.0% | |
| ATCAACCTTAGAAACCGTTT+CGG | + | chr5_2:15205794-15205813 | None:intergenic | 35.0% | |
| ! | ATTTCTCTTCTCGTCCTTTT+AGG | - | chr5_2:15205812-15205831 | Msa0759470:intron | 35.0% |
| ! | TTTCTCTTCTCGTCCTTTTA+GGG | - | chr5_2:15205813-15205832 | Msa0759470:intron | 35.0% |
| GATCTTTCGTAACAAACCTT+TGG | - | chr5_2:15205990-15206009 | Msa0759470:intron | 35.0% | |
| AAGTTTACATCATTCACCGT+AGG | - | chr5_2:15206076-15206095 | Msa0759470:intron | 35.0% | |
| AGTTTACATCATTCACCGTA+GGG | - | chr5_2:15206077-15206096 | Msa0759470:intron | 35.0% | |
| ! | GTTTCTGATTTGAAGGTTTC+TGG | - | chr5_2:15206252-15206271 | Msa0759470:intron | 35.0% |
| CAATTAGAGCTTGATTCTGA+TGG | - | chr5_2:15206324-15206343 | Msa0759470:CDS | 35.0% | |
| TATTGATGTTGACATGTCAG+TGG | + | chr5_2:15206542-15206561 | None:intergenic | 35.0% | |
| TCTGATGGAATCCTTATTGT+TGG | - | chr5_2:15206767-15206786 | Msa0759470:CDS | 35.0% | |
| TAAGATAACATCTCCAAGCT+TGG | + | chr5_2:15206843-15206862 | None:intergenic | 35.0% | |
| TTGTATAGACTGTGATAAGC+AGG | - | chr5_2:15206923-15206942 | Msa0759470:CDS | 35.0% | |
| ! | ATCTAAGGTGGAGTGTTTAT+TGG | - | chr5_2:15206968-15206987 | Msa0759470:CDS | 35.0% |
| TTTGAAGATGGTTTGATGGA+AGG | - | chr5_2:15207061-15207080 | Msa0759470:CDS | 35.0% | |
| ATCAACCTTAGAAACCGTTT+CGG | + | chr5_2:15205794-15205813 | None:intergenic | 35.0% | |
| ! | ATTTCTCTTCTCGTCCTTTT+AGG | - | chr5_2:15205812-15205831 | Msa0759470:intron | 35.0% |
| ! | TTTCTCTTCTCGTCCTTTTA+GGG | - | chr5_2:15205813-15205832 | Msa0759470:intron | 35.0% |
| GATCTTTCGTAACAAACCTT+TGG | - | chr5_2:15205990-15206009 | Msa0759470:intron | 35.0% | |
| AAGTTTACATCATTCACCGT+AGG | - | chr5_2:15206076-15206095 | Msa0759470:intron | 35.0% | |
| AGTTTACATCATTCACCGTA+GGG | - | chr5_2:15206077-15206096 | Msa0759470:intron | 35.0% | |
| ! | GTTTCTGATTTGAAGGTTTC+TGG | - | chr5_2:15206252-15206271 | Msa0759470:intron | 35.0% |
| CAATTAGAGCTTGATTCTGA+TGG | - | chr5_2:15206324-15206343 | Msa0759470:CDS | 35.0% | |
| TATTGATGTTGACATGTCAG+TGG | + | chr5_2:15206542-15206561 | None:intergenic | 35.0% | |
| TCTGATGGAATCCTTATTGT+TGG | - | chr5_2:15206767-15206786 | Msa0759470:CDS | 35.0% | |
| TAAGATAACATCTCCAAGCT+TGG | + | chr5_2:15206843-15206862 | None:intergenic | 35.0% | |
| TTGTATAGACTGTGATAAGC+AGG | - | chr5_2:15206923-15206942 | Msa0759470:CDS | 35.0% | |
| ! | ATCTAAGGTGGAGTGTTTAT+TGG | - | chr5_2:15206968-15206987 | Msa0759470:CDS | 35.0% |
| TTTGAAGATGGTTTGATGGA+AGG | - | chr5_2:15207061-15207080 | Msa0759470:CDS | 35.0% | |
| AAAACCAAGCTCTGCATCAT+CGG | - | chr5_2:15205547-15205566 | Msa0759470:intron | 40.0% | |
| !! | GAAGAGGATTGGTTTGAGTT+CGG | + | chr5_2:15205617-15205636 | None:intergenic | 40.0% |
| GAATCAGCGAAAACCCTAAA+AGG | + | chr5_2:15205829-15205848 | None:intergenic | 40.0% | |
| ACGTACTGTTGAAGCTGATT+CGG | - | chr5_2:15205849-15205868 | Msa0759470:intron | 40.0% | |
| AACAAACCTTTGGCAGTGAT+CGG | - | chr5_2:15206000-15206019 | Msa0759470:intron | 40.0% | |
| TTCGAAGATTATGCAGAGCA+AGG | - | chr5_2:15206113-15206132 | Msa0759470:intron | 40.0% | |
| ! | GGTGATTTGGAATTCAATGG+TGG | - | chr5_2:15206158-15206177 | Msa0759470:intron | 40.0% |
| TTGGAATTCAATGGTGGTTG+AGG | - | chr5_2:15206164-15206183 | Msa0759470:intron | 40.0% | |
| TCTGGGTTGTTCTTTGCAAT+TGG | - | chr5_2:15206270-15206289 | Msa0759470:intron | 40.0% | |
| CTGGGTTGTTCTTTGCAATT+GGG | - | chr5_2:15206271-15206290 | Msa0759470:intron | 40.0% | |
| ! | ACTACGAAGACTAGTGTTGA+AGG | - | chr5_2:15206369-15206388 | Msa0759470:CDS | 40.0% |
| !!! | TTGAAGGTGTTTTTGCTGCT+GGG | - | chr5_2:15206385-15206404 | Msa0759470:CDS | 40.0% |
| ! | ATGCCTTCGATTAGAAGTGT+CGG | - | chr5_2:15206615-15206634 | Msa0759470:CDS | 40.0% |
| TTGTGTGTGAATGTGATTCC+TGG | - | chr5_2:15206674-15206693 | Msa0759470:CDS | 40.0% | |
| TGTGTGTGAATGTGATTCCT+GGG | - | chr5_2:15206675-15206694 | Msa0759470:CDS | 40.0% | |
| ATGAACTCACCTTCATGTCA+TGG | - | chr5_2:15206894-15206913 | Msa0759470:CDS | 40.0% | |
| CAATACAGACCATGACATGA+AGG | + | chr5_2:15206906-15206925 | None:intergenic | 40.0% | |
| AAAACCAAGCTCTGCATCAT+CGG | - | chr5_2:15205547-15205566 | Msa0759470:intron | 40.0% | |
| !! | GAAGAGGATTGGTTTGAGTT+CGG | + | chr5_2:15205617-15205636 | None:intergenic | 40.0% |
| GAATCAGCGAAAACCCTAAA+AGG | + | chr5_2:15205829-15205848 | None:intergenic | 40.0% | |
| ACGTACTGTTGAAGCTGATT+CGG | - | chr5_2:15205849-15205868 | Msa0759470:intron | 40.0% | |
| AACAAACCTTTGGCAGTGAT+CGG | - | chr5_2:15206000-15206019 | Msa0759470:intron | 40.0% | |
| TTCGAAGATTATGCAGAGCA+AGG | - | chr5_2:15206113-15206132 | Msa0759470:intron | 40.0% | |
| ! | GGTGATTTGGAATTCAATGG+TGG | - | chr5_2:15206158-15206177 | Msa0759470:intron | 40.0% |
| TTGGAATTCAATGGTGGTTG+AGG | - | chr5_2:15206164-15206183 | Msa0759470:intron | 40.0% | |
| TCTGGGTTGTTCTTTGCAAT+TGG | - | chr5_2:15206270-15206289 | Msa0759470:intron | 40.0% | |
| CTGGGTTGTTCTTTGCAATT+GGG | - | chr5_2:15206271-15206290 | Msa0759470:intron | 40.0% | |
| ! | ACTACGAAGACTAGTGTTGA+AGG | - | chr5_2:15206369-15206388 | Msa0759470:CDS | 40.0% |
| !!! | TTGAAGGTGTTTTTGCTGCT+GGG | - | chr5_2:15206385-15206404 | Msa0759470:CDS | 40.0% |
| ! | ATGCCTTCGATTAGAAGTGT+CGG | - | chr5_2:15206615-15206634 | Msa0759470:CDS | 40.0% |
| TTGTGTGTGAATGTGATTCC+TGG | - | chr5_2:15206674-15206693 | Msa0759470:CDS | 40.0% | |
| TGTGTGTGAATGTGATTCCT+GGG | - | chr5_2:15206675-15206694 | Msa0759470:CDS | 40.0% | |
| ATGAACTCACCTTCATGTCA+TGG | - | chr5_2:15206894-15206913 | Msa0759470:CDS | 40.0% | |
| CAATACAGACCATGACATGA+AGG | + | chr5_2:15206906-15206925 | None:intergenic | 40.0% | |
| !!! | GATGCAGAGCTTGGTTTTGA+CGG | + | chr5_2:15205545-15205564 | None:intergenic | 45.0% |
| CTCAAACCAATCCTCTTCGA+AGG | - | chr5_2:15205619-15205638 | Msa0759470:intron | 45.0% | |
| AACCAATCCTCTTCGAAGGA+TGG | - | chr5_2:15205623-15205642 | Msa0759470:intron | 45.0% | |
| ATCCATCCTTCGAAGAGGAT+TGG | + | chr5_2:15205628-15205647 | None:intergenic | 45.0% | |
| AATCCTCTTCGAAGGATGGA+TGG | - | chr5_2:15205627-15205646 | Msa0759470:intron | 45.0% | |
| !! | CGAATTTAGCGGACTGTTGA+CGG | + | chr5_2:15205756-15205775 | None:intergenic | 45.0% |
| CGTCAACAGTCCGCTAAATT+CGG | - | chr5_2:15205754-15205773 | Msa0759470:intron | 45.0% | |
| GATCTCGGTTCCGAATTTAG+CGG | + | chr5_2:15205767-15205786 | None:intergenic | 45.0% | |
| AACCGAGATCTTCACCGAAA+CGG | - | chr5_2:15205777-15205796 | Msa0759470:intron | 45.0% | |
| AACCGTTTCGGTGAAGATCT+CGG | + | chr5_2:15205782-15205801 | None:intergenic | 45.0% | |
| CTTCACCGAAACGGTTTCTA+AGG | - | chr5_2:15205786-15205805 | Msa0759470:intron | 45.0% | |
| GTAACCATTAGGACCATCAC+CGG | + | chr5_2:15205923-15205942 | None:intergenic | 45.0% | |
| GTGATGGTCCTAATGGTTAC+TGG | - | chr5_2:15205923-15205942 | Msa0759470:intron | 45.0% | |
| CTAATGGTTACTGGAACCGT+GGG | - | chr5_2:15205932-15205951 | Msa0759470:intron | 45.0% | |
| TCAGCTTGTGCTGTATGTGA+CGG | - | chr5_2:15205958-15205977 | Msa0759470:intron | 45.0% | |
| TTCACCGTAGGGATACGTTT+CGG | - | chr5_2:15206088-15206107 | Msa0759470:intron | 45.0% | |
| ! | TCAATGGTGGTTGAGGCTTT+TGG | - | chr5_2:15206171-15206190 | Msa0759470:intron | 45.0% |
| !! | TGGTTGAGGCTTTTGGAGAT+GGG | - | chr5_2:15206178-15206197 | Msa0759470:intron | 45.0% |
| ATGGGGAGAATCAGAAGCTT+GGG | - | chr5_2:15206196-15206215 | Msa0759470:intron | 45.0% | |
| GGAGAATGTGGTGACAAAAG+AGG | - | chr5_2:15206230-15206249 | Msa0759470:intron | 45.0% | |
| CTTTGCAATTGGGCATGAAC+CGG | - | chr5_2:15206281-15206300 | Msa0759470:CDS | 45.0% | |
| ! | TGAACCGGCGACAAAGTTTT+TGG | - | chr5_2:15206296-15206315 | Msa0759470:CDS | 45.0% |
| CCATCCAAAAACTTTGTCGC+CGG | + | chr5_2:15206303-15206322 | None:intergenic | 45.0% | |
| !!! | GTTGAAGGTGTTTTTGCTGC+TGG | - | chr5_2:15206384-15206403 | Msa0759470:CDS | 45.0% |
| !!! | TGAAGGTGTTTTTGCTGCTG+GGG | - | chr5_2:15206386-15206405 | Msa0759470:CDS | 45.0% |
| AGACAAGCTATTACTGCTGC+TGG | - | chr5_2:15206429-15206448 | Msa0759470:CDS | 45.0% | |
| TGATGTTGACATGTCAGTGG+CGG | + | chr5_2:15206539-15206558 | None:intergenic | 45.0% | |
| ! | CTTCTAATCGAAGGCATGTC+CGG | + | chr5_2:15206612-15206631 | None:intergenic | 45.0% |
| !! | TGCCTTCGATTAGAAGTGTC+GGG | - | chr5_2:15206616-15206635 | Msa0759470:CDS | 45.0% |
| !!! | GATGCAGAGCTTGGTTTTGA+CGG | + | chr5_2:15205545-15205564 | None:intergenic | 45.0% |
| CTCAAACCAATCCTCTTCGA+AGG | - | chr5_2:15205619-15205638 | Msa0759470:intron | 45.0% | |
| AACCAATCCTCTTCGAAGGA+TGG | - | chr5_2:15205623-15205642 | Msa0759470:intron | 45.0% | |
| ATCCATCCTTCGAAGAGGAT+TGG | + | chr5_2:15205628-15205647 | None:intergenic | 45.0% | |
| AATCCTCTTCGAAGGATGGA+TGG | - | chr5_2:15205627-15205646 | Msa0759470:intron | 45.0% | |
| !! | CGAATTTAGCGGACTGTTGA+CGG | + | chr5_2:15205756-15205775 | None:intergenic | 45.0% |
| CGTCAACAGTCCGCTAAATT+CGG | - | chr5_2:15205754-15205773 | Msa0759470:intron | 45.0% | |
| GATCTCGGTTCCGAATTTAG+CGG | + | chr5_2:15205767-15205786 | None:intergenic | 45.0% | |
| AACCGAGATCTTCACCGAAA+CGG | - | chr5_2:15205777-15205796 | Msa0759470:intron | 45.0% | |
| AACCGTTTCGGTGAAGATCT+CGG | + | chr5_2:15205782-15205801 | None:intergenic | 45.0% | |
| CTTCACCGAAACGGTTTCTA+AGG | - | chr5_2:15205786-15205805 | Msa0759470:intron | 45.0% | |
| GTAACCATTAGGACCATCAC+CGG | + | chr5_2:15205923-15205942 | None:intergenic | 45.0% | |
| GTGATGGTCCTAATGGTTAC+TGG | - | chr5_2:15205923-15205942 | Msa0759470:intron | 45.0% | |
| CTAATGGTTACTGGAACCGT+GGG | - | chr5_2:15205932-15205951 | Msa0759470:intron | 45.0% | |
| TCAGCTTGTGCTGTATGTGA+CGG | - | chr5_2:15205958-15205977 | Msa0759470:intron | 45.0% | |
| TTCACCGTAGGGATACGTTT+CGG | - | chr5_2:15206088-15206107 | Msa0759470:intron | 45.0% | |
| ! | TCAATGGTGGTTGAGGCTTT+TGG | - | chr5_2:15206171-15206190 | Msa0759470:intron | 45.0% |
| !! | TGGTTGAGGCTTTTGGAGAT+GGG | - | chr5_2:15206178-15206197 | Msa0759470:intron | 45.0% |
| ATGGGGAGAATCAGAAGCTT+GGG | - | chr5_2:15206196-15206215 | Msa0759470:intron | 45.0% | |
| GGAGAATGTGGTGACAAAAG+AGG | - | chr5_2:15206230-15206249 | Msa0759470:intron | 45.0% | |
| CTTTGCAATTGGGCATGAAC+CGG | - | chr5_2:15206281-15206300 | Msa0759470:CDS | 45.0% | |
| ! | TGAACCGGCGACAAAGTTTT+TGG | - | chr5_2:15206296-15206315 | Msa0759470:CDS | 45.0% |
| CCATCCAAAAACTTTGTCGC+CGG | + | chr5_2:15206303-15206322 | None:intergenic | 45.0% | |
| !!! | GTTGAAGGTGTTTTTGCTGC+TGG | - | chr5_2:15206384-15206403 | Msa0759470:CDS | 45.0% |
| !!! | TGAAGGTGTTTTTGCTGCTG+GGG | - | chr5_2:15206386-15206405 | Msa0759470:CDS | 45.0% |
| AGACAAGCTATTACTGCTGC+TGG | - | chr5_2:15206429-15206448 | Msa0759470:CDS | 45.0% | |
| TGATGTTGACATGTCAGTGG+CGG | + | chr5_2:15206539-15206558 | None:intergenic | 45.0% | |
| ! | CTTCTAATCGAAGGCATGTC+CGG | + | chr5_2:15206612-15206631 | None:intergenic | 45.0% |
| !! | TGCCTTCGATTAGAAGTGTC+GGG | - | chr5_2:15206616-15206635 | Msa0759470:CDS | 45.0% |
| !!! | AGAGCTTGGTTTTGACGGTG+GGG | + | chr5_2:15205540-15205559 | None:intergenic | 50.0% |
| !!! | CAGAGCTTGGTTTTGACGGT+GGG | + | chr5_2:15205541-15205560 | None:intergenic | 50.0% |
| AAGCTCTGCATCATCGGAAG+CGG | - | chr5_2:15205553-15205572 | Msa0759470:intron | 50.0% | |
| !! | GATTGGTTTGAGTTCGGCAC+GGG | + | chr5_2:15205611-15205630 | None:intergenic | 50.0% |
| !! | GGATTGGTTTGAGTTCGGCA+CGG | + | chr5_2:15205612-15205631 | None:intergenic | 50.0% |
| ! | GAAATTCTCGACGTCGGTTG+TGG | + | chr5_2:15205686-15205705 | None:intergenic | 50.0% |
| ! | GATTCGGTTATCGTCGCTAC+CGG | - | chr5_2:15205865-15205884 | Msa0759470:intron | 50.0% |
| TAACCGTTTCGCAACAGCTC+CGG | + | chr5_2:15205887-15205906 | None:intergenic | 50.0% | |
| CCACGGTTCCAGTAACCATT+AGG | + | chr5_2:15205934-15205953 | None:intergenic | 50.0% | |
| CCTAATGGTTACTGGAACCG+TGG | - | chr5_2:15205931-15205950 | Msa0759470:intron | 50.0% | |
| CAGCACAAGCTGAAATCCCA+CGG | + | chr5_2:15205951-15205970 | None:intergenic | 50.0% | |
| AAACCTTTGGCAGTGATCGG+TGG | - | chr5_2:15206003-15206022 | Msa0759470:intron | 50.0% | |
| TGGTGGAGATTCAGCTATGG+AGG | - | chr5_2:15206023-15206042 | Msa0759470:intron | 50.0% | |
| TCACCGTAGGGATACGTTTC+GGG | - | chr5_2:15206089-15206108 | Msa0759470:intron | 50.0% | |
| AAGCCCGAAACGTATCCCTA+CGG | + | chr5_2:15206095-15206114 | None:intergenic | 50.0% | |
| !! | GTGGTTGAGGCTTTTGGAGA+TGG | - | chr5_2:15206177-15206196 | Msa0759470:intron | 50.0% |
| !! | GGTTGAGGCTTTTGGAGATG+GGG | - | chr5_2:15206179-15206198 | Msa0759470:intron | 50.0% |
| GATGGGGAGAATCAGAAGCT+TGG | - | chr5_2:15206195-15206214 | Msa0759470:intron | 50.0% | |
| TGGGGAGAATCAGAAGCTTG+GGG | - | chr5_2:15206197-15206216 | Msa0759470:intron | 50.0% | |
| TCAGAAGCTTGGGGGTTTGA+AGG | - | chr5_2:15206206-15206225 | Msa0759470:intron | 50.0% | |
| GGGTTTGAAGGTGGAGAATG+TGG | - | chr5_2:15206218-15206237 | Msa0759470:intron | 50.0% | |
| !! | CCGGCGACAAAGTTTTTGGA+TGG | - | chr5_2:15206300-15206319 | Msa0759470:CDS | 50.0% |
| TGGGTATGTTGTGACGAAGC+CGG | - | chr5_2:15206344-15206363 | Msa0759470:CDS | 50.0% | |
| !! | ACACTAGTCTTCGTAGTCCC+CGG | + | chr5_2:15206366-15206385 | None:intergenic | 50.0% |
| ! | TTTTGCTGCTGGGGATGTTC+AGG | - | chr5_2:15206395-15206414 | Msa0759470:CDS | 50.0% |
| GCTATTACTGCTGCTGGATC+TGG | - | chr5_2:15206435-15206454 | Msa0759470:CDS | 50.0% | |
| !! | GCCTTCGATTAGAAGTGTCG+GGG | - | chr5_2:15206617-15206636 | Msa0759470:CDS | 50.0% |
| !!! | AGAGCTTGGTTTTGACGGTG+GGG | + | chr5_2:15205540-15205559 | None:intergenic | 50.0% |
| !!! | CAGAGCTTGGTTTTGACGGT+GGG | + | chr5_2:15205541-15205560 | None:intergenic | 50.0% |
| AAGCTCTGCATCATCGGAAG+CGG | - | chr5_2:15205553-15205572 | Msa0759470:intron | 50.0% | |
| !! | GATTGGTTTGAGTTCGGCAC+GGG | + | chr5_2:15205611-15205630 | None:intergenic | 50.0% |
| !! | GGATTGGTTTGAGTTCGGCA+CGG | + | chr5_2:15205612-15205631 | None:intergenic | 50.0% |
| ! | GAAATTCTCGACGTCGGTTG+TGG | + | chr5_2:15205686-15205705 | None:intergenic | 50.0% |
| ! | GATTCGGTTATCGTCGCTAC+CGG | - | chr5_2:15205865-15205884 | Msa0759470:intron | 50.0% |
| TAACCGTTTCGCAACAGCTC+CGG | + | chr5_2:15205887-15205906 | None:intergenic | 50.0% | |
| CCACGGTTCCAGTAACCATT+AGG | + | chr5_2:15205934-15205953 | None:intergenic | 50.0% | |
| CCTAATGGTTACTGGAACCG+TGG | - | chr5_2:15205931-15205950 | Msa0759470:intron | 50.0% | |
| CAGCACAAGCTGAAATCCCA+CGG | + | chr5_2:15205951-15205970 | None:intergenic | 50.0% | |
| AAACCTTTGGCAGTGATCGG+TGG | - | chr5_2:15206003-15206022 | Msa0759470:intron | 50.0% | |
| TGGTGGAGATTCAGCTATGG+AGG | - | chr5_2:15206023-15206042 | Msa0759470:intron | 50.0% | |
| TCACCGTAGGGATACGTTTC+GGG | - | chr5_2:15206089-15206108 | Msa0759470:intron | 50.0% | |
| AAGCCCGAAACGTATCCCTA+CGG | + | chr5_2:15206095-15206114 | None:intergenic | 50.0% | |
| !! | GTGGTTGAGGCTTTTGGAGA+TGG | - | chr5_2:15206177-15206196 | Msa0759470:intron | 50.0% |
| !! | GGTTGAGGCTTTTGGAGATG+GGG | - | chr5_2:15206179-15206198 | Msa0759470:intron | 50.0% |
| GATGGGGAGAATCAGAAGCT+TGG | - | chr5_2:15206195-15206214 | Msa0759470:intron | 50.0% | |
| TGGGGAGAATCAGAAGCTTG+GGG | - | chr5_2:15206197-15206216 | Msa0759470:intron | 50.0% | |
| TCAGAAGCTTGGGGGTTTGA+AGG | - | chr5_2:15206206-15206225 | Msa0759470:intron | 50.0% | |
| GGGTTTGAAGGTGGAGAATG+TGG | - | chr5_2:15206218-15206237 | Msa0759470:intron | 50.0% | |
| !! | CCGGCGACAAAGTTTTTGGA+TGG | - | chr5_2:15206300-15206319 | Msa0759470:CDS | 50.0% |
| TGGGTATGTTGTGACGAAGC+CGG | - | chr5_2:15206344-15206363 | Msa0759470:CDS | 50.0% | |
| !! | ACACTAGTCTTCGTAGTCCC+CGG | + | chr5_2:15206366-15206385 | None:intergenic | 50.0% |
| ! | TTTTGCTGCTGGGGATGTTC+AGG | - | chr5_2:15206395-15206414 | Msa0759470:CDS | 50.0% |
| GCTATTACTGCTGCTGGATC+TGG | - | chr5_2:15206435-15206454 | Msa0759470:CDS | 50.0% | |
| !! | GCCTTCGATTAGAAGTGTCG+GGG | - | chr5_2:15206617-15206636 | Msa0759470:CDS | 50.0% |
| !!! | CTTGGTTTTGACGGTGGGGA+GGG | + | chr5_2:15205536-15205555 | None:intergenic | 55.0% |
| !!! | GCAGAGCTTGGTTTTGACGG+TGG | + | chr5_2:15205542-15205561 | None:intergenic | 55.0% |
| GCTTCCGATGATGCAGAGCT+TGG | + | chr5_2:15205554-15205573 | None:intergenic | 55.0% | |
| TGGCCATCCATCCTTCGAAG+AGG | + | chr5_2:15205633-15205652 | None:intergenic | 55.0% | |
| ! | ATTCTCGACGTCGGTTGTGG+TGG | + | chr5_2:15205683-15205702 | None:intergenic | 55.0% |
| ACCGACGTCGAGAATTTCCC+CGG | - | chr5_2:15205688-15205707 | Msa0759470:intron | 55.0% | |
| ACCGGGGAAATTCTCGACGT+CGG | + | chr5_2:15205692-15205711 | None:intergenic | 55.0% | |
| AATTTCCCCGGTTTCCCCGA+CGG | - | chr5_2:15205700-15205719 | Msa0759470:intron | 55.0% | |
| CTACCGGAGCTGTTGCGAAA+CGG | - | chr5_2:15205881-15205900 | Msa0759470:intron | 55.0% | |
| GCGAAACGGTTACCGTTCAC+CGG | - | chr5_2:15205895-15205914 | Msa0759470:intron | 55.0% | |
| ATTAGGACCATCACCGGAGC+CGG | + | chr5_2:15205917-15205936 | None:intergenic | 55.0% | |
| !! | CGGTGGTGGAGATTCAGCTA+TGG | - | chr5_2:15206020-15206039 | Msa0759470:intron | 55.0% |
| GGGGAGAATCAGAAGCTTGG+GGG | - | chr5_2:15206198-15206217 | Msa0759470:intron | 55.0% | |
| GAAGCTTGGGGGTTTGAAGG+TGG | - | chr5_2:15206209-15206228 | Msa0759470:intron | 55.0% | |
| GGGTATGTTGTGACGAAGCC+GGG | - | chr5_2:15206345-15206364 | Msa0759470:CDS | 55.0% | |
| GGTATGTTGTGACGAAGCCG+GGG | - | chr5_2:15206346-15206365 | Msa0759470:CDS | 55.0% | |
| GCCCCGACACTTCTAATCGA+AGG | + | chr5_2:15206621-15206640 | None:intergenic | 55.0% | |
| !!! | CTTGGTTTTGACGGTGGGGA+GGG | + | chr5_2:15205536-15205555 | None:intergenic | 55.0% |
| !!! | GCAGAGCTTGGTTTTGACGG+TGG | + | chr5_2:15205542-15205561 | None:intergenic | 55.0% |
| GCTTCCGATGATGCAGAGCT+TGG | + | chr5_2:15205554-15205573 | None:intergenic | 55.0% | |
| TGGCCATCCATCCTTCGAAG+AGG | + | chr5_2:15205633-15205652 | None:intergenic | 55.0% | |
| ! | ATTCTCGACGTCGGTTGTGG+TGG | + | chr5_2:15205683-15205702 | None:intergenic | 55.0% |
| ACCGACGTCGAGAATTTCCC+CGG | - | chr5_2:15205688-15205707 | Msa0759470:intron | 55.0% | |
| ACCGGGGAAATTCTCGACGT+CGG | + | chr5_2:15205692-15205711 | None:intergenic | 55.0% | |
| AATTTCCCCGGTTTCCCCGA+CGG | - | chr5_2:15205700-15205719 | Msa0759470:intron | 55.0% | |
| CTACCGGAGCTGTTGCGAAA+CGG | - | chr5_2:15205881-15205900 | Msa0759470:intron | 55.0% | |
| GCGAAACGGTTACCGTTCAC+CGG | - | chr5_2:15205895-15205914 | Msa0759470:intron | 55.0% | |
| ATTAGGACCATCACCGGAGC+CGG | + | chr5_2:15205917-15205936 | None:intergenic | 55.0% | |
| !! | CGGTGGTGGAGATTCAGCTA+TGG | - | chr5_2:15206020-15206039 | Msa0759470:intron | 55.0% |
| GGGGAGAATCAGAAGCTTGG+GGG | - | chr5_2:15206198-15206217 | Msa0759470:intron | 55.0% | |
| GAAGCTTGGGGGTTTGAAGG+TGG | - | chr5_2:15206209-15206228 | Msa0759470:intron | 55.0% | |
| GGGTATGTTGTGACGAAGCC+GGG | - | chr5_2:15206345-15206364 | Msa0759470:CDS | 55.0% | |
| GGTATGTTGTGACGAAGCCG+GGG | - | chr5_2:15206346-15206365 | Msa0759470:CDS | 55.0% | |
| GCCCCGACACTTCTAATCGA+AGG | + | chr5_2:15206621-15206640 | None:intergenic | 55.0% | |
| !!! | GCTTGGTTTTGACGGTGGGG+AGG | + | chr5_2:15205537-15205556 | None:intergenic | 60.0% |
| ! | TGGTTTGAGTTCGGCACGGG+CGG | + | chr5_2:15205608-15205627 | None:intergenic | 60.0% |
| ATGGCCAACGACATCGCTCC+AGG | - | chr5_2:15205646-15205665 | Msa0759470:intron | 60.0% | |
| ! | CGTCGGTTGTGGTGGTGAGT+TGG | + | chr5_2:15205675-15205694 | None:intergenic | 60.0% |
| AGGATTCCGTCGGGGAAACC+GGG | + | chr5_2:15205709-15205728 | None:intergenic | 60.0% | |
| GAGGATTCCGTCGGGGAAAC+CGG | + | chr5_2:15205710-15205729 | None:intergenic | 60.0% | |
| GGTTTCCCCGACGGAATCCT+CGG | - | chr5_2:15205709-15205728 | Msa0759470:intron | 60.0% | |
| AATCCTCGGCGGCGAACTCA+TGG | - | chr5_2:15205723-15205742 | Msa0759470:intron | 60.0% | |
| ! | GGCTCCGGTGATGGTCCTAA+TGG | - | chr5_2:15205916-15205935 | Msa0759470:intron | 60.0% |
| CCACCACCGATCACTGCCAA+AGG | + | chr5_2:15206009-15206028 | None:intergenic | 60.0% | |
| CCTTTGGCAGTGATCGGTGG+TGG | - | chr5_2:15206006-15206025 | Msa0759470:intron | 60.0% | |
| !!! | GCTTGGTTTTGACGGTGGGG+AGG | + | chr5_2:15205537-15205556 | None:intergenic | 60.0% |
| ! | TGGTTTGAGTTCGGCACGGG+CGG | + | chr5_2:15205608-15205627 | None:intergenic | 60.0% |
| ATGGCCAACGACATCGCTCC+AGG | - | chr5_2:15205646-15205665 | Msa0759470:intron | 60.0% | |
| ! | CGTCGGTTGTGGTGGTGAGT+TGG | + | chr5_2:15205675-15205694 | None:intergenic | 60.0% |
| AGGATTCCGTCGGGGAAACC+GGG | + | chr5_2:15205709-15205728 | None:intergenic | 60.0% | |
| GAGGATTCCGTCGGGGAAAC+CGG | + | chr5_2:15205710-15205729 | None:intergenic | 60.0% | |
| GGTTTCCCCGACGGAATCCT+CGG | - | chr5_2:15205709-15205728 | Msa0759470:intron | 60.0% | |
| AATCCTCGGCGGCGAACTCA+TGG | - | chr5_2:15205723-15205742 | Msa0759470:intron | 60.0% | |
| ! | GGCTCCGGTGATGGTCCTAA+TGG | - | chr5_2:15205916-15205935 | Msa0759470:intron | 60.0% |
| CCACCACCGATCACTGCCAA+AGG | + | chr5_2:15206009-15206028 | None:intergenic | 60.0% | |
| CCTTTGGCAGTGATCGGTGG+TGG | - | chr5_2:15206006-15206025 | Msa0759470:intron | 60.0% | |
| TTTGACGGTGGGGAGGGTGG+TGG | + | chr5_2:15205530-15205549 | None:intergenic | 65.0% | |
| !! | GGTTTTGACGGTGGGGAGGG+TGG | + | chr5_2:15205533-15205552 | None:intergenic | 65.0% |
| TTCGGCACGGGCGGCGTATA+CGG | + | chr5_2:15205599-15205618 | None:intergenic | 65.0% | |
| GCCAACGACATCGCTCCAGG+AGG | - | chr5_2:15205649-15205668 | Msa0759470:intron | 65.0% | |
| GCCTCCTGGAGCGATGTCGT+TGG | + | chr5_2:15205653-15205672 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGAGTTGGCCTCC+TGG | + | chr5_2:15205667-15205686 | None:intergenic | 65.0% |
| GGATTCCGTCGGGGAAACCG+GGG | + | chr5_2:15205708-15205727 | None:intergenic | 65.0% | |
| TTCCCCGACGGAATCCTCGG+CGG | - | chr5_2:15205712-15205731 | Msa0759470:intron | 65.0% | |
| TTCGCCGCCGAGGATTCCGT+CGG | + | chr5_2:15205719-15205738 | None:intergenic | 65.0% | |
| GTTCCATGAGTTCGCCGCCG+AGG | + | chr5_2:15205729-15205748 | None:intergenic | 65.0% | |
| !! | CGGTTACCGTTCACCGGCTC+CGG | - | chr5_2:15205901-15205920 | Msa0759470:intron | 65.0% |
| CCATCACCGGAGCCGGTGAA+CGG | + | chr5_2:15205910-15205929 | None:intergenic | 65.0% | |
| TTTGACGGTGGGGAGGGTGG+TGG | + | chr5_2:15205530-15205549 | None:intergenic | 65.0% | |
| !! | GGTTTTGACGGTGGGGAGGG+TGG | + | chr5_2:15205533-15205552 | None:intergenic | 65.0% |
| TTCGGCACGGGCGGCGTATA+CGG | + | chr5_2:15205599-15205618 | None:intergenic | 65.0% | |
| GCCAACGACATCGCTCCAGG+AGG | - | chr5_2:15205649-15205668 | Msa0759470:intron | 65.0% | |
| GCCTCCTGGAGCGATGTCGT+TGG | + | chr5_2:15205653-15205672 | None:intergenic | 65.0% | |
| ! | GTGGTGGTGAGTTGGCCTCC+TGG | + | chr5_2:15205667-15205686 | None:intergenic | 65.0% |
| GGATTCCGTCGGGGAAACCG+GGG | + | chr5_2:15205708-15205727 | None:intergenic | 65.0% | |
| TTCCCCGACGGAATCCTCGG+CGG | - | chr5_2:15205712-15205731 | Msa0759470:intron | 65.0% | |
| TTCGCCGCCGAGGATTCCGT+CGG | + | chr5_2:15205719-15205738 | None:intergenic | 65.0% | |
| GTTCCATGAGTTCGCCGCCG+AGG | + | chr5_2:15205729-15205748 | None:intergenic | 65.0% | |
| !! | CGGTTACCGTTCACCGGCTC+CGG | - | chr5_2:15205901-15205920 | Msa0759470:intron | 65.0% |
| CCATCACCGGAGCCGGTGAA+CGG | + | chr5_2:15205910-15205929 | None:intergenic | 65.0% | |
| GTATACGGCGGCGGTGTGGG+CGG | + | chr5_2:15205584-15205603 | None:intergenic | 70.0% | |
| GGCGTATACGGCGGCGGTGT+GGG | + | chr5_2:15205587-15205606 | None:intergenic | 70.0% | |
| TCGCCGCCGAGGATTCCGTC+GGG | + | chr5_2:15205718-15205737 | None:intergenic | 70.0% | |
| !! | CCGTTCACCGGCTCCGGTGA+TGG | - | chr5_2:15205907-15205926 | Msa0759470:intron | 70.0% |
| GTATACGGCGGCGGTGTGGG+CGG | + | chr5_2:15205584-15205603 | None:intergenic | 70.0% | |
| GGCGTATACGGCGGCGGTGT+GGG | + | chr5_2:15205587-15205606 | None:intergenic | 70.0% | |
| TCGCCGCCGAGGATTCCGTC+GGG | + | chr5_2:15205718-15205737 | None:intergenic | 70.0% | |
| !! | CCGTTCACCGGCTCCGGTGA+TGG | - | chr5_2:15205907-15205926 | Msa0759470:intron | 70.0% |
| CGGCGTATACGGCGGCGGTG+TGG | + | chr5_2:15205588-15205607 | None:intergenic | 75.0% | |
| ACGGGCGGCGTATACGGCGG+CGG | + | chr5_2:15205593-15205612 | None:intergenic | 75.0% | |
| GGCACGGGCGGCGTATACGG+CGG | + | chr5_2:15205596-15205615 | None:intergenic | 75.0% | |
| CGCCGCCGAGGATTCCGTCG+GGG | + | chr5_2:15205717-15205736 | None:intergenic | 75.0% | |
| CGGCGTATACGGCGGCGGTG+TGG | + | chr5_2:15205588-15205607 | None:intergenic | 75.0% | |
| ACGGGCGGCGTATACGGCGG+CGG | + | chr5_2:15205593-15205612 | None:intergenic | 75.0% | |
| GGCACGGGCGGCGTATACGG+CGG | + | chr5_2:15205596-15205615 | None:intergenic | 75.0% | |
| CGCCGCCGAGGATTCCGTCG+GGG | + | chr5_2:15205717-15205736 | None:intergenic | 75.0% | |
| ! | TACGGCGGCGGTGTGGGCGG+CGG | + | chr5_2:15205581-15205600 | None:intergenic | 80.0% |
| ! | TACGGCGGCGGTGTGGGCGG+CGG | + | chr5_2:15205581-15205600 | None:intergenic | 80.0% |
| ! | ACGGCGGCGGTGTGGGCGGC+GGG | + | chr5_2:15205580-15205599 | None:intergenic | 85.0% |
| ! | ACGGCGGCGGTGTGGGCGGC+GGG | + | chr5_2:15205580-15205599 | None:intergenic | 85.0% |
| ! | CGGCGGCGGTGTGGGCGGCG+GGG | + | chr5_2:15205579-15205598 | None:intergenic | 90.0% |
| ! | CGGCGGCGGTGTGGGCGGCG+GGG | + | chr5_2:15205579-15205598 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 15205517 | 15207107 | 15205517 | ID=Msa0759470;Name=Msa0759470 |
| chr5_2 | mRNA | 15205517 | 15207107 | 15205517 | ID=Msa0759470-mRNA-1;Parent=Msa0759470;Name=Msa0759470-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|0.75|1|1|4|0|250 |
| chr5_2 | exon | 15206863 | 15207107 | 15206863 | ID=Msa0759470-mRNA-1:exon:6918;Parent=Msa0759470-mRNA-1 |
| chr5_2 | exon | 15206572 | 15206790 | 15206572 | ID=Msa0759470-mRNA-1:exon:6917;Parent=Msa0759470-mRNA-1 |
| chr5_2 | exon | 15206278 | 15206526 | 15206278 | ID=Msa0759470-mRNA-1:exon:6916;Parent=Msa0759470-mRNA-1 |
| chr5_2 | exon | 15205517 | 15205556 | 15205517 | ID=Msa0759470-mRNA-1:exon:6915;Parent=Msa0759470-mRNA-1 |
| chr5_2 | CDS | 15206863 | 15207107 | 15206863 | ID=Msa0759470-mRNA-1:cds;Parent=Msa0759470-mRNA-1 |
| chr5_2 | CDS | 15206572 | 15206790 | 15206572 | ID=Msa0759470-mRNA-1:cds;Parent=Msa0759470-mRNA-1 |
| chr5_2 | CDS | 15206278 | 15206526 | 15206278 | ID=Msa0759470-mRNA-1:cds;Parent=Msa0759470-mRNA-1 |
| chr5_2 | CDS | 15205517 | 15205556 | 15205517 | ID=Msa0759470-mRNA-1:cds;Parent=Msa0759470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
