AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1322900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322900 MtrunA17_Chr8g0355661 95.395 152 7 0 1 152 1 152 1.06e-106 301
Msa1322900 MtrunA17_Chr8g0355741 81.169 154 28 1 1 153 1 154 1.06e-88 255
Msa1322900 MtrunA17_Chr8g0355721 78.289 152 32 1 1 151 1 152 4.75e-88 253
Msa1322900 MtrunA17_Chr8g0355811 75.325 154 36 2 1 153 1 153 4.45e-83 241
Msa1322900 MtrunA17_Chr8g0355781 73.026 152 40 1 1 151 1 152 1.04e-80 235
Msa1322900 MtrunA17_Chr8g0355821 71.429 154 42 2 1 153 1 153 5.17e-79 231
Msa1322900 MtrunA17_Chr8g0355761 71.711 152 42 1 1 151 1 152 7.02e-79 230
Msa1322900 MtrunA17_Chr8g0355641 70.779 154 44 1 1 153 1 154 8.11e-79 230
Msa1322900 MtrunA17_Chr8g0355791 74.342 152 37 2 1 151 1 151 5.96e-78 228
Msa1322900 MtrunA17_Chr8g0355801 73.026 152 39 2 1 151 1 151 1.84e-77 227
Msa1322900 MtrunA17_Chr8g0355771 73.026 152 39 2 1 151 1 151 1.12e-76 225
Msa1322900 MtrunA17_Chr1g0160371 41.176 153 86 3 1 150 1 152 6.12e-38 126
Msa1322900 MtrunA17_Chr1g0160381 38.562 153 90 3 1 150 5 156 5.21e-37 124
Msa1322900 MtrunA17_Chr1g0160391 40.127 157 83 6 1 148 1 155 5.84e-30 107
Msa1322900 MtrunA17_Chr1g0160801 38.776 147 82 4 7 151 7 147 3.38e-28 101
Msa1322900 MtrunA17_Chr8g0339261 35.862 145 89 4 6 148 8 150 2.43e-26 97.4
Msa1322900 MtrunA17_Chr1g0160351 40.860 93 52 2 61 150 1 93 4.46e-20 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322900 AT5G28010.1 36.667 150 91 4 3 149 15 163 1.22e-26 98.6
Msa1322900 AT5G28010.2 36.667 150 91 4 3 149 15 163 1.22e-26 98.6
Msa1322900 AT1G70840.1 38.000 150 89 4 3 149 20 168 3.32e-26 97.8
Msa1322900 AT1G70830.5 38.667 150 88 4 3 149 22 170 6.32e-26 97.1
Msa1322900 AT1G70830.3 38.667 150 88 4 3 149 22 170 1.23e-25 97.1
Msa1322900 AT1G70890.1 37.333 150 90 4 3 149 7 155 2.69e-25 95.1
Msa1322900 AT1G70830.2 38.667 150 88 4 3 149 22 170 4.86e-25 96.7
Msa1322900 AT1G70830.1 38.667 150 88 4 3 149 22 170 1.51e-24 97.1
Msa1322900 AT1G70830.1 38.000 150 89 4 3 149 184 332 1.08e-23 94.7
Msa1322900 AT1G70830.4 38.000 150 89 4 3 149 137 285 2.75e-24 95.5
Msa1322900 AT1G70830.4 35.484 93 58 2 59 149 31 123 8.17e-12 62.0
Msa1322900 AT5G28000.1 35.333 150 93 4 3 149 13 161 1.82e-23 90.5
Msa1322900 AT1G70850.2 36.667 150 91 4 3 149 9 157 1.42e-22 90.1
Msa1322900 AT1G23120.1 28.859 149 102 2 1 149 1 145 1.82e-22 87.4
Msa1322900 AT1G23120.2 29.371 143 97 2 7 149 57 195 4.24e-22 87.8
Msa1322900 AT1G70850.3 36.667 150 91 4 3 149 9 157 4.62e-22 90.1
Msa1322900 AT1G70850.3 36.429 140 85 4 13 149 175 313 2.46e-20 85.5
Msa1322900 AT1G70850.1 36.667 150 91 4 3 149 9 157 4.62e-22 90.1
Msa1322900 AT1G70850.1 36.429 140 85 4 13 149 175 313 2.46e-20 85.5
Msa1322900 AT1G70870.1 38.542 96 59 0 55 150 43 138 2.65e-21 84.3
Msa1322900 AT1G23130.1 31.544 149 99 3 3 149 10 157 3.48e-21 84.7
Msa1322900 AT4G23670.1 32.895 152 100 2 1 151 1 151 5.32e-21 84.0
Msa1322900 AT1G14930.1 30.263 152 104 2 1 151 1 151 4.27e-20 81.6
Msa1322900 AT2G01520.1 30.263 152 104 2 1 151 1 151 6.01e-20 81.3
Msa1322900 AT4G14060.1 29.605 152 105 2 1 151 1 151 1.17e-18 77.8
Msa1322900 AT1G70880.1 30.667 150 100 4 3 149 8 156 3.38e-18 76.6
Msa1322900 AT2G01530.1 29.605 152 105 2 1 151 1 151 3.44e-18 76.6
Msa1322900 AT4G23680.1 29.139 151 105 2 1 150 1 150 1.71e-17 74.7
Msa1322900 AT1G30990.1 30.000 150 102 3 1 149 1 148 5.19e-17 73.6
Msa1322900 AT1G14940.1 28.289 152 107 2 1 151 1 151 6.37e-17 73.6
Msa1322900 AT1G35260.1 30.137 146 97 4 7 149 6 149 7.15e-17 73.2
Msa1322900 AT1G14950.1 29.139 151 105 2 1 150 1 150 1.18e-16 72.8
Msa1322900 AT3G26450.1 28.105 153 107 3 1 151 1 152 6.55e-15 68.2
Msa1322900 AT1G14960.1 27.922 154 109 2 1 153 1 153 1.43e-14 67.0
Msa1322900 AT3G26460.1 27.451 153 108 3 1 151 1 152 6.58e-14 65.5
Msa1322900 AT1G35310.1 27.338 139 97 4 13 149 12 148 1.58e-13 64.3
Msa1322900 AT1G24020.1 30.263 152 103 3 1 150 1 151 3.74e-12 60.8
Msa1322900 AT1G24020.2 30.263 152 103 3 1 150 1 151 3.74e-12 60.8

Find 41 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAATGCAATTTCTATTTAA+AGG 0.165201 8_4:-30441446 Msa1322900:five_prime_UTR
ATCTTCACCTTCATGAAGTT+TGG 0.299460 8_4:+30441224 None:intergenic
GGTTGATATTATGATGAAAC+TGG 0.396131 8_4:+30441410 None:intergenic
AAGTTCAGTACTAAGTTTAC+CGG 0.399540 8_4:+30441335 None:intergenic
AACATTAGCGAAAGAGTTCA+TGG 0.404572 8_4:-30441249 Msa1322900:CDS
AACAAGTCCATCCAGCCATT+TGG 0.409540 8_4:+30440671 None:intergenic
CAATTTCTATTTAAAGGCAT+GGG 0.424203 8_4:-30441440 Msa1322900:five_prime_UTR
GAAATAGAAGAAAGAAACTA+GGG 0.428379 8_4:+30441389 None:intergenic
ATCATTGAAGTAATTGATAA+TGG 0.438898 8_4:-30440758 Msa1322900:CDS
GCAATTTCTATTTAAAGGCA+TGG 0.443301 8_4:-30441441 Msa1322900:five_prime_UTR
ATGGCAGTGGAGCTGCAAAA+TGG 0.452179 8_4:-30440733 Msa1322900:CDS
AAACTCACTTTCAAGCTCTT+CGG 0.455962 8_4:-30440818 Msa1322900:CDS
AATGGCTGGATGGACTTGTT+AGG 0.459576 8_4:-30440668 Msa1322900:CDS
AAACACTGGACTTATGTCAT+AGG 0.470664 8_4:-30441180 Msa1322900:intron
TGATCTTAGTTTGAATGTGC+TGG 0.474089 8_4:-30440496 Msa1322900:three_prime_UTR
AGAAATAGAAGAAAGAAACT+AGG 0.481456 8_4:+30441388 None:intergenic
AACTTCATGAAGGTGAAGAT+TGG 0.494334 8_4:-30441221 Msa1322900:CDS
AGACATTGATGAGCACTATA+AGG 0.495099 8_4:-30440792 Msa1322900:CDS
AAGTAACAAATATGTTGTAA+TGG 0.503472 8_4:-30440590 Msa1322900:three_prime_UTR
AGATTGGCATCACACTGATT+CGG 0.519723 8_4:-30441205 Msa1322900:CDS
ATATTGACCCTCCAAATGGC+TGG 0.527845 8_4:-30440682 Msa1322900:CDS
GAGGATATTGACCCTCCAAA+TGG 0.539495 8_4:-30440686 Msa1322900:CDS
GGTAAACTTAGTACTGAACT+TGG 0.549891 8_4:-30441333 Msa1322900:CDS
AAGTCCATCCAGCCATTTGG+AGG 0.551025 8_4:+30440674 None:intergenic
CTCACTTTCAAGCTCTTCGG+TGG 0.553344 8_4:-30440815 Msa1322900:CDS
TGACATCACAACAGATGGTA+AGG 0.554203 8_4:-30440885 Msa1322900:intron
CATTCAGAAATGGTGCTCGC+CGG 0.555555 8_4:-30441354 Msa1322900:exon
ATTGATAATGGTGATGGCAG+TGG 0.556824 8_4:-30440746 Msa1322900:CDS
TGACCCTCCAAATGGCTGGA+TGG 0.557517 8_4:-30440678 Msa1322900:CDS
ATTGATCTTCTCATATTCAA+CGG 0.576809 8_4:+30440709 None:intergenic
GTTGATGCTCATCTTGTCAA+AGG 0.600604 8_4:-30440629 Msa1322900:CDS
AATTTCTATTTAAAGGCATG+GGG 0.609757 8_4:-30441439 Msa1322900:five_prime_UTR
ATATTCGTAAAAGCATACAT+TGG 0.610956 8_4:-30440526 Msa1322900:three_prime_UTR
ACACTGATTCGGTTAAACAC+TGG 0.614381 8_4:-30441194 Msa1322900:CDS
GAAGTAATTGATAATGGTGA+TGG 0.618480 8_4:-30440752 Msa1322900:CDS
TAGTTTGAAGAACTTGTCGA+CGG 0.618944 8_4:+30441299 None:intergenic
GTAAACTTAGTACTGAACTT+GGG 0.625486 8_4:-30441332 Msa1322900:CDS
AGTTTGAAGAACTTGTCGAC+GGG 0.627390 8_4:+30441300 None:intergenic
CATGGTGCCAAACTTCATGA+AGG 0.632424 8_4:-30441231 Msa1322900:CDS
AGTCCATCCAGCCATTTGGA+GGG 0.644461 8_4:+30440675 None:intergenic
TGAATATGAGAAGATCAATG+AGG 0.699788 8_4:-30440705 Msa1322900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATAAACAAGATGATA+TGG + chr8_4:30440706-30440725 None:intergenic 15.0%
!! ATAGAGTTATGAAAAATATA+TGG + chr8_4:30440887-30440906 None:intergenic 15.0%
!!! ATACACTGTTTTAATTTAAT+TGG - chr8_4:30440907-30440926 Msa1322900:intron 15.0%
!! TATAAATAAACAAGATGATA+TGG + chr8_4:30440706-30440725 None:intergenic 15.0%
!! ATAGAGTTATGAAAAATATA+TGG + chr8_4:30440887-30440906 None:intergenic 15.0%
!!! ATACACTGTTTTAATTTAAT+TGG - chr8_4:30440907-30440926 Msa1322900:intron 15.0%
!! GTAATGCAATTTCTATTTAA+AGG - chr8_4:30440382-30440401 Msa1322900:three_prime_UTR 20.0%
!! TGCTCTTATTAATTGAATTA+AGG + chr8_4:30440736-30440755 None:intergenic 20.0%
!!! AATTCAATTAATAAGAGCAT+AGG - chr8_4:30440737-30440756 Msa1322900:CDS 20.0%
!!! ATTCAATTAATAAGAGCATA+GGG - chr8_4:30440738-30440757 Msa1322900:CDS 20.0%
!! CATAATCTTCTTATAAAGTA+TGG + chr8_4:30440765-30440784 None:intergenic 20.0%
!! ACTTTATCTTTATCATCTTT+AGG + chr8_4:30440789-30440808 None:intergenic 20.0%
!! ATCATTGAAGTAATTGATAA+TGG - chr8_4:30441070-30441089 Msa1322900:intron 20.0%
!! AAGTAACAAATATGTTGTAA+TGG - chr8_4:30441238-30441257 Msa1322900:CDS 20.0%
!!! ATTTTTGTAACAACCAATAT+TGG - chr8_4:30441443-30441462 Msa1322900:five_prime_UTR 20.0%
!! GTAATGCAATTTCTATTTAA+AGG - chr8_4:30440382-30440401 Msa1322900:three_prime_UTR 20.0%
!! TGCTCTTATTAATTGAATTA+AGG + chr8_4:30440736-30440755 None:intergenic 20.0%
!!! AATTCAATTAATAAGAGCAT+AGG - chr8_4:30440737-30440756 Msa1322900:CDS 20.0%
!!! ATTCAATTAATAAGAGCATA+GGG - chr8_4:30440738-30440757 Msa1322900:CDS 20.0%
!! CATAATCTTCTTATAAAGTA+TGG + chr8_4:30440765-30440784 None:intergenic 20.0%
!! ACTTTATCTTTATCATCTTT+AGG + chr8_4:30440789-30440808 None:intergenic 20.0%
!! ATCATTGAAGTAATTGATAA+TGG - chr8_4:30441070-30441089 Msa1322900:intron 20.0%
!! AAGTAACAAATATGTTGTAA+TGG - chr8_4:30441238-30441257 Msa1322900:CDS 20.0%
!!! ATTTTTGTAACAACCAATAT+TGG - chr8_4:30441443-30441462 Msa1322900:five_prime_UTR 20.0%
!! CAATTTCTATTTAAAGGCAT+GGG - chr8_4:30440388-30440407 Msa1322900:three_prime_UTR 25.0%
!! AATTTCTATTTAAAGGCATG+GGG - chr8_4:30440389-30440408 Msa1322900:three_prime_UTR 25.0%
! GAAATAGAAGAAAGAAACTA+GGG + chr8_4:30440442-30440461 None:intergenic 25.0%
! AGAAATAGAAGAAAGAAACT+AGG + chr8_4:30440443-30440462 None:intergenic 25.0%
!!! CTTTTTGTTTCATTCAGAAA+TGG - chr8_4:30440464-30440483 Msa1322900:three_prime_UTR 25.0%
! AATAAACAAGATGATATGGA+GGG + chr8_4:30440702-30440721 None:intergenic 25.0%
! AAATAAACAAGATGATATGG+AGG + chr8_4:30440703-30440722 None:intergenic 25.0%
! ATTGATCTTCTCATATTCAA+CGG + chr8_4:30441122-30441141 None:intergenic 25.0%
!! ATATTCGTAAAAGCATACAT+TGG - chr8_4:30441302-30441321 Msa1322900:CDS 25.0%
!!! CAATATTGGTGTTTTTTTCT+CGG - chr8_4:30441457-30441476 Msa1322900:five_prime_UTR 25.0%
!! CAATTTCTATTTAAAGGCAT+GGG - chr8_4:30440388-30440407 Msa1322900:three_prime_UTR 25.0%
!! AATTTCTATTTAAAGGCATG+GGG - chr8_4:30440389-30440408 Msa1322900:three_prime_UTR 25.0%
! GAAATAGAAGAAAGAAACTA+GGG + chr8_4:30440442-30440461 None:intergenic 25.0%
! AGAAATAGAAGAAAGAAACT+AGG + chr8_4:30440443-30440462 None:intergenic 25.0%
!!! CTTTTTGTTTCATTCAGAAA+TGG - chr8_4:30440464-30440483 Msa1322900:three_prime_UTR 25.0%
! AATAAACAAGATGATATGGA+GGG + chr8_4:30440702-30440721 None:intergenic 25.0%
! AAATAAACAAGATGATATGG+AGG + chr8_4:30440703-30440722 None:intergenic 25.0%
! ATTGATCTTCTCATATTCAA+CGG + chr8_4:30441122-30441141 None:intergenic 25.0%
!! ATATTCGTAAAAGCATACAT+TGG - chr8_4:30441302-30441321 Msa1322900:CDS 25.0%
GCAATTTCTATTTAAAGGCA+TGG - chr8_4:30440387-30440406 Msa1322900:three_prime_UTR 30.0%
! GGTTGATATTATGATGAAAC+TGG + chr8_4:30440421-30440440 None:intergenic 30.0%
AAGTTCAGTACTAAGTTTAC+CGG + chr8_4:30440496-30440515 None:intergenic 30.0%
! GTAAACTTAGTACTGAACTT+GGG - chr8_4:30440496-30440515 Msa1322900:three_prime_UTR 30.0%
!! GAAGTAATTGATAATGGTGA+TGG - chr8_4:30441076-30441095 Msa1322900:intron 30.0%
TGAATATGAGAAGATCAATG+AGG - chr8_4:30441123-30441142 Msa1322900:intron 30.0%
CGAGAAAAAAACACCAATAT+TGG + chr8_4:30441459-30441478 None:intergenic 30.0%
GCAATTTCTATTTAAAGGCA+TGG - chr8_4:30440387-30440406 Msa1322900:three_prime_UTR 30.0%
! GGTTGATATTATGATGAAAC+TGG + chr8_4:30440421-30440440 None:intergenic 30.0%
AAGTTCAGTACTAAGTTTAC+CGG + chr8_4:30440496-30440515 None:intergenic 30.0%
! GTAAACTTAGTACTGAACTT+GGG - chr8_4:30440496-30440515 Msa1322900:three_prime_UTR 30.0%
!! GAAGTAATTGATAATGGTGA+TGG - chr8_4:30441076-30441095 Msa1322900:intron 30.0%
TGAATATGAGAAGATCAATG+AGG - chr8_4:30441123-30441142 Msa1322900:intron 30.0%
CGAGAAAAAAACACCAATAT+TGG + chr8_4:30441459-30441478 None:intergenic 30.0%
! GGTAAACTTAGTACTGAACT+TGG - chr8_4:30440495-30440514 Msa1322900:three_prime_UTR 35.0%
TAGTTTGAAGAACTTGTCGA+CGG + chr8_4:30440532-30440551 None:intergenic 35.0%
AACATTAGCGAAAGAGTTCA+TGG - chr8_4:30440579-30440598 Msa1322900:three_prime_UTR 35.0%
ATCTTCACCTTCATGAAGTT+TGG + chr8_4:30440607-30440626 None:intergenic 35.0%
AACTTCATGAAGGTGAAGAT+TGG - chr8_4:30440607-30440626 Msa1322900:exon 35.0%
AAACACTGGACTTATGTCAT+AGG - chr8_4:30440648-30440667 Msa1322900:CDS 35.0%
AAACTCACTTTCAAGCTCTT+CGG - chr8_4:30441010-30441029 Msa1322900:intron 35.0%
AGACATTGATGAGCACTATA+AGG - chr8_4:30441036-30441055 Msa1322900:intron 35.0%
! TGATCTTAGTTTGAATGTGC+TGG - chr8_4:30441332-30441351 Msa1322900:CDS 35.0%
! GGTAAACTTAGTACTGAACT+TGG - chr8_4:30440495-30440514 Msa1322900:three_prime_UTR 35.0%
TAGTTTGAAGAACTTGTCGA+CGG + chr8_4:30440532-30440551 None:intergenic 35.0%
AACATTAGCGAAAGAGTTCA+TGG - chr8_4:30440579-30440598 Msa1322900:three_prime_UTR 35.0%
ATCTTCACCTTCATGAAGTT+TGG + chr8_4:30440607-30440626 None:intergenic 35.0%
AACTTCATGAAGGTGAAGAT+TGG - chr8_4:30440607-30440626 Msa1322900:exon 35.0%
AAACACTGGACTTATGTCAT+AGG - chr8_4:30440648-30440667 Msa1322900:CDS 35.0%
AAACTCACTTTCAAGCTCTT+CGG - chr8_4:30441010-30441029 Msa1322900:intron 35.0%
AGACATTGATGAGCACTATA+AGG - chr8_4:30441036-30441055 Msa1322900:intron 35.0%
! TGATCTTAGTTTGAATGTGC+TGG - chr8_4:30441332-30441351 Msa1322900:CDS 35.0%
AGTTTGAAGAACTTGTCGAC+GGG + chr8_4:30440531-30440550 None:intergenic 40.0%
! AGATTGGCATCACACTGATT+CGG - chr8_4:30440623-30440642 Msa1322900:CDS 40.0%
!! ACACTGATTCGGTTAAACAC+TGG - chr8_4:30440634-30440653 Msa1322900:CDS 40.0%
ACCATCTGTTGTGATGTCAA+GGG + chr8_4:30440942-30440961 None:intergenic 40.0%
TACCATCTGTTGTGATGTCA+AGG + chr8_4:30440943-30440962 None:intergenic 40.0%
TGACATCACAACAGATGGTA+AGG - chr8_4:30440943-30440962 Msa1322900:intron 40.0%
!! ATTGATAATGGTGATGGCAG+TGG - chr8_4:30441082-30441101 Msa1322900:intron 40.0%
GTTGATGCTCATCTTGTCAA+AGG - chr8_4:30441199-30441218 Msa1322900:CDS 40.0%
AGTTTGAAGAACTTGTCGAC+GGG + chr8_4:30440531-30440550 None:intergenic 40.0%
! AGATTGGCATCACACTGATT+CGG - chr8_4:30440623-30440642 Msa1322900:CDS 40.0%
!! ACACTGATTCGGTTAAACAC+TGG - chr8_4:30440634-30440653 Msa1322900:CDS 40.0%
ACCATCTGTTGTGATGTCAA+GGG + chr8_4:30440942-30440961 None:intergenic 40.0%
TACCATCTGTTGTGATGTCA+AGG + chr8_4:30440943-30440962 None:intergenic 40.0%
TGACATCACAACAGATGGTA+AGG - chr8_4:30440943-30440962 Msa1322900:intron 40.0%
!! ATTGATAATGGTGATGGCAG+TGG - chr8_4:30441082-30441101 Msa1322900:intron 40.0%
GTTGATGCTCATCTTGTCAA+AGG - chr8_4:30441199-30441218 Msa1322900:CDS 40.0%
! CATGGTGCCAAACTTCATGA+AGG - chr8_4:30440597-30440616 Msa1322900:exon 45.0%
GAGGATATTGACCCTCCAAA+TGG - chr8_4:30441142-30441161 Msa1322900:intron 45.0%
ATATTGACCCTCCAAATGGC+TGG - chr8_4:30441146-30441165 Msa1322900:intron 45.0%
AACAAGTCCATCCAGCCATT+TGG + chr8_4:30441160-30441179 None:intergenic 45.0%
! AATGGCTGGATGGACTTGTT+AGG - chr8_4:30441160-30441179 Msa1322900:intron 45.0%
! CATGGTGCCAAACTTCATGA+AGG - chr8_4:30440597-30440616 Msa1322900:exon 45.0%
GAGGATATTGACCCTCCAAA+TGG - chr8_4:30441142-30441161 Msa1322900:intron 45.0%
ATATTGACCCTCCAAATGGC+TGG - chr8_4:30441146-30441165 Msa1322900:intron 45.0%
AACAAGTCCATCCAGCCATT+TGG + chr8_4:30441160-30441179 None:intergenic 45.0%
! AATGGCTGGATGGACTTGTT+AGG - chr8_4:30441160-30441179 Msa1322900:intron 45.0%
CATTCAGAAATGGTGCTCGC+CGG - chr8_4:30440474-30440493 Msa1322900:three_prime_UTR 50.0%
GCCCTTGACATCACAACAGA+TGG - chr8_4:30440938-30440957 Msa1322900:intron 50.0%
CTCACTTTCAAGCTCTTCGG+TGG - chr8_4:30441013-30441032 Msa1322900:intron 50.0%
ATGGCAGTGGAGCTGCAAAA+TGG - chr8_4:30441095-30441114 Msa1322900:intron 50.0%
AGTCCATCCAGCCATTTGGA+GGG + chr8_4:30441156-30441175 None:intergenic 50.0%
AAGTCCATCCAGCCATTTGG+AGG + chr8_4:30441157-30441176 None:intergenic 50.0%
CATTCAGAAATGGTGCTCGC+CGG - chr8_4:30440474-30440493 Msa1322900:three_prime_UTR 50.0%
GCCCTTGACATCACAACAGA+TGG - chr8_4:30440938-30440957 Msa1322900:intron 50.0%
CTCACTTTCAAGCTCTTCGG+TGG - chr8_4:30441013-30441032 Msa1322900:intron 50.0%
ATGGCAGTGGAGCTGCAAAA+TGG - chr8_4:30441095-30441114 Msa1322900:intron 50.0%
AGTCCATCCAGCCATTTGGA+GGG + chr8_4:30441156-30441175 None:intergenic 50.0%
AAGTCCATCCAGCCATTTGG+AGG + chr8_4:30441157-30441176 None:intergenic 50.0%
TGACCCTCCAAATGGCTGGA+TGG - chr8_4:30441150-30441169 Msa1322900:intron 55.0%
TGACCCTCCAAATGGCTGGA+TGG - chr8_4:30441150-30441169 Msa1322900:intron 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 30440371 30441479 30440371 ID=Msa1322900;Name=Msa1322900
chr8_4 mRNA 30440371 30441479 30440371 ID=Msa1322900-mRNA-1;Parent=Msa1322900;Name=Msa1322900-mRNA-1;_AED=0.37;_eAED=0.37;_QI=112|1|1|1|1|1|2|245|154
chr8_4 exon 30440371 30440893 30440371 ID=Msa1322900-mRNA-1:exon:10117;Parent=Msa1322900-mRNA-1
chr8_4 exon 30441181 30441479 30441181 ID=Msa1322900-mRNA-1:exon:10116;Parent=Msa1322900-mRNA-1
chr8_4 five_prime_UTR 30441368 30441479 30441368 ID=Msa1322900-mRNA-1:five_prime_utr;Parent=Msa1322900-mRNA-1
chr8_4 CDS 30441181 30441367 30441181 ID=Msa1322900-mRNA-1:cds;Parent=Msa1322900-mRNA-1
chr8_4 CDS 30440616 30440893 30440616 ID=Msa1322900-mRNA-1:cds;Parent=Msa1322900-mRNA-1
chr8_4 three_prime_UTR 30440371 30440615 30440371 ID=Msa1322900-mRNA-1:three_prime_utr;Parent=Msa1322900-mRNA-1
Gene Sequence

>Msa1322900

ATGGTGCTCGCCGGTAAACTTAGTACTGAACTTGGGATCAAAACACCCGTCGACAAGTTCTTCAAACTATTTGCATCAGAACTTCACGAAGTGCAAAACATTAGCGAAAGAGTTCATGGTGCCAAACTTCATGAAGGTGAAGATTGGCATCACACTGATTCGGTTAAACACTGGACTTATGTCATAGATGGTAAGGTACACACATGTCATGAGAGTATCGAAGTTGATGAACAGAACAAAAAACTCACTTTCAAGCTCTTCGGTGGAGACATTGATGAGCACTATAAGGTCTTTAATGTGATCATTGAAGTAATTGATAATGGTGATGGCAGTGGAGCTGCAAAATGGACCGTTGAATATGAGAAGATCAATGAGGATATTGACCCTCCAAATGGCTGGATGGACTTGTTAGGCAAAGTCACTCGAGAAGTTGATGCTCATCTTGTCAAAGGCGCAAAGTCATAA
Protein sequence

>Msa1322900

MVLAGKLSTELGIKTPVDKFFKLFASELHEVQNISERVHGAKLHEGEDWHHTDSVKHWTYVIDGKVHTCHESIEVDEQNKKLTFKLFGGDIDEHYKVFNVIIEVIDNGDGSGAAKWTVEYEKINEDIDPPNGWMDLLGKVTREVDAHLVKGAKS*