AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331620 MtrunA17_Chr4g0061421 96.729 642 16 3 1 639 1 640 0.0 1254
Msa1331620 MtrunA17_Chr3g0113421 63.158 152 18 3 483 632 9 124 9.52e-31 117
Msa1331620 MtrunA17_Chr7g0269901 31.224 237 111 10 9 230 97 296 1.16e-16 84.0
Msa1331620 MtrunA17_Chr3g0142871 31.224 237 111 10 9 230 97 296 1.62e-16 83.6
Msa1331620 MtrunA17_Chr7g0271891 45.588 68 37 0 8 75 16 83 1.52e-15 74.7
Msa1331620 MtrunA17_Chr8g0344721 53.731 67 29 1 10 74 12 78 3.99e-14 72.4
Msa1331620 MtrunA17_Chr4g0044331 50.000 62 31 0 14 75 18 79 4.69e-13 67.4
Msa1331620 MtrunA17_Chr1g0209551 34.899 149 79 5 2 149 10 141 4.83e-12 68.6
Msa1331620 MtrunA17_Chr6g0460381 50.000 64 31 1 9 71 4 67 2.99e-11 63.2
Msa1331620 MtrunA17_Chr2g0333221 38.462 104 56 2 9 109 71 169 7.38e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331620 AT1G74250.1 49.927 683 245 16 1 639 1 630 3.39e-180 525
Msa1331620 AT3G11450.1 28.099 242 126 7 2 230 93 299 6.09e-15 79.0
Msa1331620 AT3G14200.1 53.846 65 29 1 10 74 14 77 2.83e-13 70.1
Msa1331620 AT1G56300.2 38.356 73 45 0 2 74 7 79 1.16e-12 65.5
Msa1331620 AT1G56300.1 38.356 73 45 0 2 74 7 79 1.40e-12 66.2
Msa1331620 AT1G71000.1 41.892 74 43 0 1 74 1 74 8.76e-12 64.3
Msa1331620 AT1G71000.2 41.892 74 43 0 1 74 1 74 8.91e-12 64.3
Msa1331620 AT5G25530.2 35.345 116 59 5 9 112 5 116 1.34e-11 67.0
Msa1331620 AT5G06110.1 28.185 259 120 10 9 251 101 309 2.90e-11 67.0
Msa1331620 AT5G06110.2 28.185 259 120 10 9 251 101 309 2.90e-11 67.0
Msa1331620 AT1G59980.2 44.595 74 37 1 6 79 21 90 8.67e-11 64.7

Find 186 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCCTCTTATGGGGAATT+TGG 0.141158 8_4:+51190996 Msa1331620:CDS
TGTTGCTTCGATAAACAATT+AGG 0.166260 8_4:-51190536 None:intergenic
CGAAGCCACCGCTCAGTTTC+AGG 0.199966 8_4:+51190702 Msa1331620:CDS
ACGGAGTTAGACTTTGAATT+TGG 0.225449 8_4:-51190811 None:intergenic
ATATGCGACTACTTCAATTT+TGG 0.237735 8_4:+51193032 Msa1331620:three_prime_UTR
TATGAAGGTGAAGAAGAATT+TGG 0.247762 8_4:+51191251 Msa1331620:CDS
TTGCTAAGAAATTAGGTTTA+GGG 0.251194 8_4:+51190956 Msa1331620:CDS
TGTTAGACAGGCTCCTCTTA+TGG 0.265835 8_4:+51190987 Msa1331620:CDS
GGCGTTGGAGAGCGAGTTTC+CGG 0.265860 8_4:-51190642 None:intergenic
TTTGCTAAGAAATTAGGTTT+AGG 0.269838 8_4:+51190955 Msa1331620:CDS
TGGCGTTGGGGTTGATGATT+TGG 0.280098 8_4:+51191635 Msa1331620:CDS
TGATGTGTTTGATAAAATTC+AGG 0.297358 8_4:+51190918 Msa1331620:CDS
AATTGAAGTAGTCGCATATC+TGG 0.303758 8_4:-51193028 None:intergenic
GAGAAGAATGTAATCAATAT+TGG 0.312751 8_4:+51192158 Msa1331620:CDS
GTTCTTGAAACAATGGTATC+TGG 0.319682 8_4:+51191837 Msa1331620:CDS
TTCCGGTAAGGGTTTCTATA+AGG 0.322734 8_4:+51190888 Msa1331620:CDS
GTTGCTTCGATAAACAATTA+GGG 0.333342 8_4:-51190535 None:intergenic
GATGTTGATGATGATGAAAT+TGG 0.336996 8_4:+51191906 Msa1331620:CDS
CCTGATTTGACGAGCTTGTC+AGG 0.337742 8_4:-51190667 None:intergenic
TGTTTAGATATCTAATGTTA+TGG 0.351979 8_4:+51193240 Msa1331620:three_prime_UTR
GTTAGACAGGCTCCTCTTAT+GGG 0.353059 8_4:+51190988 Msa1331620:CDS
ATGTCTATGAAAATAGTTTA+CGG 0.353143 8_4:+51193357 Msa1331620:three_prime_UTR
TTCTTGGATTAGAGAAATCT+TGG 0.357865 8_4:+51192750 Msa1331620:intron
AACCTCCGCGACTTCCTATT+CGG 0.359713 8_4:-51191120 None:intergenic
GTTCATAAGGGTATGGATAC+AGG 0.366618 8_4:+51193135 Msa1331620:three_prime_UTR
AAGAACTCCGATCAGCTTAC+CGG 0.367180 8_4:+51190623 Msa1331620:CDS
GGGCTTGTGTGTTGAAGCAC+TGG 0.368221 8_4:-51191970 None:intergenic
GATGGAGGAAGAGAATAATA+AGG 0.374112 8_4:+51191143 Msa1331620:CDS
TAGGAAGTCGCGGAGGTTGA+TGG 0.374440 8_4:+51191125 Msa1331620:CDS
CTTCTGTCGTCGTCAACCTC+AGG 0.376304 8_4:+51190473 Msa1331620:five_prime_UTR
ATGTTGATGATGATGAAATT+GGG 0.378497 8_4:+51191907 Msa1331620:CDS
CCTGACAAGCTCGTCAAATC+AGG 0.380161 8_4:+51190667 Msa1331620:CDS
TAAGCTGATCGGAGTTCTTC+CGG 0.384438 8_4:-51190619 None:intergenic
TCATCAACCTTAGCCCAATC+AGG 0.385687 8_4:-51191360 None:intergenic
CTGAAACTGAGCGGTGGCTT+CGG 0.388334 8_4:-51190701 None:intergenic
GAAGGAGAGGAAGAGGAAGT+TGG 0.396116 8_4:+51191299 Msa1331620:CDS
AGGAGGAGAAGGAGAGGAAG+AGG 0.399336 8_4:+51191292 Msa1331620:CDS
TCGTACCAAGCTCGTTCCTT+TGG 0.399711 8_4:-51190757 None:intergenic
TATTTATGCCACAGTTCATA+AGG 0.401824 8_4:+51193122 Msa1331620:three_prime_UTR
TTCTGGAAACAATAGTGAAA+TGG 0.405064 8_4:+51193311 Msa1331620:three_prime_UTR
GAAGAAGATTTCAAATCAAC+CGG 0.408421 8_4:+51192277 Msa1331620:CDS
TGGCTTATGAGGAGCCTGAT+TGG 0.409460 8_4:+51191346 Msa1331620:CDS
GAAACTAATGTGCCTACTAA+TGG 0.414627 8_4:+51192128 Msa1331620:CDS
AAAGTGAGGAGGATGGCGTT+GGG 0.416761 8_4:+51191622 Msa1331620:CDS
GGAGAAAGTTGCCGAGTTCA+AGG 0.421000 8_4:+51191518 Msa1331620:CDS
GGTGAGGAGGAAGGCGAAGA+GGG 0.422169 8_4:+51191164 Msa1331620:CDS
TAAGAGAGTGATTGATATGA+AGG 0.428180 8_4:+51191236 Msa1331620:CDS
TTCTCACTCTCAATTTGAGT+TGG 0.428513 8_4:-51192008 None:intergenic
ATCCGAAAACCCCGAAAATA+CGG 0.430044 8_4:-51190866 None:intergenic
TAGTCCTTATGCGCAGGTTA+CGG 0.433863 8_4:+51191020 Msa1331620:CDS
AGGGATTGATTCTGTTAGAC+AGG 0.434136 8_4:+51190975 Msa1331620:CDS
GAAGTTGGAGATGGAGAGGA+AGG 0.434700 8_4:+51191314 Msa1331620:CDS
TTCGAGGAAAATGAGGATAA+TGG 0.435391 8_4:+51192221 Msa1331620:CDS
GCAGAAGACGAGAGTGCAAA+TGG 0.435707 8_4:+51191687 Msa1331620:CDS
GGAGAGGGCTATGGCTTATG+AGG 0.439385 8_4:+51191335 Msa1331620:CDS
AAAGCCGTAACCTGCGCATA+AGG 0.439715 8_4:-51191024 None:intergenic
TAAATTGTAGCTCAGCCTTC+CGG 0.440662 8_4:+51193087 Msa1331620:three_prime_UTR
AGAAGTTGAGGATTTGTATG+AGG 0.441764 8_4:+51191386 Msa1331620:CDS
AACCTTATAGAAACCCTTAC+CGG 0.442360 8_4:-51190890 None:intergenic
CGATGCCACTACGAAGTTCT+CGG 0.443193 8_4:+51190577 Msa1331620:CDS
AAAATAGAATGAACTCCATC+TGG 0.446254 8_4:-51193290 None:intergenic
GGCTTATGAGGAGCCTGATT+GGG 0.449241 8_4:+51191347 Msa1331620:CDS
GGGTGAGATCTATTGAAATT+CGG 0.451094 8_4:-51193164 None:intergenic
GAAGAAGAAAGAGGAGGAGA+AGG 0.462080 8_4:+51191281 Msa1331620:CDS
TTCTCATATTTGCCATTAGT+AGG 0.462771 8_4:-51192140 None:intergenic
TGGTATCTGGGCACAAGGGC+CGG 0.463969 8_4:+51191850 Msa1331620:CDS
CGAGCTTGTCAGGGTGGCGT+TGG 0.466381 8_4:-51190657 None:intergenic
AGTTTAAGAGTGAGAAGCAA+TGG 0.469035 8_4:+51191466 Msa1331620:CDS
TGAAAGTGAAGGGGTTGGAG+AGG 0.470038 8_4:+51191590 Msa1331620:CDS
GAAGGTGAAAGTGAAGGGGT+TGG 0.476024 8_4:+51191585 Msa1331620:CDS
CTATCCAAATTCCCCATAAG+AGG 0.477965 8_4:-51191000 None:intergenic
GAATGATGGGGTTGGTGCTA+TGG 0.478029 8_4:+51192034 Msa1331620:CDS
GTCTAGTTCCCAATATTTCG+AGG 0.480169 8_4:+51192205 Msa1331620:CDS
CCAATATTTCGAGGAAAATG+AGG 0.482316 8_4:+51192214 Msa1331620:CDS
GTTCTTGAAGCAATGCTGGC+TGG 0.482368 8_4:+51191930 Msa1331620:CDS
TGGGGTTCTTGAAGCAATGC+TGG 0.483544 8_4:+51191926 Msa1331620:CDS
GAGGAAGAGGAAGTTGGAGA+TGG 0.484765 8_4:+51191305 Msa1331620:CDS
GAAAGTGAGGAGGATGGCGT+TGG 0.484850 8_4:+51191621 Msa1331620:CDS
ATTTATGCCACAGTTCATAA+GGG 0.489773 8_4:+51193123 Msa1331620:three_prime_UTR
GAATAATAAGGTGAGGAGGA+AGG 0.491971 8_4:+51191155 Msa1331620:CDS
CATAAACATCTGAGCGACTC+TGG 0.492233 8_4:+51192924 Msa1331620:CDS
TGCCACAGTTCATAAGGGTA+TGG 0.496764 8_4:+51193128 Msa1331620:three_prime_UTR
AGTTGGAGTTTCAGAAGCCT+CGG 0.497718 8_4:-51191991 None:intergenic
TCATTGTCACCATCATCATT+CGG 0.500186 8_4:-51191717 None:intergenic
GGCTTGTGTGTTGAAGCACT+GGG 0.501875 8_4:-51191969 None:intergenic
CAGAAGACGAGAGTGCAAAT+GGG 0.506677 8_4:+51191688 Msa1331620:CDS
AGAAAGAGGAGGAGAAGGAG+AGG 0.506886 8_4:+51191286 Msa1331620:CDS
AGAGGAAGTTGGAGATGGAG+AGG 0.510470 8_4:+51191310 Msa1331620:CDS
AGAGGAGAGATTAGAAAGTG+AGG 0.511041 8_4:+51191608 Msa1331620:CDS
GCAATGGAATCGAGATCTAT+CGG 0.514559 8_4:+51193383 Msa1331620:three_prime_UTR
AAAATCTGTAATAAGAGTAT+TGG 0.516505 8_4:+51193449 Msa1331620:three_prime_UTR
ACGAGGAAGGTGAAAGTGAA+GGG 0.517150 8_4:+51191580 Msa1331620:CDS
GACGAGGAAGGTGAAAGTGA+AGG 0.520922 8_4:+51191579 Msa1331620:CDS
GCAGCAATGAAAAGTCGATA+AGG 0.521221 8_4:+51192951 Msa1331620:CDS
GAGAGTGAGAATGAGAATGA+TGG 0.521962 8_4:+51192020 Msa1331620:CDS
GTTTGAGAAGAAAGATGAGA+AGG 0.522115 8_4:+51191416 Msa1331620:CDS
TGGATCGGAGAGTACCTCAT+AGG 0.522444 8_4:-51190737 None:intergenic
TGAGCAGAGTAAGAAGCATA+AGG 0.522481 8_4:+51191497 Msa1331620:CDS
TGGAGATGGAGAGGAAGGAG+AGG 0.522737 8_4:+51191319 Msa1331620:CDS
AGATTAGAAAGTGAGGAGGA+TGG 0.523209 8_4:+51191615 Msa1331620:CDS
GGTTGATGAAGAAGAAGTTG+AGG 0.524241 8_4:+51191374 Msa1331620:CDS
CGAAGCAACAATGGCATCGA+CGG 0.524518 8_4:+51190549 Msa1331620:exon
TTCTGTCGTCGTCAACCTCA+GGG 0.524893 8_4:+51190474 Msa1331620:five_prime_UTR
CATTCTCATCAAAATCAAAC+CGG 0.526287 8_4:-51191869 None:intergenic
ATAAATAACATGCTTTCTGC+CGG 0.530799 8_4:-51193106 None:intergenic
CGAGTTTCCGGTAAGCTGAT+CGG 0.532549 8_4:-51190630 None:intergenic
TCGATAAGGAAAATATACTA+AGG 0.533085 8_4:+51192965 Msa1331620:exon
TGAGGAGCCTGATTGGGCTA+AGG 0.533690 8_4:+51191353 Msa1331620:CDS
AGGTGAGGAGGAAGGCGAAG+AGG 0.534213 8_4:+51191163 Msa1331620:CDS
TTCTTGAAACAATGGTATCT+GGG 0.534518 8_4:+51191838 Msa1331620:CDS
GGTGAAGAAGAATTTGGAGA+TGG 0.534575 8_4:+51191257 Msa1331620:CDS
AGAGTGAGAATGAGAATGAT+GGG 0.534818 8_4:+51192021 Msa1331620:CDS
GGAGAGGAAGGAGAGGGCTA+TGG 0.537823 8_4:+51191326 Msa1331620:CDS
AGAGGAGTTAGAAGCTGAAG+TGG 0.540411 8_4:+51191557 Msa1331620:CDS
GTTAGACTTTGAATTTGGAT+CGG 0.547048 8_4:-51190806 None:intergenic
GGAGATGGAGAAGAAGAAAG+AGG 0.547787 8_4:+51191272 Msa1331620:CDS
TTGAATTTGGATCGGAGAAG+AGG 0.548637 8_4:-51190798 None:intergenic
AATGTAATCAATATTGGAGA+TGG 0.550622 8_4:+51192164 Msa1331620:CDS
TGTAATAAGAGTATTGGTGC+TGG 0.551876 8_4:+51193455 Msa1331620:three_prime_UTR
CAATGGAATCGAGATCTATC+GGG 0.552754 8_4:+51193384 Msa1331620:three_prime_UTR
GGAGATGGAGAGGAAGGAGA+GGG 0.552905 8_4:+51191320 Msa1331620:CDS
GATGAGTATGATGCGATGGC+AGG 0.553346 8_4:+51191096 Msa1331620:CDS
GAAGAGGATTTGAGAACGAT+GGG 0.554440 8_4:-51190782 None:intergenic
CCAAGCTCGTTCCTTTGGAT+CGG 0.555573 8_4:-51190752 None:intergenic
GTTGGAGTTTCAGAAGCCTC+GGG 0.557564 8_4:-51191990 None:intergenic
AGAAGAGGATTTGAGAACGA+TGG 0.558151 8_4:-51190783 None:intergenic
CCGATCCAAAGGAACGAGCT+TGG 0.558363 8_4:+51190752 Msa1331620:CDS
GGAGAGATTAGAAAGTGAGG+AGG 0.558505 8_4:+51191611 Msa1331620:CDS
AAATAGTTTACGGATGGCAA+TGG 0.559656 8_4:+51193367 Msa1331620:three_prime_UTR
GTTAGAAGCTGAAGTGGACG+AGG 0.565424 8_4:+51191563 Msa1331620:CDS
CGAAAACAGGTCAGGGACAA+CGG 0.566006 8_4:-51190830 None:intergenic
TTTGGATAGTCCTTATGCGC+AGG 0.567782 8_4:+51191014 Msa1331620:CDS
GAGCAAAGAAAGAGAAGGGT+GGG 0.568242 8_4:+51192093 Msa1331620:CDS
AACAATGGTATCTGGGCACA+AGG 0.568483 8_4:+51191845 Msa1331620:CDS
AAGAGAATAATAAGGTGAGG+AGG 0.569009 8_4:+51191151 Msa1331620:CDS
AATGGAATCTTAGCAAGCAC+AGG 0.570316 8_4:+51193329 Msa1331620:three_prime_UTR
TCTACCTCGCGAATGCTCAC+CGG 0.571563 8_4:+51190600 Msa1331620:CDS
CTGATTTGACGAGCTTGTCA+GGG 0.572375 8_4:-51190666 None:intergenic
GGATTCACTTGATGATGAAG+AGG 0.574101 8_4:+51191539 Msa1331620:CDS
GGAGCTACAACACGCCTATG+AGG 0.575033 8_4:+51190723 Msa1331620:CDS
CGGTGGCTTCGGATTGAGAG+AGG 0.580013 8_4:-51190690 None:intergenic
ACGTAGAGCAAAGAAAGAGA+AGG 0.595059 8_4:+51192088 Msa1331620:CDS
CTATGAAAATAGTTTACGGA+TGG 0.596236 8_4:+51193361 Msa1331620:three_prime_UTR
GGGGTTGAGCCGAATGATGA+TGG 0.597019 8_4:+51191708 Msa1331620:CDS
ATAACATGCTTTCTGCCGGA+AGG 0.598055 8_4:-51193102 None:intergenic
TGAGGTACTCTCCGATCCAA+AGG 0.600261 8_4:+51190741 Msa1331620:CDS
AGGAAGAGAATAATAAGGTG+AGG 0.601773 8_4:+51191148 Msa1331620:CDS
ATCAAGTGAATCCTTGAACT+CGG 0.603284 8_4:-51191529 None:intergenic
AAGTGAGGAGGATGGCGTTG+GGG 0.606066 8_4:+51191623 Msa1331620:CDS
ATTTCAAATATATCATCGAG+TGG 0.606505 8_4:+51192995 Msa1331620:three_prime_UTR
CGGTAAAGAGAATGAGCAGG+TGG 0.606870 8_4:+51192244 Msa1331620:CDS
TTCATAAGGGTATGGATACA+GGG 0.609063 8_4:+51193136 Msa1331620:three_prime_UTR
CGAGGAAGGTGAAAGTGAAG+GGG 0.611247 8_4:+51191581 Msa1331620:CDS
TTAGACAGGCTCCTCTTATG+GGG 0.611836 8_4:+51190989 Msa1331620:CDS
TAATGATACTGTGAGAAAGT+TGG 0.612128 8_4:+51191191 Msa1331620:CDS
TGGCGGTAAAGAGAATGAGC+AGG 0.613961 8_4:+51192241 Msa1331620:CDS
GAAGCTGAAGTGGACGAGGA+AGG 0.614178 8_4:+51191567 Msa1331620:CDS
ATTGTTTATCGAAGCAACAA+TGG 0.617119 8_4:+51190540 Msa1331620:exon
CGTAGAGCAAAGAAAGAGAA+GGG 0.619612 8_4:+51192089 Msa1331620:CDS
TGTTGATGATGATGAAATTG+GGG 0.621284 8_4:+51191908 Msa1331620:CDS
GGCAGATGAGTATGATGCGA+TGG 0.625967 8_4:+51191092 Msa1331620:CDS
AGTAGTCGCATATCTGGACC+TGG 0.632829 8_4:-51193022 None:intergenic
GAGAATGAGAATGATGGGGT+TGG 0.635119 8_4:+51192026 Msa1331620:CDS
GTGAGCAGGAGTTTGAGTCA+AGG 0.636045 8_4:+51192790 Msa1331620:CDS
GAATGATGTTCTTGAAACAA+TGG 0.639988 8_4:+51191830 Msa1331620:CDS
ATTTGACGAGCTTGTCAGGG+TGG 0.643119 8_4:-51190663 None:intergenic
GATGGAGAAGAAGAAAGAGG+AGG 0.648465 8_4:+51191275 Msa1331620:CDS
AGAAGACGAGAGTGCAAATG+GGG 0.651811 8_4:+51191689 Msa1331620:CDS
TGTTATCTGACATACAGAGA+GGG 0.654486 8_4:-51193184 None:intergenic
TGCTGAGCATGCAGAAGATG+AGG 0.655174 8_4:+51191752 Msa1331620:CDS
AGAGCAAAGAAAGAGAAGGG+TGG 0.655964 8_4:+51192092 Msa1331620:CDS
ATCCATACCCTTATGAACTG+TGG 0.656114 8_4:-51193130 None:intergenic
TGCTTCAACACACAAGCCCG+AGG 0.660773 8_4:+51191974 Msa1331620:CDS
TAGCTCCTGAAACTGAGCGG+TGG 0.662261 8_4:-51190707 None:intergenic
CAGGTCCGAATAGGAAGTCG+CGG 0.662770 8_4:+51191115 Msa1331620:CDS
GAAGTCGCGGAGGTTGATGG+AGG 0.669800 8_4:+51191128 Msa1331620:CDS
AGATCAAAACTTTCAACCAG+AGG 0.672866 8_4:+51192335 Msa1331620:CDS
ACAATGGTATCTGGGCACAA+GGG 0.680825 8_4:+51191846 Msa1331620:CDS
TCTTCCGGTGAGCATTCGCG+AGG 0.687306 8_4:-51190604 None:intergenic
GGTAAAGAGAATGAGCAGGT+GGG 0.690040 8_4:+51192245 Msa1331620:CDS
GAGGAAAATGAGGATAATGG+CGG 0.690575 8_4:+51192224 Msa1331620:CDS
ATGTTATCTGACATACAGAG+AGG 0.696739 8_4:-51193185 None:intergenic
GAGTGAGAATGAGAATGATG+GGG 0.711594 8_4:+51192022 Msa1331620:CDS
GTCCGAATAGGAAGTCGCGG+AGG 0.733839 8_4:+51191118 Msa1331620:CDS
GTAGACCGAGAACTTCGTAG+TGG 0.735555 8_4:-51190582 None:intergenic
TTGTAGCTCCTGAAACTGAG+CGG 0.736164 8_4:-51190710 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTGATGAAATTAAA+AGG + chr8_4:51192537-51192556 Msa1331620:intron 10.0%
!!! ATTAATTTTGCTAAGAAATT+AGG + chr8_4:51190949-51190968 Msa1331620:CDS 15.0%
!! TATTCATAAAAACATACATT+TGG - chr8_4:51192368-51192387 None:intergenic 15.0%
!!! TATTTTTTTTCTTTCTTTCT+TGG + chr8_4:51192734-51192753 Msa1331620:intron 15.0%
!!! ATTAATAGCAACTATTTTTT+GGG - chr8_4:51193423-51193442 None:intergenic 15.0%
!!! TATTAATAGCAACTATTTTT+TGG - chr8_4:51193424-51193443 None:intergenic 15.0%
!!! AAAAAATAGTTGCTATTAAT+AGG + chr8_4:51193423-51193442 Msa1331620:three_prime_UTR 15.0%
!!! AAAAATAGTTGCTATTAATA+GGG + chr8_4:51193424-51193443 Msa1331620:three_prime_UTR 15.0%
!! AAAAAATTGGAAGTAAAACA+AGG - chr8_4:51192500-51192519 None:intergenic 20.0%
!! ACTTAGTAAAGCAAAAAAAT+TGG - chr8_4:51192513-51192532 None:intergenic 20.0%
!! CAGAATAATAAACAAGAAAA+TGG - chr8_4:51192589-51192608 None:intergenic 20.0%
!!! TTTTCTTGTTTATTATTCTG+TGG + chr8_4:51192589-51192608 Msa1331620:intron 20.0%
!!! CTTTGTTTTATTTTATTCTC+AGG + chr8_4:51192892-51192911 Msa1331620:intron 20.0%
!! CTGTAGTAAAAATTAAAGAA+TGG - chr8_4:51193059-51193078 None:intergenic 20.0%
!! TGTTTAGATATCTAATGTTA+TGG + chr8_4:51193240-51193259 Msa1331620:three_prime_UTR 20.0%
!! ATGTCTATGAAAATAGTTTA+CGG + chr8_4:51193357-51193376 Msa1331620:three_prime_UTR 20.0%
!!! AAAATCTGTAATAAGAGTAT+TGG + chr8_4:51193449-51193468 Msa1331620:three_prime_UTR 20.0%
! TGATGTGTTTGATAAAATTC+AGG + chr8_4:51190918-51190937 Msa1331620:CDS 25.0%
! TTTGCTAAGAAATTAGGTTT+AGG + chr8_4:51190955-51190974 Msa1331620:CDS 25.0%
! TTGCTAAGAAATTAGGTTTA+GGG + chr8_4:51190956-51190975 Msa1331620:CDS 25.0%
!! TTACGGCTTTTTATAGTTAT+TGG + chr8_4:51191037-51191056 Msa1331620:CDS 25.0%
!!! GCTTTTTATAGTTATTGGTT+GGG + chr8_4:51191042-51191061 Msa1331620:CDS 25.0%
!!! TTTGATTTTGATGAGAATGA+TGG + chr8_4:51191873-51191892 Msa1331620:CDS 25.0%
!!! ATGTTGATGATGATGAAATT+GGG + chr8_4:51191907-51191926 Msa1331620:CDS 25.0%
! GAGAAGAATGTAATCAATAT+TGG + chr8_4:51192158-51192177 Msa1331620:CDS 25.0%
! AATGTAATCAATATTGGAGA+TGG + chr8_4:51192164-51192183 Msa1331620:CDS 25.0%
! CAAAAACAGTATATTAGAAC+AGG - chr8_4:51192450-51192469 None:intergenic 25.0%
!! CTGTTCTAATATACTGTTTT+TGG + chr8_4:51192448-51192467 Msa1331620:intron 25.0%
!!! TTTTTTTGCTTTACTAAGTG+TGG + chr8_4:51192514-51192533 Msa1331620:intron 25.0%
!! TTTTTAAATTCACACATGTG+AGG + chr8_4:51192614-51192633 Msa1331620:intron 25.0%
! TCGATAAGGAAAATATACTA+AGG + chr8_4:51192965-51192984 Msa1331620:exon 25.0%
! ATTTCAAATATATCATCGAG+TGG + chr8_4:51192995-51193014 Msa1331620:three_prime_UTR 25.0%
!!! TCTAAACACATGTTTTGTTT+GGG - chr8_4:51193228-51193247 None:intergenic 25.0%
!!! ATCTAAACACATGTTTTGTT+TGG - chr8_4:51193229-51193248 None:intergenic 25.0%
GTTGCTTCGATAAACAATTA+GGG - chr8_4:51190538-51190557 None:intergenic 30.0%
! TGTTGCTTCGATAAACAATT+AGG - chr8_4:51190539-51190558 None:intergenic 30.0%
ATTGTTTATCGAAGCAACAA+TGG + chr8_4:51190540-51190559 Msa1331620:exon 30.0%
GTTAGACTTTGAATTTGGAT+CGG - chr8_4:51190809-51190828 None:intergenic 30.0%
TATTCGAGAAAAACGAAAAC+AGG - chr8_4:51190846-51190865 None:intergenic 30.0%
! TTTCTCGAATACCGTATTTT+CGG + chr8_4:51190855-51190874 Msa1331620:CDS 30.0%
! GGCTTTTTATAGTTATTGGT+TGG + chr8_4:51191041-51191060 Msa1331620:CDS 30.0%
! GACTGTTATGGATTTTTGTT+GGG + chr8_4:51191071-51191090 Msa1331620:CDS 30.0%
TAATGATACTGTGAGAAAGT+TGG + chr8_4:51191191-51191210 Msa1331620:CDS 30.0%
TAAGAGAGTGATTGATATGA+AGG + chr8_4:51191236-51191255 Msa1331620:CDS 30.0%
TATGAAGGTGAAGAAGAATT+TGG + chr8_4:51191251-51191270 Msa1331620:CDS 30.0%
!!! AGTTTTATTGTGTGTTGTGT+GGG + chr8_4:51191439-51191458 Msa1331620:CDS 30.0%
GAATGATGTTCTTGAAACAA+TGG + chr8_4:51191830-51191849 Msa1331620:CDS 30.0%
TTCTTGAAACAATGGTATCT+GGG + chr8_4:51191838-51191857 Msa1331620:CDS 30.0%
CATTCTCATCAAAATCAAAC+CGG - chr8_4:51191872-51191891 None:intergenic 30.0%
!! GATGTTGATGATGATGAAAT+TGG + chr8_4:51191906-51191925 Msa1331620:CDS 30.0%
!! TGTTGATGATGATGAAATTG+GGG + chr8_4:51191908-51191927 Msa1331620:CDS 30.0%
!!! GTTTCTTTTTTGCAGGTTTT+TGG - chr8_4:51192070-51192089 None:intergenic 30.0%
TTCTCATATTTGCCATTAGT+AGG - chr8_4:51192143-51192162 None:intergenic 30.0%
! CTCATTTTCCTCGAAATATT+GGG - chr8_4:51192216-51192235 None:intergenic 30.0%
GAAGAAGATTTCAAATCAAC+CGG + chr8_4:51192277-51192296 Msa1331620:CDS 30.0%
!! AATCAACCGGTTGATAAAAA+AGG + chr8_4:51192290-51192309 Msa1331620:CDS 30.0%
!!! GAAGTTCCTTTTTTATCAAC+CGG - chr8_4:51192299-51192318 None:intergenic 30.0%
! TTCTTGGATTAGAGAAATCT+TGG + chr8_4:51192750-51192769 Msa1331620:intron 30.0%
TTGAAATTTGATGAGCAAGA+GGG - chr8_4:51192826-51192845 None:intergenic 30.0%
TCATCATTGTTTATGTTGTG+AGG + chr8_4:51192853-51192872 Msa1331620:intron 30.0%
! ATATGCGACTACTTCAATTT+TGG + chr8_4:51193032-51193051 Msa1331620:three_prime_UTR 30.0%
ATAAATAACATGCTTTCTGC+CGG - chr8_4:51193109-51193128 None:intergenic 30.0%
TATTTATGCCACAGTTCATA+AGG + chr8_4:51193122-51193141 Msa1331620:three_prime_UTR 30.0%
ATTTATGCCACAGTTCATAA+GGG + chr8_4:51193123-51193142 Msa1331620:three_prime_UTR 30.0%
AAAATAGAATGAACTCCATC+TGG - chr8_4:51193293-51193312 None:intergenic 30.0%
! ATGGAGTTCATTCTATTTTC+TGG + chr8_4:51193294-51193313 Msa1331620:three_prime_UTR 30.0%
! TTCTGGAAACAATAGTGAAA+TGG + chr8_4:51193311-51193330 Msa1331620:three_prime_UTR 30.0%
CTATGAAAATAGTTTACGGA+TGG + chr8_4:51193361-51193380 Msa1331620:three_prime_UTR 30.0%
! TTTTTCTCAAAGTTACCCTG+AGG - chr8_4:51190492-51190511 None:intergenic 35.0%
ACGGAGTTAGACTTTGAATT+TGG - chr8_4:51190814-51190833 None:intergenic 35.0%
AGAAAAACGAAAACAGGTCA+GGG - chr8_4:51190840-51190859 None:intergenic 35.0%
! TTCTCGAATACCGTATTTTC+GGG + chr8_4:51190856-51190875 Msa1331620:CDS 35.0%
AACCTTATAGAAACCCTTAC+CGG - chr8_4:51190893-51190912 None:intergenic 35.0%
! CGACTGTTATGGATTTTTGT+TGG + chr8_4:51191070-51191089 Msa1331620:CDS 35.0%
GATGGAGGAAGAGAATAATA+AGG + chr8_4:51191143-51191162 Msa1331620:CDS 35.0%
AGGAAGAGAATAATAAGGTG+AGG + chr8_4:51191148-51191167 Msa1331620:CDS 35.0%
AAGAGAATAATAAGGTGAGG+AGG + chr8_4:51191151-51191170 Msa1331620:CDS 35.0%
AGAAGTTGAGGATTTGTATG+AGG + chr8_4:51191386-51191405 Msa1331620:CDS 35.0%
GTTTGAGAAGAAAGATGAGA+AGG + chr8_4:51191416-51191435 Msa1331620:CDS 35.0%
!!! GAGTTTTATTGTGTGTTGTG+TGG + chr8_4:51191438-51191457 Msa1331620:CDS 35.0%
AGTTTAAGAGTGAGAAGCAA+TGG + chr8_4:51191466-51191485 Msa1331620:CDS 35.0%
ATCAAGTGAATCCTTGAACT+CGG - chr8_4:51191532-51191551 None:intergenic 35.0%
TCATTGTCACCATCATCATT+CGG - chr8_4:51191720-51191739 None:intergenic 35.0%
GTTCTTGAAACAATGGTATC+TGG + chr8_4:51191837-51191856 Msa1331620:CDS 35.0%
TTCTCACTCTCAATTTGAGT+TGG - chr8_4:51192011-51192030 None:intergenic 35.0%
AGAGTGAGAATGAGAATGAT+GGG + chr8_4:51192021-51192040 Msa1331620:CDS 35.0%
GAAACTAATGTGCCTACTAA+TGG + chr8_4:51192128-51192147 Msa1331620:CDS 35.0%
! CCTCATTTTCCTCGAAATAT+TGG - chr8_4:51192217-51192236 None:intergenic 35.0%
CCAATATTTCGAGGAAAATG+AGG + chr8_4:51192214-51192233 Msa1331620:CDS 35.0%
TTCGAGGAAAATGAGGATAA+TGG + chr8_4:51192221-51192240 Msa1331620:CDS 35.0%
!! CTGGTTGAAAGTTTTGATCT+GGG - chr8_4:51192335-51192354 None:intergenic 35.0%
!! TCTGGTTGAAAGTTTTGATC+TGG - chr8_4:51192336-51192355 None:intergenic 35.0%
AGATCAAAACTTTCAACCAG+AGG + chr8_4:51192335-51192354 Msa1331620:CDS 35.0%
!!! TACATTTGGTTTTCTTCCTC+TGG - chr8_4:51192354-51192373 None:intergenic 35.0%
CATACATATCTCAGTAGTCA+TGG - chr8_4:51192419-51192438 None:intergenic 35.0%
AGATATAACCAACGTTATCC+TGG - chr8_4:51192647-51192666 None:intergenic 35.0%
CTTCTGTTTAATGGAAGACA+TGG - chr8_4:51192690-51192709 None:intergenic 35.0%
GAAATCAGAATAGAGCAGAA+AGG - chr8_4:51192713-51192732 None:intergenic 35.0%
CTTGAAATTTGATGAGCAAG+AGG - chr8_4:51192827-51192846 None:intergenic 35.0%
AATTGAAGTAGTCGCATATC+TGG - chr8_4:51193031-51193050 None:intergenic 35.0%
! TTCATAAGGGTATGGATACA+GGG + chr8_4:51193136-51193155 Msa1331620:three_prime_UTR 35.0%
GGGTGAGATCTATTGAAATT+CGG - chr8_4:51193167-51193186 None:intergenic 35.0%
TGTTATCTGACATACAGAGA+GGG - chr8_4:51193187-51193206 None:intergenic 35.0%
ATGTTATCTGACATACAGAG+AGG - chr8_4:51193188-51193207 None:intergenic 35.0%
AAATAGTTTACGGATGGCAA+TGG + chr8_4:51193367-51193386 Msa1331620:three_prime_UTR 35.0%
!! TGTAATAAGAGTATTGGTGC+TGG + chr8_4:51193455-51193474 Msa1331620:three_prime_UTR 35.0%
GAAGAGGATTTGAGAACGAT+GGG - chr8_4:51190785-51190804 None:intergenic 40.0%
AGAAGAGGATTTGAGAACGA+TGG - chr8_4:51190786-51190805 None:intergenic 40.0%
TTGAATTTGGATCGGAGAAG+AGG - chr8_4:51190801-51190820 None:intergenic 40.0%
GAGAAAAACGAAAACAGGTC+AGG - chr8_4:51190841-51190860 None:intergenic 40.0%
! TCTCGAATACCGTATTTTCG+GGG + chr8_4:51190857-51190876 Msa1331620:CDS 40.0%
!! TACCGTATTTTCGGGGTTTT+CGG + chr8_4:51190864-51190883 Msa1331620:CDS 40.0%
ATCCGAAAACCCCGAAAATA+CGG - chr8_4:51190869-51190888 None:intergenic 40.0%
TTCCGGTAAGGGTTTCTATA+AGG + chr8_4:51190888-51190907 Msa1331620:CDS 40.0%
! AGGGATTGATTCTGTTAGAC+AGG + chr8_4:51190975-51190994 Msa1331620:CDS 40.0%
CTATCCAAATTCCCCATAAG+AGG - chr8_4:51191003-51191022 None:intergenic 40.0%
! GTTGGGATTTTCGACTGTTA+TGG + chr8_4:51191059-51191078 Msa1331620:CDS 40.0%
GAATAATAAGGTGAGGAGGA+AGG + chr8_4:51191155-51191174 Msa1331620:CDS 40.0%
!! TGGCTGATTTTGTGAAGAAG+AGG + chr8_4:51191211-51191230 Msa1331620:CDS 40.0%
!! GGCTGATTTTGTGAAGAAGA+GGG + chr8_4:51191212-51191231 Msa1331620:CDS 40.0%
GGTGAAGAAGAATTTGGAGA+TGG + chr8_4:51191257-51191276 Msa1331620:CDS 40.0%
!! GGTTGATGAAGAAGAAGTTG+AGG + chr8_4:51191374-51191393 Msa1331620:CDS 40.0%
! TGAGCAGAGTAAGAAGCATA+AGG + chr8_4:51191497-51191516 Msa1331620:CDS 40.0%
!! GGATTCACTTGATGATGAAG+AGG + chr8_4:51191539-51191558 Msa1331620:CDS 40.0%
AGAGGAGAGATTAGAAAGTG+AGG + chr8_4:51191608-51191627 Msa1331620:CDS 40.0%
AGATTAGAAAGTGAGGAGGA+TGG + chr8_4:51191615-51191634 Msa1331620:CDS 40.0%
GAGAGTGAGAATGAGAATGA+TGG + chr8_4:51192020-51192039 Msa1331620:CDS 40.0%
GAGTGAGAATGAGAATGATG+GGG + chr8_4:51192022-51192041 Msa1331620:CDS 40.0%
!!! GCTCTACGTTTCTTTTTTGC+AGG - chr8_4:51192077-51192096 None:intergenic 40.0%
ACGTAGAGCAAAGAAAGAGA+AGG + chr8_4:51192088-51192107 Msa1331620:CDS 40.0%
CGTAGAGCAAAGAAAGAGAA+GGG + chr8_4:51192089-51192108 Msa1331620:CDS 40.0%
AAAGAGAAGGGTGGGAAAAA+TGG + chr8_4:51192101-51192120 Msa1331620:CDS 40.0%
AAGAGAAGGGTGGGAAAAAT+GGG + chr8_4:51192102-51192121 Msa1331620:CDS 40.0%
! GTCTAGTTCCCAATATTTCG+AGG + chr8_4:51192205-51192224 Msa1331620:CDS 40.0%
! GAGGAAAATGAGGATAATGG+CGG + chr8_4:51192224-51192243 Msa1331620:CDS 40.0%
GCAGAAAGGCTTCTGTTTAA+TGG - chr8_4:51192699-51192718 None:intergenic 40.0%
AAATTTGATGAGCAAGAGGG+AGG - chr8_4:51192823-51192842 None:intergenic 40.0%
GCAGCAATGAAAAGTCGATA+AGG + chr8_4:51192951-51192970 Msa1331620:CDS 40.0%
! ATATCATCGAGTGGTTTTCC+AGG + chr8_4:51193004-51193023 Msa1331620:three_prime_UTR 40.0%
TAAATTGTAGCTCAGCCTTC+CGG + chr8_4:51193087-51193106 Msa1331620:three_prime_UTR 40.0%
ATCCATACCCTTATGAACTG+TGG - chr8_4:51193133-51193152 None:intergenic 40.0%
! GTTCATAAGGGTATGGATAC+AGG + chr8_4:51193135-51193154 Msa1331620:three_prime_UTR 40.0%
!!! GTTTTTCTAGAGTGACCAGA+TGG + chr8_4:51193275-51193294 Msa1331620:three_prime_UTR 40.0%
AATGGAATCTTAGCAAGCAC+AGG + chr8_4:51193329-51193348 Msa1331620:three_prime_UTR 40.0%
GCAATGGAATCGAGATCTAT+CGG + chr8_4:51193383-51193402 Msa1331620:three_prime_UTR 40.0%
CAATGGAATCGAGATCTATC+GGG + chr8_4:51193384-51193403 Msa1331620:three_prime_UTR 40.0%
TAAGCTGATCGGAGTTCTTC+CGG - chr8_4:51190622-51190641 None:intergenic 45.0%
AAGAACTCCGATCAGCTTAC+CGG + chr8_4:51190623-51190642 Msa1331620:CDS 45.0%
! CTGATTTGACGAGCTTGTCA+GGG - chr8_4:51190669-51190688 None:intergenic 45.0%
TTGTAGCTCCTGAAACTGAG+CGG - chr8_4:51190713-51190732 None:intergenic 45.0%
!! TTTTCGGGGTTTTCGGATTC+CGG + chr8_4:51190871-51190890 Msa1331620:CDS 45.0%
TGTTAGACAGGCTCCTCTTA+TGG + chr8_4:51190987-51191006 Msa1331620:CDS 45.0%
GTTAGACAGGCTCCTCTTAT+GGG + chr8_4:51190988-51191007 Msa1331620:CDS 45.0%
TTAGACAGGCTCCTCTTATG+GGG + chr8_4:51190989-51191008 Msa1331620:CDS 45.0%
TTTGGATAGTCCTTATGCGC+AGG + chr8_4:51191014-51191033 Msa1331620:CDS 45.0%
TAGTCCTTATGCGCAGGTTA+CGG + chr8_4:51191020-51191039 Msa1331620:CDS 45.0%
GGAGATGGAGAAGAAGAAAG+AGG + chr8_4:51191272-51191291 Msa1331620:CDS 45.0%
GATGGAGAAGAAGAAAGAGG+AGG + chr8_4:51191275-51191294 Msa1331620:CDS 45.0%
GAAGAAGAAAGAGGAGGAGA+AGG + chr8_4:51191281-51191300 Msa1331620:CDS 45.0%
TCATCAACCTTAGCCCAATC+AGG - chr8_4:51191363-51191382 None:intergenic 45.0%
AGAGGAGTTAGAAGCTGAAG+TGG + chr8_4:51191557-51191576 Msa1331620:CDS 45.0%
ACGAGGAAGGTGAAAGTGAA+GGG + chr8_4:51191580-51191599 Msa1331620:CDS 45.0%
GGAGAGATTAGAAAGTGAGG+AGG + chr8_4:51191611-51191630 Msa1331620:CDS 45.0%
! CAGAAGACGAGAGTGCAAAT+GGG + chr8_4:51191688-51191707 Msa1331620:CDS 45.0%
! AGAAGACGAGAGTGCAAATG+GGG + chr8_4:51191689-51191708 Msa1331620:CDS 45.0%
AACAATGGTATCTGGGCACA+AGG + chr8_4:51191845-51191864 Msa1331620:CDS 45.0%
ACAATGGTATCTGGGCACAA+GGG + chr8_4:51191846-51191865 Msa1331620:CDS 45.0%
AGTTGGAGTTTCAGAAGCCT+CGG - chr8_4:51191994-51192013 None:intergenic 45.0%
! GAGAATGAGAATGATGGGGT+TGG + chr8_4:51192026-51192045 Msa1331620:CDS 45.0%
AGAGCAAAGAAAGAGAAGGG+TGG + chr8_4:51192092-51192111 Msa1331620:CDS 45.0%
GAGCAAAGAAAGAGAAGGGT+GGG + chr8_4:51192093-51192112 Msa1331620:CDS 45.0%
AGAGAAGGGTGGGAAAAATG+GGG + chr8_4:51192103-51192122 Msa1331620:CDS 45.0%
GGTAAAGAGAATGAGCAGGT+GGG + chr8_4:51192245-51192264 Msa1331620:CDS 45.0%
GCACAATACAGGAACAGAAC+AGG - chr8_4:51192397-51192416 None:intergenic 45.0%
CAGTAGTCATGGCACAATAC+AGG - chr8_4:51192408-51192427 None:intergenic 45.0%
! TTTTTGCGAGACATGTGAGC+AGG + chr8_4:51192776-51192795 Msa1331620:CDS 45.0%
CATAAACATCTGAGCGACTC+TGG + chr8_4:51192924-51192943 Msa1331620:CDS 45.0%
ATAACATGCTTTCTGCCGGA+AGG - chr8_4:51193105-51193124 None:intergenic 45.0%
TGCCACAGTTCATAAGGGTA+TGG + chr8_4:51193128-51193147 Msa1331620:three_prime_UTR 45.0%
TTCTGTCGTCGTCAACCTCA+GGG + chr8_4:51190474-51190493 Msa1331620:five_prime_UTR 50.0%
! CGAAGCAACAATGGCATCGA+CGG + chr8_4:51190549-51190568 Msa1331620:exon 50.0%
CGATGCCACTACGAAGTTCT+CGG + chr8_4:51190577-51190596 Msa1331620:CDS 50.0%
GTAGACCGAGAACTTCGTAG+TGG - chr8_4:51190585-51190604 None:intergenic 50.0%
CGAGTTTCCGGTAAGCTGAT+CGG - chr8_4:51190633-51190652 None:intergenic 50.0%
ATTTGACGAGCTTGTCAGGG+TGG - chr8_4:51190666-51190685 None:intergenic 50.0%
! CCTGATTTGACGAGCTTGTC+AGG - chr8_4:51190670-51190689 None:intergenic 50.0%
CCTGACAAGCTCGTCAAATC+AGG + chr8_4:51190667-51190686 Msa1331620:CDS 50.0%
!! TGGATCGGAGAGTACCTCAT+AGG - chr8_4:51190740-51190759 None:intergenic 50.0%
! TGAGGTACTCTCCGATCCAA+AGG + chr8_4:51190741-51190760 Msa1331620:CDS 50.0%
CCAAGCTCGTTCCTTTGGAT+CGG - chr8_4:51190755-51190774 None:intergenic 50.0%
TCGTACCAAGCTCGTTCCTT+TGG - chr8_4:51190760-51190779 None:intergenic 50.0%
CGAAAACAGGTCAGGGACAA+CGG - chr8_4:51190833-51190852 None:intergenic 50.0%
! GGGTTTTCGGATTCCGGTAA+GGG + chr8_4:51190877-51190896 Msa1331620:CDS 50.0%
GGCTCCTCTTATGGGGAATT+TGG + chr8_4:51190996-51191015 Msa1331620:CDS 50.0%
AAAGCCGTAACCTGCGCATA+AGG - chr8_4:51191027-51191046 None:intergenic 50.0%
GGCAGATGAGTATGATGCGA+TGG + chr8_4:51191092-51191111 Msa1331620:CDS 50.0%
GATGAGTATGATGCGATGGC+AGG + chr8_4:51191096-51191115 Msa1331620:CDS 50.0%
AACCTCCGCGACTTCCTATT+CGG - chr8_4:51191123-51191142 None:intergenic 50.0%
AGAAAGAGGAGGAGAAGGAG+AGG + chr8_4:51191286-51191305 Msa1331620:CDS 50.0%
GAAGGAGAGGAAGAGGAAGT+TGG + chr8_4:51191299-51191318 Msa1331620:CDS 50.0%
GAGGAAGAGGAAGTTGGAGA+TGG + chr8_4:51191305-51191324 Msa1331620:CDS 50.0%
AGAGGAAGTTGGAGATGGAG+AGG + chr8_4:51191310-51191329 Msa1331620:CDS 50.0%
GAAGTTGGAGATGGAGAGGA+AGG + chr8_4:51191314-51191333 Msa1331620:CDS 50.0%
TGGCTTATGAGGAGCCTGAT+TGG + chr8_4:51191346-51191365 Msa1331620:CDS 50.0%
GGCTTATGAGGAGCCTGATT+GGG + chr8_4:51191347-51191366 Msa1331620:CDS 50.0%
GGAGAAAGTTGCCGAGTTCA+AGG + chr8_4:51191518-51191537 Msa1331620:CDS 50.0%
GTTAGAAGCTGAAGTGGACG+AGG + chr8_4:51191563-51191582 Msa1331620:CDS 50.0%
GACGAGGAAGGTGAAAGTGA+AGG + chr8_4:51191579-51191598 Msa1331620:CDS 50.0%
CGAGGAAGGTGAAAGTGAAG+GGG + chr8_4:51191581-51191600 Msa1331620:CDS 50.0%
GAAGGTGAAAGTGAAGGGGT+TGG + chr8_4:51191585-51191604 Msa1331620:CDS 50.0%
TGAAAGTGAAGGGGTTGGAG+AGG + chr8_4:51191590-51191609 Msa1331620:CDS 50.0%
AAAGTGAGGAGGATGGCGTT+GGG + chr8_4:51191622-51191641 Msa1331620:CDS 50.0%
!! TGGCGTTGGGGTTGATGATT+TGG + chr8_4:51191635-51191654 Msa1331620:CDS 50.0%
! GCAGAAGACGAGAGTGCAAA+TGG + chr8_4:51191687-51191706 Msa1331620:CDS 50.0%
TGCTGAGCATGCAGAAGATG+AGG + chr8_4:51191752-51191771 Msa1331620:CDS 50.0%
TGGGGTTCTTGAAGCAATGC+TGG + chr8_4:51191926-51191945 Msa1331620:CDS 50.0%
GTTCTTGAAGCAATGCTGGC+TGG + chr8_4:51191930-51191949 Msa1331620:CDS 50.0%
! GGCTTGTGTGTTGAAGCACT+GGG - chr8_4:51191972-51191991 None:intergenic 50.0%
GTTGGAGTTTCAGAAGCCTC+GGG - chr8_4:51191993-51192012 None:intergenic 50.0%
!! GAATGATGGGGTTGGTGCTA+TGG + chr8_4:51192034-51192053 Msa1331620:CDS 50.0%
TGGCGGTAAAGAGAATGAGC+AGG + chr8_4:51192241-51192260 Msa1331620:CDS 50.0%
CGGTAAAGAGAATGAGCAGG+TGG + chr8_4:51192244-51192263 Msa1331620:CDS 50.0%
GCATGTAGCCAGGATAACGT+TGG + chr8_4:51192636-51192655 Msa1331620:intron 50.0%
GTGAGCAGGAGTTTGAGTCA+AGG + chr8_4:51192790-51192809 Msa1331620:CDS 50.0%
AGTAGTCGCATATCTGGACC+TGG - chr8_4:51193025-51193044 None:intergenic 50.0%
CTTCTGTCGTCGTCAACCTC+AGG + chr8_4:51190473-51190492 Msa1331620:five_prime_UTR 55.0%
TCTACCTCGCGAATGCTCAC+CGG + chr8_4:51190600-51190619 Msa1331620:CDS 55.0%
CTGAAACTGAGCGGTGGCTT+CGG - chr8_4:51190704-51190723 None:intergenic 55.0%
TAGCTCCTGAAACTGAGCGG+TGG - chr8_4:51190710-51190729 None:intergenic 55.0%
GGAGCTACAACACGCCTATG+AGG + chr8_4:51190723-51190742 Msa1331620:CDS 55.0%
CCGATCCAAAGGAACGAGCT+TGG + chr8_4:51190752-51190771 Msa1331620:CDS 55.0%
! GGGGTTTTCGGATTCCGGTA+AGG + chr8_4:51190876-51190895 Msa1331620:CDS 55.0%
ATGCGATGGCAGGTCCGAAT+AGG + chr8_4:51191106-51191125 Msa1331620:CDS 55.0%
CAGGTCCGAATAGGAAGTCG+CGG + chr8_4:51191115-51191134 Msa1331620:CDS 55.0%
TAGGAAGTCGCGGAGGTTGA+TGG + chr8_4:51191125-51191144 Msa1331620:CDS 55.0%
AGGAGGAGAAGGAGAGGAAG+AGG + chr8_4:51191292-51191311 Msa1331620:CDS 55.0%
TGGAGATGGAGAGGAAGGAG+AGG + chr8_4:51191319-51191338 Msa1331620:CDS 55.0%
GGAGATGGAGAGGAAGGAGA+GGG + chr8_4:51191320-51191339 Msa1331620:CDS 55.0%
GGAGAGGGCTATGGCTTATG+AGG + chr8_4:51191335-51191354 Msa1331620:CDS 55.0%
TGAGGAGCCTGATTGGGCTA+AGG + chr8_4:51191353-51191372 Msa1331620:CDS 55.0%
GAAGCTGAAGTGGACGAGGA+AGG + chr8_4:51191567-51191586 Msa1331620:CDS 55.0%
GAAAGTGAGGAGGATGGCGT+TGG + chr8_4:51191621-51191640 Msa1331620:CDS 55.0%
AAGTGAGGAGGATGGCGTTG+GGG + chr8_4:51191623-51191642 Msa1331620:CDS 55.0%
GGGGTTGAGCCGAATGATGA+TGG + chr8_4:51191708-51191727 Msa1331620:CDS 55.0%
GGGCTTGTGTGTTGAAGCAC+TGG - chr8_4:51191973-51191992 None:intergenic 55.0%
TGCTTCAACACACAAGCCCG+AGG + chr8_4:51191974-51191993 Msa1331620:CDS 55.0%
CACATGTGAGGCATGTAGCC+AGG + chr8_4:51192626-51192645 Msa1331620:intron 55.0%
TCTTCCGGTGAGCATTCGCG+AGG - chr8_4:51190607-51190626 None:intergenic 60.0%
! GGCGTTGGAGAGCGAGTTTC+CGG - chr8_4:51190645-51190664 None:intergenic 60.0%
CGGTGGCTTCGGATTGAGAG+AGG - chr8_4:51190693-51190712 None:intergenic 60.0%
CGAAGCCACCGCTCAGTTTC+AGG + chr8_4:51190702-51190721 Msa1331620:CDS 60.0%
GTCCGAATAGGAAGTCGCGG+AGG + chr8_4:51191118-51191137 Msa1331620:CDS 60.0%
!! GAAGTCGCGGAGGTTGATGG+AGG + chr8_4:51191128-51191147 Msa1331620:CDS 60.0%
AGGTGAGGAGGAAGGCGAAG+AGG + chr8_4:51191163-51191182 Msa1331620:CDS 60.0%
GGTGAGGAGGAAGGCGAAGA+GGG + chr8_4:51191164-51191183 Msa1331620:CDS 60.0%
GGAGAGGAAGGAGAGGGCTA+TGG + chr8_4:51191326-51191345 Msa1331620:CDS 60.0%
TGGTATCTGGGCACAAGGGC+CGG + chr8_4:51191850-51191869 Msa1331620:CDS 60.0%
CGAGCTTGTCAGGGTGGCGT+TGG - chr8_4:51190660-51190679 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51190468 51193523 51190468 ID=Msa1331620;Name=Msa1331620
chr8_4 mRNA 51190468 51193523 51190468 ID=Msa1331620-mRNA-1;Parent=Msa1331620;Name=Msa1331620-mRNA-1;_AED=0.07;_eAED=0.07;_QI=91|1|1|1|1|1|3|552|639
chr8_4 exon 51190468 51192370 51190468 ID=Msa1331620-mRNA-1:exon:15101;Parent=Msa1331620-mRNA-1
chr8_4 exon 51192762 51192811 51192762 ID=Msa1331620-mRNA-1:exon:15102;Parent=Msa1331620-mRNA-1
chr8_4 exon 51192914 51193523 51192914 ID=Msa1331620-mRNA-1:exon:15103;Parent=Msa1331620-mRNA-1
chr8_4 five_prime_UTR 51190468 51190558 51190468 ID=Msa1331620-mRNA-1:five_prime_utr;Parent=Msa1331620-mRNA-1
chr8_4 CDS 51190559 51192370 51190559 ID=Msa1331620-mRNA-1:cds;Parent=Msa1331620-mRNA-1
chr8_4 CDS 51192762 51192811 51192762 ID=Msa1331620-mRNA-1:cds;Parent=Msa1331620-mRNA-1
chr8_4 CDS 51192914 51192971 51192914 ID=Msa1331620-mRNA-1:cds;Parent=Msa1331620-mRNA-1
chr8_4 three_prime_UTR 51192972 51193523 51192972 ID=Msa1331620-mRNA-1:three_prime_utr;Parent=Msa1331620-mRNA-1
Gene Sequence

>Msa1331620

ATGGCATCGACGGCGAAGCGATGCCACTACGAAGTTCTCGGTCTACCTCGCGAATGCTCACCGGAAGAACTCCGATCAGCTTACCGGAAACTCGCTCTCCAACGCCACCCTGACAAGCTCGTCAAATCAGGCCTCTCTCAATCCGAAGCCACCGCTCAGTTTCAGGAGCTACAACACGCCTATGAGGTACTCTCCGATCCAAAGGAACGAGCTTGGTACGATTCCCATCGTTCTCAAATCCTCTTCTCCGATCCAAATTCAAAGTCTAACTCCGTTGTCCCTGACCTGTTTTCGTTTTTCTCGAATACCGTATTTTCGGGGTTTTCGGATTCCGGTAAGGGTTTCTATAAGGTTTATTCTGATGTGTTTGATAAAATTCAGGCGAATGAGATTAATTTTGCTAAGAAATTAGGTTTAGGGATTGATTCTGTTAGACAGGCTCCTCTTATGGGGAATTTGGATAGTCCTTATGCGCAGGTTACGGCTTTTTATAGTTATTGGTTGGGATTTTCGACTGTTATGGATTTTTGTTGGGCAGATGAGTATGATGCGATGGCAGGTCCGAATAGGAAGTCGCGGAGGTTGATGGAGGAAGAGAATAATAAGGTGAGGAGGAAGGCGAAGAGGGAGTATAATGATACTGTGAGAAAGTTGGCTGATTTTGTGAAGAAGAGGGATAAGAGAGTGATTGATATGAAGGTGAAGAAGAATTTGGAGATGGAGAAGAAGAAAGAGGAGGAGAAGGAGAGGAAGAGGAAGTTGGAGATGGAGAGGAAGGAGAGGGCTATGGCTTATGAGGAGCCTGATTGGGCTAAGGTTGATGAAGAAGAAGTTGAGGATTTGTATGAGGATGATGAGTTTGAGAAGAAAGATGAGAAGGAGTTTTATTGTGTGTTGTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGCAGAGTAAGAAGCATAAGGAGAAAGTTGCCGAGTTCAAGGATTCACTTGATGATGAAGAGGAGTTAGAAGCTGAAGTGGACGAGGAAGGTGAAAGTGAAGGGGTTGGAGAGGAGAGATTAGAAAGTGAGGAGGATGGCGTTGGGGTTGATGATTTGGAAGAGAGAATTCAAGACAGTCTTAATGTTGCAGAAGACGAGAGTGCAAATGGGGTTGAGCCGAATGATGATGGTGACAATGATGAATTTTTTGATGCTGAGCATGCAGAAGATGAGGAGATTGATGCGTCAGTTGATTTTGTTGTTAATGACGACGACGACGACGATGATGAGAATGATGTTCTTGAAACAATGGTATCTGGGCACAAGGGCCGGTTTGATTTTGATGAGAATGATGGCAACGATGATGATGTTGATGATGATGAAATTGGGGTTCTTGAAGCAATGCTGGCTGGACGTAAGAGCAGAAAACCCAGTGCTTCAACACACAAGCCCGAGGCTTCTGAAACTCCAACTCAAATTGAGAGTGAGAATGAGAATGATGGGGTTGGTGCTATGGAATATAACAACCAAAAACCTGCAAAAAAGAAACGTAGAGCAAAGAAAGAGAAGGGTGGGAAAAATGGGGATGAAACTAATGTGCCTACTAATGGCAAATATGAGAAGAATGTAATCAATATTGGAGATGGCGATTCTTATGCACAAGAGTCTAGTTCCCAATATTTCGAGGAAAATGAGGATAATGGCGGTAAAGAGAATGAGCAGGTGGGTAGAGATAAGAAGAAGATTTCAAATCAACCGGTTGATAAAAAAGGAACTTCAAAGAACACAAAACCCAGATCAAAACTTTCAACCAGAGGAAGAAAACCAAATAGAAATCTTGGTCATTTTTGCGAGACATGTGAGCAGGAGTTTGAGTCAAGGAATAAGTTACATAAACATCTGAGCGACTCTGGACATGCAGCAATGAAAAGTCGATAA
Protein sequence

>Msa1331620

MASTAKRCHYEVLGLPRECSPEELRSAYRKLALQRHPDKLVKSGLSQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSKSNSVVPDLFSFFSNTVFSGFSDSGKGFYKVYSDVFDKIQANEINFAKKLGLGIDSVRQAPLMGNLDSPYAQVTAFYSYWLGFSTVMDFCWADEYDAMAGPNRKSRRLMEEENNKVRRKAKREYNDTVRKLADFVKKRDKRVIDMKVKKNLEMEKKKEEEKERKRKLEMERKERAMAYEEPDWAKVDEEEVEDLYEDDEFEKKDEKEFYCVLCGKKFKSEKQWKNHEQSKKHKEKVAEFKDSLDDEEELEAEVDEEGESEGVGEERLESEEDGVGVDDLEERIQDSLNVAEDESANGVEPNDDGDNDEFFDAEHAEDEEIDASVDFVVNDDDDDDDENDVLETMVSGHKGRFDFDENDGNDDDVDDDEIGVLEAMLAGRKSRKPSASTHKPEASETPTQIESENENDGVGAMEYNNQKPAKKKRRAKKEKGGKNGDETNVPTNGKYEKNVINIGDGDSYAQESSSQYFEENEDNGGKENEQVGRDKKKISNQPVDKKGTSKNTKPRSKLSTRGRKPNRNLGHFCETCEQEFESRNKLHKHLSDSGHAAMKSR*