AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0038000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038000 MtrunA17_Chr1g0202021 95.918 784 7 3 1 759 558 1341 0.0 1535
Msa0038000 MtrunA17_Chr1g0201991 85.848 643 69 2 139 759 184 826 0.0 1125
Msa0038000 MtrunA17_Chr4g0000221 66.237 465 115 10 153 606 2 435 0.0 568
Msa0038000 MtrunA17_Chr4g0000991 61.916 428 107 7 120 541 19 396 1.09e-175 509
Msa0038000 MtrunA17_Chr7g0264901 57.396 338 134 2 179 510 25 358 2.60e-125 380
Msa0038000 MtrunA17_Chr4g0004141 62.348 247 55 4 498 738 216 430 4.93e-86 279
Msa0038000 MtrunA17_Chr4g0004141 53.304 227 72 5 190 413 13 208 2.80e-68 231
Msa0038000 MtrunA17_Chr7g0264471 48.669 263 124 3 186 446 51 304 4.98e-78 255
Msa0038000 MtrunA17_Chr7g0263861 62.025 158 57 1 518 675 119 273 5.72e-56 192
Msa0038000 MtrunA17_Chr2g0312621 27.273 484 267 15 190 645 495 921 7.94e-27 117
Msa0038000 MtrunA17_Chr5g0412261 26.032 557 309 20 190 716 200 683 8.89e-23 103
Msa0038000 MtrunA17_Chr4g0038951 85.714 49 6 1 421 469 33 80 4.12e-19 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0038000 AT1G76810.1 69.693 815 177 16 1 759 494 1294 0.0 1063
Msa0038000 AT1G76720.1 67.848 762 193 16 1 738 437 1170 0.0 960
Msa0038000 AT1G76720.2 67.979 762 192 16 1 738 470 1203 0.0 959
Msa0038000 AT1G21160.1 59.577 804 270 13 1 759 299 1092 0.0 895
Msa0038000 AT2G27700.1 70.103 485 128 6 150 628 5 478 0.0 667
Msa0038000 AT2G27700.2 69.959 486 128 7 150 628 5 479 0.0 662
Msa0038000 AT1G17220.1 27.766 479 242 17 190 633 500 909 3.63e-27 119
Msa0038000 AT4G11160.1 23.297 558 325 16 190 714 216 703 1.83e-21 100
Msa0038000 AT4G11160.3 38.760 129 65 1 190 318 218 332 2.47e-21 99.4
Msa0038000 AT4G11160.2 23.297 558 325 16 190 714 218 705 2.49e-21 99.8

Find 358 sgRNAs with CRISPR-Local

Find 668 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTACGAAATTTGTGTAAA+AGG 0.120489 1_1:-67233029 None:intergenic
TCATCTATTTGATCAATTTA+AGG 0.120606 1_1:+67238665 Msa0038000:CDS
GAATTCACTAAAAGTAATTT+AGG 0.146710 1_1:+67241153 Msa0038000:three_prime_UTR
GAAAACCCTAATCTCATAAA+TGG 0.164657 1_1:+67233070 Msa0038000:five_prime_UTR
AATTCAAGCACATACCTTAA+TGG 0.180909 1_1:-67239355 None:intergenic
TCGCATAATCAACCGGTTTA+TGG 0.181960 1_1:-67239314 None:intergenic
TTGCAGGTTGACAGGCTTTA+TGG 0.183037 1_1:+67236352 Msa0038000:intron
CCTTTCTTTGTCTGATAAAT+AGG 0.186529 1_1:-67234698 None:intergenic
GTGTTCCATGCTTTGCATTT+TGG 0.208952 1_1:+67240957 Msa0038000:three_prime_UTR
TCTATGTGATATTGCAATTT+TGG 0.214686 1_1:+67236155 Msa0038000:CDS
GCTTCTCGGTCATGGTCTTT+TGG 0.220651 1_1:-67237362 None:intergenic
TGGCTCATTGGAAGCATTAT+TGG 0.222532 1_1:+67238434 Msa0038000:CDS
CAAGAAGGATCCGATTGTTT+TGG 0.225158 1_1:+67238785 Msa0038000:CDS
TTCTTGTTGAAGACACAATT+TGG 0.236922 1_1:-67238768 None:intergenic
GAACCGGTTGTTAGCTTTAC+AGG 0.257455 1_1:+67233523 Msa0038000:five_prime_UTR
GTATAGTAAATCACAAAATT+TGG 0.265554 1_1:-67240792 None:intergenic
GGTGGAAGTGTGTTTGCTTC+TGG 0.266460 1_1:+67233412 Msa0038000:five_prime_UTR
CACTTTCTTGTCAGCCGCTT+TGG 0.268956 1_1:-67234349 None:intergenic
GGTTCTGCCCCTGGTGCTTC+AGG 0.278743 1_1:+67234150 Msa0038000:five_prime_UTR
TTCTCGTCGTCGCGGATTGC+TGG 0.281368 1_1:-67233104 None:intergenic
CTTCCCCATTTATGAGATTA+GGG 0.297082 1_1:-67233075 None:intergenic
AGAAAGTGCCAAAGCATGTT+AGG 0.301941 1_1:+67234364 Msa0038000:five_prime_UTR
TTTAGTGAATTCAAACTATC+AGG 0.303132 1_1:-67241142 None:intergenic
AAGGCAGCGGCAGCAGCAGC+TGG 0.303633 1_1:+67234255 Msa0038000:five_prime_UTR
CATAGGTATGCATGCTTGTT+TGG 0.310986 1_1:+67240993 Msa0038000:three_prime_UTR
TCTTCCCCATTTATGAGATT+AGG 0.311680 1_1:-67233076 None:intergenic
TGATTTGGAATATATTAAAA+AGG 0.312978 1_1:+67238332 Msa0038000:CDS
ATTCATTGTTGCATTGAATA+AGG 0.320644 1_1:+67236251 Msa0038000:CDS
CCCTTTCTTCGAACCCTTCG+AGG 0.321277 1_1:-67233557 None:intergenic
AACTTGAGGTCTCGGGGTTC+AGG 0.322803 1_1:+67236132 Msa0038000:CDS
AGGGCAGAAAGTAGCCATTA+AGG 0.323078 1_1:+67239341 Msa0038000:CDS
GTGAGTGATGAAATCGAGTT+TGG 0.323250 1_1:+67233880 Msa0038000:five_prime_UTR
GTCCTTGACAGTTACCCTTT+TGG 0.324115 1_1:-67240763 None:intergenic
TCTTGGGAAGGGATACAAAT+TGG 0.327465 1_1:-67239252 None:intergenic
GGCTTACATGGACAACATTA+AGG 0.327960 1_1:+67238686 Msa0038000:CDS
TCCCAAGAGTTCATTGATAT+TGG 0.331197 1_1:+67239267 Msa0038000:CDS
TGCATCAGCTTTCAGTTCCT+TGG 0.331642 1_1:-67236052 None:intergenic
GCAGCAGGTTGTGCTGTAGC+AGG 0.333529 1_1:-67234081 None:intergenic
TAGGGATCTTGCAGAAGAAT+TGG 0.335361 1_1:+67238611 Msa0038000:CDS
CGTACGAAATTTGTGTAAAA+GGG 0.335560 1_1:-67233028 None:intergenic
AGTGTGTTTGCTTCTGGATT+TGG 0.335749 1_1:+67233418 Msa0038000:five_prime_UTR
TCTTCTACAGCTTCAATTAC+CGG 0.335849 1_1:-67234285 None:intergenic
TCTGCAAGATCCCTAGCTTC+AGG 0.339277 1_1:-67238603 None:intergenic
AATTCACTAAAAGTAATTTA+GGG 0.339278 1_1:+67241154 Msa0038000:three_prime_UTR
TGCATCTCCCTAACATGCTT+TGG 0.339681 1_1:-67234372 None:intergenic
CTAGATTGTCACTCAGTTCA+AGG 0.343186 1_1:+67236553 Msa0038000:intron
TCAGCTGCAGGCTTCGTAAC+AGG 0.343911 1_1:-67235766 None:intergenic
TTCCCTTCACTCGGCTTAGA+AGG 0.346826 1_1:-67235868 None:intergenic
GGCATCTACCCTTGGCTCAT+TGG 0.352679 1_1:+67238422 Msa0038000:CDS
AGTTGCTTTGCCTTGCCTCT+AGG 0.352806 1_1:-67232667 None:intergenic
CTCCTGCAGCTTGGATCCTC+TGG 0.358186 1_1:+67240740 Msa0038000:three_prime_UTR
TTCATTGAGTAAAGCTATTC+CGG 0.362489 1_1:+67233726 Msa0038000:five_prime_UTR
TGACCCATGATGCAGCAAAT+TGG 0.364112 1_1:-67235901 None:intergenic
ATCACATCCTTCTTGTGTAC+AGG 0.364120 1_1:-67238510 None:intergenic
TTAACACGAAGTTCCTTCAT+TGG 0.364194 1_1:-67237730 None:intergenic
GGGCTTGAACATGCTATTGC+TGG 0.370042 1_1:+67238279 Msa0038000:CDS
CGGTTTATGGTTATTCTCAA+TGG 0.370182 1_1:-67239301 None:intergenic
GAAAGAAGAAGCCCGGCGTT+TGG 0.370964 1_1:+67234595 Msa0038000:five_prime_UTR
CGGTATAATGCCGGACTTTG+AGG 0.371562 1_1:+67240617 Msa0038000:three_prime_UTR
GCTTCTGGATTTGGTGTGCT+TGG 0.371860 1_1:+67233427 Msa0038000:five_prime_UTR
TTCGCTGTATGTAAGCTTCT+CGG 0.376770 1_1:-67237376 None:intergenic
AAAACCCTAATCTCATAAAT+GGG 0.380417 1_1:+67233071 Msa0038000:five_prime_UTR
ATACCTTTAAAATGCCTTCA+AGG 0.381890 1_1:-67238818 None:intergenic
AGTTACCTTATTGCACTTGT+AGG 0.383336 1_1:-67236641 None:intergenic
CACTGGCAAAACCAAGCTTC+TGG 0.384093 1_1:+67235930 Msa0038000:CDS
CAACTTCGTTTGCAGATTGT+TGG 0.386207 1_1:+67239683 Msa0038000:intron
TGGCTACCAGTGTACCGTTT+TGG 0.388026 1_1:+67237494 Msa0038000:intron
ACGAGAGTATGCTACTATAT+TGG 0.389206 1_1:+67238560 Msa0038000:CDS
ATGATGTCAATCTGAATGAT+AGG 0.389984 1_1:+67234933 Msa0038000:CDS
CAGGAAGGTAAATTGTTAAC+TGG 0.390014 1_1:+67234566 Msa0038000:five_prime_UTR
GACCAATATCAATGAACTCT+TGG 0.397471 1_1:-67239269 None:intergenic
GCTCGAATTGTGGTAACAAT+TGG 0.397760 1_1:-67237691 None:intergenic
GGTTTCTCTTCCACCGCAAC+CGG 0.398483 1_1:-67233230 None:intergenic
CCACCGCCTTGTTGCGGCGG+AGG 0.398804 1_1:-67233128 None:intergenic
CTAACAGGAATATTCACTTC+TGG 0.399897 1_1:-67238471 None:intergenic
GTTGCTTTGCCTTGCCTCTA+GGG 0.401455 1_1:-67232666 None:intergenic
GTCGCCAATTTGCTGCATCA+TGG 0.404818 1_1:+67235897 Msa0038000:CDS
CCTATGTTTATAGCACTAAC+AGG 0.407601 1_1:-67238486 None:intergenic
CTGCAAGATCCCTAGCTTCA+GGG 0.408159 1_1:-67238602 None:intergenic
ACTAATAGTAATAACATATC+CGG 0.410722 1_1:-67237330 None:intergenic
TTCTTACCCGAGAAAGTGAT+TGG 0.411659 1_1:-67233667 None:intergenic
TCTTCAGTTTCTTCAGCTGC+AGG 0.413951 1_1:-67235778 None:intergenic
TTATTGAATGACTCGTGTCC+TGG 0.414476 1_1:-67236111 None:intergenic
GAAGAACAGCAGAAAATGTT+CGG 0.414887 1_1:+67239716 Msa0038000:CDS
TAATGATGATGAAGAGAAAT+CGG 0.414892 1_1:+67233468 Msa0038000:five_prime_UTR
CCTATTTATCAGACAAAGAA+AGG 0.419360 1_1:+67234698 Msa0038000:CDS
GTTCAGCCGGTTCCTGTAGT+AGG 0.420123 1_1:+67234129 Msa0038000:five_prime_UTR
ATATATTCCAAATCATCATC+AGG 0.422912 1_1:-67238324 None:intergenic
GGTAAAGCCTGATGATGATT+TGG 0.424032 1_1:+67238317 Msa0038000:CDS
TTGAGTGACTCTATAGTTTG+TGG 0.428244 1_1:-67236204 None:intergenic
CCTTTCTTCGCATAATCAAC+CGG 0.430053 1_1:-67239321 None:intergenic
CATTCAATAACTTGAGGTCT+CGG 0.430364 1_1:+67236124 Msa0038000:CDS
GAACACCAAATGTATACAAA+TGG 0.432746 1_1:-67240940 None:intergenic
CTCGATTTCATCACTCACTT+TGG 0.433153 1_1:-67233875 None:intergenic
CAGCAGGTTGTGCTGTAGCA+GGG 0.434057 1_1:-67234080 None:intergenic
TTGTGCCTACAAGTGCAATA+AGG 0.435172 1_1:+67236636 Msa0038000:CDS
TCCTCATTGCCTCCAAACGC+CGG 0.435876 1_1:-67234607 None:intergenic
AGCAATGACACAGCAGTCTA+AGG 0.435929 1_1:+67236408 Msa0038000:CDS
ATGATGATGTTGAGGATGAA+TGG 0.437230 1_1:+67234894 Msa0038000:CDS
ACTACTTCTTCAACAACTTC+AGG 0.437617 1_1:-67234863 None:intergenic
AAGCTTCTGGATTGCATTCG+AGG 0.438347 1_1:+67235943 Msa0038000:CDS
GCTTGGATCCTCTGGCCAAA+AGG 0.439197 1_1:+67240748 Msa0038000:three_prime_UTR
CAGCTTTGATTTCTTTGTGA+TGG 0.440327 1_1:-67238113 None:intergenic
TGGTGAGGGCGTTTGTGTCC+AGG 0.441481 1_1:+67238401 Msa0038000:CDS
CCCTGGTGCTTCAGGAGAAA+AGG 0.442140 1_1:+67234158 Msa0038000:five_prime_UTR
ACTCTTCCTGGCGCGGACAC+TGG 0.442324 1_1:+67234659 Msa0038000:CDS
TATCAGGACATTGTCATCAT+TGG 0.443347 1_1:-67241126 None:intergenic
AATGAAGGAACTTCGTGTTA+AGG 0.444264 1_1:+67237732 Msa0038000:CDS
ACAACGAATCGAAATCATAA+TGG 0.444429 1_1:+67234725 Msa0038000:CDS
TTTATCCTCAACCACAACTT+TGG 0.444603 1_1:-67235812 None:intergenic
TGCTGAGGAGGAGCCGCAGC+AGG 0.448228 1_1:-67234096 None:intergenic
GTTAATGGTGTTCTTCATGA+AGG 0.449872 1_1:+67237564 Msa0038000:CDS
ATTCAATAACTTGAGGTCTC+GGG 0.449916 1_1:+67236125 Msa0038000:CDS
TGTGTCATTGCTTTACGAAT+TGG 0.449988 1_1:-67236397 None:intergenic
AGGAAGAGGAAGAGAAGCAA+AGG 0.451717 1_1:+67234438 Msa0038000:five_prime_UTR
AGATTCAGAGGAACCTGAAA+AGG 0.452639 1_1:+67234805 Msa0038000:CDS
GGTGTCAGAGGATGCGGCTC+CGG 0.452789 1_1:+67233211 Msa0038000:five_prime_UTR
TGCTTTGTGCGGCGGTGAAA+AGG 0.453233 1_1:-67232941 None:intergenic
GATGCAACACTGAAAGTTCC+CGG 0.455894 1_1:+67236069 Msa0038000:CDS
TGCTGCGGCTCCTCCTCAGC+AGG 0.455982 1_1:+67234098 Msa0038000:five_prime_UTR
CTTTCACGTATGTTCTCAGC+AGG 0.456275 1_1:-67236027 None:intergenic
AGAGGATGCGGCTCCGGTTG+CGG 0.458787 1_1:+67233217 Msa0038000:five_prime_UTR
TCGCAACATTGCAGGTTGAC+AGG 0.458948 1_1:+67236344 Msa0038000:intron
TGATGAACCAATCACTTTCT+CGG 0.459759 1_1:+67233660 Msa0038000:five_prime_UTR
GACATAGGATGATCTGACTA+TGG 0.460108 1_1:+67240477 Msa0038000:intron
CCTCGAAGGGTTCGAAGAAA+GGG 0.460536 1_1:+67233557 Msa0038000:five_prime_UTR
CAAAGAAATCAAAGCTGCTA+TGG 0.462455 1_1:+67238119 Msa0038000:CDS
TTGGAAGTCAAGGTTATTGA+AGG 0.462841 1_1:+67237513 Msa0038000:CDS
TGATCAATTTAAGGCTTACA+TGG 0.463950 1_1:+67238674 Msa0038000:CDS
TTGGGAGTTGATATCCTTGA+AGG 0.466103 1_1:+67238804 Msa0038000:CDS
TTCCCTGTAAAGCTAACAAC+CGG 0.468099 1_1:-67233526 None:intergenic
GATAGAGGAACTTGAGAGAC+AGG 0.468572 1_1:+67234484 Msa0038000:five_prime_UTR
AAGAACAGCAGAAAATGTTC+GGG 0.470152 1_1:+67239717 Msa0038000:CDS
AGAAACTGAAGATAGAAAAC+AGG 0.470475 1_1:+67235789 Msa0038000:CDS
GATGCAATGATGCAGATAGA+AGG 0.470608 1_1:+67240675 Msa0038000:three_prime_UTR
GGTATAATGCCGGACTTTGA+GGG 0.472480 1_1:+67240618 Msa0038000:three_prime_UTR
CGGTCTTGAGCAGGATTGAC+AGG 0.472577 1_1:+67238376 Msa0038000:CDS
TTTCAATGTAACAGCGAAAG+AGG 0.476022 1_1:-67232981 None:intergenic
GATGAACCAATCACTTTCTC+GGG 0.476483 1_1:+67233661 Msa0038000:five_prime_UTR
TCCTCGAAGGGTTCGAAGAA+AGG 0.476498 1_1:+67233556 Msa0038000:five_prime_UTR
GAAGAGAAATCGGAGGTAAC+CGG 0.477907 1_1:+67233478 Msa0038000:five_prime_UTR
GGTCCACCAGTGTCCGCGCC+AGG 0.479029 1_1:-67234665 None:intergenic
AATGTTCAAGAAGGTGAGGC+TGG 0.479918 1_1:+67235970 Msa0038000:CDS
TATTCATCGTCATCGATAAC+CGG 0.480313 1_1:-67233170 None:intergenic
ACCAATATCAATGAACTCTT+GGG 0.480786 1_1:-67239268 None:intergenic
TGTGTCCAGGCATCTACCCT+TGG 0.481656 1_1:+67238414 Msa0038000:CDS
ACTGAAAGTTCCCGGTCTAC+TGG 0.483185 1_1:+67236077 Msa0038000:CDS
CCTCATTGCCTCCAAACGCC+GGG 0.486379 1_1:-67234606 None:intergenic
AGGGATCTTGCAGAAGAATT+GGG 0.486944 1_1:+67238612 Msa0038000:CDS
TCGCCAATTTGCTGCATCAT+GGG 0.487968 1_1:+67235898 Msa0038000:CDS
GATAAGCTTCTCGCAGAGCT+TGG 0.489009 1_1:+67234051 Msa0038000:five_prime_UTR
AGCCTCACCTTCTTGAACAT+TGG 0.489331 1_1:-67235968 None:intergenic
TGAGAATGATGATGGAGAAG+AGG 0.490930 1_1:+67233606 Msa0038000:five_prime_UTR
TGATGATGTTGAGGATGAAT+GGG 0.491154 1_1:+67234895 Msa0038000:CDS
AGAGGAGCGACGAAGGATAG+AGG 0.492105 1_1:+67234469 Msa0038000:five_prime_UTR
TCAAAGTCACCCCTGAAGCT+AGG 0.492751 1_1:+67238592 Msa0038000:CDS
CCGGTTGATTATGCGAAGAA+AGG 0.495046 1_1:+67239321 Msa0038000:CDS
TAGGGAGATGCAAGAACTAC+TGG 0.496180 1_1:+67234383 Msa0038000:five_prime_UTR
AGAGGAGAGTAAGAATGAAA+AGG 0.496191 1_1:+67233624 Msa0038000:five_prime_UTR
AAAGAAAGAATCTGCGGATG+AGG 0.496199 1_1:+67238716 Msa0038000:CDS
AATAACCTTGACTTCCAAAA+CGG 0.496574 1_1:-67237508 None:intergenic
CATTGAGAATAACCATAAAC+CGG 0.497395 1_1:+67239302 Msa0038000:CDS
GTATGTAAGCTTCTCGGTCA+TGG 0.499658 1_1:-67237370 None:intergenic
CTTGGATCCTCTGGCCAAAA+GGG 0.500718 1_1:+67240749 Msa0038000:three_prime_UTR
CCTGTAGTAGGTTCTGCCCC+TGG 0.500848 1_1:+67234141 Msa0038000:five_prime_UTR
CGATGACGATGAGGATGAAC+CGG 0.501281 1_1:+67233507 Msa0038000:five_prime_UTR
ATTTAATATTTCAGTGGTGA+AGG 0.501321 1_1:+67237303 Msa0038000:intron
TTCAGAATGAGTTCAATATG+AGG 0.501847 1_1:+67236434 Msa0038000:CDS
GTCATCAAAGGGTTCGAAGA+AGG 0.501993 1_1:+67233696 Msa0038000:five_prime_UTR
AAAAGAATAAGAAGAAGAGT+GGG 0.502262 1_1:+67234001 Msa0038000:five_prime_UTR
TATTGAATGACTCGTGTCCT+GGG 0.502284 1_1:-67236110 None:intergenic
CGGTTGATTATGCGAAGAAA+GGG 0.505603 1_1:+67239322 Msa0038000:CDS
AGGCAGATTCTCAATAGCAC+AGG 0.506514 1_1:+67234629 Msa0038000:CDS
ATTGGACGATTTCTGTTCAA+AGG 0.509473 1_1:-67241108 None:intergenic
CGAAGTTCCTTCATTGGATG+AGG 0.509629 1_1:-67237724 None:intergenic
CCTCCGCCGCAACAAGGCGG+TGG 0.509665 1_1:+67233128 Msa0038000:five_prime_UTR
AGAGGCTAAACGTAGAAAGA+AGG 0.510786 1_1:+67234511 Msa0038000:five_prime_UTR
GACCGAAGGTTCCCTTCACT+CGG 0.511610 1_1:-67235877 None:intergenic
ATGAGCCAAGGGTAGATGCC+TGG 0.511848 1_1:-67238419 None:intergenic
ATACACATCTGTGGTATACA+TGG 0.512971 1_1:+67240811 Msa0038000:three_prime_UTR
GGTTGAAGAAGTGGAGATGG+AGG 0.513489 1_1:+67234826 Msa0038000:CDS
ACGTGGAGTCGGTCTTGAGC+AGG 0.513755 1_1:+67238367 Msa0038000:CDS
ATATCAACTCCCAAAACAAT+CGG 0.514889 1_1:-67238795 None:intergenic
GGCCAGAGGATCCAAGCTGC+AGG 0.515164 1_1:-67240742 None:intergenic
AGCCGAGTGAAGGGAACCTT+CGG 0.515404 1_1:+67235875 Msa0038000:CDS
GCAGAACCTACTACAGGAAC+CGG 0.517619 1_1:-67234135 None:intergenic
ACTTCTATGCTCCTGCAGCT+TGG 0.517762 1_1:+67240731 Msa0038000:three_prime_UTR
AAAGGTTGAAGAAGTGGAGA+TGG 0.518426 1_1:+67234823 Msa0038000:CDS
CGTCTGTGTAGTGTGAGAGC+TGG 0.518847 1_1:+67241076 Msa0038000:three_prime_UTR
CTTCCTGGCGCGGACACTGG+TGG 0.519626 1_1:+67234662 Msa0038000:CDS
TGCTGGAGCTAGTTTATATG+TGG 0.519781 1_1:+67238296 Msa0038000:CDS
GGAGGAGGTGTCAGAGGATG+CGG 0.521052 1_1:+67233205 Msa0038000:five_prime_UTR
ACGAAAATTGCTTTGTGCGG+CGG 0.521104 1_1:-67232949 None:intergenic
GTCACTCAGTTCAAGGAACA+AGG 0.521657 1_1:+67236560 Msa0038000:CDS
CCTGTTAGTGCTATAAACAT+AGG 0.522577 1_1:+67238486 Msa0038000:CDS
ATTGACACCTCATCCAATGA+AGG 0.523422 1_1:+67237717 Msa0038000:CDS
AGCAGCAGCTGGAAGTGCAC+CGG 0.523466 1_1:+67234266 Msa0038000:five_prime_UTR
ATGTTCAAGAAGGTGAGGCT+GGG 0.524700 1_1:+67235971 Msa0038000:CDS
TGGGAGGACTAAAGAAGAGG+AGG 0.525672 1_1:+67234020 Msa0038000:five_prime_UTR
TACATACAGCGAAGAAGTGC+AGG 0.526176 1_1:+67237386 Msa0038000:CDS
AGAATAAGAAGAAGAGTGGG+AGG 0.527306 1_1:+67234004 Msa0038000:five_prime_UTR
CAAAGTCACCCCTGAAGCTA+GGG 0.528771 1_1:+67238593 Msa0038000:CDS
AGGTTGACAGGCTTTATGGC+TGG 0.530442 1_1:+67236356 Msa0038000:intron
TCGAATGCAATCCAGAAGCT+TGG 0.530972 1_1:-67235941 None:intergenic
TTTCCACCGCCTTGTTGCGG+CGG 0.531546 1_1:-67233131 None:intergenic
GAAAGTGCCAAAGCATGTTA+GGG 0.533187 1_1:+67234365 Msa0038000:five_prime_UTR
TTAATGGTGTTCTTCATGAA+GGG 0.534561 1_1:+67237565 Msa0038000:CDS
GACTATGGAGGAATGGAAGC+TGG 0.535656 1_1:+67240492 Msa0038000:CDS
ACCTGAAAAGGTTGAAGAAG+TGG 0.535666 1_1:+67234817 Msa0038000:CDS
TGAGAGAAAGCAAATATTCA+CGG 0.537618 1_1:+67240867 Msa0038000:three_prime_UTR
GTCAAGGTTATTGAAGGCCA+TGG 0.537843 1_1:+67237519 Msa0038000:CDS
TCACATCCTTCTTGTGTACA+GGG 0.538962 1_1:-67238509 None:intergenic
GTACGTTGCACCAATCTGTT+GGG 0.541158 1_1:-67236001 None:intergenic
AAAGAAATCAAAGCTGCTAT+GGG 0.542406 1_1:+67238120 Msa0038000:CDS
GAAGCAAAGGAAAGAAGAAG+AGG 0.544089 1_1:+67234451 Msa0038000:five_prime_UTR
GGGAATCAAGATCACTGCCC+AGG 0.545100 1_1:+67238140 Msa0038000:CDS
TGAGTGATGAAATCGAGTTT+GGG 0.545205 1_1:+67233881 Msa0038000:five_prime_UTR
TCTGTATCTGAGTCTGCTAA+AGG 0.545690 1_1:+67233763 Msa0038000:five_prime_UTR
AGTACGTTGCACCAATCTGT+TGG 0.546668 1_1:-67236002 None:intergenic
AGAGGCAAGGCAAAGCAACT+TGG 0.547121 1_1:+67232670 Msa0038000:five_prime_UTR
GTACGAAATTTGTGTAAAAG+GGG 0.548442 1_1:-67233027 None:intergenic
GAGTGGGAGGACTAAAGAAG+AGG 0.548679 1_1:+67234017 Msa0038000:five_prime_UTR
TTTGACAATTGGTTCAGGCT+CGG 0.549296 1_1:-67234984 None:intergenic
CTCATCGTCATCGCCCTCAC+CGG 0.549764 1_1:-67233497 None:intergenic
AAATCGGAGGTAACCGGTGA+GGG 0.551033 1_1:+67233484 Msa0038000:five_prime_UTR
AGCAGGTTGTGCTGTAGCAG+GGG 0.552590 1_1:-67234079 None:intergenic
GGTATCAATAACCAGTAGAC+CGG 0.552679 1_1:-67236088 None:intergenic
ATGATCTGACTATGGAGGAA+TGG 0.553038 1_1:+67240485 Msa0038000:CDS
AGAAGAAGCCCGGCGTTTGG+AGG 0.555273 1_1:+67234598 Msa0038000:five_prime_UTR
CTAATAGTAATAACATATCC+GGG 0.555274 1_1:-67237329 None:intergenic
GAGTAAAGCTATTCCGGAGG+AGG 0.555869 1_1:+67233732 Msa0038000:five_prime_UTR
CGGTGGAAAATCAAAGAAGA+AGG 0.555949 1_1:+67233145 Msa0038000:five_prime_UTR
CAACATCAATAGTAGTTCCA+TGG 0.556648 1_1:-67237536 None:intergenic
GCATTAGATGAGAATGATGA+TGG 0.559178 1_1:+67233598 Msa0038000:five_prime_UTR
TGTTCAAGAAGGTGAGGCTG+GGG 0.559825 1_1:+67235972 Msa0038000:CDS
TGTTATTACTATTAGTTCAG+TGG 0.560033 1_1:+67237337 Msa0038000:CDS
CATAGGCCCTGTACACAAGA+AGG 0.561171 1_1:+67238503 Msa0038000:CDS
TTTCAGTGGTGAAGGAATCC+CGG 0.561971 1_1:+67237311 Msa0038000:intron
TGCTTTCTCTCATCGAACAA+AGG 0.562604 1_1:-67240856 None:intergenic
CAAAACCAAAATGCAAAGCA+TGG 0.562929 1_1:-67240962 None:intergenic
GAAGGCACGGCAGACAGTTG+TGG 0.563477 1_1:-67235850 None:intergenic
ACAGAAACACTATCCTCCTC+CGG 0.563721 1_1:-67233745 None:intergenic
TGAAATGTTCGGTATAATGC+CGG 0.564900 1_1:+67240608 Msa0038000:three_prime_UTR
TCAAAGGGTTCGAAGAAGGC+AGG 0.566364 1_1:+67233700 Msa0038000:five_prime_UTR
ACTACTGGCTAGAAGAAAAG+AGG 0.566570 1_1:+67234398 Msa0038000:five_prime_UTR
AAGAAGAAGAGGAGCGACGA+AGG 0.568334 1_1:+67234462 Msa0038000:five_prime_UTR
ACAGGCCAAAGTTGTGGTTG+AGG 0.569051 1_1:+67235807 Msa0038000:CDS
TGATGTCAATCTGAATGATA+GGG 0.569686 1_1:+67234934 Msa0038000:CDS
GTAAGCAGAAAGAAGAAGCC+CGG 0.569714 1_1:+67234588 Msa0038000:five_prime_UTR
GGTAAGATCTTCAGAACACA+TGG 0.572020 1_1:-67238747 None:intergenic
ACACAAGAAGGATGTGATGA+AGG 0.572047 1_1:+67238515 Msa0038000:CDS
CGGAGTGGAGGAGGTGTCAG+AGG 0.573069 1_1:+67233199 Msa0038000:five_prime_UTR
GCAGGATGATAAAGTTCAGC+CGG 0.573080 1_1:+67234116 Msa0038000:five_prime_UTR
GTGCCTTCTAAGCCGAGTGA+AGG 0.573219 1_1:+67235865 Msa0038000:CDS
ATATTCTATCGGAGTGGAGG+AGG 0.574722 1_1:+67233190 Msa0038000:five_prime_UTR
GGATGCGGCTCCGGTTGCGG+TGG 0.575979 1_1:+67233220 Msa0038000:five_prime_UTR
GGGCATGACTCTTCCTGGCG+CGG 0.576478 1_1:+67234652 Msa0038000:CDS
ATATCAATGAACTCTTGGGA+AGG 0.576746 1_1:-67239264 None:intergenic
GTTGCGGTGGAAGAGAAACC+CGG 0.576756 1_1:+67233233 Msa0038000:five_prime_UTR
AGAAAAGGAGAAGAAGGCAG+CGG 0.577587 1_1:+67234242 Msa0038000:five_prime_UTR
AGTAAGAGTGAAGAGGTCGT+TGG 0.577832 1_1:+67233961 Msa0038000:five_prime_UTR
GGGAAGAAGAAATCCTCGAA+GGG 0.578909 1_1:+67233544 Msa0038000:five_prime_UTR
TATCAATGAACTCTTGGGAA+GGG 0.579843 1_1:-67239263 None:intergenic
TACTGCTGATTTAGATTCAG+AGG 0.580560 1_1:+67234793 Msa0038000:CDS
ACTTGAGAGACAGGCAGAAG+AGG 0.581232 1_1:+67234493 Msa0038000:five_prime_UTR
AGATGAAAGTGTTGAAGCAA+CGG 0.581844 1_1:+67234766 Msa0038000:CDS
TTGGTCGTGGACATTATGCA+TGG 0.582868 1_1:+67236174 Msa0038000:CDS
GGCCAAAAGGGTAACTGTCA+AGG 0.582961 1_1:+67240761 Msa0038000:three_prime_UTR
ATATTACCATTGTCAACACT+AGG 0.583473 1_1:-67233937 None:intergenic
AGGATTGACAGGAGTGGTGA+GGG 0.584013 1_1:+67238387 Msa0038000:CDS
ATTTGGTGTGCTTGGTGATG+AGG 0.584128 1_1:+67233435 Msa0038000:five_prime_UTR
TGCTACAGCACAACCTGCTG+CGG 0.584367 1_1:+67234083 Msa0038000:five_prime_UTR
TTCAATAACTTGAGGTCTCG+GGG 0.585880 1_1:+67236126 Msa0038000:CDS
TGATTTACTATACACATCTG+TGG 0.586356 1_1:+67240802 Msa0038000:three_prime_UTR
TAGAAAACAGGCCAAAGTTG+TGG 0.586435 1_1:+67235801 Msa0038000:CDS
TAATGGTGTTCTTCATGAAG+GGG 0.587624 1_1:+67237566 Msa0038000:CDS
ACTTTATCATCCTGCTGAGG+AGG 0.588843 1_1:-67234108 None:intergenic
TTTATGGTTATTCTCAATGG+AGG 0.590292 1_1:-67239298 None:intergenic
TGCAAGATCCCTAGCTTCAG+GGG 0.591230 1_1:-67238601 None:intergenic
AGCTTTGGAAGACGTGGAGT+CGG 0.591536 1_1:+67238356 Msa0038000:CDS
CCAGGGGCAGAACCTACTAC+AGG 0.591678 1_1:-67234141 None:intergenic
CGAGGTACCAATGTTCAAGA+AGG 0.591705 1_1:+67235961 Msa0038000:CDS
GAGAGAAAGCAAATATTCAC+GGG 0.592615 1_1:+67240868 Msa0038000:three_prime_UTR
GTTCAATATGAGGGTCACTC+AGG 0.592840 1_1:+67236444 Msa0038000:CDS
TGAAGTTGTTGAAGAAGTAG+TGG 0.593967 1_1:+67234865 Msa0038000:CDS
AAAAGTGGTGGTGGTAGTAG+TGG 0.594686 1_1:+67233391 Msa0038000:five_prime_UTR
GGATGAAGATGATGATGTTG+AGG 0.594806 1_1:+67234886 Msa0038000:CDS
GAGAATCCTCCGCCGCAACA+AGG 0.596347 1_1:+67233122 Msa0038000:five_prime_UTR
TGCAGCAAATTGGCGACCGA+AGG 0.597673 1_1:-67235891 None:intergenic
TGCCTTCTAAGCCGAGTGAA+GGG 0.599569 1_1:+67235866 Msa0038000:CDS
TCTGCATCATTGCATCTACA+AGG 0.602418 1_1:-67240668 None:intergenic
AGTGGTGGTGGTAGTAGTGG+TGG 0.603621 1_1:+67233394 Msa0038000:five_prime_UTR
CAGGATTGACAGGAGTGGTG+AGG 0.604875 1_1:+67238386 Msa0038000:CDS
AAAATCAAAGAAGAAGGCTC+CGG 0.604903 1_1:+67233151 Msa0038000:five_prime_UTR
GGCGTTTGGAGGCAATGAGG+AGG 0.605409 1_1:+67234609 Msa0038000:exon
AAAGGCAGCTTTGGAAGACG+TGG 0.608385 1_1:+67238350 Msa0038000:CDS
TGGTGCTTCAGGAGAAAAGG+AGG 0.608601 1_1:+67234161 Msa0038000:five_prime_UTR
CTATTTATCAGACAAAGAAA+GGG 0.609015 1_1:+67234699 Msa0038000:CDS
GATGACGATGAATATTCTAT+CGG 0.610557 1_1:+67233179 Msa0038000:five_prime_UTR
ATAATGCTTCCAATGAGCCA+AGG 0.611270 1_1:-67238431 None:intergenic
TTGCTGCATCATGGGTCATG+TGG 0.613343 1_1:+67235906 Msa0038000:CDS
TACCAATGTTCAAGAAGGTG+AGG 0.614228 1_1:+67235966 Msa0038000:CDS
TAATATAAGTAAGAGTGAAG+AGG 0.616758 1_1:+67233954 Msa0038000:five_prime_UTR
TTCACTCGGCTTAGAAGGCA+CGG 0.621700 1_1:-67235863 None:intergenic
GTTTCTTGTACAAGTCACTC+TGG 0.621796 1_1:-67240710 None:intergenic
CAGATTCTCAATAGCACAGG+GGG 0.622051 1_1:+67234632 Msa0038000:CDS
AAATTGTGTCTTCAACAAGA+AGG 0.623805 1_1:+67238770 Msa0038000:CDS
GGCAGATTCTCAATAGCACA+GGG 0.625757 1_1:+67234630 Msa0038000:CDS
CGGTGAGGGCGATGACGATG+AGG 0.627256 1_1:+67233498 Msa0038000:five_prime_UTR
AACAGCAGAAAATGTTCGGG+AGG 0.628525 1_1:+67239720 Msa0038000:CDS
TAATGCTTCCAATGAGCCAA+GGG 0.629489 1_1:-67238430 None:intergenic
CCCGGCGTTTGGAGGCAATG+AGG 0.629537 1_1:+67234606 Msa0038000:exon
TGAATATTCTATCGGAGTGG+AGG 0.629646 1_1:+67233187 Msa0038000:five_prime_UTR
AATTACAAACCCTAGAGGCA+AGG 0.631095 1_1:+67232657 None:intergenic
TGTCAATAAAGCTCGAATTG+TGG 0.631490 1_1:-67237701 None:intergenic
AAAACGAAAATTGCTTTGTG+CGG 0.632518 1_1:-67232952 None:intergenic
AGGGAAGAAGAAATCCTCGA+AGG 0.633393 1_1:+67233543 Msa0038000:five_prime_UTR
CTCGAAGGGTTCGAAGAAAG+GGG 0.633881 1_1:+67233558 Msa0038000:five_prime_UTR
GAGTGAAAGTGTAAATGTTG+TGG 0.635334 1_1:+67233903 Msa0038000:five_prime_UTR
TCAGAATGAGTTCAATATGA+GGG 0.640267 1_1:+67236435 Msa0038000:CDS
ATAGGATGATCTGACTATGG+AGG 0.643473 1_1:+67240480 Msa0038000:intron
ACGAGTCATTCAATAACTTG+AGG 0.644529 1_1:+67236118 Msa0038000:CDS
CTACTGGTTATTGATACCCC+AGG 0.645521 1_1:+67236093 Msa0038000:CDS
TTGCGGTGGAAGAGAAACCC+GGG 0.650130 1_1:+67233234 Msa0038000:five_prime_UTR
TGATGATGAAGAGAAATCGG+AGG 0.651638 1_1:+67233471 Msa0038000:five_prime_UTR
AACCGGTTGTTAGCTTTACA+GGG 0.652337 1_1:+67233524 Msa0038000:five_prime_UTR
GTATTCATTAAAGATAAACA+AGG 0.654702 1_1:+67240578 Msa0038000:three_prime_UTR
TTCATCTGTCTTGACAGCAG+CGG 0.655555 1_1:-67234750 None:intergenic
AAACCCTAATCTCATAAATG+GGG 0.655994 1_1:+67233072 Msa0038000:five_prime_UTR
TGAAAGTGTAAATGTTGTGG+AGG 0.660670 1_1:+67233906 Msa0038000:five_prime_UTR
CGATGAATATTCTATCGGAG+TGG 0.661588 1_1:+67233184 Msa0038000:five_prime_UTR
ATCATGGGTCATGTGGACAC+TGG 0.664092 1_1:+67235913 Msa0038000:CDS
AGGGTAACTGTCAAGGACGA+AGG 0.664505 1_1:+67240768 Msa0038000:three_prime_UTR
GTTCAAGAAGGTGAGGCTGG+GGG 0.665074 1_1:+67235973 Msa0038000:CDS
GAAATCGGAGGTAACCGGTG+AGG 0.668178 1_1:+67233483 Msa0038000:five_prime_UTR
ATTGAATGACTCGTGTCCTG+GGG 0.670625 1_1:-67236109 None:intergenic
TGGTGATGATGAGAAAGATG+AGG 0.670930 1_1:+67233786 Msa0038000:five_prime_UTR
TTGAGCAGGATTGACAGGAG+TGG 0.672991 1_1:+67238381 Msa0038000:CDS
GTATCTGAGTCTGCTAAAGG+TGG 0.673325 1_1:+67233766 Msa0038000:five_prime_UTR
TGAACTTTATCATCCTGCTG+AGG 0.673872 1_1:-67234111 None:intergenic
GTATCAATAACCAGTAGACC+GGG 0.674744 1_1:-67236087 None:intergenic
AAGGGTTCGAAGAAGGCAGG+TGG 0.678507 1_1:+67233703 Msa0038000:five_prime_UTR
GAGAAGCCTAGTGTTGACAA+TGG 0.678840 1_1:+67233931 Msa0038000:five_prime_UTR
TCACTCAGTTCAAGGAACAA+GGG 0.682333 1_1:+67236561 Msa0038000:CDS
GCGGAGGATTCTCGTCGTCG+CGG 0.685176 1_1:-67233112 None:intergenic
ATTGAGTAAAGCTATTCCGG+AGG 0.685642 1_1:+67233729 Msa0038000:five_prime_UTR
GGTGCTTCAGGAGAAAAGGA+GGG 0.687014 1_1:+67234162 Msa0038000:five_prime_UTR
AGCTGTAGAAGAGAAAGCTG+AGG 0.688379 1_1:+67234296 Msa0038000:five_prime_UTR
GATGTCAATCTGAATGATAG+GGG 0.693218 1_1:+67234935 Msa0038000:CDS
TCGAAGGGTTCGAAGAAAGG+GGG 0.694476 1_1:+67233559 Msa0038000:five_prime_UTR
AATCCTCCGCCGCAACAAGG+CGG 0.709148 1_1:+67233125 Msa0038000:five_prime_UTR
TTACATGGACAACATTAAGG+AGG 0.709891 1_1:+67238689 Msa0038000:CDS
GAACATACGTGAAAGAACCA+AGG 0.716522 1_1:+67236035 Msa0038000:CDS
AAATGATTCGAAGACCAAAG+CGG 0.720285 1_1:+67234335 Msa0038000:five_prime_UTR
GTAAGATCTTCAGAACACAT+GGG 0.723306 1_1:-67238746 None:intergenic
AGTACAATTACAAACCCTAG+AGG 0.738851 1_1:+67232652 None:intergenic
TATGGAGGAATGGAAGCTGG+TGG 0.758669 1_1:+67240495 Msa0038000:CDS
GCAGATTCTCAATAGCACAG+GGG 0.788332 1_1:+67234631 Msa0038000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAGTATTAAATTTTACA+AGG - chr1_1:67235678-67235697 None:intergenic 10.0%
!! AACTAATAAAGTTATAATAT+AGG + chr1_1:67237666-67237685 Msa0038000:intron 10.0%
!! ACTAATAAAGTTATAATATA+GGG + chr1_1:67237667-67237686 Msa0038000:intron 10.0%
!!! AATTAGCAATTTTATATTTA+TGG + chr1_1:67238991-67239010 Msa0038000:intron 10.0%
!!! CATACATATTTTTTTTAATA+TGG + chr1_1:67239994-67240013 Msa0038000:intron 10.0%
!!! TTAATAATATACATTTTTTG+TGG + chr1_1:67240219-67240238 Msa0038000:intron 10.0%
!! AATAAACTAGTAAATTATTG+TGG + chr1_1:67235347-67235366 Msa0038000:intron 15.0%
!! ATAAACTAGTAAATTATTGT+GGG + chr1_1:67235348-67235367 Msa0038000:intron 15.0%
!!! AGTTTTTTTGTTTTTGTTTT+TGG + chr1_1:67236473-67236492 Msa0038000:intron 15.0%
!! TATTACAAAAACAAAGAAAT+GGG + chr1_1:67236599-67236618 Msa0038000:CDS 15.0%
!! AAATAATTGATGTAAAATGT+AGG - chr1_1:67236981-67237000 None:intergenic 15.0%
!!! TTTTACATCAATTATTTTGT+TGG + chr1_1:67236984-67237003 Msa0038000:intron 15.0%
!! TATATGTAATACTATAGTTA+TGG - chr1_1:67237239-67237258 None:intergenic 15.0%
!! TTTAGTATTTAATATTTCAG+TGG + chr1_1:67237297-67237316 Msa0038000:intron 15.0%
!!! TGATTTGGAATATATTAAAA+AGG + chr1_1:67238332-67238351 Msa0038000:CDS 15.0%
!! AAAGAAATAAAAATGTATAG+AGG + chr1_1:67239632-67239651 Msa0038000:intron 15.0%
!! ATATTCTCAAAACTAATTAT+CGG + chr1_1:67239795-67239814 Msa0038000:intron 15.0%
!!! TATTTTTTTTAATATGGATG+AGG + chr1_1:67240000-67240019 Msa0038000:intron 15.0%
!! ATTACTCATTTAACTATTAT+TGG + chr1_1:67240411-67240430 Msa0038000:intron 15.0%
!! AATTCACTAAAAGTAATTTA+GGG + chr1_1:67241154-67241173 Msa0038000:three_prime_UTR 15.0%
!!! ATCATCATCATTATCTTTTT+TGG - chr1_1:67233291-67233310 None:intergenic 20.0%
!!! CTTATTCTTTTTCTTATTCT+TGG - chr1_1:67233992-67234011 None:intergenic 20.0%
!! AAAAAAGAAGAAAAAGAAGA+AGG + chr1_1:67234215-67234234 Msa0038000:five_prime_UTR 20.0%
!!! TTAATCTCTTTTTTGACAAT+TGG - chr1_1:67234998-67235017 None:intergenic 20.0%
!! GTCAAAAAAGAGATTAAAAA+TGG + chr1_1:67235001-67235020 Msa0038000:CDS 20.0%
!!! AATATAAATTGATGCTACTT+TGG + chr1_1:67235223-67235242 Msa0038000:intron 20.0%
!!! TTTTTTGAATTTTTTTCTGC+TGG + chr1_1:67235267-67235286 Msa0038000:intron 20.0%
!!! TTCCAATATATGTTTTTTAC+AGG + chr1_1:67236299-67236318 Msa0038000:intron 20.0%
!! AACCTGTAAAAAACATATAT+TGG - chr1_1:67236304-67236323 None:intergenic 20.0%
!! GTATTACAAAAACAAAGAAA+TGG + chr1_1:67236598-67236617 Msa0038000:CDS 20.0%
!! ACTAATAGTAATAACATATC+CGG - chr1_1:67237333-67237352 None:intergenic 20.0%
!!! ATTGATGTTGTTTTAGTTAA+TGG + chr1_1:67237549-67237568 Msa0038000:CDS 20.0%
!!! ATTTATTTTAAAGCTGGTTT+GGG + chr1_1:67237778-67237797 Msa0038000:intron 20.0%
!! TCATCTATTTGATCAATTTA+AGG + chr1_1:67238665-67238684 Msa0038000:CDS 20.0%
!!! AATTTTATATTTATGGCCTA+TGG + chr1_1:67238998-67239017 Msa0038000:intron 20.0%
!! TATTCTCAAAACTAATTATC+GGG + chr1_1:67239796-67239815 Msa0038000:intron 20.0%
!! TTGAAACTATGTAAAATAAG+TGG - chr1_1:67240165-67240184 None:intergenic 20.0%
!! TGTATATTATTAACCACTTT+CGG - chr1_1:67240212-67240231 None:intergenic 20.0%
!! TAAAAAATTGACCCAAAAAA+GGG + chr1_1:67240328-67240347 Msa0038000:intron 20.0%
!!! TAACTATTATTGGATTTTGT+TGG + chr1_1:67240421-67240440 Msa0038000:intron 20.0%
!! GTATTCATTAAAGATAAACA+AGG + chr1_1:67240578-67240597 Msa0038000:three_prime_UTR 20.0%
!! GTATAGTAAATCACAAAATT+TGG - chr1_1:67240795-67240814 None:intergenic 20.0%
!!! ATTTTCCATTTGTATACATT+TGG + chr1_1:67240935-67240954 Msa0038000:three_prime_UTR 20.0%
!! GAATTCACTAAAAGTAATTT+AGG + chr1_1:67241153-67241172 Msa0038000:three_prime_UTR 20.0%
! AAAACCCTAATCTCATAAAT+GGG + chr1_1:67233071-67233090 Msa0038000:five_prime_UTR 25.0%
!!! TGAATGAAATTGTTTTTGCT+GGG + chr1_1:67233348-67233367 Msa0038000:five_prime_UTR 25.0%
!! TAATGATGATGAAGAGAAAT+CGG + chr1_1:67233468-67233487 Msa0038000:five_prime_UTR 25.0%
! TAAGAAAAAGAAGTCATCAA+AGG + chr1_1:67233684-67233703 Msa0038000:five_prime_UTR 25.0%
! AAGAAAAAGAAGTCATCAAA+GGG + chr1_1:67233685-67233704 Msa0038000:five_prime_UTR 25.0%
!! AAGTCTTCTAAAAAGAAAAG+TGG + chr1_1:67233841-67233860 Msa0038000:five_prime_UTR 25.0%
! TAATATAAGTAAGAGTGAAG+AGG + chr1_1:67233954-67233973 Msa0038000:five_prime_UTR 25.0%
! AAAAAGAATAAGAAGAAGAG+TGG + chr1_1:67234000-67234019 Msa0038000:five_prime_UTR 25.0%
! AAAAGAATAAGAAGAAGAGT+GGG + chr1_1:67234001-67234020 Msa0038000:five_prime_UTR 25.0%
!!! CTTCTTTTTCTTCTTTTTTG+CGG - chr1_1:67234214-67234233 None:intergenic 25.0%
! AAAGAAGAAGGAAAAAGAAA+AGG + chr1_1:67234227-67234246 Msa0038000:five_prime_UTR 25.0%
! AAGAAAAAAGAAAAAGGAAG+AGG + chr1_1:67234424-67234443 Msa0038000:five_prime_UTR 25.0%
! TAGAAAGAAGGAAAAAGAAA+AGG + chr1_1:67234523-67234542 Msa0038000:five_prime_UTR 25.0%
!!! TGATAAATAGGTTTTTTGGA+TGG - chr1_1:67234689-67234708 None:intergenic 25.0%
!!! TGTCTGATAAATAGGTTTTT+TGG - chr1_1:67234693-67234712 None:intergenic 25.0%
! CTATTTATCAGACAAAGAAA+GGG + chr1_1:67234699-67234718 Msa0038000:CDS 25.0%
! TAAAATTCTAACACTACAGT+AGG - chr1_1:67235201-67235220 None:intergenic 25.0%
!!! GCTACTTTGGAATATTTTTA+TGG + chr1_1:67235236-67235255 Msa0038000:intron 25.0%
! AAGAAATAGAAATACAGTGT+TGG - chr1_1:67235456-67235475 None:intergenic 25.0%
!! TCTATGTGATATTGCAATTT+TGG + chr1_1:67236155-67236174 Msa0038000:CDS 25.0%
! CACTCAATCTATTAAAAATG+AGG + chr1_1:67236220-67236239 Msa0038000:CDS 25.0%
! ATTCATTGTTGCATTGAATA+AGG + chr1_1:67236251-67236270 Msa0038000:CDS 25.0%
!!! TTTTTGTTTTTGGTAAGTTG+TGG + chr1_1:67236483-67236502 Msa0038000:intron 25.0%
! TGAAACAAGAAAAATTAGCA+TGG - chr1_1:67236530-67236549 None:intergenic 25.0%
! TGTAGCATTGTATTACAAAA+GGG + chr1_1:67236695-67236714 Msa0038000:intron 25.0%
!!! AATAGTGTTGACGATAATAT+AGG + chr1_1:67236919-67236938 Msa0038000:intron 25.0%
!!! TCAATTATTTTGTTGGTAAC+AGG + chr1_1:67236991-67237010 Msa0038000:intron 25.0%
!! TTTTCACTATCATTAGAAAG+AGG + chr1_1:67237047-67237066 Msa0038000:intron 25.0%
! ATTTAATATTTCAGTGGTGA+AGG + chr1_1:67237303-67237322 Msa0038000:intron 25.0%
! CTAATAGTAATAACATATCC+GGG - chr1_1:67237332-67237351 None:intergenic 25.0%
! TGTTATTACTATTAGTTCAG+TGG + chr1_1:67237337-67237356 Msa0038000:CDS 25.0%
! CAAATAACAGTTAAACAGTT+AGG - chr1_1:67237470-67237489 None:intergenic 25.0%
! AAAGCAAGTATTAATACATG+TGG - chr1_1:67237638-67237657 None:intergenic 25.0%
! ATCGAATGCAAAAGATATAA+TGG - chr1_1:67237760-67237779 None:intergenic 25.0%
!!! CATTCGATTTATTTTAAAGC+TGG + chr1_1:67237772-67237791 Msa0038000:intron 25.0%
!!! GATTTATTTTAAAGCTGGTT+TGG + chr1_1:67237777-67237796 Msa0038000:intron 25.0%
! AAGGGATTTAGAAATTTGAA+TGG + chr1_1:67237808-67237827 Msa0038000:intron 25.0%
! AGGGATTTAGAAATTTGAAT+GGG + chr1_1:67237809-67237828 Msa0038000:intron 25.0%
! TTATGAGATGTTTAACATGA+AGG + chr1_1:67237879-67237898 Msa0038000:intron 25.0%
!! ATTTTTCCATCATTGGAATT+TGG + chr1_1:67237962-67237981 Msa0038000:intron 25.0%
!! AATTTGGAATATGTCAATTG+AGG + chr1_1:67237978-67237997 Msa0038000:intron 25.0%
!! ATTTGGAATATGTCAATTGA+GGG + chr1_1:67237979-67237998 Msa0038000:intron 25.0%
! ATCAATATCATTAAGTACCT+GGG - chr1_1:67238160-67238179 None:intergenic 25.0%
! AAAACCATAGTTATATAGAC+TGG - chr1_1:67238195-67238214 None:intergenic 25.0%
!!! ATATGATTTCTTGCTATTTC+AGG + chr1_1:67238257-67238276 Msa0038000:intron 25.0%
!!! TATGATTTCTTGCTATTTCA+GGG + chr1_1:67238258-67238277 Msa0038000:intron 25.0%
! ATATATTCCAAATCATCATC+AGG - chr1_1:67238327-67238346 None:intergenic 25.0%
! ATATATTAAAAAGGCAGCTT+TGG + chr1_1:67238341-67238360 Msa0038000:CDS 25.0%
! CAACTAATGAATTTATACCA+AGG - chr1_1:67238933-67238952 None:intergenic 25.0%
!! AAATGAGGAGATAGAAATTT+TGG + chr1_1:67239044-67239063 Msa0038000:intron 25.0%
!! AACATTTTTACTGTATCAGA+AGG - chr1_1:67239086-67239105 None:intergenic 25.0%
! TATCTCAAACTTCGTTTAAT+GGG - chr1_1:67239427-67239446 None:intergenic 25.0%
! ATATCTCAAACTTCGTTTAA+TGG - chr1_1:67239428-67239447 None:intergenic 25.0%
!! ATTAAACGAAGTTTGAGATA+TGG + chr1_1:67239427-67239446 Msa0038000:intron 25.0%
! TGAAATTTATGTTCCAAAAG+TGG - chr1_1:67240099-67240118 None:intergenic 25.0%
!! AAAAAATTCACAGAAGTACA+TGG + chr1_1:67240183-67240202 Msa0038000:intron 25.0%
!! AAAATACTCCTCTTTTTCTT+AGG + chr1_1:67240292-67240311 Msa0038000:intron 25.0%
!! AAATACTCCTCTTTTTCTTA+GGG + chr1_1:67240293-67240312 Msa0038000:intron 25.0%
!!! TTTTTTTCCCTAAGAAAAAG+AGG - chr1_1:67240303-67240322 None:intergenic 25.0%
! GTAAAAAATTGACCCAAAAA+AGG + chr1_1:67240327-67240346 Msa0038000:intron 25.0%
! GTTAAATGAGTAATGATAAC+TGG - chr1_1:67240405-67240424 None:intergenic 25.0%
! TACCATTGAATTATTGACAT+AGG + chr1_1:67240462-67240481 Msa0038000:intron 25.0%
! ATCCTATGTCAATAATTCAA+TGG - chr1_1:67240467-67240486 None:intergenic 25.0%
! TTTAGTGAATTCAAACTATC+AGG - chr1_1:67241145-67241164 None:intergenic 25.0%
TATAAAAACACAGTAGCGAA+TGG - chr1_1:67232889-67232908 None:intergenic 30.0%
AAAACGAAAATTGCTTTGTG+CGG - chr1_1:67232955-67232974 None:intergenic 30.0%
GTACGAAATTTGTGTAAAAG+GGG - chr1_1:67233030-67233049 None:intergenic 30.0%
CGTACGAAATTTGTGTAAAA+GGG - chr1_1:67233031-67233050 None:intergenic 30.0%
TCGTACGAAATTTGTGTAAA+AGG - chr1_1:67233032-67233051 None:intergenic 30.0%
GAAAACCCTAATCTCATAAA+TGG + chr1_1:67233070-67233089 Msa0038000:five_prime_UTR 30.0%
AAACCCTAATCTCATAAATG+GGG + chr1_1:67233072-67233091 Msa0038000:five_prime_UTR 30.0%
GATGACGATGAATATTCTAT+CGG + chr1_1:67233179-67233198 Msa0038000:five_prime_UTR 30.0%
! TTTCTTACCTTTCTTTTTCC+CGG - chr1_1:67233255-67233274 None:intergenic 30.0%
!!! GTGAATGAAATTGTTTTTGC+TGG + chr1_1:67233347-67233366 Msa0038000:five_prime_UTR 30.0%
! TTTTTGCTGGGAAGAAAAAA+GGG + chr1_1:67233360-67233379 Msa0038000:five_prime_UTR 30.0%
AAAAGGGAAATCGAAAAAAG+TGG + chr1_1:67233376-67233395 Msa0038000:five_prime_UTR 30.0%
TTCATTGAGTAAAGCTATTC+CGG + chr1_1:67233726-67233745 Msa0038000:five_prime_UTR 30.0%
! GATGTTTCTTTTGCATTTAC+TGG + chr1_1:67233811-67233830 Msa0038000:five_prime_UTR 30.0%
ATATTACCATTGTCAACACT+AGG - chr1_1:67233940-67233959 None:intergenic 30.0%
!! GTCTTCGAATCATTTTTCTT+CGG - chr1_1:67234330-67234349 None:intergenic 30.0%
AGGCTGAAGAAAAAAGAAAA+AGG + chr1_1:67234418-67234437 Msa0038000:five_prime_UTR 30.0%
CCTTTCTTTGTCTGATAAAT+AGG - chr1_1:67234701-67234720 None:intergenic 30.0%
CCTATTTATCAGACAAAGAA+AGG + chr1_1:67234698-67234717 Msa0038000:CDS 30.0%
ACAACGAATCGAAATCATAA+TGG + chr1_1:67234725-67234744 Msa0038000:CDS 30.0%
ATGATGTCAATCTGAATGAT+AGG + chr1_1:67234933-67234952 Msa0038000:CDS 30.0%
TGATGTCAATCTGAATGATA+GGG + chr1_1:67234934-67234953 Msa0038000:CDS 30.0%
!!! TCTTTTTTGACAATTGGTTC+AGG - chr1_1:67234992-67235011 None:intergenic 30.0%
AAGTTTCAAGCATAAATGTC+AGG - chr1_1:67235083-67235102 None:intergenic 30.0%
! CTTGATACCATATCAGTTTT+GGG + chr1_1:67235123-67235142 Msa0038000:intron 30.0%
ATATATTTCCTATGCTAGTG+AGG - chr1_1:67235175-67235194 None:intergenic 30.0%
TTGTAACCTAATAATGTCAC+CGG + chr1_1:67235320-67235339 Msa0038000:intron 30.0%
! ATTTACTAGTTTATTGCAGC+CGG - chr1_1:67235342-67235361 None:intergenic 30.0%
CAGGTCAATCAAACATTATT+AGG - chr1_1:67235596-67235615 None:intergenic 30.0%
AATAATGTTTGATTGACCTG+CGG + chr1_1:67235596-67235615 Msa0038000:intron 30.0%
AGAAACTGAAGATAGAAAAC+AGG + chr1_1:67235789-67235808 Msa0038000:CDS 30.0%
TGGTTGAGGATAAAAAGAAA+AGG + chr1_1:67235821-67235840 Msa0038000:CDS 30.0%
TTCAGAATGAGTTCAATATG+AGG + chr1_1:67236434-67236453 Msa0038000:CDS 30.0%
TCAGAATGAGTTCAATATGA+GGG + chr1_1:67236435-67236454 Msa0038000:CDS 30.0%
AATACAATGCTACACAAAAG+AGG - chr1_1:67236689-67236708 None:intergenic 30.0%
GTGTAGCATTGTATTACAAA+AGG + chr1_1:67236694-67236713 Msa0038000:intron 30.0%
GTAGGCATCTTAAAAAATGT+AGG - chr1_1:67236963-67236982 None:intergenic 30.0%
AGACAAGTTAGACACAATTT+GGG - chr1_1:67237135-67237154 None:intergenic 30.0%
TCATCCAAAGGATGATAATT+TGG + chr1_1:67237170-67237189 Msa0038000:intron 30.0%
! TGAATGCCAAATCTTTGTTT+CGG + chr1_1:67237206-67237225 Msa0038000:intron 30.0%
TAATCTGCTGAATACTTTGT+CGG + chr1_1:67237257-67237276 Msa0038000:intron 30.0%
! GTTTAACTGTTATTTGACTG+TGG + chr1_1:67237474-67237493 Msa0038000:intron 30.0%
AATAACCTTGACTTCCAAAA+CGG - chr1_1:67237511-67237530 None:intergenic 30.0%
TTAATGGTGTTCTTCATGAA+GGG + chr1_1:67237565-67237584 Msa0038000:CDS 30.0%
TAGAAATTTGAATGGGTCAA+TGG + chr1_1:67237816-67237835 Msa0038000:intron 30.0%
AAATAACGTGTTAGAAGCTT+AGG + chr1_1:67237850-67237869 Msa0038000:intron 30.0%
!! CAACTATACTTGCTATAACT+TGG - chr1_1:67237907-67237926 None:intergenic 30.0%
CATATTCCAAATTCCAATGA+TGG - chr1_1:67237971-67237990 None:intergenic 30.0%
! TTTGGAATATGTCAATTGAG+GGG + chr1_1:67237980-67237999 Msa0038000:intron 30.0%
AAATATAGCTCCTCTGTTAA+AGG - chr1_1:67238035-67238054 None:intergenic 30.0%
AGTAATGGTTGTCTAATTTC+AGG + chr1_1:67238080-67238099 Msa0038000:intron 30.0%
GTAATGGTTGTCTAATTTCA+GGG + chr1_1:67238081-67238100 Msa0038000:intron 30.0%
AAAGAAATCAAAGCTGCTAT+GGG + chr1_1:67238120-67238139 Msa0038000:CDS 30.0%
GATCAATATCATTAAGTACC+TGG - chr1_1:67238161-67238180 None:intergenic 30.0%
TATGCCAGTCTATATAACTA+TGG + chr1_1:67238188-67238207 Msa0038000:intron 30.0%
!! ATGATTTCTTGCTATTTCAG+GGG + chr1_1:67238259-67238278 Msa0038000:intron 30.0%
!! TTTCTTTTCAAGCATTACAC+TGG - chr1_1:67238541-67238560 None:intergenic 30.0%
! GGGTGTGAAAATTTTTATAG+CGG + chr1_1:67238632-67238651 Msa0038000:CDS 30.0%
! TGATCAATTTAAGGCTTACA+TGG + chr1_1:67238674-67238693 Msa0038000:CDS 30.0%
TTCTTGTTGAAGACACAATT+TGG - chr1_1:67238771-67238790 None:intergenic 30.0%
AAATTGTGTCTTCAACAAGA+AGG + chr1_1:67238770-67238789 Msa0038000:CDS 30.0%
ATATCAACTCCCAAAACAAT+CGG - chr1_1:67238798-67238817 None:intergenic 30.0%
!!! TATCCTTGAAGGCATTTTAA+AGG + chr1_1:67238815-67238834 Msa0038000:CDS 30.0%
!! ATACCTTTAAAATGCCTTCA+AGG - chr1_1:67238821-67238840 None:intergenic 30.0%
CTTGCATCTGTATTTGAAAA+AGG + chr1_1:67238968-67238987 Msa0038000:intron 30.0%
! TGTTCAATGCACAATTTGTT+TGG + chr1_1:67239182-67239201 Msa0038000:intron 30.0%
TCTGTCAAGTAGACAATATT+AGG - chr1_1:67239224-67239243 None:intergenic 30.0%
ATATTGTCTACTTGACAGAT+TGG + chr1_1:67239225-67239244 Msa0038000:intron 30.0%
ACCAATATCAATGAACTCTT+GGG - chr1_1:67239271-67239290 None:intergenic 30.0%
TTTATGGTTATTCTCAATGG+AGG - chr1_1:67239301-67239320 None:intergenic 30.0%
CATTGAGAATAACCATAAAC+CGG + chr1_1:67239302-67239321 Msa0038000:CDS 30.0%
AATTCAAGCACATACCTTAA+TGG - chr1_1:67239358-67239377 None:intergenic 30.0%
ATCTCAAACTTCGTTTAATG+GGG - chr1_1:67239426-67239445 None:intergenic 30.0%
!!! ATCCATTTTCACTGATTTAC+AGG + chr1_1:67239581-67239600 Msa0038000:intron 30.0%
AACTTGTAAGCCATATTTCA+CGG + chr1_1:67239762-67239781 Msa0038000:intron 30.0%
!!! ACGGTAACAGTACAATTTTT+TGG + chr1_1:67239946-67239965 Msa0038000:intron 30.0%
! TGGTTATGCTTTGCATTTTT+CGG - chr1_1:67240145-67240164 None:intergenic 30.0%
ACATATACCACACCTTTATA+CGG - chr1_1:67240363-67240382 None:intergenic 30.0%
! AAGGTTTTCAGTGAAATGTT+CGG + chr1_1:67240597-67240616 Msa0038000:three_prime_UTR 30.0%
TGATTTACTATACACATCTG+TGG + chr1_1:67240802-67240821 Msa0038000:three_prime_UTR 30.0%
TGAGAGAAAGCAAATATTCA+CGG + chr1_1:67240867-67240886 Msa0038000:three_prime_UTR 30.0%
GAACACCAAATGTATACAAA+TGG - chr1_1:67240943-67240962 None:intergenic 30.0%
!!! ATGCTTTGCATTTTGGTTTT+GGG + chr1_1:67240964-67240983 Msa0038000:three_prime_UTR 30.0%
ACAGTGTGTGACATTATGTA+CGG + chr1_1:67232698-67232717 Msa0038000:intron 35.0%
ACTTGTGTGACATTATGTCA+CGG - chr1_1:67232827-67232846 None:intergenic 35.0%
TTTCAATGTAACAGCGAAAG+AGG - chr1_1:67232984-67233003 None:intergenic 35.0%
CTTCCCCATTTATGAGATTA+GGG - chr1_1:67233078-67233097 None:intergenic 35.0%
TCTTCCCCATTTATGAGATT+AGG - chr1_1:67233079-67233098 None:intergenic 35.0%
AAAATCAAAGAAGAAGGCTC+CGG + chr1_1:67233151-67233170 Msa0038000:five_prime_UTR 35.0%
TATTCATCGTCATCGATAAC+CGG - chr1_1:67233173-67233192 None:intergenic 35.0%
! TTCTTACCTTTCTTTTTCCC+GGG - chr1_1:67233254-67233273 None:intergenic 35.0%
GGGAAAAAGAAAGGTAAGAA+AGG + chr1_1:67233254-67233273 Msa0038000:five_prime_UTR 35.0%
! GTTTTTGCTGGGAAGAAAAA+AGG + chr1_1:67233359-67233378 Msa0038000:five_prime_UTR 35.0%
GCATTAGATGAGAATGATGA+TGG + chr1_1:67233598-67233617 Msa0038000:five_prime_UTR 35.0%
AGAGGAGAGTAAGAATGAAA+AGG + chr1_1:67233624-67233643 Msa0038000:five_prime_UTR 35.0%
TGATGAACCAATCACTTTCT+CGG + chr1_1:67233660-67233679 Msa0038000:five_prime_UTR 35.0%
TGAGTGATGAAATCGAGTTT+GGG + chr1_1:67233881-67233900 Msa0038000:five_prime_UTR 35.0%
! GAGTGAAAGTGTAAATGTTG+TGG + chr1_1:67233903-67233922 Msa0038000:five_prime_UTR 35.0%
! TGAAAGTGTAAATGTTGTGG+AGG + chr1_1:67233906-67233925 Msa0038000:five_prime_UTR 35.0%
GGAAAAAGAAAAGGAGAAGA+AGG + chr1_1:67234236-67234255 Msa0038000:five_prime_UTR 35.0%
TCTTCTACAGCTTCAATTAC+CGG - chr1_1:67234288-67234307 None:intergenic 35.0%
AAATGATTCGAAGACCAAAG+CGG + chr1_1:67234335-67234354 Msa0038000:five_prime_UTR 35.0%
CAGGAAGGTAAATTGTTAAC+TGG + chr1_1:67234566-67234585 Msa0038000:five_prime_UTR 35.0%
!! AGATGAAAGTGTTGAAGCAA+CGG + chr1_1:67234766-67234785 Msa0038000:CDS 35.0%
!! TACTGCTGATTTAGATTCAG+AGG + chr1_1:67234793-67234812 Msa0038000:CDS 35.0%
ACTACTTCTTCAACAACTTC+AGG - chr1_1:67234866-67234885 None:intergenic 35.0%
TGAAGTTGTTGAAGAAGTAG+TGG + chr1_1:67234865-67234884 Msa0038000:CDS 35.0%
! ATGATGATGTTGAGGATGAA+TGG + chr1_1:67234894-67234913 Msa0038000:CDS 35.0%
! TGATGATGTTGAGGATGAAT+GGG + chr1_1:67234895-67234914 Msa0038000:CDS 35.0%
GATGTCAATCTGAATGATAG+GGG + chr1_1:67234935-67234954 Msa0038000:CDS 35.0%
!! AACTCACCAGCATTTTTAGA+AGG - chr1_1:67235031-67235050 None:intergenic 35.0%
! TGGTGAGTTTTGCATTCTAT+TGG + chr1_1:67235042-67235061 Msa0038000:intron 35.0%
! GCTTGATACCATATCAGTTT+TGG + chr1_1:67235122-67235141 Msa0038000:intron 35.0%
AATAGGACCCAAAACTGATA+TGG - chr1_1:67235133-67235152 None:intergenic 35.0%
CGAAAAAACCAAGAAGCAAT+AGG - chr1_1:67235150-67235169 None:intergenic 35.0%
TGGTTTCAAACCTGGAATTA+TGG + chr1_1:67235400-67235419 Msa0038000:intron 35.0%
TTTATCACTGCCATAATTCC+AGG - chr1_1:67235413-67235432 None:intergenic 35.0%
! TGGCAGTGATAAAATTTTCC+TGG + chr1_1:67235420-67235439 Msa0038000:intron 35.0%
!! AGTGTTGGCAAATATAAACC+AGG - chr1_1:67235441-67235460 None:intergenic 35.0%
ATACAGGGAGATCTAATACT+TGG - chr1_1:67235535-67235554 None:intergenic 35.0%
ACTTGACACAGACAAAAGTT+TGG - chr1_1:67235571-67235590 None:intergenic 35.0%
! AAACTTTTGTCTGTGTCAAG+TGG + chr1_1:67235570-67235589 Msa0038000:intron 35.0%
TTTATCCTCAACCACAACTT+TGG - chr1_1:67235815-67235834 None:intergenic 35.0%
ACGAGTCATTCAATAACTTG+AGG + chr1_1:67236118-67236137 Msa0038000:CDS 35.0%
CATTCAATAACTTGAGGTCT+CGG + chr1_1:67236124-67236143 Msa0038000:CDS 35.0%
ATTCAATAACTTGAGGTCTC+GGG + chr1_1:67236125-67236144 Msa0038000:CDS 35.0%
!! TGATATTGCAATTTTGGTCG+TGG + chr1_1:67236161-67236180 Msa0038000:CDS 35.0%
TTGAGTGACTCTATAGTTTG+TGG - chr1_1:67236207-67236226 None:intergenic 35.0%
! TGTGTCATTGCTTTACGAAT+TGG - chr1_1:67236400-67236419 None:intergenic 35.0%
AGTTACCTTATTGCACTTGT+AGG - chr1_1:67236644-67236663 None:intergenic 35.0%
!! AAAGAGGTATTATGGCTACA+AGG - chr1_1:67236673-67236692 None:intergenic 35.0%
!! GCTACACAAAAGAGGTATTA+TGG - chr1_1:67236681-67236700 None:intergenic 35.0%
ACCATATTGATGTTCCAGAT+GGG + chr1_1:67236751-67236770 Msa0038000:intron 35.0%
TTCATGTGACTAAAAAGCTG+TGG - chr1_1:67236809-67236828 None:intergenic 35.0%
TACATATGTAATCGCCTCAA+CGG - chr1_1:67236844-67236863 None:intergenic 35.0%
ACAATTCAACATCCTAGCAT+TGG - chr1_1:67236880-67236899 None:intergenic 35.0%
ACAAGTTAGACACAATTTGG+GGG - chr1_1:67237133-67237152 None:intergenic 35.0%
GACAAGTTAGACACAATTTG+GGG - chr1_1:67237134-67237153 None:intergenic 35.0%
CAGACAAGTTAGACACAATT+TGG - chr1_1:67237136-67237155 None:intergenic 35.0%
CCTACCAAATTATCATCCTT+TGG - chr1_1:67237177-67237196 None:intergenic 35.0%
CCAAAGGATGATAATTTGGT+AGG + chr1_1:67237174-67237193 Msa0038000:intron 35.0%
! GAATGCCAAATCTTTGTTTC+GGG + chr1_1:67237207-67237226 Msa0038000:intron 35.0%
! TTTTGCCCGAAACAAAGATT+TGG - chr1_1:67237215-67237234 None:intergenic 35.0%
TTGGAAGTCAAGGTTATTGA+AGG + chr1_1:67237513-67237532 Msa0038000:CDS 35.0%
CAACATCAATAGTAGTTCCA+TGG - chr1_1:67237539-67237558 None:intergenic 35.0%
GTTAATGGTGTTCTTCATGA+AGG + chr1_1:67237564-67237583 Msa0038000:CDS 35.0%
TAATGGTGTTCTTCATGAAG+GGG + chr1_1:67237566-67237585 Msa0038000:CDS 35.0%
! AATAGTTGTATCTGGAATGC+AGG + chr1_1:67237593-67237612 Msa0038000:intron 35.0%
TGTCAATAAAGCTCGAATTG+TGG - chr1_1:67237704-67237723 None:intergenic 35.0%
TTAACACGAAGTTCCTTCAT+TGG - chr1_1:67237733-67237752 None:intergenic 35.0%
AATGAAGGAACTTCGTGTTA+AGG + chr1_1:67237732-67237751 Msa0038000:CDS 35.0%
!!! ATTTTAAAGCTGGTTTGGGT+AGG + chr1_1:67237782-67237801 Msa0038000:intron 35.0%
AAATTTGAATGGGTCAATGG+AGG + chr1_1:67237819-67237838 Msa0038000:intron 35.0%
CTCATATTGTTATGCTGAAG+AGG + chr1_1:67237934-67237953 Msa0038000:intron 35.0%
ATATTGTTATGCTGAAGAGG+TGG + chr1_1:67237937-67237956 Msa0038000:intron 35.0%
AATATGTCAATTGAGGGGAT+GGG + chr1_1:67237985-67238004 Msa0038000:intron 35.0%
AAACATCCTCTTTAGTCTGA+GGG + chr1_1:67238008-67238027 Msa0038000:intron 35.0%
TATGTCTTCCAGCTAAGTAA+TGG + chr1_1:67238065-67238084 Msa0038000:intron 35.0%
TTAGACAACCATTACTTAGC+TGG - chr1_1:67238076-67238095 None:intergenic 35.0%
! CAGCTTTGATTTCTTTGTGA+TGG - chr1_1:67238116-67238135 None:intergenic 35.0%
CAAAGAAATCAAAGCTGCTA+TGG + chr1_1:67238119-67238138 Msa0038000:CDS 35.0%
CTAACAGGAATATTCACTTC+TGG - chr1_1:67238474-67238493 None:intergenic 35.0%
CCTATGTTTATAGCACTAAC+AGG - chr1_1:67238489-67238508 None:intergenic 35.0%
CCTGTTAGTGCTATAAACAT+AGG + chr1_1:67238486-67238505 Msa0038000:CDS 35.0%
! ACGAGAGTATGCTACTATAT+TGG + chr1_1:67238560-67238579 Msa0038000:CDS 35.0%
TTACATGGACAACATTAAGG+AGG + chr1_1:67238689-67238708 Msa0038000:CDS 35.0%
GGAGAAAAAGAAAGAATCTG+CGG + chr1_1:67238710-67238729 Msa0038000:CDS 35.0%
GTAAGATCTTCAGAACACAT+GGG - chr1_1:67238749-67238768 None:intergenic 35.0%
! AAGAAGGATCCGATTGTTTT+GGG + chr1_1:67238786-67238805 Msa0038000:CDS 35.0%
! CAGATGAACTTGTTTCAATG+TGG + chr1_1:67238855-67238874 Msa0038000:intron 35.0%
TAAGATTGTATTGCTTGCCT+TGG + chr1_1:67238913-67238932 Msa0038000:intron 35.0%
TATGGCCTATGGATAAGTTT+AGG + chr1_1:67239009-67239028 Msa0038000:intron 35.0%
TGTGCATTGAACACATAACA+GGG - chr1_1:67239175-67239194 None:intergenic 35.0%
TTGTGCATTGAACACATAAC+AGG - chr1_1:67239176-67239195 None:intergenic 35.0%
TATCAATGAACTCTTGGGAA+GGG - chr1_1:67239266-67239285 None:intergenic 35.0%
ATATCAATGAACTCTTGGGA+AGG - chr1_1:67239267-67239286 None:intergenic 35.0%
TCCCAAGAGTTCATTGATAT+TGG + chr1_1:67239267-67239286 Msa0038000:CDS 35.0%
GACCAATATCAATGAACTCT+TGG - chr1_1:67239272-67239291 None:intergenic 35.0%
CGGTTTATGGTTATTCTCAA+TGG - chr1_1:67239304-67239323 None:intergenic 35.0%
!! AACTAACTTGTTTACACCGA+TGG + chr1_1:67239549-67239568 Msa0038000:intron 35.0%
!!! AATGGATGTCACTTTTCCAT+CGG - chr1_1:67239568-67239587 None:intergenic 35.0%
CACCTGTAAATCAGTGAAAA+TGG - chr1_1:67239586-67239605 None:intergenic 35.0%
!!! CATTTTCACTGATTTACAGG+TGG + chr1_1:67239584-67239603 Msa0038000:intron 35.0%
GAAGAACAGCAGAAAATGTT+CGG + chr1_1:67239716-67239735 Msa0038000:CDS 35.0%
AAGAACAGCAGAAAATGTTC+GGG + chr1_1:67239717-67239736 Msa0038000:CDS 35.0%
CAATAGATCTCCGTGAAATA+TGG - chr1_1:67239775-67239794 None:intergenic 35.0%
GTGTTGAGTTATCATTACTC+TGG - chr1_1:67239878-67239897 None:intergenic 35.0%
CCTTAATGCAGTAGTGAAAT+TGG - chr1_1:67240056-67240075 None:intergenic 35.0%
CCAATTTCACTACTGCATTA+AGG + chr1_1:67240053-67240072 Msa0038000:intron 35.0%
TCGGGTTAATATAGTCAAAG+TGG - chr1_1:67240126-67240145 None:intergenic 35.0%
! GGTTATGCTTTGCATTTTTC+GGG - chr1_1:67240144-67240163 None:intergenic 35.0%
TGAAATGTTCGGTATAATGC+CGG + chr1_1:67240608-67240627 Msa0038000:three_prime_UTR 35.0%
ATACACATCTGTGGTATACA+TGG + chr1_1:67240811-67240830 Msa0038000:three_prime_UTR 35.0%
GAGAGAAAGCAAATATTCAC+GGG + chr1_1:67240868-67240887 Msa0038000:three_prime_UTR 35.0%
CAAAACCAAAATGCAAAGCA+TGG - chr1_1:67240965-67240984 None:intergenic 35.0%
!!! CATGCTTTGCATTTTGGTTT+TGG + chr1_1:67240963-67240982 Msa0038000:three_prime_UTR 35.0%
!!! TTGCATTTTGGTTTTGGGAA+CGG + chr1_1:67240969-67240988 Msa0038000:three_prime_UTR 35.0%
! TGCAGCATATACTTTTCACA+TGG + chr1_1:67241039-67241058 Msa0038000:three_prime_UTR 35.0%
ATTGGACGATTTCTGTTCAA+AGG - chr1_1:67241111-67241130 None:intergenic 35.0%
TATCAGGACATTGTCATCAT+TGG - chr1_1:67241129-67241148 None:intergenic 35.0%
CACAACACACATTGTACATC+TGG + chr1_1:67232735-67232754 Msa0038000:intron 40.0%
GATGTGTTGTATGTGTTGTG+TGG - chr1_1:67232762-67232781 None:intergenic 40.0%
CACACAAAGTGATGTGTTGT+TGG - chr1_1:67232787-67232806 None:intergenic 40.0%
GTCACGGTGACATTAAATCT+AGG - chr1_1:67232811-67232830 None:intergenic 40.0%
ATAACGCAAACCAAGTCGAT+TGG - chr1_1:67232850-67232869 None:intergenic 40.0%
CGGTGGAAAATCAAAGAAGA+AGG + chr1_1:67233145-67233164 Msa0038000:five_prime_UTR 40.0%
CGATGAATATTCTATCGGAG+TGG + chr1_1:67233184-67233203 Msa0038000:five_prime_UTR 40.0%
TGAATATTCTATCGGAGTGG+AGG + chr1_1:67233187-67233206 Msa0038000:five_prime_UTR 40.0%
AGGGAAATCGAAAAAAGTGG+TGG + chr1_1:67233379-67233398 Msa0038000:five_prime_UTR 40.0%
GAAATCGAAAAAAGTGGTGG+TGG + chr1_1:67233382-67233401 Msa0038000:five_prime_UTR 40.0%
AGTGTGTTTGCTTCTGGATT+TGG + chr1_1:67233418-67233437 Msa0038000:five_prime_UTR 40.0%
! TGATGATGAAGAGAAATCGG+AGG + chr1_1:67233471-67233490 Msa0038000:five_prime_UTR 40.0%
!! AACCGGTTGTTAGCTTTACA+GGG + chr1_1:67233524-67233543 Msa0038000:five_prime_UTR 40.0%
TTCCCTGTAAAGCTAACAAC+CGG - chr1_1:67233529-67233548 None:intergenic 40.0%
!! TGAGAATGATGATGGAGAAG+AGG + chr1_1:67233606-67233625 Msa0038000:five_prime_UTR 40.0%
GATGAACCAATCACTTTCTC+GGG + chr1_1:67233661-67233680 Msa0038000:five_prime_UTR 40.0%
TTCTTACCCGAGAAAGTGAT+TGG - chr1_1:67233670-67233689 None:intergenic 40.0%
ATTGAGTAAAGCTATTCCGG+AGG + chr1_1:67233729-67233748 Msa0038000:five_prime_UTR 40.0%
TCTGTATCTGAGTCTGCTAA+AGG + chr1_1:67233763-67233782 Msa0038000:five_prime_UTR 40.0%
! TGGTGATGATGAGAAAGATG+AGG + chr1_1:67233786-67233805 Msa0038000:five_prime_UTR 40.0%
CTCGATTTCATCACTCACTT+TGG - chr1_1:67233878-67233897 None:intergenic 40.0%
GTGAGTGATGAAATCGAGTT+TGG + chr1_1:67233880-67233899 Msa0038000:five_prime_UTR 40.0%
AGAATAAGAAGAAGAGTGGG+AGG + chr1_1:67234004-67234023 Msa0038000:five_prime_UTR 40.0%
TGAACTTTATCATCCTGCTG+AGG - chr1_1:67234114-67234133 None:intergenic 40.0%
!! AGAAAGTGCCAAAGCATGTT+AGG + chr1_1:67234364-67234383 Msa0038000:five_prime_UTR 40.0%
!! GAAAGTGCCAAAGCATGTTA+GGG + chr1_1:67234365-67234384 Msa0038000:five_prime_UTR 40.0%
! ACTACTGGCTAGAAGAAAAG+AGG + chr1_1:67234398-67234417 Msa0038000:five_prime_UTR 40.0%
GAAGCAAAGGAAAGAAGAAG+AGG + chr1_1:67234451-67234470 Msa0038000:five_prime_UTR 40.0%
AGAGGCTAAACGTAGAAAGA+AGG + chr1_1:67234511-67234530 Msa0038000:five_prime_UTR 40.0%
GAAACTCCTGAAAAAGAAGC+AGG + chr1_1:67234547-67234566 Msa0038000:five_prime_UTR 40.0%
! TACCTTCCTGCTTCTTTTTC+AGG - chr1_1:67234556-67234575 None:intergenic 40.0%
AGATTCAGAGGAACCTGAAA+AGG + chr1_1:67234805-67234824 Msa0038000:CDS 40.0%
ACCTGAAAAGGTTGAAGAAG+TGG + chr1_1:67234817-67234836 Msa0038000:CDS 40.0%
! TCCACTTCTTCAACCTTTTC+AGG - chr1_1:67234821-67234840 None:intergenic 40.0%
AAAGGTTGAAGAAGTGGAGA+TGG + chr1_1:67234823-67234842 Msa0038000:CDS 40.0%
! GGATGAAGATGATGATGTTG+AGG + chr1_1:67234886-67234905 Msa0038000:CDS 40.0%
ATGAATGGGATGCAAAAAGC+TGG + chr1_1:67234909-67234928 Msa0038000:CDS 40.0%
TGAATGGGATGCAAAAAGCT+GGG + chr1_1:67234910-67234929 Msa0038000:CDS 40.0%
! TTTGACAATTGGTTCAGGCT+CGG - chr1_1:67234987-67235006 None:intergenic 40.0%
! GGCATACCTTCTAAAAATGC+TGG + chr1_1:67235022-67235041 Msa0038000:CDS 40.0%
!! TTTTGGGTCCTATTGCTTCT+TGG + chr1_1:67235139-67235158 Msa0038000:intron 40.0%
! TTTTCGTACCTCACTAGCAT+AGG + chr1_1:67235164-67235183 Msa0038000:intron 40.0%
AAACCAATTGCTGCAGTCAA+AGG - chr1_1:67235386-67235405 None:intergenic 40.0%
! CCTATGCTTATCTGAAGCAA+AGG - chr1_1:67235479-67235498 None:intergenic 40.0%
CCTTTGCTTCAGATAAGCAT+AGG + chr1_1:67235476-67235495 Msa0038000:intron 40.0%
TAGATCTCCCTGTATCTTGT+AGG + chr1_1:67235540-67235559 Msa0038000:intron 40.0%
!!! TTTGCTTTTTCTTCCACAGC+AGG + chr1_1:67235730-67235749 Msa0038000:intron 40.0%
TTTATTTGTAGCACCTGCTG+TGG - chr1_1:67235746-67235765 None:intergenic 40.0%
TAGAAAACAGGCCAAAGTTG+TGG + chr1_1:67235801-67235820 Msa0038000:CDS 40.0%
TACCAATGTTCAAGAAGGTG+AGG + chr1_1:67235966-67235985 Msa0038000:CDS 40.0%
GAACATACGTGAAAGAACCA+AGG + chr1_1:67236035-67236054 Msa0038000:CDS 40.0%
GTATCAATAACCAGTAGACC+GGG - chr1_1:67236090-67236109 None:intergenic 40.0%
GGTATCAATAACCAGTAGAC+CGG - chr1_1:67236091-67236110 None:intergenic 40.0%
TATTGAATGACTCGTGTCCT+GGG - chr1_1:67236113-67236132 None:intergenic 40.0%
TTATTGAATGACTCGTGTCC+TGG - chr1_1:67236114-67236133 None:intergenic 40.0%
TTCAATAACTTGAGGTCTCG+GGG + chr1_1:67236126-67236145 Msa0038000:CDS 40.0%
CTAGATTGTCACTCAGTTCA+AGG + chr1_1:67236553-67236572 Msa0038000:intron 40.0%
TCACTCAGTTCAAGGAACAA+GGG + chr1_1:67236561-67236580 Msa0038000:CDS 40.0%
TTGTGCCTACAAGTGCAATA+AGG + chr1_1:67236636-67236655 Msa0038000:CDS 40.0%
!! ATCAATATGGTGGTTGGTAG+GGG - chr1_1:67236742-67236761 None:intergenic 40.0%
! CATCAATATGGTGGTTGGTA+GGG - chr1_1:67236743-67236762 None:intergenic 40.0%
ACATCAATATGGTGGTTGGT+AGG - chr1_1:67236744-67236763 None:intergenic 40.0%
TGGAACATCAATATGGTGGT+TGG - chr1_1:67236748-67236767 None:intergenic 40.0%
! CATCTGGAACATCAATATGG+TGG - chr1_1:67236752-67236771 None:intergenic 40.0%
CACCATATTGATGTTCCAGA+TGG + chr1_1:67236750-67236769 Msa0038000:intron 40.0%
! TCCCATCTGGAACATCAATA+TGG - chr1_1:67236755-67236774 None:intergenic 40.0%
GGAAAACAAAATCTCCCATC+TGG - chr1_1:67236768-67236787 None:intergenic 40.0%
AAAGCTGTGGATTTGAGTCT+TGG - chr1_1:67236796-67236815 None:intergenic 40.0%
! TCTTTTGTAGTGCCAATGCT+AGG + chr1_1:67236865-67236884 Msa0038000:intron 40.0%
!! CAGAACATCTCAGCTTTGTT+TGG + chr1_1:67237104-67237123 Msa0038000:intron 40.0%
CTCTACGTGAAATCATCCAA+AGG + chr1_1:67237158-67237177 Msa0038000:intron 40.0%
TGATAATTTGGTAGGAGCAG+AGG + chr1_1:67237182-67237201 Msa0038000:intron 40.0%
TTCGCTGTATGTAAGCTTCT+CGG - chr1_1:67237379-67237398 None:intergenic 40.0%
ACCACTTCAACATCAAGTGA+TGG - chr1_1:67237416-67237435 None:intergenic 40.0%
GGGGATCAAATAGTTGTATC+TGG + chr1_1:67237585-67237604 Msa0038000:intron 40.0%
GCTCGAATTGTGGTAACAAT+TGG - chr1_1:67237694-67237713 None:intergenic 40.0%
ATTGACACCTCATCCAATGA+AGG + chr1_1:67237717-67237736 Msa0038000:CDS 40.0%
!!! GGTGGTCATTTTTCCATCAT+TGG + chr1_1:67237955-67237974 Msa0038000:intron 40.0%
GAATATGTCAATTGAGGGGA+TGG + chr1_1:67237984-67238003 Msa0038000:intron 40.0%
GAAACATCCTCTTTAGTCTG+AGG + chr1_1:67238007-67238026 Msa0038000:intron 40.0%
AACATCCTCTTTAGTCTGAG+GGG + chr1_1:67238009-67238028 Msa0038000:intron 40.0%
! TGCTGGAGCTAGTTTATATG+TGG + chr1_1:67238296-67238315 Msa0038000:CDS 40.0%
! GGTAAAGCCTGATGATGATT+TGG + chr1_1:67238317-67238336 Msa0038000:CDS 40.0%
TAATGCTTCCAATGAGCCAA+GGG - chr1_1:67238433-67238452 None:intergenic 40.0%
ATAATGCTTCCAATGAGCCA+AGG - chr1_1:67238434-67238453 None:intergenic 40.0%
!! TGGCTCATTGGAAGCATTAT+TGG + chr1_1:67238434-67238453 Msa0038000:CDS 40.0%
TCACATCCTTCTTGTGTACA+GGG - chr1_1:67238512-67238531 None:intergenic 40.0%
ATCACATCCTTCTTGTGTAC+AGG - chr1_1:67238513-67238532 None:intergenic 40.0%
ACACAAGAAGGATGTGATGA+AGG + chr1_1:67238515-67238534 Msa0038000:CDS 40.0%
TAGGGATCTTGCAGAAGAAT+TGG + chr1_1:67238611-67238630 Msa0038000:CDS 40.0%
AGGGATCTTGCAGAAGAATT+GGG + chr1_1:67238612-67238631 Msa0038000:CDS 40.0%
GGCTTACATGGACAACATTA+AGG + chr1_1:67238686-67238705 Msa0038000:CDS 40.0%
AAAGAAAGAATCTGCGGATG+AGG + chr1_1:67238716-67238735 Msa0038000:CDS 40.0%
GGTAAGATCTTCAGAACACA+TGG - chr1_1:67238750-67238769 None:intergenic 40.0%
! CAAGAAGGATCCGATTGTTT+TGG + chr1_1:67238785-67238804 Msa0038000:CDS 40.0%
!! TTGGGAGTTGATATCCTTGA+AGG + chr1_1:67238804-67238823 Msa0038000:CDS 40.0%
AGCAGCCTAAACTTATCCAT+AGG - chr1_1:67239017-67239036 None:intergenic 40.0%
TCTTGGGAAGGGATACAAAT+TGG - chr1_1:67239255-67239274 None:intergenic 40.0%
! TCGCATAATCAACCGGTTTA+TGG - chr1_1:67239317-67239336 None:intergenic 40.0%
CCTTTCTTCGCATAATCAAC+CGG - chr1_1:67239324-67239343 None:intergenic 40.0%
CGGTTGATTATGCGAAGAAA+GGG + chr1_1:67239322-67239341 Msa0038000:CDS 40.0%
GTACTATGATTGAGCGATGT+TGG + chr1_1:67239468-67239487 Msa0038000:intron 40.0%
ATGATTGAGCGATGTTGGAA+AGG + chr1_1:67239473-67239492 Msa0038000:intron 40.0%
AGGTGGTCTATCTTTAGACT+TGG + chr1_1:67239601-67239620 Msa0038000:intron 40.0%
CAACTTCGTTTGCAGATTGT+TGG + chr1_1:67239683-67239702 Msa0038000:intron 40.0%
TAAGCATGGTGAACAGTCAT+TGG - chr1_1:67239925-67239944 None:intergenic 40.0%
GACTGTTCACCATGCTTATA+CGG + chr1_1:67239927-67239946 Msa0038000:intron 40.0%
GTACTGTTACCGTATAAGCA+TGG - chr1_1:67239939-67239958 None:intergenic 40.0%
AAGTACATGGATTCCGAAAG+TGG + chr1_1:67240196-67240215 Msa0038000:intron 40.0%
GGTTAATGAAGTCGCGAAAT+TGG + chr1_1:67240240-67240259 Msa0038000:intron 40.0%
!!! GGTGAACAGTACCCTTTTTT+GGG - chr1_1:67240342-67240361 None:intergenic 40.0%
GACATAGGATGATCTGACTA+TGG + chr1_1:67240477-67240496 Msa0038000:intron 40.0%
ATAGGATGATCTGACTATGG+AGG + chr1_1:67240480-67240499 Msa0038000:intron 40.0%
ATGATCTGACTATGGAGGAA+TGG + chr1_1:67240485-67240504 Msa0038000:CDS 40.0%
CACAAAAATCCCTCAAAGTC+CGG - chr1_1:67240630-67240649 None:intergenic 40.0%
!! GACTTTGAGGGATTTTTGTG+AGG + chr1_1:67240630-67240649 Msa0038000:three_prime_UTR 40.0%
! ATTTTTGTGAGGATGCGGTT+GGG + chr1_1:67240641-67240660 Msa0038000:three_prime_UTR 40.0%
TCTGCATCATTGCATCTACA+AGG - chr1_1:67240671-67240690 None:intergenic 40.0%
GATGCAATGATGCAGATAGA+AGG + chr1_1:67240675-67240694 Msa0038000:three_prime_UTR 40.0%
GTTTCTTGTACAAGTCACTC+TGG - chr1_1:67240713-67240732 None:intergenic 40.0%
TGCTTTCTCTCATCGAACAA+AGG - chr1_1:67240859-67240878 None:intergenic 40.0%
! GTGTTCCATGCTTTGCATTT+TGG + chr1_1:67240957-67240976 Msa0038000:three_prime_UTR 40.0%
!!! TGCATTTTGGTTTTGGGAAC+GGG + chr1_1:67240970-67240989 Msa0038000:three_prime_UTR 40.0%
CATAGGTATGCATGCTTGTT+TGG + chr1_1:67240993-67241012 Msa0038000:three_prime_UTR 40.0%
CAAGGCAAAGCAACTTGGTT+TGG + chr1_1:67232675-67232694 Msa0038000:intron 45.0%
TCACACAAGTCCAATCGACT+TGG + chr1_1:67232837-67232856 Msa0038000:intron 45.0%
ACGAAAATTGCTTTGTGCGG+CGG - chr1_1:67232952-67232971 None:intergenic 45.0%
ATATTCTATCGGAGTGGAGG+AGG + chr1_1:67233190-67233209 Msa0038000:five_prime_UTR 45.0%
GAGAAACCCGGGAAAAAGAA+AGG + chr1_1:67233245-67233264 Msa0038000:five_prime_UTR 45.0%
!! AAAAGTGGTGGTGGTAGTAG+TGG + chr1_1:67233391-67233410 Msa0038000:five_prime_UTR 45.0%
!! ATTTGGTGTGCTTGGTGATG+AGG + chr1_1:67233435-67233454 Msa0038000:five_prime_UTR 45.0%
GAAGAGAAATCGGAGGTAAC+CGG + chr1_1:67233478-67233497 Msa0038000:five_prime_UTR 45.0%
!! GAACCGGTTGTTAGCTTTAC+AGG + chr1_1:67233523-67233542 Msa0038000:five_prime_UTR 45.0%
AGGGAAGAAGAAATCCTCGA+AGG + chr1_1:67233543-67233562 Msa0038000:five_prime_UTR 45.0%
GGGAAGAAGAAATCCTCGAA+GGG + chr1_1:67233544-67233563 Msa0038000:five_prime_UTR 45.0%
GTCATCAAAGGGTTCGAAGA+AGG + chr1_1:67233696-67233715 Msa0038000:five_prime_UTR 45.0%
ACAGAAACACTATCCTCCTC+CGG - chr1_1:67233748-67233767 None:intergenic 45.0%
GTATCTGAGTCTGCTAAAGG+TGG + chr1_1:67233766-67233785 Msa0038000:five_prime_UTR 45.0%
!! GAGAAGCCTAGTGTTGACAA+TGG + chr1_1:67233931-67233950 Msa0038000:five_prime_UTR 45.0%
AGTAAGAGTGAAGAGGTCGT+TGG + chr1_1:67233961-67233980 Msa0038000:five_prime_UTR 45.0%
ACTTTATCATCCTGCTGAGG+AGG - chr1_1:67234111-67234130 None:intergenic 45.0%
GCAGGATGATAAAGTTCAGC+CGG + chr1_1:67234116-67234135 Msa0038000:five_prime_UTR 45.0%
AGAAAAGGAGAAGAAGGCAG+CGG + chr1_1:67234242-67234261 Msa0038000:five_prime_UTR 45.0%
AGCTGTAGAAGAGAAAGCTG+AGG + chr1_1:67234296-67234315 Msa0038000:five_prime_UTR 45.0%
TGCATCTCCCTAACATGCTT+TGG - chr1_1:67234375-67234394 None:intergenic 45.0%
TAGGGAGATGCAAGAACTAC+TGG + chr1_1:67234383-67234402 Msa0038000:five_prime_UTR 45.0%
AGGAAGAGGAAGAGAAGCAA+AGG + chr1_1:67234438-67234457 Msa0038000:five_prime_UTR 45.0%
GATAGAGGAACTTGAGAGAC+AGG + chr1_1:67234484-67234503 Msa0038000:five_prime_UTR 45.0%
CTCCTGAAAAAGAAGCAGGA+AGG + chr1_1:67234551-67234570 Msa0038000:five_prime_UTR 45.0%
GTAAGCAGAAAGAAGAAGCC+CGG + chr1_1:67234588-67234607 Msa0038000:five_prime_UTR 45.0%
AGGCAGATTCTCAATAGCAC+AGG + chr1_1:67234629-67234648 Msa0038000:CDS 45.0%
GGCAGATTCTCAATAGCACA+GGG + chr1_1:67234630-67234649 Msa0038000:CDS 45.0%
GCAGATTCTCAATAGCACAG+GGG + chr1_1:67234631-67234650 Msa0038000:CDS 45.0%
CAGATTCTCAATAGCACAGG+GGG + chr1_1:67234632-67234651 Msa0038000:CDS 45.0%
TTCATCTGTCTTGACAGCAG+CGG - chr1_1:67234753-67234772 None:intergenic 45.0%
TTGCAGCCGGTGACATTATT+AGG - chr1_1:67235329-67235348 None:intergenic 45.0%
GCTGCAGTCAAAGGAAGAAA+GGG - chr1_1:67235377-67235396 None:intergenic 45.0%
TGCTGCAGTCAAAGGAAGAA+AGG - chr1_1:67235378-67235397 None:intergenic 45.0%
CTTCCTTTGACTGCAGCAAT+TGG + chr1_1:67235380-67235399 Msa0038000:intron 45.0%
! GCAGCAATTGGTTTCAAACC+TGG + chr1_1:67235392-67235411 Msa0038000:intron 45.0%
CAGGGAGATCTAATACTTGG+TGG - chr1_1:67235532-67235551 None:intergenic 45.0%
AACCCCTTCTCTAGTTGGAT+GGG + chr1_1:67235623-67235642 Msa0038000:intron 45.0%
GTTGGATGGGGCATGATATT+TGG + chr1_1:67235636-67235655 Msa0038000:intron 45.0%
TCTTCAGTTTCTTCAGCTGC+AGG - chr1_1:67235781-67235800 None:intergenic 45.0%
!! TCGCCAATTTGCTGCATCAT+GGG + chr1_1:67235898-67235917 Msa0038000:CDS 45.0%
TGACCCATGATGCAGCAAAT+TGG - chr1_1:67235904-67235923 None:intergenic 45.0%
TCGAATGCAATCCAGAAGCT+TGG - chr1_1:67235944-67235963 None:intergenic 45.0%
AAGCTTCTGGATTGCATTCG+AGG + chr1_1:67235943-67235962 Msa0038000:CDS 45.0%
! CGAGGTACCAATGTTCAAGA+AGG + chr1_1:67235961-67235980 Msa0038000:CDS 45.0%
AGCCTCACCTTCTTGAACAT+TGG - chr1_1:67235971-67235990 None:intergenic 45.0%
AATGTTCAAGAAGGTGAGGC+TGG + chr1_1:67235970-67235989 Msa0038000:CDS 45.0%
ATGTTCAAGAAGGTGAGGCT+GGG + chr1_1:67235971-67235990 Msa0038000:CDS 45.0%
GTACGTTGCACCAATCTGTT+GGG - chr1_1:67236004-67236023 None:intergenic 45.0%
AGTACGTTGCACCAATCTGT+TGG - chr1_1:67236005-67236024 None:intergenic 45.0%
CTTTCACGTATGTTCTCAGC+AGG - chr1_1:67236030-67236049 None:intergenic 45.0%
TGCATCAGCTTTCAGTTCCT+TGG - chr1_1:67236055-67236074 None:intergenic 45.0%
GATGCAACACTGAAAGTTCC+CGG + chr1_1:67236069-67236088 Msa0038000:CDS 45.0%
! CTACTGGTTATTGATACCCC+AGG + chr1_1:67236093-67236112 Msa0038000:CDS 45.0%
ATTGAATGACTCGTGTCCTG+GGG - chr1_1:67236112-67236131 None:intergenic 45.0%
TTGGTCGTGGACATTATGCA+TGG + chr1_1:67236174-67236193 Msa0038000:CDS 45.0%
! TTGCAGGTTGACAGGCTTTA+TGG + chr1_1:67236352-67236371 Msa0038000:intron 45.0%
AGCAATGACACAGCAGTCTA+AGG + chr1_1:67236408-67236427 Msa0038000:CDS 45.0%
GTTCAATATGAGGGTCACTC+AGG + chr1_1:67236444-67236463 Msa0038000:CDS 45.0%
GTCACTCAGTTCAAGGAACA+AGG + chr1_1:67236560-67236579 Msa0038000:CDS 45.0%
TTGGTAGGGGTAAAATGGAG+GGG - chr1_1:67236729-67236748 None:intergenic 45.0%
! GTTGGTAGGGGTAAAATGGA+GGG - chr1_1:67236730-67236749 None:intergenic 45.0%
TGGATTTGAGTCTTGGATGC+AGG - chr1_1:67236789-67236808 None:intergenic 45.0%
TTTCAGTGGTGAAGGAATCC+CGG + chr1_1:67237311-67237330 Msa0038000:intron 45.0%
! CTTCTCGGTCATGGTCTTTT+GGG - chr1_1:67237364-67237383 None:intergenic 45.0%
GTATGTAAGCTTCTCGGTCA+TGG - chr1_1:67237373-67237392 None:intergenic 45.0%
! TACATACAGCGAAGAAGTGC+AGG + chr1_1:67237386-67237405 Msa0038000:CDS 45.0%
GCCATCACTTGATGTTGAAG+TGG + chr1_1:67237412-67237431 Msa0038000:intron 45.0%
TGACTTCCAAAACGGTACAC+TGG - chr1_1:67237503-67237522 None:intergenic 45.0%
!!! GTGTACCGTTTTGGAAGTCA+AGG + chr1_1:67237503-67237522 Msa0038000:intron 45.0%
GTCAAGGTTATTGAAGGCCA+TGG + chr1_1:67237519-67237538 Msa0038000:CDS 45.0%
CGAAGTTCCTTCATTGGATG+AGG - chr1_1:67237727-67237746 None:intergenic 45.0%
!! AGCTGGTTTGGGTAGGAAAA+AGG + chr1_1:67237789-67237808 Msa0038000:intron 45.0%
!! GCTGGTTTGGGTAGGAAAAA+GGG + chr1_1:67237790-67237809 Msa0038000:intron 45.0%
TGGATAAGTTTAGGCTGCTG+CGG + chr1_1:67239018-67239037 Msa0038000:intron 45.0%
CCGGTTGATTATGCGAAGAA+AGG + chr1_1:67239321-67239340 Msa0038000:CDS 45.0%
AGGGCAGAAAGTAGCCATTA+AGG + chr1_1:67239341-67239360 Msa0038000:CDS 45.0%
AACAGCAGAAAATGTTCGGG+AGG + chr1_1:67239720-67239739 Msa0038000:CDS 45.0%
! TGTACGCTGTTGACCACTTT+TGG + chr1_1:67240083-67240102 Msa0038000:intron 45.0%
!!! CGGTGAACAGTACCCTTTTT+TGG - chr1_1:67240343-67240362 None:intergenic 45.0%
! GGGTACTGTTCACCGTATAA+AGG + chr1_1:67240348-67240367 Msa0038000:intron 45.0%
CTGTTCACCGTATAAAGGTG+TGG + chr1_1:67240353-67240372 Msa0038000:intron 45.0%
GGTATAATGCCGGACTTTGA+GGG + chr1_1:67240618-67240637 Msa0038000:three_prime_UTR 45.0%
! GAGGGATTTTTGTGAGGATG+CGG + chr1_1:67240636-67240655 Msa0038000:three_prime_UTR 45.0%
! GATTTTTGTGAGGATGCGGT+TGG + chr1_1:67240640-67240659 Msa0038000:three_prime_UTR 45.0%
! GTCCTTGACAGTTACCCTTT+TGG - chr1_1:67240766-67240785 None:intergenic 45.0%
! GTTGCTTTGCCTTGCCTCTA+GGG - chr1_1:67232669-67232688 None:intergenic 50.0%
! AGTTGCTTTGCCTTGCCTCT+AGG - chr1_1:67232670-67232689 None:intergenic 50.0%
AGAGGCAAGGCAAAGCAACT+TGG + chr1_1:67232670-67232689 Msa0038000:five_prime_UTR 50.0%
!! GATTTTCCACCGCCTTGTTG+CGG - chr1_1:67233137-67233156 None:intergenic 50.0%
! GGTGGAAGTGTGTTTGCTTC+TGG + chr1_1:67233412-67233431 Msa0038000:five_prime_UTR 50.0%
!! GCTTCTGGATTTGGTGTGCT+TGG + chr1_1:67233427-67233446 Msa0038000:five_prime_UTR 50.0%
AAATCGGAGGTAACCGGTGA+GGG + chr1_1:67233484-67233503 Msa0038000:five_prime_UTR 50.0%
CGATGACGATGAGGATGAAC+CGG + chr1_1:67233507-67233526 Msa0038000:five_prime_UTR 50.0%
TCCTCGAAGGGTTCGAAGAA+AGG + chr1_1:67233556-67233575 Msa0038000:five_prime_UTR 50.0%
CCTCGAAGGGTTCGAAGAAA+GGG + chr1_1:67233557-67233576 Msa0038000:five_prime_UTR 50.0%
CTCGAAGGGTTCGAAGAAAG+GGG + chr1_1:67233558-67233577 Msa0038000:five_prime_UTR 50.0%
TCGAAGGGTTCGAAGAAAGG+GGG + chr1_1:67233559-67233578 Msa0038000:five_prime_UTR 50.0%
TCAAAGGGTTCGAAGAAGGC+AGG + chr1_1:67233700-67233719 Msa0038000:five_prime_UTR 50.0%
GAGTAAAGCTATTCCGGAGG+AGG + chr1_1:67233732-67233751 Msa0038000:five_prime_UTR 50.0%
GAGTGGGAGGACTAAAGAAG+AGG + chr1_1:67234017-67234036 Msa0038000:five_prime_UTR 50.0%
TGGGAGGACTAAAGAAGAGG+AGG + chr1_1:67234020-67234039 Msa0038000:five_prime_UTR 50.0%
GATAAGCTTCTCGCAGAGCT+TGG + chr1_1:67234051-67234070 Msa0038000:five_prime_UTR 50.0%
GCAGAACCTACTACAGGAAC+CGG - chr1_1:67234138-67234157 None:intergenic 50.0%
!! CTTTTCTCCTGAAGCACCAG+GGG - chr1_1:67234160-67234179 None:intergenic 50.0%
!! CCTTTTCTCCTGAAGCACCA+GGG - chr1_1:67234161-67234180 None:intergenic 50.0%
!! TCCTTTTCTCCTGAAGCACC+AGG - chr1_1:67234162-67234181 None:intergenic 50.0%
TGGTGCTTCAGGAGAAAAGG+AGG + chr1_1:67234161-67234180 Msa0038000:five_prime_UTR 50.0%
GGTGCTTCAGGAGAAAAGGA+GGG + chr1_1:67234162-67234181 Msa0038000:five_prime_UTR 50.0%
CACTTTCTTGTCAGCCGCTT+TGG - chr1_1:67234352-67234371 None:intergenic 50.0%
AAGAAGAAGAGGAGCGACGA+AGG + chr1_1:67234462-67234481 Msa0038000:five_prime_UTR 50.0%
ACTTGAGAGACAGGCAGAAG+AGG + chr1_1:67234493-67234512 Msa0038000:five_prime_UTR 50.0%
GGTTGAAGAAGTGGAGATGG+AGG + chr1_1:67234826-67234845 Msa0038000:CDS 50.0%
CATCCAACTAGAGAAGGGGT+TGG - chr1_1:67235624-67235643 None:intergenic 50.0%
CAACCCCTTCTCTAGTTGGA+TGG + chr1_1:67235622-67235641 Msa0038000:intron 50.0%
ACCCCTTCTCTAGTTGGATG+GGG + chr1_1:67235624-67235643 Msa0038000:intron 50.0%
TGCCCCATCCAACTAGAGAA+GGG - chr1_1:67235629-67235648 None:intergenic 50.0%
ATGCCCCATCCAACTAGAGA+AGG - chr1_1:67235630-67235649 None:intergenic 50.0%
ACAGGCCAAAGTTGTGGTTG+AGG + chr1_1:67235807-67235826 Msa0038000:CDS 50.0%
TTCACTCGGCTTAGAAGGCA+CGG - chr1_1:67235866-67235885 None:intergenic 50.0%
TGCCTTCTAAGCCGAGTGAA+GGG + chr1_1:67235866-67235885 Msa0038000:CDS 50.0%
TTCCCTTCACTCGGCTTAGA+AGG - chr1_1:67235871-67235890 None:intergenic 50.0%
!! GTCGCCAATTTGCTGCATCA+TGG + chr1_1:67235897-67235916 Msa0038000:CDS 50.0%
TTGCTGCATCATGGGTCATG+TGG + chr1_1:67235906-67235925 Msa0038000:CDS 50.0%
ATCATGGGTCATGTGGACAC+TGG + chr1_1:67235913-67235932 Msa0038000:CDS 50.0%
CACTGGCAAAACCAAGCTTC+TGG + chr1_1:67235930-67235949 Msa0038000:CDS 50.0%
TGTTCAAGAAGGTGAGGCTG+GGG + chr1_1:67235972-67235991 Msa0038000:CDS 50.0%
ACTGAAAGTTCCCGGTCTAC+TGG + chr1_1:67236077-67236096 Msa0038000:CDS 50.0%
CACTGTTCTCGCAACATTGC+AGG + chr1_1:67236336-67236355 Msa0038000:intron 50.0%
! TCGCAACATTGCAGGTTGAC+AGG + chr1_1:67236344-67236363 Msa0038000:intron 50.0%
! AGGTTGACAGGCTTTATGGC+TGG + chr1_1:67236356-67236375 Msa0038000:intron 50.0%
!! GGTTGGTAGGGGTAAAATGG+AGG - chr1_1:67236731-67236750 None:intergenic 50.0%
!! GGTGGTTGGTAGGGGTAAAA+TGG - chr1_1:67236734-67236753 None:intergenic 50.0%
AAAACAACCCCAAGCCGTTG+AGG + chr1_1:67236827-67236846 Msa0038000:intron 50.0%
TGTAATCGCCTCAACGGCTT+GGG - chr1_1:67236838-67236857 None:intergenic 50.0%
ATGTAATCGCCTCAACGGCT+TGG - chr1_1:67236839-67236858 None:intergenic 50.0%
! GCTTCTCGGTCATGGTCTTT+TGG - chr1_1:67237365-67237384 None:intergenic 50.0%
! TGGCTACCAGTGTACCGTTT+TGG + chr1_1:67237494-67237513 Msa0038000:intron 50.0%
AAAGGCCCCTCAGACTAAAG+AGG - chr1_1:67238017-67238036 None:intergenic 50.0%
GGGCTTGAACATGCTATTGC+TGG + chr1_1:67238279-67238298 Msa0038000:CDS 50.0%
!! AAAGGCAGCTTTGGAAGACG+TGG + chr1_1:67238350-67238369 Msa0038000:CDS 50.0%
!! AGCTTTGGAAGACGTGGAGT+CGG + chr1_1:67238356-67238375 Msa0038000:CDS 50.0%
TTGAGCAGGATTGACAGGAG+TGG + chr1_1:67238381-67238400 Msa0038000:CDS 50.0%
AGGATTGACAGGAGTGGTGA+GGG + chr1_1:67238387-67238406 Msa0038000:CDS 50.0%
CATAGGCCCTGTACACAAGA+AGG + chr1_1:67238503-67238522 Msa0038000:CDS 50.0%
TCAAAGTCACCCCTGAAGCT+AGG + chr1_1:67238592-67238611 Msa0038000:CDS 50.0%
CAAAGTCACCCCTGAAGCTA+GGG + chr1_1:67238593-67238612 Msa0038000:CDS 50.0%
TGCAAGATCCCTAGCTTCAG+GGG - chr1_1:67238604-67238623 None:intergenic 50.0%
CTGCAAGATCCCTAGCTTCA+GGG - chr1_1:67238605-67238624 None:intergenic 50.0%
TCTGCAAGATCCCTAGCTTC+AGG - chr1_1:67238606-67238625 None:intergenic 50.0%
AGGCTGCTGCGGTTAAAATG+AGG + chr1_1:67239029-67239048 Msa0038000:intron 50.0%
GACTATGGAGGAATGGAAGC+TGG + chr1_1:67240492-67240511 Msa0038000:CDS 50.0%
TATGGAGGAATGGAAGCTGG+TGG + chr1_1:67240495-67240514 Msa0038000:CDS 50.0%
CGGTATAATGCCGGACTTTG+AGG + chr1_1:67240617-67240636 Msa0038000:three_prime_UTR 50.0%
ACTTCTATGCTCCTGCAGCT+TGG + chr1_1:67240731-67240750 Msa0038000:three_prime_UTR 50.0%
CTTGGATCCTCTGGCCAAAA+GGG + chr1_1:67240749-67240768 Msa0038000:three_prime_UTR 50.0%
! ACAGTTACCCTTTTGGCCAG+AGG - chr1_1:67240759-67240778 None:intergenic 50.0%
GGCCAAAAGGGTAACTGTCA+AGG + chr1_1:67240761-67240780 Msa0038000:three_prime_UTR 50.0%
AGGGTAACTGTCAAGGACGA+AGG + chr1_1:67240768-67240787 Msa0038000:three_prime_UTR 50.0%
!!! TTGGTTTTGGGAACGGGCAT+AGG + chr1_1:67240976-67240995 Msa0038000:three_prime_UTR 50.0%
TGCTTTGTGCGGCGGTGAAA+AGG - chr1_1:67232944-67232963 None:intergenic 55.0%
GGTTTCTCTTCCACCGCAAC+CGG - chr1_1:67233233-67233252 None:intergenic 55.0%
GTTGCGGTGGAAGAGAAACC+CGG + chr1_1:67233233-67233252 Msa0038000:five_prime_UTR 55.0%
TTGCGGTGGAAGAGAAACCC+GGG + chr1_1:67233234-67233253 Msa0038000:five_prime_UTR 55.0%
!! AGTGGTGGTGGTAGTAGTGG+TGG + chr1_1:67233394-67233413 Msa0038000:five_prime_UTR 55.0%
GAAATCGGAGGTAACCGGTG+AGG + chr1_1:67233483-67233502 Msa0038000:five_prime_UTR 55.0%
CCCTTTCTTCGAACCCTTCG+AGG - chr1_1:67233560-67233579 None:intergenic 55.0%
AAGGGTTCGAAGAAGGCAGG+TGG + chr1_1:67233703-67233722 Msa0038000:five_prime_UTR 55.0%
AGCAGGTTGTGCTGTAGCAG+GGG - chr1_1:67234082-67234101 None:intergenic 55.0%
CAGCAGGTTGTGCTGTAGCA+GGG - chr1_1:67234083-67234102 None:intergenic 55.0%
TGCTACAGCACAACCTGCTG+CGG + chr1_1:67234083-67234102 Msa0038000:five_prime_UTR 55.0%
! GTTCAGCCGGTTCCTGTAGT+AGG + chr1_1:67234129-67234148 Msa0038000:five_prime_UTR 55.0%
CCCTGGTGCTTCAGGAGAAA+AGG + chr1_1:67234158-67234177 Msa0038000:five_prime_UTR 55.0%
AGAGGAGCGACGAAGGATAG+AGG + chr1_1:67234469-67234488 Msa0038000:five_prime_UTR 55.0%
GAAAGAAGAAGCCCGGCGTT+TGG + chr1_1:67234595-67234614 Msa0038000:five_prime_UTR 55.0%
TCCTCATTGCCTCCAAACGC+CGG - chr1_1:67234610-67234629 None:intergenic 55.0%
CTCCCTGTATCTTGTAGGCG+TGG + chr1_1:67235545-67235564 Msa0038000:intron 55.0%
GGCCACGCCTACAAGATACA+GGG - chr1_1:67235550-67235569 None:intergenic 55.0%
TGGCCACGCCTACAAGATAC+AGG - chr1_1:67235551-67235570 None:intergenic 55.0%
GAGCCAACCCCTTCTCTAGT+TGG + chr1_1:67235618-67235637 Msa0038000:intron 55.0%
GCCCCATCCAACTAGAGAAG+GGG - chr1_1:67235628-67235647 None:intergenic 55.0%
TCAGCTGCAGGCTTCGTAAC+AGG - chr1_1:67235769-67235788 None:intergenic 55.0%
GTGCCTTCTAAGCCGAGTGA+AGG + chr1_1:67235865-67235884 Msa0038000:CDS 55.0%
AGCCGAGTGAAGGGAACCTT+CGG + chr1_1:67235875-67235894 Msa0038000:CDS 55.0%
GACCGAAGGTTCCCTTCACT+CGG - chr1_1:67235880-67235899 None:intergenic 55.0%
TGCAGCAAATTGGCGACCGA+AGG - chr1_1:67235894-67235913 None:intergenic 55.0%
GTTCAAGAAGGTGAGGCTGG+GGG + chr1_1:67235973-67235992 Msa0038000:CDS 55.0%
!! GGGGGTATCACCCAACAGAT+TGG + chr1_1:67235991-67236010 Msa0038000:CDS 55.0%
AACTTGAGGTCTCGGGGTTC+AGG + chr1_1:67236132-67236151 Msa0038000:CDS 55.0%
GTAATCGCCTCAACGGCTTG+GGG - chr1_1:67236837-67236856 None:intergenic 55.0%
GTCTGAGGGGCCTTTAACAG+AGG + chr1_1:67238022-67238041 Msa0038000:intron 55.0%
GGGAATCAAGATCACTGCCC+AGG + chr1_1:67238140-67238159 Msa0038000:CDS 55.0%
CGGTCTTGAGCAGGATTGAC+AGG + chr1_1:67238376-67238395 Msa0038000:CDS 55.0%
CAGGATTGACAGGAGTGGTG+AGG + chr1_1:67238386-67238405 Msa0038000:CDS 55.0%
TGTGTCCAGGCATCTACCCT+TGG + chr1_1:67238414-67238433 Msa0038000:CDS 55.0%
ATGAGCCAAGGGTAGATGCC+TGG - chr1_1:67238422-67238441 None:intergenic 55.0%
GGCATCTACCCTTGGCTCAT+TGG + chr1_1:67238422-67238441 Msa0038000:CDS 55.0%
GCTTGGATCCTCTGGCCAAA+AGG + chr1_1:67240748-67240767 Msa0038000:three_prime_UTR 55.0%
CGTCTGTGTAGTGTGAGAGC+TGG + chr1_1:67241076-67241095 Msa0038000:three_prime_UTR 55.0%
! TTCTCGTCGTCGCGGATTGC+TGG - chr1_1:67233107-67233126 None:intergenic 60.0%
GAGAATCCTCCGCCGCAACA+AGG + chr1_1:67233122-67233141 Msa0038000:five_prime_UTR 60.0%
AATCCTCCGCCGCAACAAGG+CGG + chr1_1:67233125-67233144 Msa0038000:five_prime_UTR 60.0%
! TTTCCACCGCCTTGTTGCGG+CGG - chr1_1:67233134-67233153 None:intergenic 60.0%
!! GGAGGAGGTGTCAGAGGATG+CGG + chr1_1:67233205-67233224 Msa0038000:five_prime_UTR 60.0%
CTCATCGTCATCGCCCTCAC+CGG - chr1_1:67233500-67233519 None:intergenic 60.0%
GCAGCAGGTTGTGCTGTAGC+AGG - chr1_1:67234084-67234103 None:intergenic 60.0%
CCAGGGGCAGAACCTACTAC+AGG - chr1_1:67234144-67234163 None:intergenic 60.0%
CCTGTAGTAGGTTCTGCCCC+TGG + chr1_1:67234141-67234160 Msa0038000:five_prime_UTR 60.0%
! AGCAGCAGCTGGAAGTGCAC+CGG + chr1_1:67234266-67234285 Msa0038000:five_prime_UTR 60.0%
AGAAGAAGCCCGGCGTTTGG+AGG + chr1_1:67234598-67234617 Msa0038000:five_prime_UTR 60.0%
CCTCATTGCCTCCAAACGCC+GGG - chr1_1:67234609-67234628 None:intergenic 60.0%
GGCGTTTGGAGGCAATGAGG+AGG + chr1_1:67234609-67234628 Msa0038000:exon 60.0%
! ACAGGGGGCATGACTCTTCC+TGG + chr1_1:67234647-67234666 Msa0038000:CDS 60.0%
! GAAGGCACGGCAGACAGTTG+TGG - chr1_1:67235853-67235872 None:intergenic 60.0%
ACGTGGAGTCGGTCTTGAGC+AGG + chr1_1:67238367-67238386 Msa0038000:CDS 60.0%
!! TGGTGAGGGCGTTTGTGTCC+AGG + chr1_1:67238401-67238420 Msa0038000:CDS 60.0%
CTCCTGCAGCTTGGATCCTC+TGG + chr1_1:67240740-67240759 Msa0038000:three_prime_UTR 60.0%
GCGGAGGATTCTCGTCGTCG+CGG - chr1_1:67233115-67233134 None:intergenic 65.0%
!! CGGAGTGGAGGAGGTGTCAG+AGG + chr1_1:67233199-67233218 Msa0038000:five_prime_UTR 65.0%
GGTGTCAGAGGATGCGGCTC+CGG + chr1_1:67233211-67233230 Msa0038000:five_prime_UTR 65.0%
AGAGGATGCGGCTCCGGTTG+CGG + chr1_1:67233217-67233236 Msa0038000:five_prime_UTR 65.0%
CGGTGAGGGCGATGACGATG+AGG + chr1_1:67233498-67233517 Msa0038000:five_prime_UTR 65.0%
GGTTCTGCCCCTGGTGCTTC+AGG + chr1_1:67234150-67234169 Msa0038000:five_prime_UTR 65.0%
CCCGGCGTTTGGAGGCAATG+AGG + chr1_1:67234606-67234625 Msa0038000:exon 65.0%
GGGCATGACTCTTCCTGGCG+CGG + chr1_1:67234652-67234671 Msa0038000:CDS 65.0%
ACTCTTCCTGGCGCGGACAC+TGG + chr1_1:67234659-67234678 Msa0038000:CDS 65.0%
!! AGAGAAGGGGTTGGCTCCGC+AGG - chr1_1:67235615-67235634 None:intergenic 65.0%
GGCCAGAGGATCCAAGCTGC+AGG - chr1_1:67240745-67240764 None:intergenic 65.0%
TGCTGAGGAGGAGCCGCAGC+AGG - chr1_1:67234099-67234118 None:intergenic 70.0%
TGCTGCGGCTCCTCCTCAGC+AGG + chr1_1:67234098-67234117 Msa0038000:five_prime_UTR 70.0%
AAGGCAGCGGCAGCAGCAGC+TGG + chr1_1:67234255-67234274 Msa0038000:five_prime_UTR 70.0%
CTTCCTGGCGCGGACACTGG+TGG + chr1_1:67234662-67234681 Msa0038000:CDS 70.0%
! CCACCGCCTTGTTGCGGCGG+AGG - chr1_1:67233131-67233150 None:intergenic 75.0%
CCTCCGCCGCAACAAGGCGG+TGG + chr1_1:67233128-67233147 Msa0038000:five_prime_UTR 75.0%
GGATGCGGCTCCGGTTGCGG+TGG + chr1_1:67233220-67233239 Msa0038000:five_prime_UTR 75.0%
GGTCCACCAGTGTCCGCGCC+AGG - chr1_1:67234668-67234687 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 67232662 67241185 67232662 ID=Msa0038000;Name=Msa0038000
chr1_1 mRNA 67232662 67241185 67232662 ID=Msa0038000-mRNA-1;Parent=Msa0038000;Name=Msa0038000-mRNA-1;_AED=0.07;_eAED=0.07;_QI=1794|0.83|0.84|1|0.91|0.84|13|636|759
chr1_1 exon 67232662 67232691 67232662 ID=Msa0038000-mRNA-1:exon:21804;Parent=Msa0038000-mRNA-1
chr1_1 exon 67232859 67235043 67232859 ID=Msa0038000-mRNA-1:exon:21805;Parent=Msa0038000-mRNA-1
chr1_1 exon 67235749 67236272 67235749 ID=Msa0038000-mRNA-1:exon:21806;Parent=Msa0038000-mRNA-1
chr1_1 exon 67236358 67236465 67236358 ID=Msa0038000-mRNA-1:exon:21807;Parent=Msa0038000-mRNA-1
chr1_1 exon 67236557 67236657 67236557 ID=Msa0038000-mRNA-1:exon:21808;Parent=Msa0038000-mRNA-1
chr1_1 exon 67237317 67237407 67237317 ID=Msa0038000-mRNA-1:exon:21809;Parent=Msa0038000-mRNA-1
chr1_1 exon 67237504 67237599 67237504 ID=Msa0038000-mRNA-1:exon:21810;Parent=Msa0038000-mRNA-1
chr1_1 exon 67237688 67237753 67237688 ID=Msa0038000-mRNA-1:exon:21811;Parent=Msa0038000-mRNA-1
chr1_1 exon 67238102 67238161 67238102 ID=Msa0038000-mRNA-1:exon:21812;Parent=Msa0038000-mRNA-1
chr1_1 exon 67238279 67238836 67238279 ID=Msa0038000-mRNA-1:exon:21813;Parent=Msa0038000-mRNA-1
chr1_1 exon 67239243 67239362 67239243 ID=Msa0038000-mRNA-1:exon:21814;Parent=Msa0038000-mRNA-1
chr1_1 exon 67239698 67239766 67239698 ID=Msa0038000-mRNA-1:exon:21815;Parent=Msa0038000-mRNA-1
chr1_1 exon 67240484 67241185 67240484 ID=Msa0038000-mRNA-1:exon:21816;Parent=Msa0038000-mRNA-1
chr1_1 five_prime_UTR 67232662 67232691 67232662 ID=Msa0038000-mRNA-1:five_prime_utr;Parent=Msa0038000-mRNA-1
chr1_1 five_prime_UTR 67232859 67234622 67232859 ID=Msa0038000-mRNA-1:five_prime_utr;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67234623 67235043 67234623 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67235749 67236272 67235749 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67236358 67236465 67236358 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67236557 67236657 67236557 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67237317 67237407 67237317 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67237504 67237599 67237504 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67237688 67237753 67237688 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67238102 67238161 67238102 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67238279 67238836 67238279 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67239243 67239362 67239243 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67239698 67239766 67239698 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 CDS 67240484 67240549 67240484 ID=Msa0038000-mRNA-1:cds;Parent=Msa0038000-mRNA-1
chr1_1 three_prime_UTR 67240550 67241185 67240550 ID=Msa0038000-mRNA-1:three_prime_utr;Parent=Msa0038000-mRNA-1
Gene Sequence

>Msa0038000

ATGAGGAGGCAGATTCTCAATAGCACAGGGGGCATGACTCTTCCTGGCGCGGACACTGGTGGACCATCCAAAAAACCTATTTATCAGACAAAGAAAGGGAAAACAACGAATCGAAATCATAATGGTGCCGCTGCTGTCAAGACAGATGAAAGTGTTGAAGCAACGGAAACTACTGCTGATTTAGATTCAGAGGAACCTGAAAAGGTTGAAGAAGTGGAGATGGAGGACAAAGTTGAACTTCCTGAAGTTGTTGAAGAAGTAGTGGATGAAGATGATGATGTTGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTCAATCTGAATGATAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACCAATTGTCAAAAAAGAGATTAAAAATGGCATACCTTCTAAAAATGCTGCAGGTGCTACAAATAAACCTGTTACGAAGCCTGCAGCTGAAGAAACTGAAGATAGAAAACAGGCCAAAGTTGTGGTTGAGGATAAAAAGAAAAGGCACGATCCACAACTGTCTGCCGTGCCTTCTAAGCCGAGTGAAGGGAACCTTCGGTCGCCAATTTGCTGCATCATGGGTCATGTGGACACTGGCAAAACCAAGCTTCTGGATTGCATTCGAGGTACCAATGTTCAAGAAGGTGAGGCTGGGGGTATCACCCAACAGATTGGTGCAACGTACTTTCCTGCTGAGAACATACGTGAAAGAACCAAGGAACTGAAAGCTGATGCAACACTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACGAGTCATTCAATAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTCGTGGACATTATGCATGGCTTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACTGAATTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGACACAGCAGTCTAAGGATGTTCAGAATGAGTTCAATATGAGGGTCACTCAGATTGTCACTCAGTTCAAGGAACAAGGGCTAAATACAGAATTGTATTACAAAAACAAAGAAATGGGCGAGACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCGGATATGTTATTACTATTAGTTCAGTGGACCCAAAAGACCATGACCGAGAAGCTTACATACAGCGAAGAAGTGCAGTGTACCGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGGGATCAAATAGTTGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCTATGGGAATCAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAGCTAGTTTATATGTGGTAAAGCCTGATGATGATTTGGAATATATTAAAAAGGCAGCTTTGGAAGACGTGGAGTCGGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGCGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGAAGCATTATTGGAGTTTCTGAAAACTCCAGAAGTGAATATTCCTGTTAGTGCTATAAACATAGGCCCTGTACACAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGATCTTGCAGAAGAATTGGGTGTGAAAATTTTTATAGCGGATATCATTTATCATCTATTTGATCAATTTAAGGCTTACATGGACAACATTAAGGAGGAGAAAAAGAAAGAATCTGCGGATGAGGCAGTCTTCCCATGTGTTCTGAAGATCTTACCAAATTGTGTCTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGATTGGAACTCCAATTTGTATCCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTATGCGAAGAAAGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAACAGCAGAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGATGATCTGACTATGGAGGAATGGAAGCTGGTGGTTAAATTGAAGACTTTGTTCAAGATACAATAA
Protein sequence

>Msa0038000

MRRQILNSTGGMTLPGADTGGPSKKPIYQTKKGKTTNRNHNGAAAVKTDESVEATETTADLDSEEPEKVEEVEMEDKVELPEVVEEVVDEDDDVEDEWDAKSWDDVNLNDRGAFADEEVDSEPEPIVKKEIKNGIPSKNAAGATNKPVTKPAAEETEDRKQAKVVVEDKKKRHDPQLSAVPSKPSEGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMTQQSKDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMTEKLTYSEEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSAINIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICIPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELDDLTMEEWKLVVKLKTLFKIQ*