AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1435770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435770 MtrunA17_Chr1g0202021 95.926 1350 21 8 1 1325 1 1341 0.0 2540
Msa1435770 MtrunA17_Chr1g0201991 85.848 643 69 2 705 1325 184 826 0.0 1139
Msa1435770 MtrunA17_Chr4g0000221 66.379 464 114 10 720 1172 3 435 0.0 575
Msa1435770 MtrunA17_Chr4g0000991 61.916 428 107 7 686 1107 19 396 7.01e-165 498
Msa1435770 MtrunA17_Chr7g0264901 57.396 338 134 2 745 1076 25 358 2.72e-120 380
Msa1435770 MtrunA17_Chr4g0004141 62.348 247 55 4 1064 1304 216 430 6.62e-82 276
Msa1435770 MtrunA17_Chr4g0004141 53.304 227 72 5 756 979 13 208 9.66e-64 224
Msa1435770 MtrunA17_Chr7g0264471 48.669 263 124 3 752 1012 51 304 1.06e-75 255
Msa1435770 MtrunA17_Chr7g0263861 72.180 133 34 1 1109 1241 144 273 2.88e-56 196
Msa1435770 MtrunA17_Chr2g0312621 27.016 496 253 17 756 1211 495 921 5.20e-26 116
Msa1435770 MtrunA17_Chr4g0038951 85.714 49 6 1 987 1035 33 80 1.18e-19 84.7
Msa1435770 MtrunA17_Chr5g0412261 26.419 458 243 16 756 1188 200 588 4.18e-19 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1435770 AT1G76810.1 65.584 1139 300 24 248 1325 187 1294 0.0 1144
Msa1435770 AT1G76720.2 59.747 1267 379 36 94 1304 12 1203 0.0 1081
Msa1435770 AT1G76720.1 57.793 1341 358 39 1 1304 1 1170 0.0 1079
Msa1435770 AT1G21160.1 57.364 1032 354 21 347 1325 94 1092 0.0 969
Msa1435770 AT2G27700.1 70.103 485 128 6 716 1194 5 478 0.0 674
Msa1435770 AT2G27700.2 69.959 486 128 7 716 1194 5 479 0.0 669
Msa1435770 AT1G17220.1 27.349 479 244 18 756 1199 500 909 1.32e-26 119
Msa1435770 AT4G11160.3 38.346 133 60 2 756 884 218 332 4.57e-21 99.8

Find 374 sgRNAs with CRISPR-Local

Find 685 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTACGAAATTTGTGTAAA+AGG 0.120489 tig0027769:+15118 None:intergenic
TCATCTATTTGATCAATTTA+AGG 0.120606 tig0027769:-9314 Msa1435770:CDS
GAATTCACTAAAAGTAATTT+AGG 0.146710 tig0027769:-6820 Msa1435770:three_prime_UTR
GAAAACCCTAATCTCATAAA+TGG 0.164657 tig0027769:-15077 Msa1435770:exon
AATTCAAGCACATACCTTAA+TGG 0.180909 tig0027769:+8622 None:intergenic
TCGCATAATCAACCGGTTTA+TGG 0.181960 tig0027769:+8663 None:intergenic
TTGCAGGTTGACAGGCTTTA+TGG 0.183037 tig0027769:-11628 Msa1435770:intron
CCTTTCTTTGTCTGATAAAT+AGG 0.186529 tig0027769:+13285 None:intergenic
GTGTTCCATGCTTTGCATTT+TGG 0.208952 tig0027769:-7020 Msa1435770:three_prime_UTR
TCTATGTGATATTGCAATTT+TGG 0.214686 tig0027769:-11825 Msa1435770:CDS
GCTTCTCGGTCATGGTCTTT+TGG 0.220651 tig0027769:+10618 None:intergenic
TGGCTCATTGGAAGCATTAT+TGG 0.222532 tig0027769:-9545 Msa1435770:CDS
CAAGAAGGATCCGATTGTTT+TGG 0.225158 tig0027769:-9194 Msa1435770:CDS
TTCTTGTTGAAGACACAATT+TGG 0.236922 tig0027769:+9211 None:intergenic
GAACCGGTTGTTAGCTTTAC+AGG 0.257455 tig0027769:-14623 Msa1435770:CDS
GTATAGTAAATCACAAAATT+TGG 0.265554 tig0027769:+7185 None:intergenic
GGTGGAAGTGTGTTTGCTTC+TGG 0.266460 tig0027769:-14734 Msa1435770:CDS
ATTTGTGTAAAAGGGGAAAA+TGG 0.266485 tig0027769:+15127 None:intergenic
CACTTTCTTGTCAGCCGCTT+TGG 0.268956 tig0027769:+13635 None:intergenic
GGTTCTGCCCCTGGTGCTTC+AGG 0.278743 tig0027769:-13834 Msa1435770:CDS
TTCTCGTCGTCGCGGATTGC+TGG 0.281368 tig0027769:+15043 None:intergenic
CTTCCCCATTTATGAGATTA+GGG 0.297082 tig0027769:+15072 None:intergenic
AGAAAGTGCCAAAGCATGTT+AGG 0.301941 tig0027769:-13620 Msa1435770:CDS
CCCTTTCTTCGAACCCTTTG+AGG 0.302276 tig0027769:+14427 None:intergenic
TTTAGTGAATTCAAACTATC+AGG 0.303132 tig0027769:+6831 None:intergenic
AAGGCAGCGGCAGCAGCAGC+TGG 0.303633 tig0027769:-13729 Msa1435770:CDS
CATAGGTATGCATGCTTGTT+TGG 0.310986 tig0027769:-6984 Msa1435770:three_prime_UTR
TCTTCCCCATTTATGAGATT+AGG 0.311680 tig0027769:+15071 None:intergenic
TGATTTGGAATATATTAAAA+AGG 0.312978 tig0027769:-9647 Msa1435770:CDS
ATTCATTGTTGCATTGAATA+AGG 0.320644 tig0027769:-11729 Msa1435770:intron
AACTTGAGGTCTCGGGGTTC+AGG 0.322803 tig0027769:-11848 Msa1435770:CDS
AGGGCAGAAAGTAGCCATTA+AGG 0.323078 tig0027769:-8636 Msa1435770:intron
GTGAGTGATGAAATCGAGTT+TGG 0.323250 tig0027769:-14104 Msa1435770:CDS
GTCCTTGACAGTTACCCTTT+TGG 0.324115 tig0027769:+7214 None:intergenic
TTTACGGCTGCAGCTGGTTT+TGG 0.326903 tig0027769:-14548 Msa1435770:CDS
TCTTGGGAAGGGATACAAAT+TGG 0.327465 tig0027769:+8725 None:intergenic
GGCTTACATGGACAACATTA+AGG 0.327960 tig0027769:-9293 Msa1435770:CDS
TCCCAAGAGTTCATTGATAT+TGG 0.331197 tig0027769:-8710 Msa1435770:CDS
TGCATCAGCTTTCAGTTCCT+TGG 0.331642 tig0027769:+11928 None:intergenic
GCAGCAGGTTGTGCTGTAGC+AGG 0.333529 tig0027769:+13903 None:intergenic
TAGGGATCTTGCAGAAGAAT+TGG 0.335361 tig0027769:-9368 Msa1435770:CDS
CGTACGAAATTTGTGTAAAA+GGG 0.335560 tig0027769:+15119 None:intergenic
AGTGTGTTTGCTTCTGGATT+TGG 0.335749 tig0027769:-14728 Msa1435770:CDS
TCTTCTACAGCTTCAATTAC+CGG 0.335849 tig0027769:+13699 None:intergenic
TCTGCAAGATCCCTAGCTTC+AGG 0.339277 tig0027769:+9376 None:intergenic
AATTCACTAAAAGTAATTTA+GGG 0.339278 tig0027769:-6819 Msa1435770:three_prime_UTR
TGCATCTCCCTAACATGCTT+TGG 0.339681 tig0027769:+13612 None:intergenic
AGTTGCTTTGCTTTGCCTCT+AGG 0.342079 tig0027769:+15313 None:intergenic
CTAGATTGTCACTCAGTTCA+AGG 0.343186 tig0027769:-11427 Msa1435770:intron
TCAGCTGCAGGCTTCGTAAC+AGG 0.343911 tig0027769:+12214 None:intergenic
TTCCCTTCACTCGGCTTAGA+AGG 0.346826 tig0027769:+12112 None:intergenic
GGCATCTACCCTTGGCTCAT+TGG 0.352679 tig0027769:-9557 Msa1435770:CDS
CTCCTGCAGCTTGGATCCTC+TGG 0.358186 tig0027769:-7237 Msa1435770:three_prime_UTR
TTCATTGAGTAAAGCTATTC+CGG 0.362489 tig0027769:-14258 Msa1435770:CDS
CCTTTCTTCGAACCCTTTGA+GGG 0.364102 tig0027769:+14428 None:intergenic
TGACCCATGATGCAGCAAAT+TGG 0.364112 tig0027769:+12079 None:intergenic
ATCACATCCTTCTTGTGTAC+AGG 0.364120 tig0027769:+9469 None:intergenic
TTAACACGAAGTTCCTTCAT+TGG 0.364194 tig0027769:+10249 None:intergenic
GGGCTTGAACATGCTATTGC+TGG 0.370042 tig0027769:-9700 Msa1435770:CDS
CGGTTTATGGTTATTCTCAA+TGG 0.370182 tig0027769:+8676 None:intergenic
GAAAGAAGAAGCCCGGCGTT+TGG 0.370964 tig0027769:-13388 Msa1435770:CDS
CGGTATAATGCCGGACTTTG+AGG 0.371562 tig0027769:-7360 Msa1435770:three_prime_UTR
GCTTCTGGATTTGGTGTGCT+TGG 0.371860 tig0027769:-14719 Msa1435770:CDS
TTCGCTGTATGTAAGCTTCT+CGG 0.376770 tig0027769:+10604 None:intergenic
AAAACCCTAATCTCATAAAT+GGG 0.380417 tig0027769:-15076 Msa1435770:exon
ATACCTTTAAAATGCCTTCA+AGG 0.381890 tig0027769:+9161 None:intergenic
AGTTACCTTATTGCACTTGT+AGG 0.383336 tig0027769:+11339 None:intergenic
CACTGGCAAAACCAAGCTTC+TGG 0.384093 tig0027769:-12050 Msa1435770:CDS
CAACTTCGTTTGCAGATTGT+TGG 0.386207 tig0027769:-8294 Msa1435770:intron
TGGCTACCAGTGTACCGTTT+TGG 0.388026 tig0027769:-10486 Msa1435770:intron
ACGAGAGTATGCTACTATAT+TGG 0.389206 tig0027769:-9419 Msa1435770:CDS
ATGATGTCAATCTGAATGAT+AGG 0.389984 tig0027769:-13050 Msa1435770:CDS
CAGGAAGGTAAATTGTTAAC+TGG 0.390014 tig0027769:-13417 Msa1435770:CDS
GTTGCTTTGCTTTGCCTCTA+GGG 0.391688 tig0027769:+15314 None:intergenic
GACCAATATCAATGAACTCT+TGG 0.397471 tig0027769:+8708 None:intergenic
GCTCGAATTGTGGTAACAAT+TGG 0.397760 tig0027769:+10288 None:intergenic
GGTTTCTCTTCCACCGCAAC+CGG 0.398483 tig0027769:+14917 None:intergenic
CCACCGCCTTGTTGCGGCGG+AGG 0.398804 tig0027769:+15019 None:intergenic
CTAACAGGAATATTCACTTC+TGG 0.399897 tig0027769:+9508 None:intergenic
GTCGCCAATTTGCTGCATCA+TGG 0.404818 tig0027769:-12083 Msa1435770:CDS
ACCTTTCTTCGAACCCTTCG+AGG 0.405098 tig0027769:+14589 None:intergenic
CCTATGTTTATAGCACTAAC+AGG 0.407601 tig0027769:+9493 None:intergenic
CTGCAAGATCCCTAGCTTCA+GGG 0.408159 tig0027769:+9377 None:intergenic
ACTAATAGTAATAACATATC+CGG 0.410722 tig0027769:+10650 None:intergenic
TTCTTACCCGAGAAAGTGAT+TGG 0.411659 tig0027769:+14317 None:intergenic
TCTTCAGTTTCTTCAGCTGC+AGG 0.413951 tig0027769:+12202 None:intergenic
TTATTGAATGACTCGTGTCC+TGG 0.414476 tig0027769:+11869 None:intergenic
GAAGAACAGCAGAAAATGTT+CGG 0.414887 tig0027769:-8261 Msa1435770:CDS
TAATGATGATGAAGAGAAAT+CGG 0.414892 tig0027769:-14678 Msa1435770:CDS
TCGAAGAAAGGTGGTGGTGG+TGG 0.415570 tig0027769:-14578 Msa1435770:CDS
CCTATTTATCAGACAAAGAA+AGG 0.419360 tig0027769:-13285 Msa1435770:CDS
GTTCAGCCGGTTCCTGTAGT+AGG 0.420123 tig0027769:-13855 Msa1435770:CDS
TGGTGGTGGAAGTGTGTTTA+CGG 0.422401 tig0027769:-14564 Msa1435770:CDS
ATATATTCCAAATCATCATC+AGG 0.422912 tig0027769:+9655 None:intergenic
GGTAAAGCCTGATGATGATT+TGG 0.424032 tig0027769:-9662 Msa1435770:CDS
TTGAGTGACTCTATAGTTTG+TGG 0.428244 tig0027769:+11776 None:intergenic
TGATAATGGTGAGGAGAAAT+CGG 0.429154 tig0027769:-14489 Msa1435770:CDS
CCTTTCTTCGCATAATCAAC+CGG 0.430053 tig0027769:+8656 None:intergenic
CATTCAATAACTTGAGGTCT+CGG 0.430364 tig0027769:-11856 Msa1435770:CDS
GAACACCAAATGTATACAAA+TGG 0.432746 tig0027769:+7037 None:intergenic
CTCGATTTCATCACTCACTT+TGG 0.433153 tig0027769:+14109 None:intergenic
CAGCAGGTTGTGCTGTAGCA+GGG 0.434057 tig0027769:+13904 None:intergenic
TTGTGCCTACAAGTGCAATA+AGG 0.435172 tig0027769:-11344 Msa1435770:intron
TCCTCATTGCCTCCAAACGC+CGG 0.435876 tig0027769:+13376 None:intergenic
AGCAATGACACAGCAGTCTA+AGG 0.435929 tig0027769:-11572 Msa1435770:CDS
ATGATGATGTTGAGGATGAA+TGG 0.437230 tig0027769:-13089 Msa1435770:CDS
ACTACTTCTTCAACAACTTC+AGG 0.437617 tig0027769:+13120 None:intergenic
AAGCTTCTGGATTGCATTCG+AGG 0.438347 tig0027769:-12037 Msa1435770:CDS
GCTTGGATCCTCTGGCCAAA+AGG 0.439197 tig0027769:-7229 Msa1435770:three_prime_UTR
GAAGAGAAATCGGAGGTAAC+TGG 0.439368 tig0027769:-14668 Msa1435770:CDS
CAGCTTTGATTTCTTTGTGA+TGG 0.440327 tig0027769:+9866 None:intergenic
TGGTGAGGGCGTTTGTGTCC+AGG 0.441481 tig0027769:-9578 Msa1435770:CDS
CCCTGGTGCTTCAGGAGAAA+AGG 0.442140 tig0027769:-13826 Msa1435770:CDS
ACTCTTCCTGGCGCGGACAC+TGG 0.442324 tig0027769:-13324 Msa1435770:CDS
AGGACAGAAATTGTCATCAT+TGG 0.442816 tig0027769:+6851 None:intergenic
AATGAAGGAACTTCGTGTTA+AGG 0.444264 tig0027769:-10247 Msa1435770:intron
ACAACGAATCGAAATCATAA+TGG 0.444429 tig0027769:-13258 Msa1435770:CDS
TTTATCCTCAACCACAACTT+TGG 0.444603 tig0027769:+12168 None:intergenic
TGCTGAGGAGGAGCCGCAGC+AGG 0.448228 tig0027769:+13888 None:intergenic
GTTAATGGTGTTCTTCATGA+AGG 0.449872 tig0027769:-10416 Msa1435770:CDS
ATTCAATAACTTGAGGTCTC+GGG 0.449916 tig0027769:-11855 Msa1435770:CDS
TGTGTCATTGCTTTACGAAT+TGG 0.449988 tig0027769:+11583 None:intergenic
AGGAAGAGGAAGAGAAGCAA+AGG 0.451717 tig0027769:-13545 Msa1435770:CDS
AGATTCAGAGGAACCTGAAA+AGG 0.452639 tig0027769:-13178 Msa1435770:CDS
GGTGTCAGAGGATGCGGCTC+CGG 0.452789 tig0027769:-14936 Msa1435770:CDS
TGCTTTGTGCGGCGGTGAAA+AGG 0.453233 tig0027769:+15206 None:intergenic
GATGCAACACTGAAAGTTCC+CGG 0.455894 tig0027769:-11911 Msa1435770:CDS
TGCTGCGGCTCCTCCTCAGC+AGG 0.455982 tig0027769:-13886 Msa1435770:CDS
CTTTCACGTATGTTCTCAGC+AGG 0.456275 tig0027769:+11953 None:intergenic
AGAGGATGCGGCTCCGGTTG+CGG 0.458787 tig0027769:-14930 Msa1435770:CDS
TCGCAACATTGCAGGTTGAC+AGG 0.458948 tig0027769:-11636 Msa1435770:intron
TGATGAACCAATCACTTTCT+CGG 0.459759 tig0027769:-14324 Msa1435770:CDS
GACATAGGATGATCTGACTA+TGG 0.460108 tig0027769:-7500 Msa1435770:intron
CAAAGAAATCAAAGCTGCTA+TGG 0.462455 tig0027769:-9860 Msa1435770:CDS
TTGGAAGTCAAGGTTATTGA+AGG 0.462841 tig0027769:-10467 Msa1435770:CDS
TGATCAATTTAAGGCTTACA+TGG 0.463950 tig0027769:-9305 Msa1435770:CDS
TTGCTTGGGGATGAGGAAGA+TGG 0.465246 tig0027769:-14524 Msa1435770:CDS
TTGGGAGTTGATATCCTTGA+AGG 0.466103 tig0027769:-9175 Msa1435770:CDS
CCTCAAAGGGTTCGAAGAAA+GGG 0.467473 tig0027769:-14427 Msa1435770:CDS
CCCTCAAAGGGTTCGAAGAA+AGG 0.467654 tig0027769:-14428 Msa1435770:CDS
TTCCCTGTAAAGCTAACAAC+CGG 0.468099 tig0027769:+14620 None:intergenic
GATAGAGGAACTTGAGAGAC+AGG 0.468572 tig0027769:-13499 Msa1435770:CDS
AAGAACAGCAGAAAATGTTC+GGG 0.470152 tig0027769:-8260 Msa1435770:CDS
AGAAACTGAAGATAGAAAAC+AGG 0.470475 tig0027769:-12191 Msa1435770:CDS
GATGCAATGATGCAGATAGA+AGG 0.470608 tig0027769:-7302 Msa1435770:three_prime_UTR
GGTATAATGCCGGACTTTGA+GGG 0.472480 tig0027769:-7359 Msa1435770:three_prime_UTR
CGGTCTTGAGCAGGATTGAC+AGG 0.472577 tig0027769:-9603 Msa1435770:CDS
TTTCAATGTAACAGCGAAAG+AGG 0.476022 tig0027769:+15166 None:intergenic
GATGAACCAATCACTTTCTC+GGG 0.476483 tig0027769:-14323 Msa1435770:CDS
GGTCCACCAGTGTCCGCGCC+AGG 0.479029 tig0027769:+13318 None:intergenic
AATGTTCAAGAAGGTGAGGC+TGG 0.479918 tig0027769:-12010 Msa1435770:CDS
TATTCATCGTCATCGATAAC+CGG 0.480313 tig0027769:+14977 None:intergenic
ACCAATATCAATGAACTCTT+GGG 0.480786 tig0027769:+8709 None:intergenic
TGTGTCCAGGCATCTACCCT+TGG 0.481656 tig0027769:-9565 Msa1435770:CDS
GGTGATAATGATAATGATAA+TGG 0.482327 tig0027769:-14503 Msa1435770:CDS
ACTGAAAGTTCCCGGTCTAC+TGG 0.483185 tig0027769:-11903 Msa1435770:CDS
CCTCATTGCCTCCAAACGCC+GGG 0.486379 tig0027769:+13377 None:intergenic
AGGGATCTTGCAGAAGAATT+GGG 0.486944 tig0027769:-9367 Msa1435770:CDS
TCGCCAATTTGCTGCATCAT+GGG 0.487968 tig0027769:-12082 Msa1435770:CDS
GATAAGCTTCTCGCAGAGCT+TGG 0.489009 tig0027769:-13933 Msa1435770:CDS
AGCCTCACCTTCTTGAACAT+TGG 0.489331 tig0027769:+12012 None:intergenic
TGAGAATGATGATGGAGAAG+AGG 0.490930 tig0027769:-14378 Msa1435770:CDS
TGATGATGTTGAGGATGAAT+GGG 0.491154 tig0027769:-13088 Msa1435770:CDS
AGAGGAGCGACGAAGGATAG+AGG 0.492105 tig0027769:-13514 Msa1435770:CDS
TCAAAGTCACCCCTGAAGCT+AGG 0.492751 tig0027769:-9387 Msa1435770:CDS
CCGGTTGATTATGCGAAGAA+AGG 0.495046 tig0027769:-8656 Msa1435770:CDS
TAGGGAGATGCAAGAACTAC+TGG 0.496180 tig0027769:-13601 Msa1435770:CDS
AGAGGAGAGTAAGAATGAAA+AGG 0.496191 tig0027769:-14360 Msa1435770:CDS
AAAGAAAGAATCTGCGGATG+AGG 0.496199 tig0027769:-9263 Msa1435770:CDS
AATAACCTTGACTTCCAAAA+CGG 0.496574 tig0027769:+10472 None:intergenic
TCCTCGAAGGGTTCGAAGAA+AGG 0.497317 tig0027769:-14590 Msa1435770:CDS
CATTGAGAATAACCATAAAC+CGG 0.497395 tig0027769:-8675 Msa1435770:CDS
GTATGTAAGCTTCTCGGTCA+TGG 0.499658 tig0027769:+10610 None:intergenic
CTTGGATCCTCTGGCCAAAA+GGG 0.500718 tig0027769:-7228 Msa1435770:three_prime_UTR
CCTGTAGTAGGTTCTGCCCC+TGG 0.500848 tig0027769:-13843 Msa1435770:CDS
CGATGACGATGAGGATGAAC+CGG 0.501281 tig0027769:-14639 Msa1435770:CDS
ATTTAATATTTCAGTGGTGA+AGG 0.501321 tig0027769:-10677 Msa1435770:intron
TTCAGAATGAGTTCAATATG+AGG 0.501847 tig0027769:-11546 Msa1435770:CDS
GTCATCAAAGGGTTCGAAGA+AGG 0.501993 tig0027769:-14288 Msa1435770:CDS
AAAAGAATAAGAAGAAGAGT+GGG 0.502262 tig0027769:-13983 Msa1435770:CDS
TATTGAATGACTCGTGTCCT+GGG 0.502284 tig0027769:+11870 None:intergenic
CGGTTGATTATGCGAAGAAA+GGG 0.505603 tig0027769:-8655 Msa1435770:CDS
AGGCAGATTCTCAATAGCAC+AGG 0.506514 tig0027769:-13354 Msa1435770:CDS
ATTGGACGATTTCTGTTCAA+AGG 0.509473 tig0027769:+6869 None:intergenic
CGAAGTTCCTTCATTGGATG+AGG 0.509629 tig0027769:+10255 None:intergenic
CCTCCGCCGCAACAAGGCGG+TGG 0.509665 tig0027769:-15019 Msa1435770:CDS
AGAGGCTAAACGTAGAAAGA+AGG 0.510786 tig0027769:-13472 Msa1435770:CDS
GACCGAAGGTTCCCTTCACT+CGG 0.511610 tig0027769:+12103 None:intergenic
ATGAGCCAAGGGTAGATGCC+TGG 0.511848 tig0027769:+9560 None:intergenic
ATACACATCTGTGGTATACA+TGG 0.512971 tig0027769:-7166 Msa1435770:three_prime_UTR
GGTTGAAGAAGTGGAGATGG+AGG 0.513489 tig0027769:-13157 Msa1435770:CDS
ACGTGGAGTCGGTCTTGAGC+AGG 0.513755 tig0027769:-9612 Msa1435770:CDS
ATATCAACTCCCAAAACAAT+CGG 0.514889 tig0027769:+9184 None:intergenic
GGCCAGAGGATCCAAGCTGC+AGG 0.515164 tig0027769:+7235 None:intergenic
AGCCGAGTGAAGGGAACCTT+CGG 0.515404 tig0027769:-12105 Msa1435770:CDS
GCAGAACCTACTACAGGAAC+CGG 0.517619 tig0027769:+13849 None:intergenic
ACTTCTATGCTCCTGCAGCT+TGG 0.517762 tig0027769:-7246 Msa1435770:three_prime_UTR
AAAGGTTGAAGAAGTGGAGA+TGG 0.518426 tig0027769:-13160 Msa1435770:CDS
GGTTCGAAGAAAGGTGGTGG+TGG 0.518634 tig0027769:-14581 Msa1435770:CDS
CGTCTGTGTAGTGTGAGAGC+TGG 0.518847 tig0027769:-6901 Msa1435770:three_prime_UTR
CTTCCTGGCGCGGACACTGG+TGG 0.519626 tig0027769:-13321 Msa1435770:CDS
TGCTGGAGCTAGTTTATATG+TGG 0.519781 tig0027769:-9683 Msa1435770:CDS
GGAGGAGGTGTCAGAGGATG+CGG 0.521052 tig0027769:-14942 Msa1435770:CDS
ACGAAAATTGCTTTGTGCGG+CGG 0.521104 tig0027769:+15198 None:intergenic
GTCACTCAGTTCAAGGAACA+AGG 0.521657 tig0027769:-11420 Msa1435770:CDS
CCTGTTAGTGCTATAAACAT+AGG 0.522577 tig0027769:-9493 Msa1435770:CDS
ATTGACACCTCATCCAATGA+AGG 0.523422 tig0027769:-10262 Msa1435770:CDS
AGCAGCAGCTGGAAGTGCAC+CGG 0.523466 tig0027769:-13718 Msa1435770:CDS
GGGAAGAAGAAGCCCTCAAA+GGG 0.524012 tig0027769:-14440 Msa1435770:CDS
AGAGGCAAAGCAAAGCAACT+TGG 0.524605 tig0027769:-15310 Msa1435770:five_prime_UTR
ATGTTCAAGAAGGTGAGGCT+GGG 0.524700 tig0027769:-12009 Msa1435770:CDS
TGGGAGGACTAAAGAAGAGG+AGG 0.525672 tig0027769:-13964 Msa1435770:CDS
TACATACAGCGAAGAAGTGC+AGG 0.526176 tig0027769:-10594 Msa1435770:intron
AGAATAAGAAGAAGAGTGGG+AGG 0.527306 tig0027769:-13980 Msa1435770:CDS
AGTGTGTTTACGGCTGCAGC+TGG 0.528190 tig0027769:-14554 Msa1435770:CDS
CAAAGTCACCCCTGAAGCTA+GGG 0.528771 tig0027769:-9386 Msa1435770:CDS
AGGTTGACAGGCTTTATGGC+TGG 0.530442 tig0027769:-11624 Msa1435770:CDS
TCGAATGCAATCCAGAAGCT+TGG 0.530972 tig0027769:+12039 None:intergenic
TTTCCACCGCCTTGTTGCGG+CGG 0.531546 tig0027769:+15016 None:intergenic
GAAAGTGCCAAAGCATGTTA+GGG 0.533187 tig0027769:-13619 Msa1435770:CDS
TTAATGGTGTTCTTCATGAA+GGG 0.534561 tig0027769:-10415 Msa1435770:CDS
GACTATGGAGGAATGGAAGC+TGG 0.535656 tig0027769:-7485 Msa1435770:CDS
ACCTGAAAAGGTTGAAGAAG+TGG 0.535666 tig0027769:-13166 Msa1435770:CDS
TGAGAGAAAGCAAATATTCA+CGG 0.537618 tig0027769:-7110 Msa1435770:three_prime_UTR
GTCAAGGTTATTGAAGGCCA+TGG 0.537843 tig0027769:-10461 Msa1435770:CDS
TCACATCCTTCTTGTGTACA+GGG 0.538962 tig0027769:+9470 None:intergenic
GTACGTTGCACCAATCTGTT+GGG 0.541158 tig0027769:+11979 None:intergenic
AAAGAAATCAAAGCTGCTAT+GGG 0.542406 tig0027769:-9859 Msa1435770:CDS
GAAGCAAAGGAAAGAAGAAG+AGG 0.544089 tig0027769:-13532 Msa1435770:CDS
GGGAATCAAGATCACTGCCC+AGG 0.545100 tig0027769:-9839 Msa1435770:intron
TGAGTGATGAAATCGAGTTT+GGG 0.545205 tig0027769:-14103 Msa1435770:CDS
TCTGTATCTGAGTCTGCTAA+AGG 0.545690 tig0027769:-14221 Msa1435770:CDS
AGTACGTTGCACCAATCTGT+TGG 0.546668 tig0027769:+11978 None:intergenic
CTCAAAGGGTTCGAAGAAAG+GGG 0.547303 tig0027769:-14426 Msa1435770:CDS
GTACGAAATTTGTGTAAAAG+GGG 0.548442 tig0027769:+15120 None:intergenic
GAGTGGGAGGACTAAAGAAG+AGG 0.548679 tig0027769:-13967 Msa1435770:CDS
TTTGACAATTGGTTCAGGCT+CGG 0.549296 tig0027769:+12999 None:intergenic
AGCAGGTTGTGCTGTAGCAG+GGG 0.552590 tig0027769:+13905 None:intergenic
GGTATCAATAACCAGTAGAC+CGG 0.552679 tig0027769:+11892 None:intergenic
ATGATCTGACTATGGAGGAA+TGG 0.553038 tig0027769:-7492 Msa1435770:CDS
AGAAGAAGCCCGGCGTTTGG+AGG 0.555273 tig0027769:-13385 Msa1435770:CDS
CTAATAGTAATAACATATCC+GGG 0.555274 tig0027769:+10651 None:intergenic
GAGTAAAGCTATTCCGGAGG+AGG 0.555869 tig0027769:-14252 Msa1435770:CDS
CGGTGGAAAATCAAAGAAGA+AGG 0.555949 tig0027769:-15002 Msa1435770:CDS
CAACATCAATAGTAGTTCCA+TGG 0.556648 tig0027769:+10444 None:intergenic
GCATTAGATGAGAATGATGA+TGG 0.559178 tig0027769:-14386 Msa1435770:CDS
TGTTCAAGAAGGTGAGGCTG+GGG 0.559825 tig0027769:-12008 Msa1435770:CDS
TGTTATTACTATTAGTTCAG+TGG 0.560033 tig0027769:-10643 Msa1435770:CDS
CATAGGCCCTGTACACAAGA+AGG 0.561171 tig0027769:-9476 Msa1435770:CDS
TTTCAGTGGTGAAGGAATCC+CGG 0.561971 tig0027769:-10669 Msa1435770:intron
TGCTTTCTCTCATCGAACAA+AGG 0.562604 tig0027769:+7121 None:intergenic
CAAAACCAAAATGCAAAGCA+TGG 0.562929 tig0027769:+7015 None:intergenic
GAAGGCACGGCAGACAGTTG+TGG 0.563477 tig0027769:+12130 None:intergenic
ACAGAAACACTATCCTCCTC+CGG 0.563721 tig0027769:+14239 None:intergenic
TGAAATGTTCGGTATAATGC+CGG 0.564900 tig0027769:-7369 Msa1435770:three_prime_UTR
TCAAAGGGTTCGAAGAAGGC+AGG 0.566364 tig0027769:-14284 Msa1435770:CDS
ACTACTGGCTAGAAGAAAAG+AGG 0.566570 tig0027769:-13586 Msa1435770:CDS
AAGAAGAAGAGGAGCGACGA+AGG 0.568334 tig0027769:-13521 Msa1435770:CDS
ACAGGCCAAAGTTGTGGTTG+AGG 0.569051 tig0027769:-12173 Msa1435770:CDS
TGATGTCAATCTGAATGATA+GGG 0.569686 tig0027769:-13049 Msa1435770:CDS
GTAAGCAGAAAGAAGAAGCC+CGG 0.569714 tig0027769:-13395 Msa1435770:CDS
GGTAAGATCTTCAGAACACA+TGG 0.572020 tig0027769:+9232 None:intergenic
ACACAAGAAGGATGTGATGA+AGG 0.572047 tig0027769:-9464 Msa1435770:CDS
CGGAGTGGAGGAGGTGTCAG+AGG 0.573069 tig0027769:-14948 Msa1435770:CDS
GCAGGATGATAAAGTTCAGC+CGG 0.573080 tig0027769:-13868 Msa1435770:CDS
GTGCCTTCTAAGCCGAGTGA+AGG 0.573219 tig0027769:-12115 Msa1435770:CDS
ATATTCTATCGGAGTGGAGG+AGG 0.574722 tig0027769:-14957 Msa1435770:CDS
AAAAGTGGTGGTGGTAGTAG+TGG 0.574855 tig0027769:-14755 Msa1435770:CDS
GGATGCGGCTCCGGTTGCGG+TGG 0.575979 tig0027769:-14927 Msa1435770:CDS
GGGCATGACTCTTCCTGGCG+CGG 0.576478 tig0027769:-13331 Msa1435770:CDS
ATATCAATGAACTCTTGGGA+AGG 0.576746 tig0027769:+8713 None:intergenic
GTTGCGGTGGAAGAGAAACC+CGG 0.576756 tig0027769:-14914 Msa1435770:CDS
AGAAAAGGAGAAGAAGGCAG+CGG 0.577587 tig0027769:-13742 Msa1435770:CDS
AGTAAGAGTGAAGAGGTCGT+TGG 0.577832 tig0027769:-14023 Msa1435770:CDS
GGGAAGAAGAAATCCTCGAA+GGG 0.578909 tig0027769:-14602 Msa1435770:CDS
TATCAATGAACTCTTGGGAA+GGG 0.579843 tig0027769:+8714 None:intergenic
AAATCGGAGGTAACTGGTGA+GGG 0.580371 tig0027769:-14662 Msa1435770:CDS
TACTGCTGATTTAGATTCAG+AGG 0.580560 tig0027769:-13190 Msa1435770:CDS
GGGGAAGAAGAAGCCCTCAA+AGG 0.580807 tig0027769:-14441 Msa1435770:CDS
ACTTGAGAGACAGGCAGAAG+AGG 0.581232 tig0027769:-13490 Msa1435770:CDS
AGATGAAAGTGTTGAAGCAA+CGG 0.581844 tig0027769:-13217 Msa1435770:CDS
TTGGTCGTGGACATTATGCA+TGG 0.582868 tig0027769:-11806 Msa1435770:CDS
GGCCAAAAGGGTAACTGTCA+AGG 0.582961 tig0027769:-7216 Msa1435770:three_prime_UTR
ATATTACCATTGTCAACACT+AGG 0.583473 tig0027769:+14047 None:intergenic
AGGATTGACAGGAGTGGTGA+GGG 0.584013 tig0027769:-9592 Msa1435770:CDS
ATTTGGTGTGCTTGGTGATG+AGG 0.584128 tig0027769:-14711 Msa1435770:CDS
TGCTACAGCACAACCTGCTG+CGG 0.584367 tig0027769:-13901 Msa1435770:CDS
TTCAATAACTTGAGGTCTCG+GGG 0.585880 tig0027769:-11854 Msa1435770:CDS
TGATTTACTATACACATCTG+TGG 0.586356 tig0027769:-7175 Msa1435770:three_prime_UTR
TAGAAAACAGGCCAAAGTTG+TGG 0.586435 tig0027769:-12179 Msa1435770:CDS
TAATGGTGTTCTTCATGAAG+GGG 0.587624 tig0027769:-10414 Msa1435770:CDS
ACTTTATCATCCTGCTGAGG+AGG 0.588843 tig0027769:+13876 None:intergenic
TTTATGGTTATTCTCAATGG+AGG 0.590292 tig0027769:+8679 None:intergenic
TGCAAGATCCCTAGCTTCAG+GGG 0.591230 tig0027769:+9378 None:intergenic
AGCTTTGGAAGACGTGGAGT+CGG 0.591536 tig0027769:-9623 Msa1435770:CDS
CCAGGGGCAGAACCTACTAC+AGG 0.591678 tig0027769:+13843 None:intergenic
CGAGGTACCAATGTTCAAGA+AGG 0.591705 tig0027769:-12019 Msa1435770:CDS
GAGAGAAAGCAAATATTCAC+GGG 0.592615 tig0027769:-7109 Msa1435770:three_prime_UTR
GTTCAATATGAGGGTCACTC+AGG 0.592840 tig0027769:-11536 Msa1435770:intron
TGAAGTTGTTGAAGAAGTAG+TGG 0.593967 tig0027769:-13118 Msa1435770:CDS
GGATGAAGATGATGATGTTG+AGG 0.594806 tig0027769:-13097 Msa1435770:CDS
GAGAATCCTCCGCCGCAACA+AGG 0.596347 tig0027769:-15025 Msa1435770:CDS
TGCAGCAAATTGGCGACCGA+AGG 0.597673 tig0027769:+12089 None:intergenic
TGCCTTCTAAGCCGAGTGAA+GGG 0.599569 tig0027769:-12114 Msa1435770:CDS
TCTGCATCATTGCATCTACA+AGG 0.602418 tig0027769:+7309 None:intergenic
AGTGGTGGTGGTAGTAGTGG+TGG 0.603621 tig0027769:-14752 Msa1435770:CDS
CAGGATTGACAGGAGTGGTG+AGG 0.604875 tig0027769:-9593 Msa1435770:CDS
AAAATCAAAGAAGAAGGCTC+CGG 0.604903 tig0027769:-14996 Msa1435770:CDS
GGCGTTTGGAGGCAATGAGG+AGG 0.605409 tig0027769:-13374 Msa1435770:CDS
AAGGGTTCGAAGAAAGGTGG+TGG 0.607024 tig0027769:-14584 Msa1435770:CDS
AAAGGCAGCTTTGGAAGACG+TGG 0.608385 tig0027769:-9629 Msa1435770:CDS
TGGTGCTTCAGGAGAAAAGG+AGG 0.608601 tig0027769:-13823 Msa1435770:CDS
CTATTTATCAGACAAAGAAA+GGG 0.609015 tig0027769:-13284 Msa1435770:CDS
GATGACGATGAATATTCTAT+CGG 0.610557 tig0027769:-14968 Msa1435770:CDS
ATAATGCTTCCAATGAGCCA+AGG 0.611270 tig0027769:+9548 None:intergenic
TTGCTGCATCATGGGTCATG+TGG 0.613343 tig0027769:-12074 Msa1435770:CDS
TACCAATGTTCAAGAAGGTG+AGG 0.614228 tig0027769:-12014 Msa1435770:CDS
GAAATCGGAGGTAACTGGTG+AGG 0.615537 tig0027769:-14663 Msa1435770:CDS
TAATATAAGTAAGAGTGAAG+AGG 0.616758 tig0027769:-14030 Msa1435770:CDS
TTCACTCGGCTTAGAAGGCA+CGG 0.621700 tig0027769:+12117 None:intergenic
GTTTCTTGTACAAGTCACTC+TGG 0.621796 tig0027769:+7267 None:intergenic
CAGATTCTCAATAGCACAGG+GGG 0.622051 tig0027769:-13351 Msa1435770:CDS
AAATTGTGTCTTCAACAAGA+AGG 0.623805 tig0027769:-9209 Msa1435770:CDS
GGCAGATTCTCAATAGCACA+GGG 0.625757 tig0027769:-13353 Msa1435770:CDS
AACAGCAGAAAATGTTCGGG+AGG 0.628525 tig0027769:-8257 Msa1435770:CDS
TAATGCTTCCAATGAGCCAA+GGG 0.629489 tig0027769:+9549 None:intergenic
CCCGGCGTTTGGAGGCAATG+AGG 0.629537 tig0027769:-13377 Msa1435770:CDS
TGAATATTCTATCGGAGTGG+AGG 0.629646 tig0027769:-14960 Msa1435770:CDS
TGTCAATAAAGCTCGAATTG+TGG 0.631490 tig0027769:+10278 None:intergenic
AAAACGAAAATTGCTTTGTG+CGG 0.632518 tig0027769:+15195 None:intergenic
AGGGAAGAAGAAATCCTCGA+AGG 0.633393 tig0027769:-14603 Msa1435770:CDS
GAGTGAAAGTGTAAATGTTG+TGG 0.635334 tig0027769:-14081 Msa1435770:CDS
TCAGAATGAGTTCAATATGA+GGG 0.640267 tig0027769:-11545 Msa1435770:CDS
ATAGGATGATCTGACTATGG+AGG 0.643473 tig0027769:-7497 Msa1435770:intron
ACGAGTCATTCAATAACTTG+AGG 0.644529 tig0027769:-11862 Msa1435770:CDS
CTACTGGTTATTGATACCCC+AGG 0.645521 tig0027769:-11887 Msa1435770:CDS
TTGCGGTGGAAGAGAAACCC+GGG 0.650130 tig0027769:-14913 Msa1435770:CDS
TGATGATGAAGAGAAATCGG+AGG 0.651638 tig0027769:-14675 Msa1435770:CDS
AACCGGTTGTTAGCTTTACA+GGG 0.652337 tig0027769:-14622 Msa1435770:CDS
TGGTGAGGAGAAATCGGACG+AGG 0.653929 tig0027769:-14483 Msa1435770:CDS
GTATTCATTAAAGATAAACA+AGG 0.654702 tig0027769:-7399 Msa1435770:three_prime_UTR
TTCATCTGTCTTGACAGCAG+CGG 0.655555 tig0027769:+13233 None:intergenic
AAACCCTAATCTCATAAATG+GGG 0.655994 tig0027769:-15075 Msa1435770:exon
TCGAAGGGTTCGAAGAAAGG+TGG 0.660488 tig0027769:-14587 Msa1435770:CDS
TGAAAGTGTAAATGTTGTGG+AGG 0.660670 tig0027769:-14078 Msa1435770:CDS
CGATGAATATTCTATCGGAG+TGG 0.661588 tig0027769:-14963 Msa1435770:CDS
ATCATGGGTCATGTGGACAC+TGG 0.664092 tig0027769:-12067 Msa1435770:CDS
AGGGTAACTGTCAAGGACGA+AGG 0.664505 tig0027769:-7209 Msa1435770:three_prime_UTR
GTTCAAGAAGGTGAGGCTGG+GGG 0.665074 tig0027769:-12007 Msa1435770:CDS
ATTGAATGACTCGTGTCCTG+GGG 0.670625 tig0027769:+11871 None:intergenic
TGGTGATGATGAGAAAGATG+AGG 0.670930 tig0027769:-14198 Msa1435770:CDS
TTGAGCAGGATTGACAGGAG+TGG 0.672991 tig0027769:-9598 Msa1435770:CDS
GTATCTGAGTCTGCTAAAGG+TGG 0.673325 tig0027769:-14218 Msa1435770:CDS
TGAACTTTATCATCCTGCTG+AGG 0.673872 tig0027769:+13873 None:intergenic
GTATCAATAACCAGTAGACC+GGG 0.674744 tig0027769:+11893 None:intergenic
AAGGGTTCGAAGAAGGCAGG+TGG 0.678507 tig0027769:-14281 Msa1435770:CDS
GAGAAGCCTAGTGTTGACAA+TGG 0.678840 tig0027769:-14053 Msa1435770:CDS
TCACTCAGTTCAAGGAACAA+GGG 0.682333 tig0027769:-11419 Msa1435770:CDS
GCGGAGGATTCTCGTCGTCG+CGG 0.685176 tig0027769:+15035 None:intergenic
ATTGAGTAAAGCTATTCCGG+AGG 0.685642 tig0027769:-14255 Msa1435770:CDS
TGGTGAGGGCGATGACGATG+AGG 0.685790 tig0027769:-14648 Msa1435770:CDS
GGTGCTTCAGGAGAAAAGGA+GGG 0.687014 tig0027769:-13822 Msa1435770:CDS
AGCTGTAGAAGAGAAAGCTG+AGG 0.688379 tig0027769:-13688 Msa1435770:CDS
GATGTCAATCTGAATGATAG+GGG 0.693218 tig0027769:-13048 Msa1435770:CDS
TCAAAGGGTTCGAAGAAAGG+GGG 0.694476 tig0027769:-14425 Msa1435770:CDS
AATCCTCCGCCGCAACAAGG+CGG 0.709148 tig0027769:-15022 Msa1435770:CDS
TTACATGGACAACATTAAGG+AGG 0.709891 tig0027769:-9290 Msa1435770:CDS
GAACATACGTGAAAGAACCA+AGG 0.716522 tig0027769:-11945 Msa1435770:CDS
TAATGATAATGATAATGGTG+AGG 0.719083 tig0027769:-14498 Msa1435770:CDS
AAATGATTCGAAGACCAAAG+CGG 0.720285 tig0027769:-13649 Msa1435770:CDS
GTAAGATCTTCAGAACACAT+GGG 0.723306 tig0027769:+9233 None:intergenic
AGTACAATTACAAACCCTAG+AGG 0.738851 tig0027769:-15328 None:intergenic
TATGGAGGAATGGAAGCTGG+TGG 0.758669 tig0027769:-7482 Msa1435770:CDS
GCAGATTCTCAATAGCACAG+GGG 0.788332 tig0027769:-13352 Msa1435770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAAGTATTAAATTTTACA+AGG + tig0027769:9828-9847 None:intergenic 10.0%
!! ACTAATAAAGTTTATAATAT+AGG - tig0027769:11817-11836 Msa1435770:CDS 10.0%
!! CTAATAAAGTTTATAATATA+GGG - tig0027769:11818-11837 Msa1435770:CDS 10.0%
!!! AATTAGCAATTTTATATTTA+TGG - tig0027769:13146-13165 Msa1435770:CDS 10.0%
!!! CATACATATTTTTTTTAATA+TGG - tig0027769:14147-14166 Msa1435770:CDS 10.0%
!!! TTAATAATATACATTTTTTG+TGG - tig0027769:14372-14391 Msa1435770:CDS 10.0%
!! AGAAAAAAATTCAAAAACTA+AGG + tig0027769:9414-9433 None:intergenic 15.0%
!! AATAAACTAGTAAATTATTG+TGG - tig0027769:9496-9515 Msa1435770:CDS 15.0%
!! ATAAACTAGTAAATTATTGT+GGG - tig0027769:9497-9516 Msa1435770:CDS 15.0%
!!! AGTTTTTTTGTTTTTGTTTT+TGG - tig0027769:10623-10642 Msa1435770:CDS 15.0%
!! TATTACAAAAACAAAGAAAT+GGG - tig0027769:10749-10768 Msa1435770:intron 15.0%
!! AAATAATTGATGTAAAATGT+AGG + tig0027769:11131-11150 None:intergenic 15.0%
!!! TTTTACATCAATTATTTTGT+TGG - tig0027769:11134-11153 Msa1435770:intron 15.0%
!! TATATGTAATACTATAGTTA+TGG + tig0027769:11389-11408 None:intergenic 15.0%
!! TTTAGTATTTAATATTTCAG+TGG - tig0027769:11447-11466 Msa1435770:intron 15.0%
!!! TGATTTGGAATATATTAAAA+AGG - tig0027769:12483-12502 Msa1435770:intron 15.0%
!! AAAGAAATAAAAATGTATAG+AGG - tig0027769:13785-13804 Msa1435770:CDS 15.0%
!! ATATTCTCAAAACTAATTAT+CGG - tig0027769:13948-13967 Msa1435770:CDS 15.0%
!!! TATTTTTTTTAATATGGATG+AGG - tig0027769:14153-14172 Msa1435770:CDS 15.0%
!! ATTACTCATTTAACTATTAT+TGG - tig0027769:14564-14583 Msa1435770:CDS 15.0%
!! AATTCACTAAAAGTAATTTA+GGG - tig0027769:15311-15330 Msa1435770:five_prime_UTR 15.0%
!!! ATCATCATCATTATCTTTTT+TGG + tig0027769:7274-7293 None:intergenic 20.0%
!!! CTTATTCTTTTTCTTATTCT+TGG + tig0027769:8138-8157 None:intergenic 20.0%
!! AAAAAAGAAGAAAAAGAAGA+AGG - tig0027769:8361-8380 Msa1435770:intron 20.0%
!!! TTAATCTCTTTTTTGACAAT+TGG + tig0027769:9145-9164 None:intergenic 20.0%
!! GTCAAAAAAGAGATTAAAAA+TGG - tig0027769:9148-9167 Msa1435770:intron 20.0%
!!! AATATAAATTGATGCTACTT+TGG - tig0027769:9370-9389 Msa1435770:CDS 20.0%
!!! TTCCAATATATGTTTTTTAC+AGG - tig0027769:10449-10468 Msa1435770:CDS 20.0%
!! AACCTGTAAAAAACATATAT+TGG + tig0027769:10454-10473 None:intergenic 20.0%
!! TGAAACAAGAAAAATTAGTA+TGG + tig0027769:10680-10699 None:intergenic 20.0%
!! GTATTACAAAAACAAAGAAA+TGG - tig0027769:10748-10767 Msa1435770:intron 20.0%
!! ACTAATAGTAATAACATATC+CGG + tig0027769:11483-11502 None:intergenic 20.0%
!!! ATTGATGTTGTTTTAGTTAA+TGG - tig0027769:11699-11718 Msa1435770:intron 20.0%
!!! ATTTATTTTAAAGCTGGTTT+GGG - tig0027769:11929-11948 Msa1435770:CDS 20.0%
!! AAAACCATAGTTATATAAAC+TGG + tig0027769:12346-12365 None:intergenic 20.0%
!! TCATCTATTTGATCAATTTA+AGG - tig0027769:12816-12835 Msa1435770:intron 20.0%
!!! AATTTTATATTTATGGCCTA+TGG - tig0027769:13153-13172 Msa1435770:CDS 20.0%
!! TATTCTCAAAACTAATTATC+GGG - tig0027769:13949-13968 Msa1435770:CDS 20.0%
!! TTGAAACTATGTAAAATAAG+TGG + tig0027769:14318-14337 None:intergenic 20.0%
!! TGTATATTATTAACCACTTT+CGG + tig0027769:14365-14384 None:intergenic 20.0%
!!! TTTTTTTTCCTAAGAAAAAG+AGG + tig0027769:14456-14475 None:intergenic 20.0%
!! TAAAAAATTGACCCAAAAAA+GGG - tig0027769:14481-14500 Msa1435770:CDS 20.0%
!!! TAACTATTATTGGATTTTGT+TGG - tig0027769:14574-14593 Msa1435770:CDS 20.0%
!! GTATTCATTAAAGATAAACA+AGG - tig0027769:14731-14750 Msa1435770:CDS 20.0%
!! GTATAGTAAATCACAAAATT+TGG + tig0027769:14948-14967 None:intergenic 20.0%
!!! ATTTTCCATTTGTATACATT+TGG - tig0027769:15088-15107 Msa1435770:five_prime_UTR 20.0%
!! GAATTCACTAAAAGTAATTT+AGG - tig0027769:15310-15329 Msa1435770:five_prime_UTR 20.0%
! AAAACCCTAATCTCATAAAT+GGG - tig0027769:7054-7073 Msa1435770:three_prime_UTR 25.0%
!!! TGAATGAAATTGTTTTTGCT+GGG - tig0027769:7331-7350 Msa1435770:three_prime_UTR 25.0%
!! TAATGATGATGAAGAGAAAT+CGG - tig0027769:7452-7471 Msa1435770:CDS 25.0%
!! GGTGATAATGATAATGATAA+TGG - tig0027769:7627-7646 Msa1435770:intron 25.0%
!!! TAATGATAATGATAATGGTG+AGG - tig0027769:7632-7651 Msa1435770:intron 25.0%
! TAAGAAAAAGAAGTCATCAA+AGG - tig0027769:7830-7849 Msa1435770:intron 25.0%
! AAGAAAAAGAAGTCATCAAA+GGG - tig0027769:7831-7850 Msa1435770:intron 25.0%
!! AAGTCTTCTAAAAAGAAAAG+TGG - tig0027769:7987-8006 Msa1435770:intron 25.0%
! TAATATAAGTAAGAGTGAAG+AGG - tig0027769:8100-8119 Msa1435770:intron 25.0%
! AAAAAGAATAAGAAGAAGAG+TGG - tig0027769:8146-8165 Msa1435770:intron 25.0%
! AAAAGAATAAGAAGAAGAGT+GGG - tig0027769:8147-8166 Msa1435770:intron 25.0%
!!! CTTCTTTTTCTTCTTTTTTG+CGG + tig0027769:8360-8379 None:intergenic 25.0%
! AAAGAAGAAGGAAAAAGAAA+AGG - tig0027769:8373-8392 Msa1435770:intron 25.0%
! AGAAAAAAAGAAAAAGGAAG+AGG - tig0027769:8571-8590 Msa1435770:intron 25.0%
! TAGAAAGAAGGAAAAAGAAA+AGG - tig0027769:8670-8689 Msa1435770:CDS 25.0%
!!! TGATAAATAGGTTTTTTGGA+TGG + tig0027769:8836-8855 None:intergenic 25.0%
!!! TGTCTGATAAATAGGTTTTT+TGG + tig0027769:8840-8859 None:intergenic 25.0%
! CTATTTATCAGACAAAGAAA+GGG - tig0027769:8846-8865 Msa1435770:intron 25.0%
! TAAAATTCTAACACTAGAGT+AGG + tig0027769:9348-9367 None:intergenic 25.0%
!!! TGCTACTTTGGAATATTTTA+TGG - tig0027769:9382-9401 Msa1435770:CDS 25.0%
!!! GTTTTTGAATTTTTTTCTGC+TGG - tig0027769:9416-9435 Msa1435770:CDS 25.0%
! AAGAAATAGAAATACAGTGT+TGG + tig0027769:9605-9624 None:intergenic 25.0%
!! TCTATGTGATATTGCAATTT+TGG - tig0027769:10305-10324 Msa1435770:intron 25.0%
! CACTCAATCTATTAAAAATG+AGG - tig0027769:10370-10389 Msa1435770:intron 25.0%
! ATTCATTGTTGCATTGAATA+AGG - tig0027769:10401-10420 Msa1435770:intron 25.0%
!!! TTTTTGTTTTTGGTAAGTTG+TGG - tig0027769:10633-10652 Msa1435770:CDS 25.0%
! TGTAGCATTGTATTACAAAA+GGG - tig0027769:10845-10864 Msa1435770:intron 25.0%
!!! AATAGTGTTGACGATAATAT+AGG - tig0027769:11069-11088 Msa1435770:intron 25.0%
!!! TCAATTATTTTGTTGGTAAC+AGG - tig0027769:11141-11160 Msa1435770:intron 25.0%
!! TTTTCACTATCATTAGAAAG+AGG - tig0027769:11197-11216 Msa1435770:intron 25.0%
! ATTTAATATTTCAGTGGTGA+AGG - tig0027769:11453-11472 Msa1435770:intron 25.0%
! CTAATAGTAATAACATATCC+GGG + tig0027769:11482-11501 None:intergenic 25.0%
! TGTTATTACTATTAGTTCAG+TGG - tig0027769:11487-11506 Msa1435770:intron 25.0%
! CAAATAACAGTTAAACAGTT+AGG + tig0027769:11620-11639 None:intergenic 25.0%
! AAAGCAAGTATTAATACATG+TGG + tig0027769:11788-11807 None:intergenic 25.0%
! ATCGAATGCAAAAGATATAA+TGG + tig0027769:11911-11930 None:intergenic 25.0%
!!! CATTCGATTTATTTTAAAGC+TGG - tig0027769:11923-11942 Msa1435770:CDS 25.0%
!!! GATTTATTTTAAAGCTGGTT+TGG - tig0027769:11928-11947 Msa1435770:CDS 25.0%
! AAGGGATTTAGAAATTTGAA+TGG - tig0027769:11959-11978 Msa1435770:CDS 25.0%
! AGGGATTTAGAAATTTGAAT+GGG - tig0027769:11960-11979 Msa1435770:CDS 25.0%
! TTATGAGATGTTTAACATGA+AGG - tig0027769:12030-12049 Msa1435770:CDS 25.0%
!! ATTTTTCCATCATTGGAATT+TGG - tig0027769:12113-12132 Msa1435770:CDS 25.0%
!! AATTTGGAATATGTCAATTG+AGG - tig0027769:12129-12148 Msa1435770:CDS 25.0%
!! ATTTGGAATATGTCAATTGA+GGG - tig0027769:12130-12149 Msa1435770:CDS 25.0%
! ATCAATATCATTAAGTACCT+GGG + tig0027769:12311-12330 None:intergenic 25.0%
! TATGCCAGTTTATATAACTA+TGG - tig0027769:12339-12358 Msa1435770:intron 25.0%
!!! ATATGATTTCTTGCTATTTC+AGG - tig0027769:12408-12427 Msa1435770:intron 25.0%
!!! TATGATTTCTTGCTATTTCA+GGG - tig0027769:12409-12428 Msa1435770:intron 25.0%
! ATATATTCCAAATCATCATC+AGG + tig0027769:12478-12497 None:intergenic 25.0%
! ATATATTAAAAAGGCAGCTT+TGG - tig0027769:12492-12511 Msa1435770:intron 25.0%
! CAACTAATGAATTTATACCA+AGG + tig0027769:13088-13107 None:intergenic 25.0%
!! AAATGAGGAGATAGAAATTT+TGG - tig0027769:13199-13218 Msa1435770:CDS 25.0%
!! AACATTTTTACTGTATCAGA+AGG + tig0027769:13239-13258 None:intergenic 25.0%
! TATCTCAAACTTCGTTTAAT+GGG + tig0027769:13580-13599 None:intergenic 25.0%
! ATATCTCAAACTTCGTTTAA+TGG + tig0027769:13581-13600 None:intergenic 25.0%
!! ATTAAACGAAGTTTGAGATA+TGG - tig0027769:13580-13599 Msa1435770:CDS 25.0%
! TGAAATTTATGTTCCAAAAG+TGG + tig0027769:14252-14271 None:intergenic 25.0%
!! AAAAAATTCACAGAAGTACA+TGG - tig0027769:14336-14355 Msa1435770:CDS 25.0%
!! AAAATACTCCTCTTTTTCTT+AGG - tig0027769:14445-14464 Msa1435770:CDS 25.0%
! GTAAAAAATTGACCCAAAAA+AGG - tig0027769:14480-14499 Msa1435770:CDS 25.0%
! GTTAAATGAGTAATGATAAC+TGG + tig0027769:14558-14577 None:intergenic 25.0%
! TACCATTGAATTATTGACAT+AGG - tig0027769:14615-14634 Msa1435770:CDS 25.0%
! ATCCTATGTCAATAATTCAA+TGG + tig0027769:14620-14639 None:intergenic 25.0%
! TTTAGTGAATTCAAACTATC+AGG + tig0027769:15302-15321 None:intergenic 25.0%
TATAAAAACACAGTAGCGAA+TGG + tig0027769:6872-6891 None:intergenic 30.0%
AAAACGAAAATTGCTTTGTG+CGG + tig0027769:6938-6957 None:intergenic 30.0%
ATTTGTGTAAAAGGGGAAAA+TGG + tig0027769:7006-7025 None:intergenic 30.0%
GTACGAAATTTGTGTAAAAG+GGG + tig0027769:7013-7032 None:intergenic 30.0%
CGTACGAAATTTGTGTAAAA+GGG + tig0027769:7014-7033 None:intergenic 30.0%
TCGTACGAAATTTGTGTAAA+AGG + tig0027769:7015-7034 None:intergenic 30.0%
GAAAACCCTAATCTCATAAA+TGG - tig0027769:7053-7072 Msa1435770:three_prime_UTR 30.0%
AAACCCTAATCTCATAAATG+GGG - tig0027769:7055-7074 Msa1435770:three_prime_UTR 30.0%
GATGACGATGAATATTCTAT+CGG - tig0027769:7162-7181 Msa1435770:three_prime_UTR 30.0%
! TTTCTTACCTTTCTTTTTCC+CGG + tig0027769:7238-7257 None:intergenic 30.0%
!!! GTGAATGAAATTGTTTTTGC+TGG - tig0027769:7330-7349 Msa1435770:three_prime_UTR 30.0%
! TTTTTGCTGGGAAGAAAAAA+GGG - tig0027769:7343-7362 Msa1435770:three_prime_UTR 30.0%
AAAGGGAAATCGAAAAAAAG+TGG - tig0027769:7360-7379 Msa1435770:three_prime_UTR 30.0%
TTCATTGAGTAAAGCTATTC+CGG - tig0027769:7872-7891 Msa1435770:intron 30.0%
! GATGTTTCTTTTGCATTTAC+TGG - tig0027769:7957-7976 Msa1435770:intron 30.0%
ATATTACCATTGTCAACACT+AGG + tig0027769:8086-8105 None:intergenic 30.0%
!! GTCTTCGAATCATTTTTCTT+CGG + tig0027769:8476-8495 None:intergenic 30.0%
GGCTGAAGAAAAAAAGAAAA+AGG - tig0027769:8565-8584 Msa1435770:intron 30.0%
CCTTTCTTTGTCTGATAAAT+AGG + tig0027769:8848-8867 None:intergenic 30.0%
CCTATTTATCAGACAAAGAA+AGG - tig0027769:8845-8864 Msa1435770:intron 30.0%
ACAACGAATCGAAATCATAA+TGG - tig0027769:8872-8891 Msa1435770:intron 30.0%
ATGATGTCAATCTGAATGAT+AGG - tig0027769:9080-9099 Msa1435770:intron 30.0%
TGATGTCAATCTGAATGATA+GGG - tig0027769:9081-9100 Msa1435770:intron 30.0%
!!! TCTTTTTTGACAATTGGTTC+AGG + tig0027769:9139-9158 None:intergenic 30.0%
AAGTTTCAAGCATAAATGTC+AGG + tig0027769:9230-9249 None:intergenic 30.0%
! CTTGATACCATATCAGTTTT+GGG - tig0027769:9270-9289 Msa1435770:CDS 30.0%
ATATATTTCCTATGCTAGTG+AGG + tig0027769:9322-9341 None:intergenic 30.0%
TTGTAACCTAATAATGTCAC+CGG - tig0027769:9469-9488 Msa1435770:CDS 30.0%
! ATTTACTAGTTTATTGCAGC+CGG + tig0027769:9491-9510 None:intergenic 30.0%
CAGGTCAATCAAACATTATT+AGG + tig0027769:9745-9764 None:intergenic 30.0%
AATAATGTTTGATTGACCTG+CGG - tig0027769:9745-9764 Msa1435770:intron 30.0%
AGAAACTGAAGATAGAAAAC+AGG - tig0027769:9939-9958 Msa1435770:intron 30.0%
TGGTTGAGGATAAAAAGAAA+AGG - tig0027769:9971-9990 Msa1435770:intron 30.0%
TTCAGAATGAGTTCAATATG+AGG - tig0027769:10584-10603 Msa1435770:intron 30.0%
TCAGAATGAGTTCAATATGA+GGG - tig0027769:10585-10604 Msa1435770:intron 30.0%
AATACAATGCTACACAAAAG+AGG + tig0027769:10839-10858 None:intergenic 30.0%
GTGTAGCATTGTATTACAAA+AGG - tig0027769:10844-10863 Msa1435770:intron 30.0%
GTAGGCATCTTAAAAAATGT+AGG + tig0027769:11113-11132 None:intergenic 30.0%
AGACAAGTTAGACACAATTT+GGG + tig0027769:11285-11304 None:intergenic 30.0%
TCATCCAAAGGATGATAATT+TGG - tig0027769:11320-11339 Msa1435770:intron 30.0%
! TGAATGCCAAATCTTTGTTT+CGG - tig0027769:11356-11375 Msa1435770:CDS 30.0%
TAATCTGCTGAATACTTTGT+CGG - tig0027769:11407-11426 Msa1435770:CDS 30.0%
! GTTTAACTGTTATTTGACTG+TGG - tig0027769:11624-11643 Msa1435770:CDS 30.0%
AATAACCTTGACTTCCAAAA+CGG + tig0027769:11661-11680 None:intergenic 30.0%
TTAATGGTGTTCTTCATGAA+GGG - tig0027769:11715-11734 Msa1435770:intron 30.0%
TAGAAATTTGAATGGGTCAA+TGG - tig0027769:11967-11986 Msa1435770:CDS 30.0%
AAATAACGTGTTAGAAGCTT+AGG - tig0027769:12001-12020 Msa1435770:CDS 30.0%
!! CAACTATACTTGCTATAACT+CGG + tig0027769:12058-12077 None:intergenic 30.0%
CATATTCCAAATTCCAATGA+TGG + tig0027769:12122-12141 None:intergenic 30.0%
! TTTGGAATATGTCAATTGAG+GGG - tig0027769:12131-12150 Msa1435770:CDS 30.0%
AAATATAGCTCCTCTGTTAA+AGG + tig0027769:12186-12205 None:intergenic 30.0%
AGTAATGGTTGTCTAATTTC+AGG - tig0027769:12231-12250 Msa1435770:CDS 30.0%
GTAATGGTTGTCTAATTTCA+GGG - tig0027769:12232-12251 Msa1435770:CDS 30.0%
AAAGAAATCAAAGCTGCTAT+GGG - tig0027769:12271-12290 Msa1435770:intron 30.0%
GATCAATATCATTAAGTACC+TGG + tig0027769:12312-12331 None:intergenic 30.0%
!! ATGATTTCTTGCTATTTCAG+GGG - tig0027769:12410-12429 Msa1435770:intron 30.0%
!! TTTCTTTTCAAGCATTACAC+TGG + tig0027769:12692-12711 None:intergenic 30.0%
! GGGTGTGAAAATTTTTATAG+CGG - tig0027769:12783-12802 Msa1435770:intron 30.0%
! TGATCAATTTAAGGCTTACA+TGG - tig0027769:12825-12844 Msa1435770:intron 30.0%
TTCTTGTTGAAGACACAATT+TGG + tig0027769:12922-12941 None:intergenic 30.0%
AAATTGTGTCTTCAACAAGA+AGG - tig0027769:12921-12940 Msa1435770:intron 30.0%
ATATCAACTCCCAAAACAAT+CGG + tig0027769:12949-12968 None:intergenic 30.0%
!!! TATCCTTGAAGGCATTTTAA+AGG - tig0027769:12966-12985 Msa1435770:CDS 30.0%
!! ATACCTTTAAAATGCCTTCA+AGG + tig0027769:12972-12991 None:intergenic 30.0%
!!! CAGATGAACTTTTTTCAATG+TGG - tig0027769:13010-13029 Msa1435770:CDS 30.0%
CTTGCATCTGTATTTGAAAA+AGG - tig0027769:13123-13142 Msa1435770:CDS 30.0%
! TGTTCAATGCACAATTTGTT+TGG - tig0027769:13335-13354 Msa1435770:CDS 30.0%
TCTGTCAAGTAGACAATATT+AGG + tig0027769:13377-13396 None:intergenic 30.0%
ATATTGTCTACTTGACAGAT+TGG - tig0027769:13378-13397 Msa1435770:CDS 30.0%
ACCAATATCAATGAACTCTT+GGG + tig0027769:13424-13443 None:intergenic 30.0%
TTTATGGTTATTCTCAATGG+AGG + tig0027769:13454-13473 None:intergenic 30.0%
CATTGAGAATAACCATAAAC+CGG - tig0027769:13455-13474 Msa1435770:CDS 30.0%
AATTCAAGCACATACCTTAA+TGG + tig0027769:13511-13530 None:intergenic 30.0%
ATCTCAAACTTCGTTTAATG+GGG + tig0027769:13579-13598 None:intergenic 30.0%
!!! ATCCATTTTCACTGATTTAC+AGG - tig0027769:13734-13753 Msa1435770:CDS 30.0%
AACTTGTAAGCCATATTTCA+CGG - tig0027769:13915-13934 Msa1435770:CDS 30.0%
!!! ACGGTAACAGTACAATTTTT+TGG - tig0027769:14099-14118 Msa1435770:CDS 30.0%
! TGGTTATGCTTTGCATTTTT+CGG + tig0027769:14298-14317 None:intergenic 30.0%
ACATATACCACACCTTTATA+CGG + tig0027769:14516-14535 None:intergenic 30.0%
! AAGGTTTTCAGTGAAATGTT+CGG - tig0027769:14750-14769 Msa1435770:CDS 30.0%
TGATTTACTATACACATCTG+TGG - tig0027769:14955-14974 Msa1435770:CDS 30.0%
TGAGAGAAAGCAAATATTCA+CGG - tig0027769:15020-15039 Msa1435770:CDS 30.0%
GAACACCAAATGTATACAAA+TGG + tig0027769:15096-15115 None:intergenic 30.0%
!!! ATGCTTTGCATTTTGGTTTT+GGG - tig0027769:15117-15136 Msa1435770:five_prime_UTR 30.0%
TTTCAATGTAACAGCGAAAG+AGG + tig0027769:6967-6986 None:intergenic 35.0%
CTTCCCCATTTATGAGATTA+GGG + tig0027769:7061-7080 None:intergenic 35.0%
TCTTCCCCATTTATGAGATT+AGG + tig0027769:7062-7081 None:intergenic 35.0%
AAAATCAAAGAAGAAGGCTC+CGG - tig0027769:7134-7153 Msa1435770:three_prime_UTR 35.0%
TATTCATCGTCATCGATAAC+CGG + tig0027769:7156-7175 None:intergenic 35.0%
! TTCTTACCTTTCTTTTTCCC+GGG + tig0027769:7237-7256 None:intergenic 35.0%
GGGAAAAAGAAAGGTAAGAA+AGG - tig0027769:7237-7256 Msa1435770:three_prime_UTR 35.0%
! GTTTTTGCTGGGAAGAAAAA+AGG - tig0027769:7342-7361 Msa1435770:three_prime_UTR 35.0%
AAATCGAAAAAAAGTGGTGG+TGG - tig0027769:7366-7385 Msa1435770:three_prime_UTR 35.0%
!! TGATAATGGTGAGGAGAAAT+CGG - tig0027769:7641-7660 Msa1435770:intron 35.0%
!!! GGATGAACCTGTTGTTTTTT+CGG - tig0027769:7668-7687 Msa1435770:intron 35.0%
!!! GATGAACCTGTTGTTTTTTC+GGG - tig0027769:7669-7688 Msa1435770:intron 35.0%
!!! ATGAACCTGTTGTTTTTTCG+GGG - tig0027769:7670-7689 Msa1435770:intron 35.0%
GCATTAGATGAGAATGATGA+TGG - tig0027769:7744-7763 Msa1435770:intron 35.0%
AGAGGAGAGTAAGAATGAAA+AGG - tig0027769:7770-7789 Msa1435770:intron 35.0%
TGATGAACCAATCACTTTCT+CGG - tig0027769:7806-7825 Msa1435770:intron 35.0%
TGAGTGATGAAATCGAGTTT+GGG - tig0027769:8027-8046 Msa1435770:intron 35.0%
! GAGTGAAAGTGTAAATGTTG+TGG - tig0027769:8049-8068 Msa1435770:intron 35.0%
! TGAAAGTGTAAATGTTGTGG+AGG - tig0027769:8052-8071 Msa1435770:intron 35.0%
GGAAAAAGAAAAGGAGAAGA+AGG - tig0027769:8382-8401 Msa1435770:intron 35.0%
TCTTCTACAGCTTCAATTAC+CGG + tig0027769:8434-8453 None:intergenic 35.0%
AAATGATTCGAAGACCAAAG+CGG - tig0027769:8481-8500 Msa1435770:intron 35.0%
CAGGAAGGTAAATTGTTAAC+TGG - tig0027769:8713-8732 Msa1435770:CDS 35.0%
!! AGATGAAAGTGTTGAAGCAA+CGG - tig0027769:8913-8932 Msa1435770:intron 35.0%
!! TACTGCTGATTTAGATTCAG+AGG - tig0027769:8940-8959 Msa1435770:intron 35.0%
ACTACTTCTTCAACAACTTC+AGG + tig0027769:9013-9032 None:intergenic 35.0%
TGAAGTTGTTGAAGAAGTAG+TGG - tig0027769:9012-9031 Msa1435770:intron 35.0%
! ATGATGATGTTGAGGATGAA+TGG - tig0027769:9041-9060 Msa1435770:intron 35.0%
! TGATGATGTTGAGGATGAAT+GGG - tig0027769:9042-9061 Msa1435770:intron 35.0%
GATGTCAATCTGAATGATAG+GGG - tig0027769:9082-9101 Msa1435770:intron 35.0%
!! AACTCACCAGCATTTTTAGA+AGG + tig0027769:9178-9197 None:intergenic 35.0%
! TGGTGAGTTTTGCATTCTAT+TGG - tig0027769:9189-9208 Msa1435770:CDS 35.0%
! GCTTGATACCATATCAGTTT+TGG - tig0027769:9269-9288 Msa1435770:CDS 35.0%
AATAGGACCCAAAACTGATA+TGG + tig0027769:9280-9299 None:intergenic 35.0%
CGAAAAAACCAAGAAGCAAT+AGG + tig0027769:9297-9316 None:intergenic 35.0%
TGGTTTCAAACCTGGAATTA+TGG - tig0027769:9549-9568 Msa1435770:CDS 35.0%
TTTATCACTGCCATAATTCC+AGG + tig0027769:9562-9581 None:intergenic 35.0%
! TGGCAGTGATAAAATTTTCC+TGG - tig0027769:9569-9588 Msa1435770:CDS 35.0%
!! AGTGTTGGCAAATATAAACC+AGG + tig0027769:9590-9609 None:intergenic 35.0%
ATACAGGGAGATCTAATACT+TGG + tig0027769:9684-9703 None:intergenic 35.0%
ACTTGACACAGACAAAAGTT+TGG + tig0027769:9720-9739 None:intergenic 35.0%
! AAACTTTTGTCTGTGTCAAG+TGG - tig0027769:9719-9738 Msa1435770:intron 35.0%
TTTATCCTCAACCACAACTT+TGG + tig0027769:9965-9984 None:intergenic 35.0%
ACGAGTCATTCAATAACTTG+AGG - tig0027769:10268-10287 Msa1435770:CDS 35.0%
CATTCAATAACTTGAGGTCT+CGG - tig0027769:10274-10293 Msa1435770:CDS 35.0%
ATTCAATAACTTGAGGTCTC+GGG - tig0027769:10275-10294 Msa1435770:CDS 35.0%
!! TGATATTGCAATTTTGGTCG+TGG - tig0027769:10311-10330 Msa1435770:intron 35.0%
TTGAGTGACTCTATAGTTTG+TGG + tig0027769:10357-10376 None:intergenic 35.0%
! TGTGTCATTGCTTTACGAAT+TGG + tig0027769:10550-10569 None:intergenic 35.0%
AGTTACCTTATTGCACTTGT+AGG + tig0027769:10794-10813 None:intergenic 35.0%
!! AAAGAGGTATTATGGCTACA+AGG + tig0027769:10823-10842 None:intergenic 35.0%
!! GCTACACAAAAGAGGTATTA+TGG + tig0027769:10831-10850 None:intergenic 35.0%
ACCATATTGATGTTCCAGAT+GGG - tig0027769:10901-10920 Msa1435770:intron 35.0%
TTCATGTGACTAAAAAGCTG+TGG + tig0027769:10959-10978 None:intergenic 35.0%
TACATATGTAATCGCCTCAA+CGG + tig0027769:10994-11013 None:intergenic 35.0%
ACAATTCAACATCCTAGCAT+TGG + tig0027769:11030-11049 None:intergenic 35.0%
!!! CAGAACATCTCAGCTTTTTT+TGG - tig0027769:11254-11273 Msa1435770:intron 35.0%
ACAAGTTAGACACAATTTGG+GGG + tig0027769:11283-11302 None:intergenic 35.0%
GACAAGTTAGACACAATTTG+GGG + tig0027769:11284-11303 None:intergenic 35.0%
CAGACAAGTTAGACACAATT+TGG + tig0027769:11286-11305 None:intergenic 35.0%
CCTACCAAATTATCATCCTT+TGG + tig0027769:11327-11346 None:intergenic 35.0%
CCAAAGGATGATAATTTGGT+AGG - tig0027769:11324-11343 Msa1435770:intron 35.0%
! GAATGCCAAATCTTTGTTTC+GGG - tig0027769:11357-11376 Msa1435770:CDS 35.0%
! TTTTGCCCGAAACAAAGATT+TGG + tig0027769:11365-11384 None:intergenic 35.0%
TTGGAAGTCAAGGTTATTGA+AGG - tig0027769:11663-11682 Msa1435770:intron 35.0%
CAACATCAATAGTAGTTCCA+TGG + tig0027769:11689-11708 None:intergenic 35.0%
GTTAATGGTGTTCTTCATGA+AGG - tig0027769:11714-11733 Msa1435770:intron 35.0%
TAATGGTGTTCTTCATGAAG+GGG - tig0027769:11716-11735 Msa1435770:intron 35.0%
! AATAGTTGTATCTGGAATGC+AGG - tig0027769:11743-11762 Msa1435770:CDS 35.0%
TGTCAATAAAGCTCGAATTG+TGG + tig0027769:11855-11874 None:intergenic 35.0%
TTAACACGAAGTTCCTTCAT+TGG + tig0027769:11884-11903 None:intergenic 35.0%
AATGAAGGAACTTCGTGTTA+AGG - tig0027769:11883-11902 Msa1435770:CDS 35.0%
!!! ATTTTAAAGCTGGTTTGGGT+AGG - tig0027769:11933-11952 Msa1435770:CDS 35.0%
AAATTTGAATGGGTCAATGG+AGG - tig0027769:11970-11989 Msa1435770:CDS 35.0%
CTCATATTGTTATGCTGAAG+AGG - tig0027769:12085-12104 Msa1435770:CDS 35.0%
ATATTGTTATGCTGAAGAGG+TGG - tig0027769:12088-12107 Msa1435770:CDS 35.0%
AATATGTCAATTGAGGGGAT+GGG - tig0027769:12136-12155 Msa1435770:CDS 35.0%
AAACATCCTCTTTAGTCTGA+GGG - tig0027769:12159-12178 Msa1435770:CDS 35.0%
TATGTCTTCCAGCTAAGTAA+TGG - tig0027769:12216-12235 Msa1435770:CDS 35.0%
TTAGACAACCATTACTTAGC+TGG + tig0027769:12227-12246 None:intergenic 35.0%
! CAGCTTTGATTTCTTTGTGA+TGG + tig0027769:12267-12286 None:intergenic 35.0%
CAAAGAAATCAAAGCTGCTA+TGG - tig0027769:12270-12289 Msa1435770:intron 35.0%
CTAACAGGAATATTCACTTC+TGG + tig0027769:12625-12644 None:intergenic 35.0%
CCTATGTTTATAGCACTAAC+AGG + tig0027769:12640-12659 None:intergenic 35.0%
CCTGTTAGTGCTATAAACAT+AGG - tig0027769:12637-12656 Msa1435770:intron 35.0%
! ACGAGAGTATGCTACTATAT+TGG - tig0027769:12711-12730 Msa1435770:intron 35.0%
TTACATGGACAACATTAAGG+AGG - tig0027769:12840-12859 Msa1435770:intron 35.0%
GGAGAAAAAGAAAGAATCTG+CGG - tig0027769:12861-12880 Msa1435770:intron 35.0%
GTAAGATCTTCAGAACACAT+GGG + tig0027769:12900-12919 None:intergenic 35.0%
! AAGAAGGATCCGATTGTTTT+GGG - tig0027769:12937-12956 Msa1435770:intron 35.0%
TAAGATTGTATTGCTTGCCT+TGG - tig0027769:13068-13087 Msa1435770:CDS 35.0%
TATGGCCTATGGATAAGTTT+AGG - tig0027769:13164-13183 Msa1435770:CDS 35.0%
TGTGCATTGAACACATAACA+GGG + tig0027769:13328-13347 None:intergenic 35.0%
TTGTGCATTGAACACATAAC+AGG + tig0027769:13329-13348 None:intergenic 35.0%
TATCAATGAACTCTTGGGAA+GGG + tig0027769:13419-13438 None:intergenic 35.0%
ATATCAATGAACTCTTGGGA+AGG + tig0027769:13420-13439 None:intergenic 35.0%
TCCCAAGAGTTCATTGATAT+TGG - tig0027769:13420-13439 Msa1435770:CDS 35.0%
GACCAATATCAATGAACTCT+TGG + tig0027769:13425-13444 None:intergenic 35.0%
CGGTTTATGGTTATTCTCAA+TGG + tig0027769:13457-13476 None:intergenic 35.0%
!! AACTAACTTGTTTACACCGA+TGG - tig0027769:13702-13721 Msa1435770:CDS 35.0%
!!! AATGGATGTCACTTTTCCAT+CGG + tig0027769:13721-13740 None:intergenic 35.0%
CACCTGTAAATCAGTGAAAA+TGG + tig0027769:13739-13758 None:intergenic 35.0%
!!! CATTTTCACTGATTTACAGG+TGG - tig0027769:13737-13756 Msa1435770:CDS 35.0%
GAAGAACAGCAGAAAATGTT+CGG - tig0027769:13869-13888 Msa1435770:CDS 35.0%
AAGAACAGCAGAAAATGTTC+GGG - tig0027769:13870-13889 Msa1435770:CDS 35.0%
CAATAGATCTCCGTGAAATA+TGG + tig0027769:13928-13947 None:intergenic 35.0%
GTGTTGAGTTATCATTACTC+TGG + tig0027769:14031-14050 None:intergenic 35.0%
CCTTAATGCAGTAGTGAAAT+TGG + tig0027769:14209-14228 None:intergenic 35.0%
CCAATTTCACTACTGCATTA+AGG - tig0027769:14206-14225 Msa1435770:CDS 35.0%
TCGGGTTAATATAGTCAAAG+TGG + tig0027769:14279-14298 None:intergenic 35.0%
! GGTTATGCTTTGCATTTTTC+GGG + tig0027769:14297-14316 None:intergenic 35.0%
TGAAATGTTCGGTATAATGC+CGG - tig0027769:14761-14780 Msa1435770:CDS 35.0%
ATACACATCTGTGGTATACA+TGG - tig0027769:14964-14983 Msa1435770:CDS 35.0%
GAGAGAAAGCAAATATTCAC+GGG - tig0027769:15021-15040 Msa1435770:CDS 35.0%
CAAAACCAAAATGCAAAGCA+TGG + tig0027769:15118-15137 None:intergenic 35.0%
!!! CATGCTTTGCATTTTGGTTT+TGG - tig0027769:15116-15135 Msa1435770:five_prime_UTR 35.0%
!!! TTGCATTTTGGTTTTGGGAA+CGG - tig0027769:15122-15141 Msa1435770:five_prime_UTR 35.0%
! TGCAGCATATACTTTTCACA+TGG - tig0027769:15192-15211 Msa1435770:five_prime_UTR 35.0%
ATTGGACGATTTCTGTTCAA+AGG + tig0027769:15264-15283 None:intergenic 35.0%
AGGACAGAAATTGTCATCAT+TGG + tig0027769:15282-15301 None:intergenic 35.0%
CGGTGGAAAATCAAAGAAGA+AGG - tig0027769:7128-7147 Msa1435770:three_prime_UTR 40.0%
CGATGAATATTCTATCGGAG+TGG - tig0027769:7167-7186 Msa1435770:three_prime_UTR 40.0%
TGAATATTCTATCGGAGTGG+AGG - tig0027769:7170-7189 Msa1435770:three_prime_UTR 40.0%
GGGAAATCGAAAAAAAGTGG+TGG - tig0027769:7363-7382 Msa1435770:three_prime_UTR 40.0%
AGTGTGTTTGCTTCTGGATT+TGG - tig0027769:7402-7421 Msa1435770:three_prime_UTR 40.0%
! TGATGATGAAGAGAAATCGG+AGG - tig0027769:7455-7474 Msa1435770:CDS 40.0%
!! AACCGGTTGTTAGCTTTACA+GGG - tig0027769:7508-7527 Msa1435770:intron 40.0%
TTCCCTGTAAAGCTAACAAC+CGG + tig0027769:7513-7532 None:intergenic 40.0%
TTCTTCCCCGAAAAAACAAC+AGG + tig0027769:7678-7697 None:intergenic 40.0%
!! TGAGAATGATGATGGAGAAG+AGG - tig0027769:7752-7771 Msa1435770:intron 40.0%
GATGAACCAATCACTTTCTC+GGG - tig0027769:7807-7826 Msa1435770:intron 40.0%
TTCTTACCCGAGAAAGTGAT+TGG + tig0027769:7816-7835 None:intergenic 40.0%
ATTGAGTAAAGCTATTCCGG+AGG - tig0027769:7875-7894 Msa1435770:intron 40.0%
TCTGTATCTGAGTCTGCTAA+AGG - tig0027769:7909-7928 Msa1435770:intron 40.0%
! TGGTGATGATGAGAAAGATG+AGG - tig0027769:7932-7951 Msa1435770:intron 40.0%
CTCGATTTCATCACTCACTT+TGG + tig0027769:8024-8043 None:intergenic 40.0%
GTGAGTGATGAAATCGAGTT+TGG - tig0027769:8026-8045 Msa1435770:intron 40.0%
AGAATAAGAAGAAGAGTGGG+AGG - tig0027769:8150-8169 Msa1435770:intron 40.0%
TGAACTTTATCATCCTGCTG+AGG + tig0027769:8260-8279 None:intergenic 40.0%
!! AGAAAGTGCCAAAGCATGTT+AGG - tig0027769:8510-8529 Msa1435770:intron 40.0%
!! GAAAGTGCCAAAGCATGTTA+GGG - tig0027769:8511-8530 Msa1435770:intron 40.0%
! ACTACTGGCTAGAAGAAAAG+AGG - tig0027769:8544-8563 Msa1435770:intron 40.0%
GAAGCAAAGGAAAGAAGAAG+AGG - tig0027769:8598-8617 Msa1435770:intron 40.0%
AGAGGCTAAACGTAGAAAGA+AGG - tig0027769:8658-8677 Msa1435770:CDS 40.0%
GAAACTCCTGAAAAAGAAGC+AGG - tig0027769:8694-8713 Msa1435770:CDS 40.0%
! TACCTTCCTGCTTCTTTTTC+AGG + tig0027769:8703-8722 None:intergenic 40.0%
AGATTCAGAGGAACCTGAAA+AGG - tig0027769:8952-8971 Msa1435770:intron 40.0%
ACCTGAAAAGGTTGAAGAAG+TGG - tig0027769:8964-8983 Msa1435770:intron 40.0%
! TCCACTTCTTCAACCTTTTC+AGG + tig0027769:8968-8987 None:intergenic 40.0%
AAAGGTTGAAGAAGTGGAGA+TGG - tig0027769:8970-8989 Msa1435770:intron 40.0%
! GGATGAAGATGATGATGTTG+AGG - tig0027769:9033-9052 Msa1435770:intron 40.0%
ATGAATGGGATGCAAAAAGC+TGG - tig0027769:9056-9075 Msa1435770:intron 40.0%
TGAATGGGATGCAAAAAGCT+GGG - tig0027769:9057-9076 Msa1435770:intron 40.0%
! TTTGACAATTGGTTCAGGCT+CGG + tig0027769:9134-9153 None:intergenic 40.0%
! GGCATACCTTCTAAAAATGC+TGG - tig0027769:9169-9188 Msa1435770:CDS 40.0%
!! TTTTGGGTCCTATTGCTTCT+TGG - tig0027769:9286-9305 Msa1435770:CDS 40.0%
! TTTTCGTACCTCACTAGCAT+AGG - tig0027769:9311-9330 Msa1435770:CDS 40.0%
AAACCAATTGCTGCAGTCAA+AGG + tig0027769:9535-9554 None:intergenic 40.0%
! CCTATGCTTATCTGAAGCAA+AGG + tig0027769:9628-9647 None:intergenic 40.0%
CCTTTGCTTCAGATAAGCAT+AGG - tig0027769:9625-9644 Msa1435770:CDS 40.0%
TAGATCTCCCTGTATCTTGT+AGG - tig0027769:9689-9708 Msa1435770:CDS 40.0%
!!! TTTGCTTTTTCTTCCACAGC+AGG - tig0027769:9880-9899 Msa1435770:CDS 40.0%
TTTATTTGTAGCACCTGCTG+TGG + tig0027769:9896-9915 None:intergenic 40.0%
TAGAAAACAGGCCAAAGTTG+TGG - tig0027769:9951-9970 Msa1435770:intron 40.0%
TACCAATGTTCAAGAAGGTG+AGG - tig0027769:10116-10135 Msa1435770:intron 40.0%
GAACATACGTGAAAGAACCA+AGG - tig0027769:10185-10204 Msa1435770:intron 40.0%
GTATCAATAACCAGTAGACC+GGG + tig0027769:10240-10259 None:intergenic 40.0%
GGTATCAATAACCAGTAGAC+CGG + tig0027769:10241-10260 None:intergenic 40.0%
TATTGAATGACTCGTGTCCT+GGG + tig0027769:10263-10282 None:intergenic 40.0%
TTATTGAATGACTCGTGTCC+TGG + tig0027769:10264-10283 None:intergenic 40.0%
TTCAATAACTTGAGGTCTCG+GGG - tig0027769:10276-10295 Msa1435770:CDS 40.0%
CTAGATTGTCACTCAGTTCA+AGG - tig0027769:10703-10722 Msa1435770:intron 40.0%
TCACTCAGTTCAAGGAACAA+GGG - tig0027769:10711-10730 Msa1435770:intron 40.0%
TTGTGCCTACAAGTGCAATA+AGG - tig0027769:10786-10805 Msa1435770:intron 40.0%
!! ATCAATATGGTGGTTGGTAG+GGG + tig0027769:10892-10911 None:intergenic 40.0%
! CATCAATATGGTGGTTGGTA+GGG + tig0027769:10893-10912 None:intergenic 40.0%
ACATCAATATGGTGGTTGGT+AGG + tig0027769:10894-10913 None:intergenic 40.0%
TGGAACATCAATATGGTGGT+TGG + tig0027769:10898-10917 None:intergenic 40.0%
! CATCTGGAACATCAATATGG+TGG + tig0027769:10902-10921 None:intergenic 40.0%
CACCATATTGATGTTCCAGA+TGG - tig0027769:10900-10919 Msa1435770:intron 40.0%
! TCCCATCTGGAACATCAATA+TGG + tig0027769:10905-10924 None:intergenic 40.0%
GGAAAACAAAATCTCCCATC+TGG + tig0027769:10918-10937 None:intergenic 40.0%
AAAGCTGTGGATTTGAGTCT+TGG + tig0027769:10946-10965 None:intergenic 40.0%
! TCTTTTGTAGTGCCAATGCT+AGG - tig0027769:11015-11034 Msa1435770:intron 40.0%
CTCTACGTGAAATCATCCAA+AGG - tig0027769:11308-11327 Msa1435770:intron 40.0%
TGATAATTTGGTAGGAGCAG+AGG - tig0027769:11332-11351 Msa1435770:intron 40.0%
TTCGCTGTATGTAAGCTTCT+CGG + tig0027769:11529-11548 None:intergenic 40.0%
ACCACTTCAACATCAAGTGA+TGG + tig0027769:11566-11585 None:intergenic 40.0%
GGGGATCAAATAGTTGTATC+TGG - tig0027769:11735-11754 Msa1435770:CDS 40.0%
GCTCGAATTGTGGTAACAAT+TGG + tig0027769:11845-11864 None:intergenic 40.0%
ATTGACACCTCATCCAATGA+AGG - tig0027769:11868-11887 Msa1435770:CDS 40.0%
!!! GGTGGTCATTTTTCCATCAT+TGG - tig0027769:12106-12125 Msa1435770:CDS 40.0%
GAATATGTCAATTGAGGGGA+TGG - tig0027769:12135-12154 Msa1435770:CDS 40.0%
GAAACATCCTCTTTAGTCTG+AGG - tig0027769:12158-12177 Msa1435770:CDS 40.0%
AACATCCTCTTTAGTCTGAG+GGG - tig0027769:12160-12179 Msa1435770:CDS 40.0%
! TGCTGGAGCTAGTTTATATG+TGG - tig0027769:12447-12466 Msa1435770:intron 40.0%
! GGTAAAGCCTGATGATGATT+TGG - tig0027769:12468-12487 Msa1435770:intron 40.0%
TAATGCTTCCAATGAGCCAA+GGG + tig0027769:12584-12603 None:intergenic 40.0%
ATAATGCTTCCAATGAGCCA+AGG + tig0027769:12585-12604 None:intergenic 40.0%
!! TGGCTCATTGGAAGCATTAT+TGG - tig0027769:12585-12604 Msa1435770:intron 40.0%
TCACATCCTTCTTGTGTACA+GGG + tig0027769:12663-12682 None:intergenic 40.0%
ATCACATCCTTCTTGTGTAC+AGG + tig0027769:12664-12683 None:intergenic 40.0%
ACACAAGAAGGATGTGATGA+AGG - tig0027769:12666-12685 Msa1435770:intron 40.0%
TAGGGATCTTGCAGAAGAAT+TGG - tig0027769:12762-12781 Msa1435770:intron 40.0%
AGGGATCTTGCAGAAGAATT+GGG - tig0027769:12763-12782 Msa1435770:intron 40.0%
GGCTTACATGGACAACATTA+AGG - tig0027769:12837-12856 Msa1435770:intron 40.0%
AAAGAAAGAATCTGCGGATG+AGG - tig0027769:12867-12886 Msa1435770:intron 40.0%
GGTAAGATCTTCAGAACACA+TGG + tig0027769:12901-12920 None:intergenic 40.0%
! CAAGAAGGATCCGATTGTTT+TGG - tig0027769:12936-12955 Msa1435770:intron 40.0%
!! TTGGGAGTTGATATCCTTGA+AGG - tig0027769:12955-12974 Msa1435770:intron 40.0%
AGCAGCCTAAACTTATCCAT+AGG + tig0027769:13172-13191 None:intergenic 40.0%
TCTTGGGAAGGGATACAAAT+TGG + tig0027769:13408-13427 None:intergenic 40.0%
! TCGCATAATCAACCGGTTTA+TGG + tig0027769:13470-13489 None:intergenic 40.0%
CCTTTCTTCGCATAATCAAC+CGG + tig0027769:13477-13496 None:intergenic 40.0%
CGGTTGATTATGCGAAGAAA+GGG - tig0027769:13475-13494 Msa1435770:CDS 40.0%
GTACTATGATTGAGCGATGT+TGG - tig0027769:13621-13640 Msa1435770:CDS 40.0%
ATGATTGAGCGATGTTGGAA+AGG - tig0027769:13626-13645 Msa1435770:CDS 40.0%
AGGTGGTCTATCTTTAGACT+TGG - tig0027769:13754-13773 Msa1435770:CDS 40.0%
CAACTTCGTTTGCAGATTGT+TGG - tig0027769:13836-13855 Msa1435770:CDS 40.0%
TAAGCATGGTGAACAGTCAT+TGG + tig0027769:14078-14097 None:intergenic 40.0%
GACTGTTCACCATGCTTATA+CGG - tig0027769:14080-14099 Msa1435770:CDS 40.0%
GTACTGTTACCGTATAAGCA+TGG + tig0027769:14092-14111 None:intergenic 40.0%
AAGTACATGGATTCCGAAAG+TGG - tig0027769:14349-14368 Msa1435770:CDS 40.0%
GGTTAATGAAGTCGCGAAAT+TGG - tig0027769:14393-14412 Msa1435770:CDS 40.0%
!!! GGTGAACAGTACCCTTTTTT+GGG + tig0027769:14495-14514 None:intergenic 40.0%
GACATAGGATGATCTGACTA+TGG - tig0027769:14630-14649 Msa1435770:CDS 40.0%
ATAGGATGATCTGACTATGG+AGG - tig0027769:14633-14652 Msa1435770:CDS 40.0%
ATGATCTGACTATGGAGGAA+TGG - tig0027769:14638-14657 Msa1435770:CDS 40.0%
CACAAAAATCCCTCAAAGTC+CGG + tig0027769:14783-14802 None:intergenic 40.0%
!! GACTTTGAGGGATTTTTGTG+AGG - tig0027769:14783-14802 Msa1435770:CDS 40.0%
! ATTTTTGTGAGGATGCGGTT+GGG - tig0027769:14794-14813 Msa1435770:CDS 40.0%
TCTGCATCATTGCATCTACA+AGG + tig0027769:14824-14843 None:intergenic 40.0%
GATGCAATGATGCAGATAGA+AGG - tig0027769:14828-14847 Msa1435770:CDS 40.0%
GTTTCTTGTACAAGTCACTC+TGG + tig0027769:14866-14885 None:intergenic 40.0%
TGCTTTCTCTCATCGAACAA+AGG + tig0027769:15012-15031 None:intergenic 40.0%
! GTGTTCCATGCTTTGCATTT+TGG - tig0027769:15110-15129 Msa1435770:five_prime_UTR 40.0%
!!! TGCATTTTGGTTTTGGGAAC+GGG - tig0027769:15123-15142 Msa1435770:five_prime_UTR 40.0%
CATAGGTATGCATGCTTGTT+TGG - tig0027769:15146-15165 Msa1435770:five_prime_UTR 40.0%
! GTTGCTTTGCTTTGCCTCTA+GGG + tig0027769:6819-6838 None:intergenic 45.0%
! AGTTGCTTTGCTTTGCCTCT+AGG + tig0027769:6820-6839 None:intergenic 45.0%
AGAGGCAAAGCAAAGCAACT+TGG - tig0027769:6820-6839 Msa1435770:three_prime_UTR 45.0%
ACGAAAATTGCTTTGTGCGG+CGG + tig0027769:6935-6954 None:intergenic 45.0%
ATATTCTATCGGAGTGGAGG+AGG - tig0027769:7173-7192 Msa1435770:three_prime_UTR 45.0%
GAGAAACCCGGGAAAAAGAA+AGG - tig0027769:7228-7247 Msa1435770:three_prime_UTR 45.0%
!! AAAAGTGGTGGTGGTAGTAG+TGG - tig0027769:7375-7394 Msa1435770:three_prime_UTR 45.0%
!! ATTTGGTGTGCTTGGTGATG+AGG - tig0027769:7419-7438 Msa1435770:three_prime_UTR 45.0%
GAAGAGAAATCGGAGGTAAC+TGG - tig0027769:7462-7481 Msa1435770:CDS 45.0%
AAATCGGAGGTAACTGGTGA+GGG - tig0027769:7468-7487 Msa1435770:CDS 45.0%
!! GAACCGGTTGTTAGCTTTAC+AGG - tig0027769:7507-7526 Msa1435770:intron 45.0%
AGGGAAGAAGAAATCCTCGA+AGG - tig0027769:7527-7546 Msa1435770:intron 45.0%
GGGAAGAAGAAATCCTCGAA+GGG - tig0027769:7528-7547 Msa1435770:intron 45.0%
!! TGGTGGTGGAAGTGTGTTTA+CGG - tig0027769:7566-7585 Msa1435770:intron 45.0%
!!! CAGCTGGTTTTGGTTTGCTT+GGG - tig0027769:7592-7611 Msa1435770:intron 45.0%
!!! AGCTGGTTTTGGTTTGCTTG+GGG - tig0027769:7593-7612 Msa1435770:intron 45.0%
!!! TTTTGGTTTGCTTGGGGATG+AGG - tig0027769:7599-7618 Msa1435770:intron 45.0%
CCTTTCTTCGAACCCTTTGA+GGG + tig0027769:7705-7724 None:intergenic 45.0%
CCTCAAAGGGTTCGAAGAAA+GGG - tig0027769:7703-7722 Msa1435770:intron 45.0%
CTCAAAGGGTTCGAAGAAAG+GGG - tig0027769:7704-7723 Msa1435770:intron 45.0%
TCAAAGGGTTCGAAGAAAGG+GGG - tig0027769:7705-7724 Msa1435770:intron 45.0%
GTCATCAAAGGGTTCGAAGA+AGG - tig0027769:7842-7861 Msa1435770:intron 45.0%
ACAGAAACACTATCCTCCTC+CGG + tig0027769:7894-7913 None:intergenic 45.0%
GTATCTGAGTCTGCTAAAGG+TGG - tig0027769:7912-7931 Msa1435770:intron 45.0%
!! GAGAAGCCTAGTGTTGACAA+TGG - tig0027769:8077-8096 Msa1435770:intron 45.0%
AGTAAGAGTGAAGAGGTCGT+TGG - tig0027769:8107-8126 Msa1435770:intron 45.0%
ACTTTATCATCCTGCTGAGG+AGG + tig0027769:8257-8276 None:intergenic 45.0%
GCAGGATGATAAAGTTCAGC+CGG - tig0027769:8262-8281 Msa1435770:CDS 45.0%
AGAAAAGGAGAAGAAGGCAG+CGG - tig0027769:8388-8407 Msa1435770:intron 45.0%
AGCTGTAGAAGAGAAAGCTG+AGG - tig0027769:8442-8461 Msa1435770:intron 45.0%
TGCATCTCCCTAACATGCTT+TGG + tig0027769:8521-8540 None:intergenic 45.0%
TAGGGAGATGCAAGAACTAC+TGG - tig0027769:8529-8548 Msa1435770:intron 45.0%
AGGAAGAGGAAGAGAAGCAA+AGG - tig0027769:8585-8604 Msa1435770:intron 45.0%
GATAGAGGAACTTGAGAGAC+AGG - tig0027769:8631-8650 Msa1435770:intron 45.0%
CTCCTGAAAAAGAAGCAGGA+AGG - tig0027769:8698-8717 Msa1435770:CDS 45.0%
GTAAGCAGAAAGAAGAAGCC+CGG - tig0027769:8735-8754 Msa1435770:CDS 45.0%
AGGCAGATTCTCAATAGCAC+AGG - tig0027769:8776-8795 Msa1435770:intron 45.0%
GGCAGATTCTCAATAGCACA+GGG - tig0027769:8777-8796 Msa1435770:intron 45.0%
GCAGATTCTCAATAGCACAG+GGG - tig0027769:8778-8797 Msa1435770:intron 45.0%
CAGATTCTCAATAGCACAGG+GGG - tig0027769:8779-8798 Msa1435770:intron 45.0%
TTCATCTGTCTTGACAGCAG+CGG + tig0027769:8900-8919 None:intergenic 45.0%
TTGCAGCCGGTGACATTATT+AGG + tig0027769:9478-9497 None:intergenic 45.0%
GCTGCAGTCAAAGGAAGAAA+GGG + tig0027769:9526-9545 None:intergenic 45.0%
TGCTGCAGTCAAAGGAAGAA+AGG + tig0027769:9527-9546 None:intergenic 45.0%
CTTCCTTTGACTGCAGCAAT+TGG - tig0027769:9529-9548 Msa1435770:CDS 45.0%
! GCAGCAATTGGTTTCAAACC+TGG - tig0027769:9541-9560 Msa1435770:CDS 45.0%
CAGGGAGATCTAATACTTGG+TGG + tig0027769:9681-9700 None:intergenic 45.0%
GTTGGATGGGGCATGATATT+TGG - tig0027769:9786-9805 Msa1435770:intron 45.0%
TCTTCAGTTTCTTCAGCTGC+AGG + tig0027769:9931-9950 None:intergenic 45.0%
!! TCGCCAATTTGCTGCATCAT+GGG - tig0027769:10048-10067 Msa1435770:intron 45.0%
TGACCCATGATGCAGCAAAT+TGG + tig0027769:10054-10073 None:intergenic 45.0%
TCGAATGCAATCCAGAAGCT+TGG + tig0027769:10094-10113 None:intergenic 45.0%
AAGCTTCTGGATTGCATTCG+AGG - tig0027769:10093-10112 Msa1435770:intron 45.0%
! CGAGGTACCAATGTTCAAGA+AGG - tig0027769:10111-10130 Msa1435770:intron 45.0%
AGCCTCACCTTCTTGAACAT+TGG + tig0027769:10121-10140 None:intergenic 45.0%
AATGTTCAAGAAGGTGAGGC+TGG - tig0027769:10120-10139 Msa1435770:intron 45.0%
ATGTTCAAGAAGGTGAGGCT+GGG - tig0027769:10121-10140 Msa1435770:intron 45.0%
GTACGTTGCACCAATCTGTT+GGG + tig0027769:10154-10173 None:intergenic 45.0%
AGTACGTTGCACCAATCTGT+TGG + tig0027769:10155-10174 None:intergenic 45.0%
CTTTCACGTATGTTCTCAGC+AGG + tig0027769:10180-10199 None:intergenic 45.0%
TGCATCAGCTTTCAGTTCCT+TGG + tig0027769:10205-10224 None:intergenic 45.0%
GATGCAACACTGAAAGTTCC+CGG - tig0027769:10219-10238 Msa1435770:intron 45.0%
! CTACTGGTTATTGATACCCC+AGG - tig0027769:10243-10262 Msa1435770:intron 45.0%
ATTGAATGACTCGTGTCCTG+GGG + tig0027769:10262-10281 None:intergenic 45.0%
TTGGTCGTGGACATTATGCA+TGG - tig0027769:10324-10343 Msa1435770:intron 45.0%
! TTGCAGGTTGACAGGCTTTA+TGG - tig0027769:10502-10521 Msa1435770:intron 45.0%
AGCAATGACACAGCAGTCTA+AGG - tig0027769:10558-10577 Msa1435770:intron 45.0%
GTTCAATATGAGGGTCACTC+AGG - tig0027769:10594-10613 Msa1435770:intron 45.0%
GTCACTCAGTTCAAGGAACA+AGG - tig0027769:10710-10729 Msa1435770:intron 45.0%
TTGGTAGGGGTAAAATGGAG+GGG + tig0027769:10879-10898 None:intergenic 45.0%
! GTTGGTAGGGGTAAAATGGA+GGG + tig0027769:10880-10899 None:intergenic 45.0%
TGGATTTGAGTCTTGGATGC+AGG + tig0027769:10939-10958 None:intergenic 45.0%
TTTCAGTGGTGAAGGAATCC+CGG - tig0027769:11461-11480 Msa1435770:intron 45.0%
! CTTCTCGGTCATGGTCTTTT+GGG + tig0027769:11514-11533 None:intergenic 45.0%
GTATGTAAGCTTCTCGGTCA+TGG + tig0027769:11523-11542 None:intergenic 45.0%
! TACATACAGCGAAGAAGTGC+AGG - tig0027769:11536-11555 Msa1435770:intron 45.0%
GCCATCACTTGATGTTGAAG+TGG - tig0027769:11562-11581 Msa1435770:CDS 45.0%
TGACTTCCAAAACGGTACAC+TGG + tig0027769:11653-11672 None:intergenic 45.0%
!!! GTGTACCGTTTTGGAAGTCA+AGG - tig0027769:11653-11672 Msa1435770:intron 45.0%
GTCAAGGTTATTGAAGGCCA+TGG - tig0027769:11669-11688 Msa1435770:intron 45.0%
CGAAGTTCCTTCATTGGATG+AGG + tig0027769:11878-11897 None:intergenic 45.0%
!! AGCTGGTTTGGGTAGGAAAA+AGG - tig0027769:11940-11959 Msa1435770:CDS 45.0%
!! GCTGGTTTGGGTAGGAAAAA+GGG - tig0027769:11941-11960 Msa1435770:CDS 45.0%
TGGATAAGTTTAGGCTGCTG+CGG - tig0027769:13173-13192 Msa1435770:CDS 45.0%
CCGGTTGATTATGCGAAGAA+AGG - tig0027769:13474-13493 Msa1435770:CDS 45.0%
AGGGCAGAAAGTAGCCATTA+AGG - tig0027769:13494-13513 Msa1435770:CDS 45.0%
AACAGCAGAAAATGTTCGGG+AGG - tig0027769:13873-13892 Msa1435770:CDS 45.0%
! TGTACGCTGTTGACCACTTT+TGG - tig0027769:14236-14255 Msa1435770:CDS 45.0%
!!! CGGTGAACAGTACCCTTTTT+TGG + tig0027769:14496-14515 None:intergenic 45.0%
! GGGTACTGTTCACCGTATAA+AGG - tig0027769:14501-14520 Msa1435770:CDS 45.0%
CTGTTCACCGTATAAAGGTG+TGG - tig0027769:14506-14525 Msa1435770:CDS 45.0%
GGTATAATGCCGGACTTTGA+GGG - tig0027769:14771-14790 Msa1435770:CDS 45.0%
! GAGGGATTTTTGTGAGGATG+CGG - tig0027769:14789-14808 Msa1435770:CDS 45.0%
! GATTTTTGTGAGGATGCGGT+TGG - tig0027769:14793-14812 Msa1435770:CDS 45.0%
! GTCCTTGACAGTTACCCTTT+TGG + tig0027769:14919-14938 None:intergenic 45.0%
!! GATTTTCCACCGCCTTGTTG+CGG + tig0027769:7120-7139 None:intergenic 50.0%
! GGTGGAAGTGTGTTTGCTTC+TGG - tig0027769:7396-7415 Msa1435770:three_prime_UTR 50.0%
!! GCTTCTGGATTTGGTGTGCT+TGG - tig0027769:7411-7430 Msa1435770:three_prime_UTR 50.0%
GAAATCGGAGGTAACTGGTG+AGG - tig0027769:7467-7486 Msa1435770:CDS 50.0%
CGATGACGATGAGGATGAAC+CGG - tig0027769:7491-7510 Msa1435770:CDS 50.0%
TCCTCGAAGGGTTCGAAGAA+AGG - tig0027769:7540-7559 Msa1435770:intron 50.0%
ACCTTTCTTCGAACCCTTCG+AGG + tig0027769:7544-7563 None:intergenic 50.0%
TCGAAGGGTTCGAAGAAAGG+TGG - tig0027769:7543-7562 Msa1435770:intron 50.0%
AAGGGTTCGAAGAAAGGTGG+TGG - tig0027769:7546-7565 Msa1435770:intron 50.0%
!! TTTACGGCTGCAGCTGGTTT+TGG - tig0027769:7582-7601 Msa1435770:intron 50.0%
!!! GCAGCTGGTTTTGGTTTGCT+TGG - tig0027769:7591-7610 Msa1435770:intron 50.0%
TTGCTTGGGGATGAGGAAGA+TGG - tig0027769:7606-7625 Msa1435770:intron 50.0%
GGGAAGAAGAAGCCCTCAAA+GGG - tig0027769:7690-7709 Msa1435770:intron 50.0%
CCCTCAAAGGGTTCGAAGAA+AGG - tig0027769:7702-7721 Msa1435770:intron 50.0%
CCCTTTCTTCGAACCCTTTG+AGG + tig0027769:7706-7725 None:intergenic 50.0%
TCAAAGGGTTCGAAGAAGGC+AGG - tig0027769:7846-7865 Msa1435770:intron 50.0%
GAGTAAAGCTATTCCGGAGG+AGG - tig0027769:7878-7897 Msa1435770:intron 50.0%
GAGTGGGAGGACTAAAGAAG+AGG - tig0027769:8163-8182 Msa1435770:intron 50.0%
TGGGAGGACTAAAGAAGAGG+AGG - tig0027769:8166-8185 Msa1435770:intron 50.0%
GATAAGCTTCTCGCAGAGCT+TGG - tig0027769:8197-8216 Msa1435770:intron 50.0%
GCAGAACCTACTACAGGAAC+CGG + tig0027769:8284-8303 None:intergenic 50.0%
!! CTTTTCTCCTGAAGCACCAG+GGG + tig0027769:8306-8325 None:intergenic 50.0%
!! CCTTTTCTCCTGAAGCACCA+GGG + tig0027769:8307-8326 None:intergenic 50.0%
!! TCCTTTTCTCCTGAAGCACC+AGG + tig0027769:8308-8327 None:intergenic 50.0%
TGGTGCTTCAGGAGAAAAGG+AGG - tig0027769:8307-8326 Msa1435770:intron 50.0%
GGTGCTTCAGGAGAAAAGGA+GGG - tig0027769:8308-8327 Msa1435770:intron 50.0%
CACTTTCTTGTCAGCCGCTT+TGG + tig0027769:8498-8517 None:intergenic 50.0%
AAGAAGAAGAGGAGCGACGA+AGG - tig0027769:8609-8628 Msa1435770:intron 50.0%
ACTTGAGAGACAGGCAGAAG+AGG - tig0027769:8640-8659 Msa1435770:CDS 50.0%
GGTTGAAGAAGTGGAGATGG+AGG - tig0027769:8973-8992 Msa1435770:intron 50.0%
ATCCAACTAGAGAAGGGGGT+TGG + tig0027769:9773-9792 None:intergenic 50.0%
AACCCCCTTCTCTAGTTGGA+TGG - tig0027769:9772-9791 Msa1435770:intron 50.0%
ACCCCCTTCTCTAGTTGGAT+GGG - tig0027769:9773-9792 Msa1435770:intron 50.0%
TGCCCCATCCAACTAGAGAA+GGG + tig0027769:9779-9798 None:intergenic 50.0%
ATGCCCCATCCAACTAGAGA+AGG + tig0027769:9780-9799 None:intergenic 50.0%
ACAGGCCAAAGTTGTGGTTG+AGG - tig0027769:9957-9976 Msa1435770:intron 50.0%
TTCACTCGGCTTAGAAGGCA+CGG + tig0027769:10016-10035 None:intergenic 50.0%
TGCCTTCTAAGCCGAGTGAA+GGG - tig0027769:10016-10035 Msa1435770:intron 50.0%
TTCCCTTCACTCGGCTTAGA+AGG + tig0027769:10021-10040 None:intergenic 50.0%
!! GTCGCCAATTTGCTGCATCA+TGG - tig0027769:10047-10066 Msa1435770:intron 50.0%
TTGCTGCATCATGGGTCATG+TGG - tig0027769:10056-10075 Msa1435770:intron 50.0%
ATCATGGGTCATGTGGACAC+TGG - tig0027769:10063-10082 Msa1435770:intron 50.0%
CACTGGCAAAACCAAGCTTC+TGG - tig0027769:10080-10099 Msa1435770:intron 50.0%
TGTTCAAGAAGGTGAGGCTG+GGG - tig0027769:10122-10141 Msa1435770:intron 50.0%
ACTGAAAGTTCCCGGTCTAC+TGG - tig0027769:10227-10246 Msa1435770:intron 50.0%
CACTGTTCTCGCAACATTGC+AGG - tig0027769:10486-10505 Msa1435770:intron 50.0%
! TCGCAACATTGCAGGTTGAC+AGG - tig0027769:10494-10513 Msa1435770:intron 50.0%
! AGGTTGACAGGCTTTATGGC+TGG - tig0027769:10506-10525 Msa1435770:intron 50.0%
!! GGTTGGTAGGGGTAAAATGG+AGG + tig0027769:10881-10900 None:intergenic 50.0%
!! GGTGGTTGGTAGGGGTAAAA+TGG + tig0027769:10884-10903 None:intergenic 50.0%
AAAACAACCCCAAGCCGTTG+AGG - tig0027769:10977-10996 Msa1435770:intron 50.0%
TGTAATCGCCTCAACGGCTT+GGG + tig0027769:10988-11007 None:intergenic 50.0%
ATGTAATCGCCTCAACGGCT+TGG + tig0027769:10989-11008 None:intergenic 50.0%
! GCTTCTCGGTCATGGTCTTT+TGG + tig0027769:11515-11534 None:intergenic 50.0%
! TGGCTACCAGTGTACCGTTT+TGG - tig0027769:11644-11663 Msa1435770:intron 50.0%
AAAGGCCCCTCAGACTAAAG+AGG + tig0027769:12168-12187 None:intergenic 50.0%
GGGCTTGAACATGCTATTGC+TGG - tig0027769:12430-12449 Msa1435770:intron 50.0%
!! AAAGGCAGCTTTGGAAGACG+TGG - tig0027769:12501-12520 Msa1435770:intron 50.0%
!! AGCTTTGGAAGACGTGGAGT+CGG - tig0027769:12507-12526 Msa1435770:intron 50.0%
TTGAGCAGGATTGACAGGAG+TGG - tig0027769:12532-12551 Msa1435770:intron 50.0%
AGGATTGACAGGAGTGGTGA+GGG - tig0027769:12538-12557 Msa1435770:intron 50.0%
CATAGGCCCTGTACACAAGA+AGG - tig0027769:12654-12673 Msa1435770:intron 50.0%
TCAAAGTCACCCCTGAAGCT+AGG - tig0027769:12743-12762 Msa1435770:intron 50.0%
CAAAGTCACCCCTGAAGCTA+GGG - tig0027769:12744-12763 Msa1435770:intron 50.0%
TGCAAGATCCCTAGCTTCAG+GGG + tig0027769:12755-12774 None:intergenic 50.0%
CTGCAAGATCCCTAGCTTCA+GGG + tig0027769:12756-12775 None:intergenic 50.0%
TCTGCAAGATCCCTAGCTTC+AGG + tig0027769:12757-12776 None:intergenic 50.0%
AGGCTGCTGCGGTTAAAATG+AGG - tig0027769:13184-13203 Msa1435770:CDS 50.0%
GACTATGGAGGAATGGAAGC+TGG - tig0027769:14645-14664 Msa1435770:CDS 50.0%
TATGGAGGAATGGAAGCTGG+TGG - tig0027769:14648-14667 Msa1435770:CDS 50.0%
CGGTATAATGCCGGACTTTG+AGG - tig0027769:14770-14789 Msa1435770:CDS 50.0%
ACTTCTATGCTCCTGCAGCT+TGG - tig0027769:14884-14903 Msa1435770:CDS 50.0%
CTTGGATCCTCTGGCCAAAA+GGG - tig0027769:14902-14921 Msa1435770:CDS 50.0%
! ACAGTTACCCTTTTGGCCAG+AGG + tig0027769:14912-14931 None:intergenic 50.0%
GGCCAAAAGGGTAACTGTCA+AGG - tig0027769:14914-14933 Msa1435770:CDS 50.0%
AGGGTAACTGTCAAGGACGA+AGG - tig0027769:14921-14940 Msa1435770:CDS 50.0%
!!! TTGGTTTTGGGAACGGGCAT+AGG - tig0027769:15129-15148 Msa1435770:five_prime_UTR 50.0%
TGCTTTGTGCGGCGGTGAAA+AGG + tig0027769:6927-6946 None:intergenic 55.0%
GGTTTCTCTTCCACCGCAAC+CGG + tig0027769:7216-7235 None:intergenic 55.0%
GTTGCGGTGGAAGAGAAACC+CGG - tig0027769:7216-7235 Msa1435770:three_prime_UTR 55.0%
TTGCGGTGGAAGAGAAACCC+GGG - tig0027769:7217-7236 Msa1435770:three_prime_UTR 55.0%
!! AGTGGTGGTGGTAGTAGTGG+TGG - tig0027769:7378-7397 Msa1435770:three_prime_UTR 55.0%
! GGTTCGAAGAAAGGTGGTGG+TGG - tig0027769:7549-7568 Msa1435770:intron 55.0%
!! TCGAAGAAAGGTGGTGGTGG+TGG - tig0027769:7552-7571 Msa1435770:intron 55.0%
AGTGTGTTTACGGCTGCAGC+TGG - tig0027769:7576-7595 Msa1435770:intron 55.0%
TGGTGAGGAGAAATCGGACG+AGG - tig0027769:7647-7666 Msa1435770:intron 55.0%
GGGGAAGAAGAAGCCCTCAA+AGG - tig0027769:7689-7708 Msa1435770:intron 55.0%
AAGGGTTCGAAGAAGGCAGG+TGG - tig0027769:7849-7868 Msa1435770:intron 55.0%
AGCAGGTTGTGCTGTAGCAG+GGG + tig0027769:8228-8247 None:intergenic 55.0%
CAGCAGGTTGTGCTGTAGCA+GGG + tig0027769:8229-8248 None:intergenic 55.0%
TGCTACAGCACAACCTGCTG+CGG - tig0027769:8229-8248 Msa1435770:intron 55.0%
! GTTCAGCCGGTTCCTGTAGT+AGG - tig0027769:8275-8294 Msa1435770:CDS 55.0%
CCCTGGTGCTTCAGGAGAAA+AGG - tig0027769:8304-8323 Msa1435770:intron 55.0%
AGAGGAGCGACGAAGGATAG+AGG - tig0027769:8616-8635 Msa1435770:intron 55.0%
GAAAGAAGAAGCCCGGCGTT+TGG - tig0027769:8742-8761 Msa1435770:intron 55.0%
TCCTCATTGCCTCCAAACGC+CGG + tig0027769:8757-8776 None:intergenic 55.0%
CTCCCTGTATCTTGTAGGCG+TGG - tig0027769:9694-9713 Msa1435770:CDS 55.0%
GGCCACGCCTACAAGATACA+GGG + tig0027769:9699-9718 None:intergenic 55.0%
TGGCCACGCCTACAAGATAC+AGG + tig0027769:9700-9719 None:intergenic 55.0%
AGCCAACCCCCTTCTCTAGT+TGG - tig0027769:9768-9787 Msa1435770:intron 55.0%
CCCCATCCAACTAGAGAAGG+GGG + tig0027769:9777-9796 None:intergenic 55.0%
CCCCCTTCTCTAGTTGGATG+GGG - tig0027769:9774-9793 Msa1435770:intron 55.0%
GCCCCATCCAACTAGAGAAG+GGG + tig0027769:9778-9797 None:intergenic 55.0%
TCAGCTGCAGGCTTCGTAAC+AGG + tig0027769:9919-9938 None:intergenic 55.0%
GTGCCTTCTAAGCCGAGTGA+AGG - tig0027769:10015-10034 Msa1435770:intron 55.0%
AGCCGAGTGAAGGGAACCTT+CGG - tig0027769:10025-10044 Msa1435770:intron 55.0%
GACCGAAGGTTCCCTTCACT+CGG + tig0027769:10030-10049 None:intergenic 55.0%
TGCAGCAAATTGGCGACCGA+AGG + tig0027769:10044-10063 None:intergenic 55.0%
GTTCAAGAAGGTGAGGCTGG+GGG - tig0027769:10123-10142 Msa1435770:intron 55.0%
!! GGGGGTATCACCCAACAGAT+TGG - tig0027769:10141-10160 Msa1435770:intron 55.0%
AACTTGAGGTCTCGGGGTTC+AGG - tig0027769:10282-10301 Msa1435770:CDS 55.0%
GTAATCGCCTCAACGGCTTG+GGG + tig0027769:10987-11006 None:intergenic 55.0%
GTCTGAGGGGCCTTTAACAG+AGG - tig0027769:12173-12192 Msa1435770:CDS 55.0%
GGGAATCAAGATCACTGCCC+AGG - tig0027769:12291-12310 Msa1435770:intron 55.0%
CGGTCTTGAGCAGGATTGAC+AGG - tig0027769:12527-12546 Msa1435770:intron 55.0%
CAGGATTGACAGGAGTGGTG+AGG - tig0027769:12537-12556 Msa1435770:intron 55.0%
TGTGTCCAGGCATCTACCCT+TGG - tig0027769:12565-12584 Msa1435770:intron 55.0%
ATGAGCCAAGGGTAGATGCC+TGG + tig0027769:12573-12592 None:intergenic 55.0%
GGCATCTACCCTTGGCTCAT+TGG - tig0027769:12573-12592 Msa1435770:intron 55.0%
GCTTGGATCCTCTGGCCAAA+AGG - tig0027769:14901-14920 Msa1435770:CDS 55.0%
CGTCTGTGTAGTGTGAGAGC+TGG - tig0027769:15229-15248 Msa1435770:five_prime_UTR 55.0%
! TTCTCGTCGTCGCGGATTGC+TGG + tig0027769:7090-7109 None:intergenic 60.0%
GAGAATCCTCCGCCGCAACA+AGG - tig0027769:7105-7124 Msa1435770:three_prime_UTR 60.0%
AATCCTCCGCCGCAACAAGG+CGG - tig0027769:7108-7127 Msa1435770:three_prime_UTR 60.0%
! TTTCCACCGCCTTGTTGCGG+CGG + tig0027769:7117-7136 None:intergenic 60.0%
!! GGAGGAGGTGTCAGAGGATG+CGG - tig0027769:7188-7207 Msa1435770:three_prime_UTR 60.0%
TGGTGAGGGCGATGACGATG+AGG - tig0027769:7482-7501 Msa1435770:CDS 60.0%
GCAGCAGGTTGTGCTGTAGC+AGG + tig0027769:8230-8249 None:intergenic 60.0%
CCAGGGGCAGAACCTACTAC+AGG + tig0027769:8290-8309 None:intergenic 60.0%
CCTGTAGTAGGTTCTGCCCC+TGG - tig0027769:8287-8306 Msa1435770:intron 60.0%
! AGCAGCAGCTGGAAGTGCAC+CGG - tig0027769:8412-8431 Msa1435770:intron 60.0%
AGAAGAAGCCCGGCGTTTGG+AGG - tig0027769:8745-8764 Msa1435770:intron 60.0%
CCTCATTGCCTCCAAACGCC+GGG + tig0027769:8756-8775 None:intergenic 60.0%
GGCGTTTGGAGGCAATGAGG+AGG - tig0027769:8756-8775 Msa1435770:intron 60.0%
! ACAGGGGGCATGACTCTTCC+TGG - tig0027769:8794-8813 Msa1435770:intron 60.0%
! GAAGGCACGGCAGACAGTTG+TGG + tig0027769:10003-10022 None:intergenic 60.0%
ACGTGGAGTCGGTCTTGAGC+AGG - tig0027769:12518-12537 Msa1435770:intron 60.0%
!! TGGTGAGGGCGTTTGTGTCC+AGG - tig0027769:12552-12571 Msa1435770:intron 60.0%
CTCCTGCAGCTTGGATCCTC+TGG - tig0027769:14893-14912 Msa1435770:CDS 60.0%
GCGGAGGATTCTCGTCGTCG+CGG + tig0027769:7098-7117 None:intergenic 65.0%
!! CGGAGTGGAGGAGGTGTCAG+AGG - tig0027769:7182-7201 Msa1435770:three_prime_UTR 65.0%
GGTGTCAGAGGATGCGGCTC+CGG - tig0027769:7194-7213 Msa1435770:three_prime_UTR 65.0%
AGAGGATGCGGCTCCGGTTG+CGG - tig0027769:7200-7219 Msa1435770:three_prime_UTR 65.0%
GGTTCTGCCCCTGGTGCTTC+AGG - tig0027769:8296-8315 Msa1435770:intron 65.0%
CCCGGCGTTTGGAGGCAATG+AGG - tig0027769:8753-8772 Msa1435770:intron 65.0%
GGGCATGACTCTTCCTGGCG+CGG - tig0027769:8799-8818 Msa1435770:intron 65.0%
ACTCTTCCTGGCGCGGACAC+TGG - tig0027769:8806-8825 Msa1435770:intron 65.0%
GGCCAGAGGATCCAAGCTGC+AGG + tig0027769:14898-14917 None:intergenic 65.0%
TGCTGAGGAGGAGCCGCAGC+AGG + tig0027769:8245-8264 None:intergenic 70.0%
TGCTGCGGCTCCTCCTCAGC+AGG - tig0027769:8244-8263 Msa1435770:CDS 70.0%
AAGGCAGCGGCAGCAGCAGC+TGG - tig0027769:8401-8420 Msa1435770:intron 70.0%
CTTCCTGGCGCGGACACTGG+TGG - tig0027769:8809-8828 Msa1435770:intron 70.0%
!! GAGAAGGGGGTTGGCTCCGC+AGG + tig0027769:9764-9783 None:intergenic 70.0%
! CCACCGCCTTGTTGCGGCGG+AGG + tig0027769:7114-7133 None:intergenic 75.0%
CCTCCGCCGCAACAAGGCGG+TGG - tig0027769:7111-7130 Msa1435770:three_prime_UTR 75.0%
GGATGCGGCTCCGGTTGCGG+TGG - tig0027769:7203-7222 Msa1435770:three_prime_UTR 75.0%
GGTCCACCAGTGTCCGCGCC+AGG + tig0027769:8815-8834 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0027769 gene 6810 15342 6810 ID=Msa1435770;Name=Msa1435770
tig0027769 mRNA 6810 15342 6810 ID=Msa1435770-mRNA-1;Parent=Msa1435770;Name=Msa1435770-mRNA-1;_AED=0.06;_eAED=0.06;_QI=262|0.81|0.83|1|1|1|12|640|1325
tig0027769 exon 6810 7515 6810 ID=Msa1435770-mRNA-1:exon:9884;Parent=Msa1435770-mRNA-1
tig0027769 exon 8233 8301 8233 ID=Msa1435770-mRNA-1:exon:9883;Parent=Msa1435770-mRNA-1
tig0027769 exon 8637 8756 8637 ID=Msa1435770-mRNA-1:exon:9882;Parent=Msa1435770-mRNA-1
tig0027769 exon 9165 9722 9165 ID=Msa1435770-mRNA-1:exon:9881;Parent=Msa1435770-mRNA-1
tig0027769 exon 9840 9899 9840 ID=Msa1435770-mRNA-1:exon:9880;Parent=Msa1435770-mRNA-1
tig0027769 exon 10248 10313 10248 ID=Msa1435770-mRNA-1:exon:9879;Parent=Msa1435770-mRNA-1
tig0027769 exon 10403 10498 10403 ID=Msa1435770-mRNA-1:exon:9878;Parent=Msa1435770-mRNA-1
tig0027769 exon 10595 10685 10595 ID=Msa1435770-mRNA-1:exon:9877;Parent=Msa1435770-mRNA-1
tig0027769 exon 11345 11445 11345 ID=Msa1435770-mRNA-1:exon:9876;Parent=Msa1435770-mRNA-1
tig0027769 exon 11537 11644 11537 ID=Msa1435770-mRNA-1:exon:9875;Parent=Msa1435770-mRNA-1
tig0027769 exon 11730 12253 11730 ID=Msa1435770-mRNA-1:exon:9874;Parent=Msa1435770-mRNA-1
tig0027769 exon 12962 15342 12962 ID=Msa1435770-mRNA-1:exon:9873;Parent=Msa1435770-mRNA-1
tig0027769 five_prime_UTR 15081 15342 15081 ID=Msa1435770-mRNA-1:five_prime_utr;Parent=Msa1435770-mRNA-1
tig0027769 CDS 12962 15080 12962 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 11730 12253 11730 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 11537 11644 11537 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 11345 11445 11345 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 10595 10685 10595 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 10403 10498 10403 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 10248 10313 10248 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 9840 9899 9840 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 9165 9722 9165 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 8637 8756 8637 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 8233 8301 8233 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 CDS 7450 7515 7450 ID=Msa1435770-mRNA-1:cds;Parent=Msa1435770-mRNA-1
tig0027769 three_prime_UTR 6810 7449 6810 ID=Msa1435770-mRNA-1:three_prime_utr;Parent=Msa1435770-mRNA-1
Gene Sequence

>Msa1435770

ATGGGGAAGAAGAAGCCAGCAATCCGCGACGACGAGAATCCTCCGCCGCAACAAGGCGGTGGAAAATCAAAGAAGAAGGCTCCGGTTATCGATGACGATGAATATTCTATCGGAGTGGAGGAGGTGTCAGAGGATGCGGCTCCGGTTGCGGTGGAAGAGAAACCCGGGAAAAAGAAAGGTAAGAAAGGTAATGCTAAATCCAAAAAAGATAATGATGATGATGATTTTGATGATGCTGTTGTTGTTGATGATGATGATGTGAATGAAATTGTTTTTGCTGGGAAGAAAAAAGGGAAATCGAAAAAAAGTGGTGGTGGTAGTAGTGGTGGAAGTGTGTTTGCTTCTGGATTTGGTGTGCTTGGTGATGAGGACGATGTTGATAATGATGATGAAGAGAAATCGGAGGTAACTGGTGAGGGCGATGACGATGAGGATGAACCGGTTGTTAGCTTTACAGGGAAGAAGAAATCCTCGAAGGGTTCGAAGAAAGGTGGTGGTGGTGGAAGTGTGTTTACGGCTGCAGCTGGTTTTGGTTTGCTTGGGGATGAGGAAGATGGTGATAATGATAATGATAATGGTGAGGAGAAATCGGACGAGGATGAACCTGTTGTTTTTTCGGGGAAGAAGAAGCCCTCAAAGGGTTCGAAGAAAGGGGGAAGTAGTTTGTTCAGTGCATTAGATGAGAATGATGATGGAGAAGAGGAGAGTAAGAATGAAAAGGTAGAAGACGATGATGATGAACCAATCACTTTCTCGGGTAAGAAAAAGAAGTCATCAAAGGGTTCGAAGAAGGCAGGTGGTTCATTGAGTAAAGCTATTCCGGAGGAGGATAGTGTTTCTGTATCTGAGTCTGCTAAAGGTGGTGATGATGAGAAAGATGAGGATGATGTTTCTTTTGCATTTACTGGTAAAAAGAAGTCTTCTAAAAAGAAAAGTGGTAGTGCTTCTGCCAAAGTGAGTGATGAAATCGAGTTTGGGAGTGAAAGTGTAAATGTTGTGGAGGCTGAGAAGCCTAGTGTTGACAATGGTAATATAAGTAAGAGTGAAGAGGTCGTTGGAACTTCCAAGAATAAGAAAAAGAATAAGAAGAAGAGTGGGAGGACTAAAGAAGAGGAGGATGATTTAGATAAGCTTCTCGCAGAGCTTGGCGAAGCCCCTGCTACAGCACAACCTGCTGCGGCTCCTCCTCAGCAGGATGATAAAGTTCAGCCGGTTCCTGTAGTAGGTTCTGCCCCTGGTGCTTCAGGAGAAAAGGAGGGAGAAGATGAGACTGTAGAGTCAGCTGCCGCAAAAAAGAAGAAAAAGAAGAAGGAAAAAGAAAAGGAGAAGAAGGCAGCGGCAGCAGCAGCTGGAAGTGCACCGGTAATTGAAGCTGTAGAAGAGAAAGCTGAGGCAATTGAACCGAAGAAAAATGATTCGAAGACCAAAGCGGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAACTACTGGCTAGAAGAAAAGAGGCTGAAGAAAAAAAGAAAAAGGAAGAGGAAGAGAAGCAAAGGAAAGAAGAAGAGGAGCGACGAAGGATAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAGAAACTCCTGAAAAAGAAGCAGGAAGGTAAATTGTTAACTGGTAAGCAGAAAGAAGAAGCCCGGCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGGGGCATGACTCTTCCTGGCGCGGACACTGGTGGACCATCCAAAAAACCTATTTATCAGACAAAGAAAGGGAAAACAACGAATCGAAATCATAATGGTGCCGCTGCTGTCAAGACAGATGAAAGTGTTGAAGCAACGGAAACTACTGCTGATTTAGATTCAGAGGAACCTGAAAAGGTTGAAGAAGTGGAGATGGAGGACAAAGTTGAACTTCCTGAAGTTGTTGAAGAAGTAGTGGATGAAGATGATGATGTTGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTCAATCTGAATGATAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACCAATTGTCAAAAAAGAGATTAAAAATGGCATACCTTCTAAAAATGCTGCAGGTGCTACAAATAAACCTGTTACGAAGCCTGCAGCTGAAGAAACTGAAGATAGAAAACAGGCCAAAGTTGTGGTTGAGGATAAAAAGAAAAGGCACGATCCACAACTGTCTGCCGTGCCTTCTAAGCCGAGTGAAGGGAACCTTCGGTCGCCAATTTGCTGCATCATGGGTCATGTGGACACTGGCAAAACCAAGCTTCTGGATTGCATTCGAGGTACCAATGTTCAAGAAGGTGAGGCTGGGGGTATCACCCAACAGATTGGTGCAACGTACTTTCCTGCTGAGAACATACGTGAAAGAACCAAGGAACTGAAAGCTGATGCAACACTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACGAGTCATTCAATAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTCGTGGACATTATGCATGGCTTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACTGAATTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGACACAGCAGTCTAAGGATGTTCAGAATGAGTTCAATATGAGGGTCACTCAGATTGTCACTCAGTTCAAGGAACAAGGGCTAAATACAGAATTGTATTACAAAAACAAAGAAATGGGCGAGACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCGGATATGTTATTACTATTAGTTCAGTGGACCCAAAAGACCATGACCGAGAAGCTTACATACAGCGAAGAAGTGCAGTGTACCGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGGGATCAAATAGTTGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCTATGGGAATCAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAGCTAGTTTATATGTGGTAAAGCCTGATGATGATTTGGAATATATTAAAAAGGCAGCTTTGGAAGACGTGGAGTCGGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGCGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGAAGCATTATTGGAGTTTCTGAAAACTCCAGAAGTGAATATTCCTGTTAGTGCTATAAACATAGGCCCTGTACACAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGATCTTGCAGAAGAATTGGGTGTGAAAATTTTTATAGCGGATATCATTTATCATCTATTTGATCAATTTAAGGCTTACATGGACAACATTAAGGAGGAGAAAAAGAAAGAATCTGCGGATGAGGCAGTCTTCCCATGTGTTCTGAAGATCTTACCAAATTGTGTCTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGATTGGAACTCCAATTTGTATCCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTATGCGAAGAAAGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAACAGCAGAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGATGATCTGACTATGGAGGAATGGAAGCTGGTGGTTAAATTGAAGACTTTGTTCAAGATACAATAA
Protein sequence

>Msa1435770

MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEEVSEDAAPVAVEEKPGKKKGKKGNAKSKKDNDDDDFDDAVVVDDDDVNEIVFAGKKKGKSKKSGGGSSGGSVFASGFGVLGDEDDVDNDDEEKSEVTGEGDDDEDEPVVSFTGKKKSSKGSKKGGGGGSVFTAAAGFGLLGDEEDGDNDNDNGEEKSDEDEPVVFSGKKKPSKGSKKGGSSLFSALDENDDGEEESKNEKVEDDDDEPITFSGKKKKSSKGSKKAGGSLSKAIPEEDSVSVSESAKGGDDEKDEDDVSFAFTGKKKSSKKKSGSASAKVSDEIEFGSESVNVVEAEKPSVDNGNISKSEEVVGTSKNKKKNKKKSGRTKEEEDDLDKLLAELGEAPATAQPAAAPPQQDDKVQPVPVVGSAPGASGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAGSAPVIEAVEEKAEAIEPKKNDSKTKAADKKVPKHVREMQELLARRKEAEEKKKKEEEEKQRKEEEERRRIEELERQAEEAKRRKKEKEKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGMTLPGADTGGPSKKPIYQTKKGKTTNRNHNGAAAVKTDESVEATETTADLDSEEPEKVEEVEMEDKVELPEVVEEVVDEDDDVEDEWDAKSWDDVNLNDRGAFADEEVDSEPEPIVKKEIKNGIPSKNAAGATNKPVTKPAAEETEDRKQAKVVVEDKKKRHDPQLSAVPSKPSEGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMTQQSKDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMTEKLTYSEEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSAINIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICIPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELDDLTMEEWKLVVKLKTLFKIQ*