AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0822180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0822180 MtrunA17_Chr5g0442401 97.087 618 18 0 1 618 1 618 0.0 1243
Msa0822180 MtrunA17_Chr5g0442391 81.790 324 8 3 614 896 259 572 0.0 535
Msa0822180 MtrunA17_Chr3g0095501 67.791 326 53 5 614 896 265 581 1.35e-148 451
Msa0822180 MtrunA17_Chr1g0183051 44.660 309 119 4 608 873 205 504 2.77e-79 266
Msa0822180 MtrunA17_Chr1g0177141 45.565 248 118 4 156 397 237 473 7.45e-62 227
Msa0822180 MtrunA17_Chr1g0177141 42.857 84 48 0 535 618 524 607 3.72e-16 83.6
Msa0822180 MtrunA17_Chr8g0392581 51.923 208 87 3 183 388 269 465 2.99e-61 226
Msa0822180 MtrunA17_Chr8g0392581 35.556 90 58 0 532 621 532 621 2.05e-11 68.2
Msa0822180 MtrunA17_Chr1g0208961 49.765 213 94 3 178 388 320 521 4.05e-60 223
Msa0822180 MtrunA17_Chr1g0208961 34.444 90 59 0 532 621 586 675 4.34e-13 73.6
Msa0822180 MtrunA17_Chr8g0355291 50.704 213 92 2 178 388 240 441 1.32e-56 212
Msa0822180 MtrunA17_Chr8g0355291 29.457 129 91 0 490 618 465 593 1.69e-14 78.2
Msa0822180 MtrunA17_Chr4g0077061 43.363 226 106 5 178 392 596 810 6.02e-50 191
Msa0822180 MtrunA17_Chr5g0432591 35.772 246 139 4 148 389 169 399 1.49e-40 159
Msa0822180 MtrunA17_Chr3g0086391 38.000 200 111 2 184 383 409 595 3.05e-39 157
Msa0822180 MtrunA17_Chr6g0476001 35.909 220 129 2 166 385 233 440 9.54e-38 150
Msa0822180 MtrunA17_Chr1g0211961 39.500 200 108 2 184 383 532 718 1.77e-37 152
Msa0822180 MtrunA17_Chr1g0156271 39.000 200 109 2 184 383 567 753 1.05e-36 150
Msa0822180 MtrunA17_Chr1g0194381 35.849 212 121 3 179 386 49 249 1.59e-35 144
Msa0822180 MtrunA17_Chr3g0100131 33.977 259 149 6 130 379 526 771 1.32e-34 143
Msa0822180 MtrunA17_Chr8g0377111 37.500 200 108 4 185 383 2 185 2.58e-34 140
Msa0822180 MtrunA17_Chr2g0329131 33.977 259 149 6 130 379 505 750 1.27e-33 140
Msa0822180 MtrunA17_Chr2g0283271 36.813 182 102 4 184 364 50 219 1.84e-31 132
Msa0822180 MtrunA17_Chr3g0099251 32.353 238 120 4 179 386 47 273 1.39e-30 129
Msa0822180 MtrunA17_Chr4g0067151 29.084 251 161 7 626 872 84 321 2.82e-27 113
Msa0822180 MtrunA17_Chr1g0195601 38.333 180 96 3 185 364 28 192 1.52e-26 117
Msa0822180 MtrunA17_Chr7g0259941 28.112 249 123 5 178 383 39 274 5.85e-26 114
Msa0822180 MtrunA17_Chr8g0359501 27.711 249 124 5 178 383 39 274 2.09e-25 112
Msa0822180 MtrunA17_Chr4g0010901 30.085 236 122 5 179 383 264 487 3.39e-25 113
Msa0822180 MtrunA17_Chr1g0185501 27.389 314 168 8 606 872 12 312 5.79e-24 103
Msa0822180 MtrunA17_Chr8g0359451 27.313 227 109 5 200 383 27 240 1.55e-23 101
Msa0822180 MtrunA17_Chr3g0123681 33.810 210 124 3 177 384 256 452 3.84e-23 106
Msa0822180 MtrunA17_Chr4g0044491 36.054 147 83 2 237 383 79 214 8.75e-23 104
Msa0822180 MtrunA17_Chr8g0354471 44.545 110 57 2 164 273 90 195 1.58e-21 93.6
Msa0822180 MtrunA17_Chr1g0164621 37.705 183 98 5 204 384 4 172 6.64e-21 99.4
Msa0822180 MtrunA17_Chr3g0082091 37.158 183 99 5 204 384 4 172 2.12e-20 97.4
Msa0822180 MtrunA17_Chr3g0136971 27.059 170 112 2 623 791 464 622 3.41e-14 76.6
Msa0822180 MtrunA17_Chr3g0136971 22.105 285 187 8 628 888 357 630 9.02e-13 72.4
Msa0822180 MtrunA17_Chr0c12g0493631 44.340 106 57 1 516 621 115 218 3.90e-14 76.6
Msa0822180 MtrunA17_Chr5g0401661 27.338 278 174 9 614 872 330 598 1.94e-13 74.3
Msa0822180 MtrunA17_Chr8g0383711 24.016 254 172 8 622 872 62 297 4.07e-13 71.2
Msa0822180 MtrunA17_Chr5g0401671 26.241 282 139 10 614 883 242 466 9.42e-13 72.0
Msa0822180 MtrunA17_Chr8g0352821 23.134 268 184 9 612 875 218 467 1.13e-12 72.0
Msa0822180 MtrunA17_Chr3g0098921 25.352 213 137 8 688 882 154 362 1.54e-12 70.9
Msa0822180 MtrunA17_Chr8g0354481 35.065 77 50 0 307 383 8 84 2.09e-12 67.0
Msa0822180 MtrunA17_Chr6g0448921 26.042 192 134 6 688 877 32 217 3.01e-12 70.5
Msa0822180 MtrunA17_Chr4g0053651 24.399 291 151 7 605 883 216 449 3.26e-12 70.1
Msa0822180 MtrunA17_Chr5g0395821 25.943 212 136 8 688 882 150 357 3.71e-12 69.7
Msa0822180 MtrunA17_Chr3g0116561 25.346 217 146 8 664 872 300 508 1.52e-11 67.8
Msa0822180 MtrunA17_Chr3g0093681 23.166 259 181 6 616 872 268 510 1.81e-11 67.8
Msa0822180 MtrunA17_Chr1g0172501 23.166 259 181 6 616 872 268 510 1.95e-11 67.8
Msa0822180 MtrunA17_Chr1g0176241 23.986 296 161 11 626 876 167 443 7.20e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0822180 AT2G30800.1 58.143 614 233 8 19 618 13 616 0.0 689
Msa0822180 AT1G06670.1 50.378 661 253 10 12 618 1 640 0.0 636
Msa0822180 AT1G06670.2 50.612 654 262 9 12 618 1 640 0.0 636
Msa0822180 AT5G08560.1 54.572 339 97 5 604 894 259 588 1.08e-120 379
Msa0822180 AT5G08560.2 54.572 339 97 5 604 894 259 588 1.08e-120 379
Msa0822180 AT5G08560.3 54.572 339 97 5 604 894 259 588 1.08e-120 379
Msa0822180 AT2G30800.2 61.905 273 99 2 351 618 1 273 7.90e-104 344
Msa0822180 AT5G43920.1 45.659 311 115 5 614 879 219 520 3.20e-80 269
Msa0822180 AT1G48650.2 51.174 213 91 3 178 388 290 491 3.90e-63 232
Msa0822180 AT1G48650.2 37.778 90 56 0 532 621 557 646 5.41e-14 77.0
Msa0822180 AT1G48650.1 51.174 213 91 3 178 388 290 491 4.12e-63 232
Msa0822180 AT1G48650.1 37.778 90 56 0 532 621 557 646 5.09e-14 77.0
Msa0822180 AT2G35920.2 46.610 236 113 3 155 388 138 362 4.79e-62 227
Msa0822180 AT2G35920.2 44.048 84 47 0 535 618 427 510 3.74e-17 87.0
Msa0822180 AT2G35920.1 36.053 380 211 9 36 399 71 434 7.04e-62 227
Msa0822180 AT2G35920.1 44.048 84 47 0 535 618 485 568 3.84e-17 87.0
Msa0822180 AT2G35920.3 36.053 380 211 9 36 399 103 466 7.57e-62 228
Msa0822180 AT2G35920.3 44.048 84 47 0 535 618 517 600 4.26e-17 87.0
Msa0822180 AT5G04895.1 49.519 208 92 2 183 388 256 452 7.86e-60 222
Msa0822180 AT5G04895.1 27.132 129 94 0 490 618 476 604 2.78e-13 74.7
Msa0822180 AT2G01130.2 48.815 211 95 2 184 392 152 351 3.99e-58 216
Msa0822180 AT2G01130.2 40.000 90 54 0 532 621 412 501 8.69e-15 79.7
Msa0822180 AT2G01130.1 48.815 211 95 2 184 392 217 416 7.21e-58 216
Msa0822180 AT2G01130.1 40.230 87 52 0 532 618 477 563 1.01e-14 79.3
Msa0822180 AT1G58060.1 32.009 453 219 11 178 618 605 980 4.83e-55 208
Msa0822180 AT1G58050.1 34.202 307 149 8 171 438 581 873 1.16e-45 179
Msa0822180 AT1G58050.1 43.529 85 48 0 534 618 863 947 1.75e-11 68.9
Msa0822180 AT1G32490.2 36.681 229 128 3 177 405 384 595 3.75e-40 160
Msa0822180 AT1G32490.1 36.681 229 128 3 177 405 394 605 4.34e-40 160
Msa0822180 AT2G35340.1 38.776 196 107 2 184 379 401 583 4.12e-38 154
Msa0822180 AT2G35340.2 38.776 196 107 2 184 379 263 445 4.81e-38 154
Msa0822180 AT2G47250.1 37.264 212 118 3 179 386 57 257 1.17e-37 151
Msa0822180 AT4G16680.1 38.889 216 111 4 184 391 212 414 5.19e-37 149
Msa0822180 AT4G16680.2 38.889 216 111 4 184 391 132 334 1.08e-36 149
Msa0822180 AT3G26560.1 38.500 200 110 2 184 383 512 698 5.15e-35 145
Msa0822180 AT3G62310.3 34.783 207 120 3 184 386 58 253 6.96e-35 141
Msa0822180 AT3G62310.1 34.783 207 120 3 184 386 58 253 1.22e-34 142
Msa0822180 AT3G62310.2 34.783 207 120 3 184 386 58 253 1.25e-34 140
Msa0822180 AT1G27900.3 37.500 200 111 4 185 383 2 188 5.80e-34 138
Msa0822180 AT1G27900.2 37.500 200 111 4 185 383 2 188 7.98e-34 138
Msa0822180 AT1G27900.1 37.500 200 111 4 185 383 2 188 1.42e-33 139
Msa0822180 AT5G13010.1 34.562 217 122 5 172 383 540 741 1.73e-32 137
Msa0822180 AT4G18465.1 34.821 224 116 6 184 389 45 256 6.19e-31 130
Msa0822180 AT3G49660.1 29.719 249 160 6 626 872 77 312 2.04e-27 114
Msa0822180 AT1G33390.2 31.120 241 124 5 174 383 228 457 3.52e-26 116
Msa0822180 AT1G33390.1 31.120 241 124 5 174 383 228 457 3.52e-26 116
Msa0822180 AT1G26370.1 30.165 242 114 5 184 383 38 266 4.79e-25 112
Msa0822180 AT4G02730.1 29.078 282 164 8 626 872 49 329 1.85e-23 103
Msa0822180 AT5G10370.1 32.014 278 154 7 108 383 246 490 5.88e-23 106
Msa0822180 AT4G01020.1 35.096 208 121 4 177 383 293 487 6.20e-23 106
Msa0822180 AT2G47680.1 33.784 222 122 5 185 396 24 230 6.67e-23 105
Msa0822180 AT5G25150.1 28.824 170 109 2 623 791 463 621 7.13e-15 79.3
Msa0822180 AT5G25150.1 22.222 279 190 7 628 888 360 629 1.64e-12 72.0
Msa0822180 AT5G25150.2 28.824 170 109 2 623 791 463 621 7.47e-15 79.3
Msa0822180 AT5G25150.2 22.222 279 190 7 628 888 360 629 1.90e-12 71.6
Msa0822180 AT2G43770.1 22.549 306 179 9 613 871 46 340 2.76e-14 75.9
Msa0822180 AT1G71840.1 23.774 265 181 6 631 889 82 331 2.86e-14 76.3
Msa0822180 AT5G13480.2 24.254 268 181 9 612 875 169 418 7.96e-14 75.9
Msa0822180 AT2G41500.1 24.609 256 175 7 619 872 254 493 8.95e-14 75.5
Msa0822180 AT2G41500.2 24.609 256 175 7 619 872 254 493 8.95e-14 75.5
Msa0822180 AT5G13480.3 24.254 268 181 9 612 875 146 395 1.07e-13 75.5
Msa0822180 AT5G13480.1 24.254 268 181 9 612 875 158 407 1.14e-13 75.5
Msa0822180 AT5G13480.4 24.254 268 181 9 612 875 146 395 1.24e-13 75.5
Msa0822180 AT5G56130.1 24.671 304 161 11 626 876 26 314 2.10e-12 69.7
Msa0822180 AT5G67320.1 23.810 294 152 9 593 874 244 477 4.47e-12 70.5
Msa0822180 AT4G33270.1 24.883 213 137 8 688 882 153 360 2.68e-11 67.4
Msa0822180 AT4G33260.1 24.883 213 137 8 688 882 143 350 3.09e-11 67.0
Msa0822180 AT4G33260.2 24.883 213 137 8 688 882 143 350 3.19e-11 67.0
Msa0822180 AT5G23430.1 26.178 191 135 4 688 877 32 217 3.46e-11 67.8
Msa0822180 AT5G23430.3 26.178 191 135 4 688 877 32 217 3.74e-11 67.8
Msa0822180 AT5G23430.2 26.178 191 135 4 688 877 32 217 3.74e-11 67.8
Msa0822180 AT2G32700.7 25.911 247 162 9 628 872 537 764 4.32e-11 67.4
Msa0822180 AT2G32700.6 26.316 247 161 9 628 872 516 743 4.84e-11 67.4
Msa0822180 AT2G32700.2 26.316 247 161 9 628 872 518 745 5.15e-11 67.0
Msa0822180 AT2G32700.5 26.316 247 161 9 628 872 518 745 5.15e-11 67.0
Msa0822180 AT2G32700.1 26.316 247 161 9 628 872 518 745 5.15e-11 67.0
Msa0822180 AT2G32700.4 26.316 247 161 9 628 872 518 745 5.15e-11 67.0
Msa0822180 AT2G32700.3 26.316 247 161 9 628 872 518 745 5.15e-11 67.0
Msa0822180 AT5G64730.1 21.739 299 180 7 614 872 13 297 5.79e-11 65.1
Msa0822180 AT5G08390.1 24.607 191 138 4 688 877 32 217 8.29e-11 66.6

Find 215 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGGTCCCACAATATATTT+TGG 0.151600 5_3:+60522442 Msa0822180:intron
TATTCCAAAGATTAATTTCT+TGG 0.164363 5_3:-60527174 None:intergenic
TCAGGTCAAAACATACTATT+TGG 0.178819 5_3:+60524795 Msa0822180:intron
AACTGGCCTTACACCGTTAA+TGG 0.185838 5_3:+60525023 Msa0822180:CDS
CTTTGATGAAGCTATTAATT+TGG 0.186777 5_3:+60524915 Msa0822180:CDS
ATCACTCCCACCCTTCTTAT+TGG 0.200185 5_3:-60521422 None:intergenic
ATCGCTTAAGATTTCTGATT+TGG 0.214294 5_3:+60526989 Msa0822180:CDS
CAAAACAACATCAACTATTT+CGG 0.218158 5_3:-60525259 None:intergenic
TAGCGCAGTTGTTCCGTCTT+TGG 0.225785 5_3:-60525118 None:intergenic
GTACTACTGGAGTTCTATTA+AGG 0.228115 5_3:+60523501 Msa0822180:CDS
ATTAAGGGTGTTGGTTTCTA+AGG 0.229619 5_3:+60523517 Msa0822180:CDS
CCTGGTAGATTCATCGATTT+TGG 0.234367 5_3:-60520312 None:intergenic
TTGGCGCAGATTGCAATTTA+AGG 0.237449 5_3:+60525094 Msa0822180:CDS
AACCCATTTCTTCTGTTTCA+TGG 0.245339 5_3:+60526742 Msa0822180:CDS
AAACAGAAGAAATGGGTTTC+TGG 0.247488 5_3:-60526737 None:intergenic
AATTATCAGCATTCTTTAAC+TGG 0.263056 5_3:+60525006 Msa0822180:CDS
TGCTGATAATTGAAGAGTTC+TGG 0.265951 5_3:-60524994 None:intergenic
TTTATTATTTCAGCAGCTTC+TGG 0.268250 5_3:-60525165 None:intergenic
AGTGGGAAACATATACTTTC+TGG 0.294428 5_3:+60526897 Msa0822180:CDS
ATGACCGTACAATTCGGATA+TGG 0.302803 5_3:+60527789 Msa0822180:CDS
AGATGAAATTACTCGGAAAT+TGG 0.304460 5_3:+60521630 Msa0822180:CDS
AAGCCTGGAACTTGGATAAC+TGG 0.306634 5_3:-60524674 None:intergenic
TTCCCCAATTCTACCTCTTC+CGG 0.307027 5_3:-60525052 None:intergenic
ATGTGCATGCTCTTATCTTT+TGG 0.319398 5_3:+60525075 Msa0822180:CDS
CTTAAATCTTGCTAGCTTGT+TGG 0.320913 5_3:-60520273 None:intergenic
TGAACCAAGAAATTAATCTT+TGG 0.323203 5_3:+60527170 Msa0822180:CDS
TGACATCACTCACATCATTA+TGG 0.332230 5_3:+60523583 Msa0822180:CDS
GGCGCTCGAGGTTTATTATA+AGG 0.334980 5_3:+60527239 Msa0822180:CDS
GAGGCACTGCCTGGTCATTC+AGG 0.344214 5_3:+60527707 Msa0822180:CDS
GTCGACCACGTCGAACAAAA+AGG 0.345440 5_3:+60520250 Msa0822180:CDS
ATGATCAAACTGCAATCATC+TGG 0.349518 5_3:+60526404 Msa0822180:CDS
CTGGCTTAGTCTCCTGTACA+TGG 0.354065 5_3:+60526868 Msa0822180:CDS
GATTTCTGATTTGGATATAA+CGG 0.356904 5_3:+60526998 Msa0822180:CDS
AGACGTAGATGAGGATATAA+AGG 0.360353 5_3:-60524449 None:intergenic
ACTCCATGAAACAGAAGAAA+TGG 0.360475 5_3:-60526745 None:intergenic
AAAACAACATCAACTATTTC+GGG 0.363646 5_3:-60525258 None:intergenic
GGGTTTAAGTCTAAAAGTTA+TGG 0.364494 5_3:+60521257 Msa0822180:CDS
ATTTGCATGTGGGAATTAGA+TGG 0.371375 5_3:+60526936 Msa0822180:CDS
TCTTCCTCATTTCACATTCT+CGG 0.373502 5_3:+60521459 Msa0822180:CDS
AAGCAGGTAGTTCTCATATC+TGG 0.375216 5_3:+60522155 Msa0822180:intron
TGGAAGCTGTAACTTCTAGA+AGG 0.380592 5_3:+60521650 Msa0822180:CDS
GTGAGGAGCTCTTCGTCATT+AGG 0.382343 5_3:-60526768 None:intergenic
TGCCCAGTTATCCAAGTTCC+AGG 0.382981 5_3:+60524671 Msa0822180:CDS
CTTCTTTGTAGGTCTACATA+TGG 0.393962 5_3:+60527660 Msa0822180:intron
TTGGATTATATGTGGGGTAA+GGG 0.400723 5_3:+60522461 Msa0822180:CDS
TTGCCGGAAGAGGTAGAATT+GGG 0.401573 5_3:+60525049 Msa0822180:CDS
TCTATTGTTCTATGTACTAC+TGG 0.404227 5_3:+60523488 Msa0822180:CDS
ATTATAAGGTCTTGCTTTGG+TGG 0.406114 5_3:+60527253 Msa0822180:CDS
CTTATCATGTGATTGTTTGT+TGG 0.409380 5_3:-60524874 None:intergenic
TTTGGATTATATGTGGGGTA+AGG 0.410615 5_3:+60522460 Msa0822180:CDS
TTTGCCGGAAGAGGTAGAAT+TGG 0.410715 5_3:+60525048 Msa0822180:CDS
AGAGAGAGAGGTGAGGCTGC+TGG 0.411317 5_3:+60522642 Msa0822180:CDS
GTGGAGTGGAGGAATCTATT+AGG 0.413571 5_3:+60526793 Msa0822180:CDS
GATCATATCTCTGCATTCAA+TGG 0.417789 5_3:+60525422 Msa0822180:CDS
GCATTCAATGGTTCCAACCT+TGG 0.417827 5_3:+60525434 Msa0822180:CDS
GCTGATAATTGAAGAGTTCT+GGG 0.419064 5_3:-60524993 None:intergenic
ATAAATTTGGAGACACTTGC+CGG 0.419366 5_3:-60526832 None:intergenic
TTTATTATAAGGTCTTGCTT+TGG 0.419821 5_3:+60527250 Msa0822180:CDS
GGTTTAAGTCTAAAAGTTAT+GGG 0.423476 5_3:+60521258 Msa0822180:CDS
GCTAACATGTGGGGATTAGC+TGG 0.424867 5_3:-60527755 None:intergenic
TGCAAAACGACGGTCATCAT+TGG 0.428088 5_3:-60521213 None:intergenic
TTGTACTTCCCAATGAGCTT+AGG 0.432048 5_3:-60527208 None:intergenic
CGTGTAAAGCATAGATTATC+TGG 0.433494 5_3:+60526711 Msa0822180:CDS
AGAGAAAGAAAGGTTGTTCA+AGG 0.437394 5_3:-60520185 None:intergenic
TACTACTGGAGTTCTATTAA+GGG 0.441536 5_3:+60523502 Msa0822180:CDS
TACATATGGCACCGAAGCTC+AGG 0.443665 5_3:+60527674 Msa0822180:CDS
GTGGGACCTACTGTCAGAAT+TGG 0.443943 5_3:+60524954 Msa0822180:CDS
AGTTCCAGGCTTCACTTATC+CGG 0.446106 5_3:+60524685 Msa0822180:CDS
ACACCGTTAATGGTGTTTGC+CGG 0.446621 5_3:+60525033 Msa0822180:CDS
TGACCGTACAATTCGGATAT+GGG 0.450477 5_3:+60527790 Msa0822180:CDS
ATTAATCTTTGGAATATTGA+AGG 0.452243 5_3:+60527181 Msa0822180:CDS
TTTCAATCTTCTGATGAAGA+AGG 0.456287 5_3:+60520362 Msa0822180:CDS
AAACACAGCAGCAGCAGCTA+TGG 0.457598 5_3:+60520150 Msa0822180:five_prime_UTR
CGGCGTATCTCTGCAATGTC+AGG 0.459055 5_3:+60522515 Msa0822180:CDS
TGGAGTTCTATTAAGGGTGT+TGG 0.459657 5_3:+60523508 Msa0822180:CDS
GAAGGCGATCCTAAGCTCAT+TGG 0.460407 5_3:+60527199 Msa0822180:CDS
CAAACACCATTAACGGTGTA+AGG 0.461307 5_3:-60525029 None:intergenic
GATAAGTGAAGCCTGGAACT+TGG 0.461806 5_3:-60524682 None:intergenic
TGCGCTAGAGATTGCTGAAA+GGG 0.462165 5_3:+60525134 Msa0822180:CDS
CTTCCGGCAAACACCATTAA+CGG 0.463274 5_3:-60525036 None:intergenic
GAAGAGTTCTGGGGTTCCTT+CGG 0.463538 5_3:-60524983 None:intergenic
ATGGGAAAGAAGTGGAGTCT+TGG 0.463584 5_3:+60526955 Msa0822180:CDS
AAGTTCCTCCATTGCAGTAA+TGG 0.463877 5_3:-60527862 None:intergenic
TTAAGGGTGTTGGTTTCTAA+GGG 0.466090 5_3:+60523518 Msa0822180:CDS
GCGTCGAATAATTCGAACTT+TGG 0.467161 5_3:+60520334 Msa0822180:CDS
ATGAAGCTATTAATTTGGCT+TGG 0.469167 5_3:+60524920 Msa0822180:CDS
ACCTGGTGATGGAAACTTGA+AGG 0.469278 5_3:+60521525 Msa0822180:CDS
TCCAACCTTGGAGCAAAAGA+AGG 0.473159 5_3:+60525446 Msa0822180:CDS
CTATCGGCTCTCCTGAGCTT+CGG 0.473900 5_3:-60527685 None:intergenic
ATATGTACTGATTCAAAAGA+TGG 0.474057 5_3:+60525303 Msa0822180:CDS
TGAATCGAAGAGAGAAAGAA+AGG 0.474831 5_3:-60520195 None:intergenic
AAGGCGATCCTAAGCTCATT+GGG 0.475240 5_3:+60527200 Msa0822180:CDS
TGGATTATATGTGGGGTAAG+GGG 0.477150 5_3:+60522462 Msa0822180:CDS
GGAGGAATCTATTAGGCGTT+GGG 0.480100 5_3:+60526800 Msa0822180:CDS
CACAGCAGCAGCAGCTATGG+CGG 0.480125 5_3:+60520153 Msa0822180:five_prime_UTR
CCAGTGATGACCGTACAATT+CGG 0.481345 5_3:+60527783 Msa0822180:CDS
TTTATATCCTCATCTACGTC+TGG 0.483477 5_3:+60524451 Msa0822180:CDS
TGATGGAAACTTGAAGGATC+TGG 0.485301 5_3:+60521531 Msa0822180:CDS
TCCTTCAAGTTTCCATCACC+AGG 0.489330 5_3:-60521526 None:intergenic
TTGGGAAGTACAAAGGTCAT+AGG 0.494292 5_3:+60527218 Msa0822180:CDS
AGTTCGAATTATTCGACGCC+TGG 0.495276 5_3:-60520330 None:intergenic
CATTCTCGGAAGAGTCAAAA+CGG 0.495959 5_3:+60521473 Msa0822180:CDS
CCAACATGAAGTCTGAATAT+CGG 0.496078 5_3:-60523920 None:intergenic
TCAGGATGAAATTCATGAAA+GGG 0.498098 5_3:+60523896 Msa0822180:intron
GGATTATATGTGGGGTAAGG+GGG 0.498239 5_3:+60522463 Msa0822180:CDS
GTCAGAAATTTCATCCTTCG+CGG 0.498896 5_3:-60523564 None:intergenic
AGAAAATCTCGCAGTATCAA+TGG 0.500493 5_3:-60524633 None:intergenic
TTAATGGTGTTTGCCGGAAG+AGG 0.506210 5_3:+60525039 Msa0822180:CDS
GGAAGAGTCAAAACGGGCAA+TGG 0.507368 5_3:+60521480 Msa0822180:CDS
CCGAATTGTACGGTCATCAC+TGG 0.507746 5_3:-60527783 None:intergenic
CACATGATGATGAGGAGGTA+TGG 0.509316 5_3:+60526335 Msa0822180:CDS
GTTCTCATATCTGGTGAGAC+TGG 0.511204 5_3:+60522164 Msa0822180:CDS
AGGCGTTGGGATGTTTCTAC+CGG 0.511324 5_3:+60526813 Msa0822180:CDS
TGGAGGAATCTATTAGGCGT+TGG 0.513191 5_3:+60526799 Msa0822180:CDS
GCAGAGTACAAGTTTGAAGC+TGG 0.513941 5_3:+60521185 Msa0822180:intron
TTATTTCAGCAGCTTCTGGT+TGG 0.515110 5_3:-60525161 None:intergenic
TTCAGGATGAAATTCATGAA+AGG 0.519015 5_3:+60523895 Msa0822180:intron
CTCCATGAAACAGAAGAAAT+GGG 0.519066 5_3:-60526744 None:intergenic
GAAGAGTCAAAACGGGCAAT+GGG 0.522524 5_3:+60521481 Msa0822180:CDS
TCAGAATTGGTTTCTTCCGA+AGG 0.529870 5_3:+60524967 Msa0822180:CDS
TATAATCCAAAATATATTGT+GGG 0.534277 5_3:-60522448 None:intergenic
GAAAGTATATGTTTCCCACT+TGG 0.535435 5_3:-60526894 None:intergenic
AAGCTCAGGAGAGCCGATAG+AGG 0.539387 5_3:+60527688 Msa0822180:CDS
GACGTAGATGAGGATATAAA+GGG 0.540193 5_3:-60524448 None:intergenic
TTTGCATGTGGGAATTAGAT+GGG 0.543867 5_3:+60526937 Msa0822180:CDS
TGGAGAAAATGTTGGATACA+AGG 0.545298 5_3:+60522662 Msa0822180:CDS
GGTCAAAACATACTATTTGG+AGG 0.545786 5_3:+60524798 Msa0822180:intron
ACTCTGCTCTTCTGTCGAGC+TGG 0.546153 5_3:-60525205 None:intergenic
CAACATCAACTATTTCGGGT+TGG 0.547694 5_3:-60525254 None:intergenic
GCATCCTTGTAAGATGCAAT+CGG 0.548739 5_3:-60521885 None:intergenic
GTGATAAGAGCATTTGCATG+TGG 0.550089 5_3:+60526925 Msa0822180:CDS
TCAGAAATTTCATCCTTCGC+GGG 0.550635 5_3:-60523563 None:intergenic
AGATACTTTGCACTCAGCCT+CGG 0.550947 5_3:+60522495 Msa0822180:CDS
ATTCTCGGAAGAGTCAAAAC+GGG 0.554446 5_3:+60521474 Msa0822180:CDS
GGTTCGAAAAGCCAATAAGA+AGG 0.558093 5_3:+60521411 Msa0822180:CDS
TGGGAAGGAGAGGAGATTGT+CGG 0.558526 5_3:+60521390 Msa0822180:CDS
ATATAATCCAAAATATATTG+TGG 0.559439 5_3:-60522449 None:intergenic
AGTACCGGATAAGTGAAGCC+TGG 0.560241 5_3:-60524689 None:intergenic
CCTGTACATGGTTTCCAAGT+GGG 0.561775 5_3:+60526880 Msa0822180:CDS
GAAAGAATCTCTAGAGAGAG+AGG 0.563993 5_3:+60522630 Msa0822180:CDS
CTGCGCTAGAGATTGCTGAA+AGG 0.565244 5_3:+60525133 Msa0822180:CDS
GAGCAAGCTTTCGTTGCAAG+TGG 0.568125 5_3:+60527280 Msa0822180:CDS
AAGTGGAAGTGAGGATTCAC+AGG 0.569174 5_3:+60527297 Msa0822180:CDS
TGTGTAGGACTGGGAAGGAG+AGG 0.570622 5_3:+60521380 Msa0822180:intron
AGCCTGGAACTTGGATAACT+GGG 0.571228 5_3:-60524673 None:intergenic
GAGCCGATAGAGGCACTGCC+TGG 0.571510 5_3:+60527698 Msa0822180:CDS
CCCACTTGGAAACCATGTAC+AGG 0.572154 5_3:-60526880 None:intergenic
CAAATTAATAGCTTCATCAA+AGG 0.573829 5_3:-60524914 None:intergenic
TGATCAAACTGCAATCATCT+GGG 0.573879 5_3:+60526405 Msa0822180:CDS
GACTGTATCTGACTTGAAAG+AGG 0.575980 5_3:+60521675 Msa0822180:CDS
GGAAGCTGTAACTTCTAGAA+GGG 0.577224 5_3:+60521651 Msa0822180:CDS
GGCTTGGTCTAATGATGAGT+GGG 0.578337 5_3:+60524936 Msa0822180:CDS
CCAAAATCGATGAATCTACC+AGG 0.579340 5_3:+60520312 Msa0822180:CDS
GTAAAATCAAGCAATGATGA+TGG 0.581090 5_3:+60524835 Msa0822180:CDS
ACTGGCAGAGGCTAACATGT+GGG 0.581947 5_3:-60527765 None:intergenic
GTTTGTTGGAATACTAAATG+TGG 0.584665 5_3:-60524860 None:intergenic
ATCAGCAGTTGAATCTCACC+AGG 0.588388 5_3:+60521914 Msa0822180:CDS
TTTGGAGGATGTACTTTCTG+CGG 0.588477 5_3:+60524813 Msa0822180:CDS
TGCAATTTAAGGTCCAAAGA+CGG 0.588850 5_3:+60525105 Msa0822180:CDS
CCGATATTCAGACTTCATGT+TGG 0.589369 5_3:+60523920 Msa0822180:CDS
GCTACCGATTGCATCTTACA+AGG 0.590410 5_3:+60521881 Msa0822180:CDS
GGCATCCATTACTGCAATGG+AGG 0.591892 5_3:+60527857 Msa0822180:CDS
GGAATTAGATGGGAAAGAAG+TGG 0.592587 5_3:+60526947 Msa0822180:CDS
TTTCGTTGCAAGTGGAAGTG+AGG 0.593078 5_3:+60527288 Msa0822180:CDS
ACTTCATGTTGGCAATAATG+AGG 0.594931 5_3:+60523931 Msa0822180:CDS
GTATAGCTAACGCAAGACAT+AGG 0.595255 5_3:+60521572 Msa0822180:CDS
TGTACGGTCATCACTGGCAG+AGG 0.595492 5_3:-60527777 None:intergenic
GAGGCTGCTGGAGAAAATGT+TGG 0.595937 5_3:+60522654 Msa0822180:CDS
ATATCTGGTGAGACTGGCTG+TGG 0.596856 5_3:+60522170 Msa0822180:CDS
CTTAGAAACACATGATGATG+AGG 0.596962 5_3:+60526327 Msa0822180:CDS
GACGAAGAGCTCCTCACATG+TGG 0.597893 5_3:+60526774 Msa0822180:CDS
GCTCCTCACATGTGGAGTGG+AGG 0.600384 5_3:+60526782 Msa0822180:CDS
TGCCATTGCTGTGCGCATGT+TGG 0.601143 5_3:-60527838 None:intergenic
TCTTCCGAGAATGTGAAATG+AGG 0.601540 5_3:-60521463 None:intergenic
CGAAAAGCCAATAAGAAGGG+TGG 0.602258 5_3:+60521415 Msa0822180:CDS
TGGTTTCTAAGGGTTCTCGT+CGG 0.608074 5_3:+60523528 Msa0822180:CDS
GAGCTGTTAATTGTGTGAGC+TGG 0.609857 5_3:+60527729 Msa0822180:CDS
TGACCAGGCAGTGCCTCTAT+CGG 0.611974 5_3:-60527701 None:intergenic
CAGATACGCTTAGATAGCAA+AGG 0.615701 5_3:+60523452 Msa0822180:intron
AAGAAACCAATTCTGACAGT+AGG 0.616932 5_3:-60524960 None:intergenic
AATGGCATCCATTACTGCAA+TGG 0.618205 5_3:+60527854 Msa0822180:CDS
GGCCCCATATCCGAATTGTA+CGG 0.618933 5_3:-60527793 None:intergenic
TGATAAGAGCATTTGCATGT+GGG 0.619083 5_3:+60526926 Msa0822180:CDS
ATAATAAAGAAACACATGGA+TGG 0.620086 5_3:+60525180 Msa0822180:CDS
AAGCTCATTGGGAAGTACAA+AGG 0.624344 5_3:+60527211 Msa0822180:CDS
GACCGTACAATTCGGATATG+GGG 0.628939 5_3:+60527791 Msa0822180:CDS
AGAGCTCCTCACATGTGGAG+TGG 0.631004 5_3:+60526779 Msa0822180:CDS
CACTGGCAGAGGCTAACATG+TGG 0.632424 5_3:-60527766 None:intergenic
CTGGCAGAGGCTAACATGTG+GGG 0.632842 5_3:-60527764 None:intergenic
ACAAAGGTCATAGGCGCTCG+AGG 0.635818 5_3:+60527227 Msa0822180:CDS
GAAAAGCCAATAAGAAGGGT+GGG 0.636827 5_3:+60521416 Msa0822180:CDS
AAAGAAGTGGAGTCTTGGAA+AGG 0.636859 5_3:+60526960 Msa0822180:CDS
TCCTGTACATGGTTTCCAAG+TGG 0.639029 5_3:+60526879 Msa0822180:CDS
TGACAAAAGATGAAATTACT+CGG 0.639079 5_3:+60521623 Msa0822180:CDS
GGAAACTTGAAGGATCTGGT+TGG 0.640249 5_3:+60521535 Msa0822180:CDS
AGAAACACATGATGATGAGG+AGG 0.643506 5_3:+60526330 Msa0822180:CDS
TTAACAGCTCCTGAATGACC+AGG 0.643672 5_3:-60527716 None:intergenic
TACCAACATGCGCACAGCAA+TGG 0.645886 5_3:+60527836 Msa0822180:CDS
GTCAATGAAGAATCCCGCGA+AGG 0.649567 5_3:+60523550 Msa0822180:CDS
ATACGCTTAGATAGCAAAGG+TGG 0.651068 5_3:+60523455 Msa0822180:CDS
CCAATAAATGTGCAAAACGA+CGG 0.652431 5_3:-60521223 None:intergenic
GTTCGAAAAGCCAATAAGAA+GGG 0.653407 5_3:+60521412 Msa0822180:CDS
TGTACTGATTCAAAAGATGG+AGG 0.653979 5_3:+60525306 Msa0822180:CDS
CTGATAATTGAAGAGTTCTG+GGG 0.658035 5_3:-60524992 None:intergenic
ATTCCTCCACTCCACATGTG+AGG 0.658511 5_3:-60526785 None:intergenic
TGGCTTGGTCTAATGATGAG+TGG 0.659097 5_3:+60524935 Msa0822180:CDS
TAACTGACCAGACGTAGATG+AGG 0.661853 5_3:-60524458 None:intergenic
AATCTCTAGAGAGAGAGGTG+AGG 0.664499 5_3:+60522635 Msa0822180:CDS
TGAAATAATAAAGAAACACA+TGG 0.667441 5_3:+60525176 Msa0822180:CDS
TGCCGGAAGAGGTAGAATTG+GGG 0.677012 5_3:+60525050 Msa0822180:CDS
TTCAAGTTTCCATCACCAGG+TGG 0.683429 5_3:-60521523 None:intergenic
TGGCTGTGGAAAGACTACTC+AGG 0.708313 5_3:+60522184 Msa0822180:CDS
TCAAACTGCAATCATCTGGG+AGG 0.712903 5_3:+60526408 Msa0822180:CDS
GACATTGCAGAGATACGCCG+AGG 0.717734 5_3:-60522512 None:intergenic
GATCTGGTTGGAGAAAAGAG+TGG 0.731307 5_3:+60521547 Msa0822180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATATTTTGTTGATAAAA+CGG - chr5_3:60520413-60520432 None:intergenic 10.0%
!! TTTATCAACAAAATATTATA+TGG + chr5_3:60520414-60520433 Msa0822180:intron 10.0%
!! TTATCAACAAAATATTATAT+GGG + chr5_3:60520415-60520434 Msa0822180:intron 10.0%
!!! CTTTTTGTTTTTTTATTAAT+TGG + chr5_3:60520476-60520495 Msa0822180:intron 10.0%
!!! TAAAATAAAGTTTTTTTACA+GGG + chr5_3:60521059-60521078 Msa0822180:intron 10.0%
!!! ATTGTTTATTTTTAAGTTAT+AGG - chr5_3:60523431-60523450 None:intergenic 10.0%
!!! TTTATAGAATTTTTACTATA+AGG - chr5_3:60526014-60526033 None:intergenic 10.0%
!! AGATTAAAAATAATATAGAT+AGG - chr5_3:60526120-60526139 None:intergenic 10.0%
!! TAAACCTAAATAATTTCATT+GGG - chr5_3:60520584-60520603 None:intergenic 15.0%
!! TTAAACCTAAATAATTTCAT+TGG - chr5_3:60520585-60520604 None:intergenic 15.0%
!!! AAATTGATTCATATTGAAAT+TGG - chr5_3:60520983-60521002 None:intergenic 15.0%
!!! CTAAAATAAAGTTTTTTTAC+AGG + chr5_3:60521058-60521077 Msa0822180:intron 15.0%
!!! TTATTATAATTTGTTGCTAA+CGG + chr5_3:60522256-60522275 Msa0822180:intron 15.0%
!!! TTAATATTAATTACTGATTC+AGG + chr5_3:60522424-60522443 Msa0822180:intron 15.0%
!! TATAATCCAAAATATATTGT+GGG - chr5_3:60522451-60522470 None:intergenic 15.0%
!! ATATAATCCAAAATATATTG+TGG - chr5_3:60522452-60522471 None:intergenic 15.0%
!!! AATATATTTTGGATTATATG+TGG + chr5_3:60522453-60522472 Msa0822180:CDS 15.0%
!!! ATATATTTTGGATTATATGT+GGG + chr5_3:60522454-60522473 Msa0822180:CDS 15.0%
!!! TTGATAATAATTAAGTCATA+TGG - chr5_3:60523264-60523283 None:intergenic 15.0%
!! ATATGACTTAATTATTATCA+AGG + chr5_3:60523263-60523282 Msa0822180:intron 15.0%
!! TCATGTATTAGTAAAAATAA+GGG + chr5_3:60523314-60523333 Msa0822180:intron 15.0%
!!! ATCTAATAGCATAATTTTTA+GGG + chr5_3:60524088-60524107 Msa0822180:intron 15.0%
!!! CTTTCTTTATTTTTACTTTT+TGG + chr5_3:60524167-60524186 Msa0822180:intron 15.0%
!!! TTTATTTTTACTTTTTGGAT+AGG + chr5_3:60524172-60524191 Msa0822180:intron 15.0%
!! AACAGAAAAAAAAAATCTTT+CGG - chr5_3:60524345-60524364 None:intergenic 15.0%
!!! AAAGGATAATAAATTTTTGT+TGG + chr5_3:60527138-60527157 Msa0822180:intron 15.0%
!!! TTTGCAAAATAAAATTCTTT+TGG + chr5_3:60527380-60527399 Msa0822180:intron 15.0%
!! ATTAGATATAAAATGTAGTT+TGG + chr5_3:60527496-60527515 Msa0822180:intron 15.0%
!!! TTTGTTTTTATTTTCAAGCT+TGG + chr5_3:60520535-60520554 Msa0822180:intron 20.0%
!!! ACGTTCAATTTATTCATTTT+AGG + chr5_3:60520767-60520786 Msa0822180:intron 20.0%
!! TACTAACAAGTATGAAATAT+TGG - chr5_3:60520828-60520847 None:intergenic 20.0%
!! TATTTAAGCCAAATGTTTAT+TGG + chr5_3:60521092-60521111 Msa0822180:intron 20.0%
!! TATATCCATTTATGAAATCT+GGG + chr5_3:60521142-60521161 Msa0822180:intron 20.0%
!!! AATTTCATCTTTTGTCATTA+CGG - chr5_3:60521620-60521639 None:intergenic 20.0%
!! CAAAAAAATTCATATACACA+AGG - chr5_3:60521735-60521754 None:intergenic 20.0%
!!! CTTGTGTATATGAATTTTTT+TGG + chr5_3:60521733-60521752 Msa0822180:intron 20.0%
!! AATAAACATACTACAGAAAA+GGG - chr5_3:60521780-60521799 None:intergenic 20.0%
!! AAATAAACATACTACAGAAA+AGG - chr5_3:60521781-60521800 None:intergenic 20.0%
!!! CATTGACATTTTAAATATGT+TGG + chr5_3:60522032-60522051 Msa0822180:intron 20.0%
!! AATTATAATAAATGACGTTG+TGG - chr5_3:60522247-60522266 None:intergenic 20.0%
!! CAAAAACTGTCAAAAAATAT+AGG - chr5_3:60522371-60522390 None:intergenic 20.0%
!!! TATATTTTGGATTATATGTG+GGG + chr5_3:60522455-60522474 Msa0822180:CDS 20.0%
!! TAATAGAAAGTAATGAACAA+AGG - chr5_3:60522728-60522747 None:intergenic 20.0%
!!! CACTTTTTTTATTGATATGT+TGG + chr5_3:60522878-60522897 Msa0822180:intron 20.0%
!! TTAAGTTATTGAATGTTGAA+GGG - chr5_3:60523036-60523055 None:intergenic 20.0%
!! GTCATGTATTAGTAAAAATA+AGG + chr5_3:60523313-60523332 Msa0822180:intron 20.0%
!! AAGACTTTGAATAATGATTA+TGG - chr5_3:60523377-60523396 None:intergenic 20.0%
!! ATAGGATATATCAGATAAAA+GGG - chr5_3:60523413-60523432 None:intergenic 20.0%
!! TATAGGATATATCAGATAAA+AGG - chr5_3:60523414-60523433 None:intergenic 20.0%
!! AGATATGTATTGTAAAAATG+AGG + chr5_3:60523856-60523875 Msa0822180:intron 20.0%
!! TAATGAGGTATAAATTTGAA+AGG + chr5_3:60523946-60523965 Msa0822180:intron 20.0%
!! TATTAGATGCAAATTATCTT+TGG - chr5_3:60524076-60524095 None:intergenic 20.0%
!!! CATCTAATAGCATAATTTTT+AGG + chr5_3:60524087-60524106 Msa0822180:intron 20.0%
!!! AGTTTTAACTTTTAAACAAG+TGG - chr5_3:60524246-60524265 None:intergenic 20.0%
!! TTAAAAGTTAAAACTCTTCA+AGG + chr5_3:60524251-60524270 Msa0822180:intron 20.0%
!! TATGATTTGAAAAAGAACTT+GGG - chr5_3:60524530-60524549 None:intergenic 20.0%
!! ATATGATTTGAAAAAGAACT+TGG - chr5_3:60524531-60524550 None:intergenic 20.0%
!! GTTAAAATATAAGCTGAAAT+GGG - chr5_3:60524565-60524584 None:intergenic 20.0%
!! TGAAATAATAAAGAAACACA+TGG + chr5_3:60525176-60525195 Msa0822180:CDS 20.0%
!!! TATCCAATTATGATAGATTT+TGG + chr5_3:60525662-60525681 Msa0822180:intron 20.0%
!! TTTCCAAAATCTATCATAAT+TGG - chr5_3:60525668-60525687 None:intergenic 20.0%
!!! TTTGTACAATTTTCACATAA+TGG + chr5_3:60526358-60526377 Msa0822180:CDS 20.0%
!!! TTGTACAATTTTCACATAAT+GGG + chr5_3:60526359-60526378 Msa0822180:CDS 20.0%
!!! GGGTTTTAGATTTTAATTTT+TGG + chr5_3:60526657-60526676 Msa0822180:intron 20.0%
!!! ATTTTTGGTCTTCTTTTTAA+AGG + chr5_3:60526672-60526691 Msa0822180:CDS 20.0%
!! AAGAAAAAGAAGTTATTGTT+TGG - chr5_3:60527114-60527133 None:intergenic 20.0%
!! TATTCCAAAGATTAATTTCT+TGG - chr5_3:60527177-60527196 None:intergenic 20.0%
!!! ATTAATCTTTGGAATATTGA+AGG + chr5_3:60527181-60527200 Msa0822180:CDS 20.0%
!! TTATCACTTTATGTCTTATA+AGG + chr5_3:60527414-60527433 Msa0822180:intron 20.0%
!! TATCACTTTATGTCTTATAA+GGG + chr5_3:60527415-60527434 Msa0822180:intron 20.0%
!!! AGTAAATATGGATTTTCTAA+AGG - chr5_3:60527441-60527460 None:intergenic 20.0%
!!! TACATTTTATATCTAATCTC+AGG - chr5_3:60527493-60527512 None:intergenic 20.0%
!!! ACTTTTTATTCAGACTATTA+AGG - chr5_3:60527817-60527836 None:intergenic 20.0%
!! GAATTGGATATTTGCATTTT+AGG + chr5_3:60520510-60520529 Msa0822180:intron 25.0%
! ATGACCCAATGAAATTATTT+AGG + chr5_3:60520577-60520596 Msa0822180:intron 25.0%
!!! TAATTGGTGTTTTGTTGTTT+TGG + chr5_3:60520876-60520895 Msa0822180:intron 25.0%
! CAACTAAAAACAAAACAAGA+AGG + chr5_3:60521005-60521024 Msa0822180:intron 25.0%
! TGACAATTCCAATAAACATT+TGG - chr5_3:60521103-60521122 None:intergenic 25.0%
! CTATATCCATTTATGAAATC+TGG + chr5_3:60521141-60521160 Msa0822180:intron 25.0%
! GGTTTAAGTCTAAAAGTTAT+GGG + chr5_3:60521258-60521277 Msa0822180:CDS 25.0%
! TTCAATGGAATAATTGGTAA+AGG + chr5_3:60521300-60521319 Msa0822180:intron 25.0%
!! ATTTCATCTTTTGTCATTAC+GGG - chr5_3:60521619-60521638 None:intergenic 25.0%
! TGACAAAAGATGAAATTACT+CGG + chr5_3:60521623-60521642 Msa0822180:CDS 25.0%
! ATAAACATACTACAGAAAAG+GGG - chr5_3:60521779-60521798 None:intergenic 25.0%
! TTGATTGTCAATAAATCACA+AGG + chr5_3:60522804-60522823 Msa0822180:intron 25.0%
! ATCATGTGATTGCAAAAAAT+TGG - chr5_3:60522844-60522863 None:intergenic 25.0%
! TAAAAGAAAGAAATGAGATG+AGG - chr5_3:60522993-60523012 None:intergenic 25.0%
! GTTAAGTTATTGAATGTTGA+AGG - chr5_3:60523037-60523056 None:intergenic 25.0%
! TTTACAATACATATCTTGCA+AGG - chr5_3:60523852-60523871 None:intergenic 25.0%
!! CAAGATTTAGTTTAACTCAA+TGG + chr5_3:60524133-60524152 Msa0822180:intron 25.0%
!! AAGTGATTATGTTAGTTTCT+AGG + chr5_3:60524206-60524225 Msa0822180:intron 25.0%
! AAAAAAAAAATCTTTCGGAG+GGG - chr5_3:60524340-60524359 None:intergenic 25.0%
! GAAAAAAAAAATCTTTCGGA+GGG - chr5_3:60524341-60524360 None:intergenic 25.0%
! AGAAAAAAAAAATCTTTCGG+AGG - chr5_3:60524342-60524361 None:intergenic 25.0%
! GGTTAAAATATAAGCTGAAA+TGG - chr5_3:60524566-60524585 None:intergenic 25.0%
!! TTTTAACCTTATCTGTTTTC+TGG + chr5_3:60524578-60524597 Msa0822180:intron 25.0%
!! CGAGATTTTCTCAATATTTT+GGG + chr5_3:60524645-60524664 Msa0822180:CDS 25.0%
!! GAGATTTTCTCAATATTTTG+GGG + chr5_3:60524646-60524665 Msa0822180:CDS 25.0%
!!! AGATTTTCTCAATATTTTGG+GGG + chr5_3:60524647-60524666 Msa0822180:CDS 25.0%
!!! TATTTGCTATTTCTTTCTTC+AGG + chr5_3:60524777-60524796 Msa0822180:intron 25.0%
! CAAATTAATAGCTTCATCAA+AGG - chr5_3:60524917-60524936 None:intergenic 25.0%
! CTTTGATGAAGCTATTAATT+TGG + chr5_3:60524915-60524934 Msa0822180:CDS 25.0%
! AATTATCAGCATTCTTTAAC+TGG + chr5_3:60525006-60525025 Msa0822180:CDS 25.0%
! ATAATAAAGAAACACATGGA+TGG + chr5_3:60525180-60525199 Msa0822180:CDS 25.0%
! AAAACAACATCAACTATTTC+GGG - chr5_3:60525261-60525280 None:intergenic 25.0%
! CAAAACAACATCAACTATTT+CGG - chr5_3:60525262-60525281 None:intergenic 25.0%
!!! ATATGTACTGATTCAAAAGA+TGG + chr5_3:60525303-60525322 Msa0822180:CDS 25.0%
!!! TGATGGATTATTGAAAAAAG+AGG - chr5_3:60525394-60525413 None:intergenic 25.0%
!! GATATGATCACAAATTTTGA+TGG - chr5_3:60525411-60525430 None:intergenic 25.0%
! ATCTGAGTTCACTAAATTAA+TGG + chr5_3:60525716-60525735 Msa0822180:intron 25.0%
! AACTAGACAAAATCTTCTAT+TGG + chr5_3:60525745-60525764 Msa0822180:intron 25.0%
!!! GTCACATTTTTTTAATACCA+GGG + chr5_3:60525899-60525918 Msa0822180:intron 25.0%
! TTACAACTAGGATTTCAAAT+TGG - chr5_3:60526524-60526543 None:intergenic 25.0%
! TGAAGGAAAAAATTACAACT+AGG - chr5_3:60526536-60526555 None:intergenic 25.0%
!!! AACCAGCTTTTTCATAAATT+TGG - chr5_3:60526848-60526867 None:intergenic 25.0%
!!! GATTTCTGATTTGGATATAA+CGG + chr5_3:60526998-60527017 Msa0822180:CDS 25.0%
!! AACTTCTTTTTCTTTGTCAA+AGG + chr5_3:60527120-60527139 Msa0822180:intron 25.0%
! TGAACCAAGAAATTAATCTT+TGG + chr5_3:60527170-60527189 Msa0822180:CDS 25.0%
! TTTATTATAAGGTCTTGCTT+TGG + chr5_3:60527250-60527269 Msa0822180:CDS 25.0%
! TACAAGATATTATCCTTCAA+AGG - chr5_3:60527359-60527378 None:intergenic 25.0%
!! ATCCATATTTACTTGTTTCT+AGG + chr5_3:60527448-60527467 Msa0822180:intron 25.0%
TTTCAATCTTCTGATGAAGA+AGG + chr5_3:60520362-60520381 Msa0822180:CDS 30.0%
!!! ATTGGGTGTTTTGTTTGAAT+TGG + chr5_3:60520494-60520513 Msa0822180:intron 30.0%
CCAATTACTAATAGCAGAAA+TGG - chr5_3:60520863-60520882 None:intergenic 30.0%
CCATTTCTGCTATTAGTAAT+TGG + chr5_3:60520860-60520879 Msa0822180:intron 30.0%
ACAAAACAAGAAGGATCAAA+AGG + chr5_3:60521014-60521033 Msa0822180:intron 30.0%
AAACACCCAGATTTCATAAA+TGG - chr5_3:60521150-60521169 None:intergenic 30.0%
ACATTTATTGGCCCAAAAAA+TGG + chr5_3:60521235-60521254 Msa0822180:CDS 30.0%
CATTTATTGGCCCAAAAAAT+GGG + chr5_3:60521236-60521255 Msa0822180:CDS 30.0%
ATTTATTGGCCCAAAAAATG+GGG + chr5_3:60521237-60521256 Msa0822180:CDS 30.0%
!!! AGACTTAAACCCCATTTTTT+GGG - chr5_3:60521249-60521268 None:intergenic 30.0%
!!! TAGACTTAAACCCCATTTTT+TGG - chr5_3:60521250-60521269 None:intergenic 30.0%
GGGTTTAAGTCTAAAAGTTA+TGG + chr5_3:60521257-60521276 Msa0822180:CDS 30.0%
CAGTTCTTCAATGGAATAAT+TGG + chr5_3:60521294-60521313 Msa0822180:intron 30.0%
AGATGAAATTACTCGGAAAT+TGG + chr5_3:60521630-60521649 Msa0822180:CDS 30.0%
AGCAAAAGAAAACATTAACC+TGG - chr5_3:60521935-60521954 None:intergenic 30.0%
ACCATGTGGATAAATTTCAA+AGG - chr5_3:60521969-60521988 None:intergenic 30.0%
!! CAATCTTCAAGTGTTGAAAT+TGG - chr5_3:60522089-60522108 None:intergenic 30.0%
CAATTTCAACACTTGAAGAT+TGG + chr5_3:60522087-60522106 Msa0822180:intron 30.0%
!! TTGATGTTTTTATCCAGCTT+TGG + chr5_3:60522309-60522328 Msa0822180:intron 30.0%
!! TGATGTTTTTATCCAGCTTT+GGG + chr5_3:60522310-60522329 Msa0822180:intron 30.0%
ATAGGTCCATATACAATGAT+GGG - chr5_3:60522353-60522372 None:intergenic 30.0%
TATAGGTCCATATACAATGA+TGG - chr5_3:60522354-60522373 None:intergenic 30.0%
TCAGAAACTAGACATAGAAT+GGG - chr5_3:60522612-60522631 None:intergenic 30.0%
TTCAGAAACTAGACATAGAA+TGG - chr5_3:60522613-60522632 None:intergenic 30.0%
AAAATTGTGAATTGAGTCGT+TGG - chr5_3:60522956-60522975 None:intergenic 30.0%
ACACGTGAGAATTATATGAA+AGG - chr5_3:60523139-60523158 None:intergenic 30.0%
TTCATGTTAAATCATCTCAC+AGG + chr5_3:60523199-60523218 Msa0822180:intron 30.0%
AGGTCTTTCCCTATTTAATT+AGG + chr5_3:60523283-60523302 Msa0822180:intron 30.0%
TTCCCTATTTAATTAGGATC+TGG + chr5_3:60523289-60523308 Msa0822180:intron 30.0%
CTCCAGATCCTAATTAAATA+GGG - chr5_3:60523294-60523313 None:intergenic 30.0%
ACTCCAGATCCTAATTAAAT+AGG - chr5_3:60523295-60523314 None:intergenic 30.0%
TCTATTGTTCTATGTACTAC+TGG + chr5_3:60523488-60523507 Msa0822180:CDS 30.0%
TACTACTGGAGTTCTATTAA+GGG + chr5_3:60523502-60523521 Msa0822180:CDS 30.0%
CATTCTATGTTCAAGAATCT+TGG + chr5_3:60523801-60523820 Msa0822180:intron 30.0%
TTCAGGATGAAATTCATGAA+AGG + chr5_3:60523895-60523914 Msa0822180:intron 30.0%
TCAGGATGAAATTCATGAAA+GGG + chr5_3:60523896-60523915 Msa0822180:intron 30.0%
! TTTTATGCTTGCTTATGCAA+CGG - chr5_3:60524031-60524050 None:intergenic 30.0%
TGCATAAGCAAGCATAAAAT+TGG + chr5_3:60524032-60524051 Msa0822180:intron 30.0%
GCATAAGCAAGCATAAAATT+GGG + chr5_3:60524033-60524052 Msa0822180:intron 30.0%
!!! CATAATTTTTAGGGTAGAGT+TGG + chr5_3:60524097-60524116 Msa0822180:intron 30.0%
! TTTAGTTTAACTCAATGGCA+TGG + chr5_3:60524138-60524157 Msa0822180:intron 30.0%
! ACTTTTAAACAAGTGGTTGA+GGG - chr5_3:60524239-60524258 None:intergenic 30.0%
! AACTTTTAAACAAGTGGTTG+AGG - chr5_3:60524240-60524259 None:intergenic 30.0%
AAAAAAAAATCTTTCGGAGG+GGG - chr5_3:60524339-60524358 None:intergenic 30.0%
! GCGAGATTTTCTCAATATTT+TGG + chr5_3:60524644-60524663 Msa0822180:CDS 30.0%
TCAATCTACTCTATAAGTAC+CGG - chr5_3:60524707-60524726 None:intergenic 30.0%
TCAGGTCAAAACATACTATT+TGG + chr5_3:60524795-60524814 Msa0822180:intron 30.0%
GTAAAATCAAGCAATGATGA+TGG + chr5_3:60524835-60524854 Msa0822180:CDS 30.0%
! GTTTGTTGGAATACTAAATG+TGG - chr5_3:60524863-60524882 None:intergenic 30.0%
CTTATCATGTGATTGTTTGT+TGG - chr5_3:60524877-60524896 None:intergenic 30.0%
! ATGAAGCTATTAATTTGGCT+TGG + chr5_3:60524920-60524939 Msa0822180:CDS 30.0%
TTTATTATTTCAGCAGCTTC+TGG - chr5_3:60525168-60525187 None:intergenic 30.0%
!!! TCCTTGTTTTTTTTTCAGGA+TGG + chr5_3:60525331-60525350 Msa0822180:CDS 30.0%
!!! CCTTGTTTTTTTTTCAGGAT+GGG + chr5_3:60525332-60525351 Msa0822180:CDS 30.0%
! NNNNNGAGAGGACAATTTTG+CGG - chr5_3:60525497-60525516 None:intergenic 30.0%
ATCACCAACAAGTAGTTAAT+CGG - chr5_3:60525643-60525662 None:intergenic 30.0%
TACTTCACGAATTGAGATTT+GGG - chr5_3:60525860-60525879 None:intergenic 30.0%
TTACTTCACGAATTGAGATT+TGG - chr5_3:60525861-60525880 None:intergenic 30.0%
! GTAACTTTTCTGTCAAAATG+TGG + chr5_3:60525877-60525896 Msa0822180:intron 30.0%
!!! GGTCACATTTTTTTAATACC+AGG + chr5_3:60525898-60525917 Msa0822180:intron 30.0%
!! AGTAACAAGTAGAGTATTGT+CGG - chr5_3:60525951-60525970 None:intergenic 30.0%
GGTTATTGAGTTCTTATTGA+AGG - chr5_3:60525993-60526012 None:intergenic 30.0%
GCATACATACTCATGTAAAT+GGG - chr5_3:60526061-60526080 None:intergenic 30.0%
GACTTCAATTTGATGAATGA+GGG - chr5_3:60526083-60526102 None:intergenic 30.0%
! GCTATATAGAAAGTAATGGA+GGG - chr5_3:60526250-60526269 None:intergenic 30.0%
AGCTATATAGAAAGTAATGG+AGG - chr5_3:60526251-60526270 None:intergenic 30.0%
TCGAGCTATATAGAAAGTAA+TGG - chr5_3:60526254-60526273 None:intergenic 30.0%
!!! CTGTTTTCATGCTTTTTTTC+TGG + chr5_3:60526471-60526490 Msa0822180:intron 30.0%
!! TTGGTCTTCTTTTTAAAGGT+TGG + chr5_3:60526676-60526695 Msa0822180:CDS 30.0%
!! TTTTTAAAGGTTGGCGTAAA+TGG + chr5_3:60526685-60526704 Msa0822180:CDS 30.0%
!! TTTTAAAGGTTGGCGTAAAT+GGG + chr5_3:60526686-60526705 Msa0822180:CDS 30.0%
CTCCAAATTTATGAAAAAGC+TGG + chr5_3:60526843-60526862 Msa0822180:CDS 30.0%
! ATTTATGAAAAAGCTGGTTC+TGG + chr5_3:60526849-60526868 Msa0822180:CDS 30.0%
ATCGCTTAAGATTTCTGATT+TGG + chr5_3:60526989-60527008 Msa0822180:CDS 30.0%
TTGAACAGCAATACTGTATT+GGG - chr5_3:60527055-60527074 None:intergenic 30.0%
ATTGAACAGCAATACTGTAT+TGG - chr5_3:60527056-60527075 None:intergenic 30.0%
GCTGTTCAATAAAGAAACAA+AGG + chr5_3:60527066-60527085 Msa0822180:intron 30.0%
ATAAAGAAACAAAGGATGAG+AGG + chr5_3:60527074-60527093 Msa0822180:intron 30.0%
CACCTAGAAACAAGTAAATA+TGG - chr5_3:60527453-60527472 None:intergenic 30.0%
CTACTATAATCAGAGATGTT+AGG - chr5_3:60527589-60527608 None:intergenic 30.0%
TGATTTCATTCCTTCTTTGT+AGG + chr5_3:60527649-60527668 Msa0822180:intron 30.0%
AGAGAAAGAAAGGTTGTTCA+AGG - chr5_3:60520188-60520207 None:intergenic 35.0%
TGAATCGAAGAGAGAAAGAA+AGG - chr5_3:60520198-60520217 None:intergenic 35.0%
! CTTAAATCTTGCTAGCTTGT+TGG - chr5_3:60520276-60520295 None:intergenic 35.0%
!!! GTAGATTCATCGATTTTGGT+AGG - chr5_3:60520311-60520330 None:intergenic 35.0%
AAACGGCGAAAAAAGCAAAA+GGG - chr5_3:60520396-60520415 None:intergenic 35.0%
AAAACGGCGAAAAAAGCAAA+AGG - chr5_3:60520397-60520416 None:intergenic 35.0%
!!! GGCTGTTTTCATTTTTTCGA+TGG + chr5_3:60520436-60520455 Msa0822180:intron 35.0%
TGTAACACCAACATTTCTGA+TGG + chr5_3:60520691-60520710 Msa0822180:intron 35.0%
ACACTTTCCATCAGAAATGT+TGG - chr5_3:60520701-60520720 None:intergenic 35.0%
! TTTCTGATGGAAAGTGTGTT+TGG + chr5_3:60520704-60520723 Msa0822180:intron 35.0%
CCAATAAATGTGCAAAACGA+CGG - chr5_3:60521226-60521245 None:intergenic 35.0%
TGGTAAAGGAAGAATGTGTT+TGG + chr5_3:60521314-60521333 Msa0822180:intron 35.0%
GTTCGAAAAGCCAATAAGAA+GGG + chr5_3:60521412-60521431 Msa0822180:CDS 35.0%
TCTTCCTCATTTCACATTCT+CGG + chr5_3:60521459-60521478 Msa0822180:CDS 35.0%
! TTATTTGCTCATTTTCCACC+TGG + chr5_3:60521508-60521527 Msa0822180:CDS 35.0%
!! TCTTTGAAGTTGAATGGAGA+GGG - chr5_3:60521712-60521731 None:intergenic 35.0%
!! ACAAGGTCTTTGAAGTTGAA+TGG - chr5_3:60521718-60521737 None:intergenic 35.0%
!! GCCTTTGAAATTTATCCACA+TGG + chr5_3:60521965-60521984 Msa0822180:intron 35.0%
AATTTATCCACATGGTAGCT+TGG + chr5_3:60521973-60521992 Msa0822180:intron 35.0%
AGTACTCCCATCATTGTATA+TGG + chr5_3:60522344-60522363 Msa0822180:intron 35.0%
GTCAAACAGAATGTTTCACA+TGG - chr5_3:60522398-60522417 None:intergenic 35.0%
! TCAGGTCCCACAATATATTT+TGG + chr5_3:60522442-60522461 Msa0822180:intron 35.0%
TTTGGATTATATGTGGGGTA+AGG + chr5_3:60522460-60522479 Msa0822180:CDS 35.0%
TTGGATTATATGTGGGGTAA+GGG + chr5_3:60522461-60522480 Msa0822180:CDS 35.0%
TGGAGAAAATGTTGGATACA+AGG + chr5_3:60522662-60522681 Msa0822180:CDS 35.0%
TTTGCGTTTCTTTGTAGCAA+TGG + chr5_3:60522693-60522712 Msa0822180:intron 35.0%
AATGAGATGAGGAAGAGAAA+AGG - chr5_3:60522982-60523001 None:intergenic 35.0%
GTACTACTGGAGTTCTATTA+AGG + chr5_3:60523501-60523520 Msa0822180:CDS 35.0%
!! ATTAAGGGTGTTGGTTTCTA+AGG + chr5_3:60523517-60523536 Msa0822180:CDS 35.0%
!! TTAAGGGTGTTGGTTTCTAA+GGG + chr5_3:60523518-60523537 Msa0822180:CDS 35.0%
TGACATCACTCACATCATTA+TGG + chr5_3:60523583-60523602 Msa0822180:CDS 35.0%
GTGACATTCATTTCTTGTTC+AGG + chr5_3:60523878-60523897 Msa0822180:intron 35.0%
CCAACATGAAGTCTGAATAT+CGG - chr5_3:60523923-60523942 None:intergenic 35.0%
ACTTCATGTTGGCAATAATG+AGG + chr5_3:60523931-60523950 Msa0822180:CDS 35.0%
! TCAGCTTTTACTTTCTACTG+TGG + chr5_3:60523975-60523994 Msa0822180:intron 35.0%
TTTATGCTTGCTTATGCAAC+GGG - chr5_3:60524030-60524049 None:intergenic 35.0%
GTAAGCTATTGTATCCATGT+AGG - chr5_3:60524301-60524320 None:intergenic 35.0%
AAAAAAAATCTTTCGGAGGG+GGG - chr5_3:60524338-60524357 None:intergenic 35.0%
TTGTGAGATCATTCGTCTTA+AGG + chr5_3:60524363-60524382 Msa0822180:intron 35.0%
GACGTAGATGAGGATATAAA+GGG - chr5_3:60524451-60524470 None:intergenic 35.0%
AGACGTAGATGAGGATATAA+AGG - chr5_3:60524452-60524471 None:intergenic 35.0%
TTTATATCCTCATCTACGTC+TGG + chr5_3:60524451-60524470 Msa0822180:CDS 35.0%
AACACACCAGAAAACAGATA+AGG - chr5_3:60524587-60524606 None:intergenic 35.0%
TTCTGGTGTGTTCTAATGTT+AGG + chr5_3:60524595-60524614 Msa0822180:intron 35.0%
AGAAAATCTCGCAGTATCAA+TGG - chr5_3:60524636-60524655 None:intergenic 35.0%
GGTCAAAACATACTATTTGG+AGG + chr5_3:60524798-60524817 Msa0822180:intron 35.0%
AAGAAACCAATTCTGACAGT+AGG - chr5_3:60524963-60524982 None:intergenic 35.0%
CTGATAATTGAAGAGTTCTG+GGG - chr5_3:60524995-60525014 None:intergenic 35.0%
GCTGATAATTGAAGAGTTCT+GGG - chr5_3:60524996-60525015 None:intergenic 35.0%
TGCTGATAATTGAAGAGTTC+TGG - chr5_3:60524997-60525016 None:intergenic 35.0%
! TGCAATTTAAGGTCCAAAGA+CGG + chr5_3:60525105-60525124 Msa0822180:CDS 35.0%
!! TGTACTGATTCAAAAGATGG+AGG + chr5_3:60525306-60525325 Msa0822180:CDS 35.0%
!!! GGCATCCTTGTTTTTTTTTC+AGG + chr5_3:60525327-60525346 Msa0822180:CDS 35.0%
CCCATCCTGAAAAAAAAACA+AGG - chr5_3:60525335-60525354 None:intergenic 35.0%
GATCATATCTCTGCATTCAA+TGG + chr5_3:60525422-60525441 Msa0822180:CDS 35.0%
! AAAAACCTTCTTTTGCTCCA+AGG - chr5_3:60525454-60525473 None:intergenic 35.0%
TCACCAACAAGTAGTTAATC+GGG - chr5_3:60525642-60525661 None:intergenic 35.0%
GAAAGAAAAACATCAAACCC+TGG - chr5_3:60525919-60525938 None:intergenic 35.0%
!! GTAACAAGTAGAGTATTGTC+GGG - chr5_3:60525950-60525969 None:intergenic 35.0%
ATACTCATGTAAATGGGCAT+GGG - chr5_3:60526055-60526074 None:intergenic 35.0%
GGCATACATACTCATGTAAA+TGG - chr5_3:60526062-60526081 None:intergenic 35.0%
GGACTTCAATTTGATGAATG+AGG - chr5_3:60526084-60526103 None:intergenic 35.0%
CGCTGTACTAAATAGCAAAA+GGG - chr5_3:60526222-60526241 None:intergenic 35.0%
TCGCTGTACTAAATAGCAAA+AGG - chr5_3:60526223-60526242 None:intergenic 35.0%
! TATAGAAAGTAATGGAGGGA+AGG - chr5_3:60526246-60526265 None:intergenic 35.0%
! CTTAGAAACACATGATGATG+AGG + chr5_3:60526327-60526346 Msa0822180:CDS 35.0%
ATGATCAAACTGCAATCATC+TGG + chr5_3:60526404-60526423 Msa0822180:CDS 35.0%
TGATCAAACTGCAATCATCT+GGG + chr5_3:60526405-60526424 Msa0822180:CDS 35.0%
!! TTTTGTGCATTGATGAGTGA+GGG - chr5_3:60526574-60526593 None:intergenic 35.0%
!! TTTTTGTGCATTGATGAGTG+AGG - chr5_3:60526575-60526594 None:intergenic 35.0%
! GTGCACTCACATTTAGAATA+TGG + chr5_3:60526617-60526636 Msa0822180:intron 35.0%
CGTGTAAAGCATAGATTATC+TGG + chr5_3:60526711-60526730 Msa0822180:CDS 35.0%
! AAACAGAAGAAATGGGTTTC+TGG - chr5_3:60526740-60526759 None:intergenic 35.0%
AACCCATTTCTTCTGTTTCA+TGG + chr5_3:60526742-60526761 Msa0822180:CDS 35.0%
CTCCATGAAACAGAAGAAAT+GGG - chr5_3:60526747-60526766 None:intergenic 35.0%
ACTCCATGAAACAGAAGAAA+TGG - chr5_3:60526748-60526767 None:intergenic 35.0%
ATAAATTTGGAGACACTTGC+CGG - chr5_3:60526835-60526854 None:intergenic 35.0%
! GAAAGTATATGTTTCCCACT+TGG - chr5_3:60526897-60526916 None:intergenic 35.0%
AGTGGGAAACATATACTTTC+TGG + chr5_3:60526897-60526916 Msa0822180:CDS 35.0%
!! TGATAAGAGCATTTGCATGT+GGG + chr5_3:60526926-60526945 Msa0822180:CDS 35.0%
ATTTGCATGTGGGAATTAGA+TGG + chr5_3:60526936-60526955 Msa0822180:CDS 35.0%
TTTGCATGTGGGAATTAGAT+GGG + chr5_3:60526937-60526956 Msa0822180:CDS 35.0%
ATTATAAGGTCTTGCTTTGG+TGG + chr5_3:60527253-60527272 Msa0822180:CDS 35.0%
GAATGAACACAATCCTTTGA+AGG + chr5_3:60527343-60527362 Msa0822180:intron 35.0%
GCTGTGAATCTTCTTTCATT+TGG + chr5_3:60527537-60527556 Msa0822180:intron 35.0%
TAGTCTCCATTGCTTAAATG+TGG + chr5_3:60527606-60527625 Msa0822180:intron 35.0%
CATTGTCCACATTTAAGCAA+TGG - chr5_3:60527615-60527634 None:intergenic 35.0%
CATATGTAGACCTACAAAGA+AGG - chr5_3:60527662-60527681 None:intergenic 35.0%
CTTCTTTGTAGGTCTACATA+TGG + chr5_3:60527660-60527679 Msa0822180:intron 35.0%
!!! CCTGGTAGATTCATCGATTT+TGG - chr5_3:60520315-60520334 None:intergenic 40.0%
CCAAAATCGATGAATCTACC+AGG + chr5_3:60520312-60520331 Msa0822180:CDS 40.0%
GCGTCGAATAATTCGAACTT+TGG + chr5_3:60520334-60520353 Msa0822180:CDS 40.0%
!! ATTTTAGGTAGTGTCGTGTC+CGG + chr5_3:60520782-60520801 Msa0822180:intron 40.0%
!! CCGTCGTTTTGCACATTTAT+TGG + chr5_3:60521223-60521242 Msa0822180:CDS 40.0%
TGAACAGCACAGTTCTTCAA+TGG + chr5_3:60521285-60521304 Msa0822180:intron 40.0%
! AATGAACCTGCCTTTTGTGT+AGG + chr5_3:60521365-60521384 Msa0822180:intron 40.0%
GGTTCGAAAAGCCAATAAGA+AGG + chr5_3:60521411-60521430 Msa0822180:CDS 40.0%
GAAAAGCCAATAAGAAGGGT+GGG + chr5_3:60521416-60521435 Msa0822180:CDS 40.0%
TCTTCCGAGAATGTGAAATG+AGG - chr5_3:60521466-60521485 None:intergenic 40.0%
CATTCTCGGAAGAGTCAAAA+CGG + chr5_3:60521473-60521492 Msa0822180:CDS 40.0%
ATTCTCGGAAGAGTCAAAAC+GGG + chr5_3:60521474-60521493 Msa0822180:CDS 40.0%
TGATGGAAACTTGAAGGATC+TGG + chr5_3:60521531-60521550 Msa0822180:CDS 40.0%
GTATAGCTAACGCAAGACAT+AGG + chr5_3:60521572-60521591 Msa0822180:CDS 40.0%
TGGAAGCTGTAACTTCTAGA+AGG + chr5_3:60521650-60521669 Msa0822180:CDS 40.0%
! GGAAGCTGTAACTTCTAGAA+GGG + chr5_3:60521651-60521670 Msa0822180:CDS 40.0%
! GACTGTATCTGACTTGAAAG+AGG + chr5_3:60521675-60521694 Msa0822180:CDS 40.0%
! TTTGAAGTTGAATGGAGAGG+GGG - chr5_3:60521710-60521729 None:intergenic 40.0%
!! CTTTGAAGTTGAATGGAGAG+GGG - chr5_3:60521711-60521730 None:intergenic 40.0%
!! GTCTTTGAAGTTGAATGGAG+AGG - chr5_3:60521713-60521732 None:intergenic 40.0%
GCATCCTTGTAAGATGCAAT+CGG - chr5_3:60521888-60521907 None:intergenic 40.0%
!! CCTGCTTTGAAACAAATGCA+AGG - chr5_3:60522142-60522161 None:intergenic 40.0%
CCTTGCATTTGTTTCAAAGC+AGG + chr5_3:60522139-60522158 Msa0822180:intron 40.0%
AAGCAGGTAGTTCTCATATC+TGG + chr5_3:60522155-60522174 Msa0822180:intron 40.0%
!! ACAATGATGGGAGTACTTGT+GGG - chr5_3:60522341-60522360 None:intergenic 40.0%
!! TACAATGATGGGAGTACTTG+TGG - chr5_3:60522342-60522361 None:intergenic 40.0%
TGGATTATATGTGGGGTAAG+GGG + chr5_3:60522462-60522481 Msa0822180:CDS 40.0%
! GAAAGAATCTCTAGAGAGAG+AGG + chr5_3:60522630-60522649 Msa0822180:CDS 40.0%
CAGATACGCTTAGATAGCAA+AGG + chr5_3:60523452-60523471 Msa0822180:intron 40.0%
ATACGCTTAGATAGCAAAGG+TGG + chr5_3:60523455-60523474 Msa0822180:CDS 40.0%
! TGGAGTTCTATTAAGGGTGT+TGG + chr5_3:60523508-60523527 Msa0822180:CDS 40.0%
TCAGAAATTTCATCCTTCGC+GGG - chr5_3:60523566-60523585 None:intergenic 40.0%
GTCAGAAATTTCATCCTTCG+CGG - chr5_3:60523567-60523586 None:intergenic 40.0%
CCGATATTCAGACTTCATGT+TGG + chr5_3:60523920-60523939 Msa0822180:CDS 40.0%
CAAGCATAAAATTGGGCTGT+AGG + chr5_3:60524040-60524059 Msa0822180:intron 40.0%
TTGTATCCATGTAGGTAGCT+TGG - chr5_3:60524293-60524312 None:intergenic 40.0%
GAGGGGGGATTAAATATAAC+AGG - chr5_3:60524323-60524342 None:intergenic 40.0%
TTCGTCTTAAGGAGTTTGTC+TGG + chr5_3:60524374-60524393 Msa0822180:intron 40.0%
TTTGGAGGATGTACTTTCTG+CGG + chr5_3:60524813-60524832 Msa0822180:CDS 40.0%
! TCAGAATTGGTTTCTTCCGA+AGG + chr5_3:60524967-60524986 Msa0822180:CDS 40.0%
CAAACACCATTAACGGTGTA+AGG - chr5_3:60525032-60525051 None:intergenic 40.0%
TTATTTCAGCAGCTTCTGGT+TGG - chr5_3:60525164-60525183 None:intergenic 40.0%
! CAACATCAACTATTTCGGGT+TGG - chr5_3:60525257-60525276 None:intergenic 40.0%
AACAAGTAGTTAATCGGGGT+TGG - chr5_3:60525637-60525656 None:intergenic 40.0%
AACCCCGATTAACTACTTGT+TGG + chr5_3:60525636-60525655 Msa0822180:intron 40.0%
CACCAACAAGTAGTTAATCG+GGG - chr5_3:60525641-60525660 None:intergenic 40.0%
! TGATGTTTTTCTTTCGCCCT+TGG + chr5_3:60525924-60525943 Msa0822180:intron 40.0%
CATACTCATGTAAATGGGCA+TGG - chr5_3:60526056-60526075 None:intergenic 40.0%
AAAAATCATCCCCAAAAGCC+AGG + chr5_3:60526150-60526169 Msa0822180:intron 40.0%
AAAATCATCCCCAAAAGCCA+GGG + chr5_3:60526151-60526170 Msa0822180:intron 40.0%
AGATCTGTCACAGTATTAGC+AGG - chr5_3:60526309-60526328 None:intergenic 40.0%
! AGAAACACATGATGATGAGG+AGG + chr5_3:60526330-60526349 Msa0822180:CDS 40.0%
ATGGCTTAACTCTGCAACAT+TGG + chr5_3:60526636-60526655 Msa0822180:intron 40.0%
TGGCTTAACTCTGCAACATT+GGG + chr5_3:60526637-60526656 Msa0822180:intron 40.0%
!! GTGATAAGAGCATTTGCATG+TGG + chr5_3:60526925-60526944 Msa0822180:CDS 40.0%
GGAATTAGATGGGAAAGAAG+TGG + chr5_3:60526947-60526966 Msa0822180:CDS 40.0%
AAAGAAGTGGAGTCTTGGAA+AGG + chr5_3:60526960-60526979 Msa0822180:CDS 40.0%
GATTTGGATATAACGGCTGA+CGG + chr5_3:60527005-60527024 Msa0822180:intron 40.0%
ATTTGGATATAACGGCTGAC+GGG + chr5_3:60527006-60527025 Msa0822180:intron 40.0%
TTGTACTTCCCAATGAGCTT+AGG - chr5_3:60527211-60527230 None:intergenic 40.0%
! AAGCTCATTGGGAAGTACAA+AGG + chr5_3:60527211-60527230 Msa0822180:CDS 40.0%
! TTGGGAAGTACAAAGGTCAT+AGG + chr5_3:60527218-60527237 Msa0822180:CDS 40.0%
TTCTAGGTGTGATGTTCAGT+AGG + chr5_3:60527464-60527483 Msa0822180:intron 40.0%
! ATCAGAGATGTTAGGTACTG+CGG - chr5_3:60527581-60527600 None:intergenic 40.0%
ATGACCGTACAATTCGGATA+TGG + chr5_3:60527789-60527808 Msa0822180:CDS 40.0%
TGACCGTACAATTCGGATAT+GGG + chr5_3:60527790-60527809 Msa0822180:CDS 40.0%
AATGGCATCCATTACTGCAA+TGG + chr5_3:60527854-60527873 Msa0822180:CDS 40.0%
AAGTTCCTCCATTGCAGTAA+TGG - chr5_3:60527865-60527884 None:intergenic 40.0%
AGTTCGAATTATTCGACGCC+TGG - chr5_3:60520333-60520352 None:intergenic 45.0%
! GCAGAGTACAAGTTTGAAGC+TGG + chr5_3:60521185-60521204 Msa0822180:intron 45.0%
TGCAAAACGACGGTCATCAT+TGG - chr5_3:60521216-60521235 None:intergenic 45.0%
CGAAAAGCCAATAAGAAGGG+TGG + chr5_3:60521415-60521434 Msa0822180:CDS 45.0%
ATCACTCCCACCCTTCTTAT+TGG - chr5_3:60521425-60521444 None:intergenic 45.0%
GAAGAGTCAAAACGGGCAAT+GGG + chr5_3:60521481-60521500 Msa0822180:CDS 45.0%
! TTCAAGTTTCCATCACCAGG+TGG - chr5_3:60521526-60521545 None:intergenic 45.0%
!! ACCTGGTGATGGAAACTTGA+AGG + chr5_3:60521525-60521544 Msa0822180:CDS 45.0%
! TCCTTCAAGTTTCCATCACC+AGG - chr5_3:60521529-60521548 None:intergenic 45.0%
GGAAACTTGAAGGATCTGGT+TGG + chr5_3:60521535-60521554 Msa0822180:CDS 45.0%
GATCTGGTTGGAGAAAAGAG+TGG + chr5_3:60521547-60521566 Msa0822180:CDS 45.0%
TTGAAGTTGAATGGAGAGGG+GGG - chr5_3:60521709-60521728 None:intergenic 45.0%
! GCTACCGATTGCATCTTACA+AGG + chr5_3:60521881-60521900 Msa0822180:CDS 45.0%
ATCAGCAGTTGAATCTCACC+AGG + chr5_3:60521914-60521933 Msa0822180:CDS 45.0%
TCTGTAACCAAGCTACCATG+TGG - chr5_3:60521983-60522002 None:intergenic 45.0%
GTTCTCATATCTGGTGAGAC+TGG + chr5_3:60522164-60522183 Msa0822180:CDS 45.0%
GGATTATATGTGGGGTAAGG+GGG + chr5_3:60522463-60522482 Msa0822180:CDS 45.0%
AGATACTTTGCACTCAGCCT+CGG + chr5_3:60522495-60522514 Msa0822180:CDS 45.0%
GTATCTCTGCAATGTCAGGT+GGG + chr5_3:60522519-60522538 Msa0822180:intron 45.0%
! AATCTCTAGAGAGAGAGGTG+AGG + chr5_3:60522635-60522654 Msa0822180:CDS 45.0%
TGAATTGAGTCGTTGGCAGT+GGG - chr5_3:60522949-60522968 None:intergenic 45.0%
GCAAGTTCCATTCCTAGCAT+TGG + chr5_3:60523063-60523082 Msa0822180:intron 45.0%
GAAGTGACCAATGCTAGGAA+TGG - chr5_3:60523073-60523092 None:intergenic 45.0%
! TGGTTTCTAAGGGTTCTCGT+CGG + chr5_3:60523528-60523547 Msa0822180:CDS 45.0%
TACCAACCAAGCTACCTACA+TGG + chr5_3:60524284-60524303 Msa0822180:intron 45.0%
ATCCATGTAGGTAGCTTGGT+TGG - chr5_3:60524289-60524308 None:intergenic 45.0%
TAACTGACCAGACGTAGATG+AGG - chr5_3:60524461-60524480 None:intergenic 45.0%
AGCCTGGAACTTGGATAACT+GGG - chr5_3:60524676-60524695 None:intergenic 45.0%
AAGCCTGGAACTTGGATAAC+TGG - chr5_3:60524677-60524696 None:intergenic 45.0%
GATAAGTGAAGCCTGGAACT+TGG - chr5_3:60524685-60524704 None:intergenic 45.0%
AGTTCCAGGCTTCACTTATC+CGG + chr5_3:60524685-60524704 Msa0822180:CDS 45.0%
!! TGGCTTGGTCTAATGATGAG+TGG + chr5_3:60524935-60524954 Msa0822180:CDS 45.0%
! GGCTTGGTCTAATGATGAGT+GGG + chr5_3:60524936-60524955 Msa0822180:CDS 45.0%
!! AACTGGCCTTACACCGTTAA+TGG + chr5_3:60525023-60525042 Msa0822180:CDS 45.0%
ACACCGTTAATGGTGTTTGC+CGG + chr5_3:60525033-60525052 Msa0822180:CDS 45.0%
CTTCCGGCAAACACCATTAA+CGG - chr5_3:60525039-60525058 None:intergenic 45.0%
TTAATGGTGTTTGCCGGAAG+AGG + chr5_3:60525039-60525058 Msa0822180:CDS 45.0%
TTTGCCGGAAGAGGTAGAAT+TGG + chr5_3:60525048-60525067 Msa0822180:CDS 45.0%
TTGCCGGAAGAGGTAGAATT+GGG + chr5_3:60525049-60525068 Msa0822180:CDS 45.0%
TTCCCCAATTCTACCTCTTC+CGG - chr5_3:60525055-60525074 None:intergenic 45.0%
TGCGCTAGAGATTGCTGAAA+GGG + chr5_3:60525134-60525153 Msa0822180:CDS 45.0%
GCATTCAATGGTTCCAACCT+TGG + chr5_3:60525434-60525453 Msa0822180:CDS 45.0%
TCCAACCTTGGAGCAAAAGA+AGG + chr5_3:60525446-60525465 Msa0822180:CDS 45.0%
! ACCTTCTTTTGCTCCAAGGT+TGG - chr5_3:60525450-60525469 None:intergenic 45.0%
!! TTTTCTCCTCCCTGGCTTTT+GGG - chr5_3:60526163-60526182 None:intergenic 45.0%
!! ATTTTCTCCTCCCTGGCTTT+TGG - chr5_3:60526164-60526183 None:intergenic 45.0%
! TTTCTCGATTTTCTCCTCCC+TGG - chr5_3:60526171-60526190 None:intergenic 45.0%
GGGAGGAGAAAATCGAGAAA+AGG + chr5_3:60526171-60526190 Msa0822180:intron 45.0%
! CACATGATGATGAGGAGGTA+TGG + chr5_3:60526335-60526354 Msa0822180:CDS 45.0%
TCAAACTGCAATCATCTGGG+AGG + chr5_3:60526408-60526427 Msa0822180:CDS 45.0%
GGCATTTGGCTGTGATTTGA+AGG - chr5_3:60526553-60526572 None:intergenic 45.0%
!! CATTGATGAGTGAGGGCATT+TGG - chr5_3:60526567-60526586 None:intergenic 45.0%
GTGGAGTGGAGGAATCTATT+AGG + chr5_3:60526793-60526812 Msa0822180:CDS 45.0%
TGGAGGAATCTATTAGGCGT+TGG + chr5_3:60526799-60526818 Msa0822180:CDS 45.0%
GGAGGAATCTATTAGGCGTT+GGG + chr5_3:60526800-60526819 Msa0822180:CDS 45.0%
TCCTGTACATGGTTTCCAAG+TGG + chr5_3:60526879-60526898 Msa0822180:CDS 45.0%
CCTGTACATGGTTTCCAAGT+GGG + chr5_3:60526880-60526899 Msa0822180:CDS 45.0%
ATGGGAAAGAAGTGGAGTCT+TGG + chr5_3:60526955-60526974 Msa0822180:CDS 45.0%
AAGGCGATCCTAAGCTCATT+GGG + chr5_3:60527200-60527219 Msa0822180:CDS 45.0%
GGCGCTCGAGGTTTATTATA+AGG + chr5_3:60527239-60527258 Msa0822180:CDS 45.0%
TTTCGTTGCAAGTGGAAGTG+AGG + chr5_3:60527288-60527307 Msa0822180:CDS 45.0%
AAGTGGAAGTGAGGATTCAC+AGG + chr5_3:60527297-60527316 Msa0822180:CDS 45.0%
GAAGTGAGGATTCACAGGTA+TGG + chr5_3:60527302-60527321 Msa0822180:intron 45.0%
! AGATGTTAGGTACTGCGGTA+TGG - chr5_3:60527576-60527595 None:intergenic 45.0%
TTAACAGCTCCTGAATGACC+AGG - chr5_3:60527719-60527738 None:intergenic 45.0%
GAGCTGTTAATTGTGTGAGC+TGG + chr5_3:60527729-60527748 Msa0822180:CDS 45.0%
CCAGTGATGACCGTACAATT+CGG + chr5_3:60527783-60527802 Msa0822180:CDS 45.0%
GACCGTACAATTCGGATATG+GGG + chr5_3:60527791-60527810 Msa0822180:CDS 45.0%
!!! TTTTTGTTTTTTTATTAATT+GGG + chr5_3:60520477-60520496 Msa0822180:intron 5.0%
AAACACAGCAGCAGCAGCTA+TGG + chr5_3:60520150-60520169 Msa0822180:five_prime_UTR 50.0%
GTCGACCACGTCGAACAAAA+AGG + chr5_3:60520250-60520269 Msa0822180:CDS 50.0%
!!! GTTGGCCTTTTTGTTCGACG+TGG - chr5_3:60520258-60520277 None:intergenic 50.0%
ACAAACACAGACACCGACAC+CGG - chr5_3:60520804-60520823 None:intergenic 50.0%
! ACCTGCCTTTTGTGTAGGAC+TGG + chr5_3:60521370-60521389 Msa0822180:intron 50.0%
! CCTGCCTTTTGTGTAGGACT+GGG + chr5_3:60521371-60521390 Msa0822180:intron 50.0%
CCTTCCCAGTCCTACACAAA+AGG - chr5_3:60521378-60521397 None:intergenic 50.0%
! CCTTTTGTGTAGGACTGGGA+AGG + chr5_3:60521375-60521394 Msa0822180:intron 50.0%
TGGGAAGGAGAGGAGATTGT+CGG + chr5_3:60521390-60521409 Msa0822180:CDS 50.0%
GGAAGAGTCAAAACGGGCAA+TGG + chr5_3:60521480-60521499 Msa0822180:CDS 50.0%
! GCTCATTTTCCACCTGGTGA+TGG + chr5_3:60521514-60521533 Msa0822180:CDS 50.0%
TGAAGTTGAATGGAGAGGGG+GGG - chr5_3:60521708-60521727 None:intergenic 50.0%
! ATATCTGGTGAGACTGGCTG+TGG + chr5_3:60522170-60522189 Msa0822180:CDS 50.0%
TGGCTGTGGAAAGACTACTC+AGG + chr5_3:60522184-60522203 Msa0822180:CDS 50.0%
TTGTGGGAGAAACCCAAAGC+TGG - chr5_3:60522325-60522344 None:intergenic 50.0%
CGTATCTCTGCAATGTCAGG+TGG + chr5_3:60522518-60522537 Msa0822180:intron 50.0%
GAGGCTGCTGGAGAAAATGT+TGG + chr5_3:60522654-60522673 Msa0822180:CDS 50.0%
GAATTGAGTCGTTGGCAGTG+GGG - chr5_3:60522948-60522967 None:intergenic 50.0%
GTGAATTGAGTCGTTGGCAG+TGG - chr5_3:60522950-60522969 None:intergenic 50.0%
GAAGCGAAGTGACCAATGCT+AGG - chr5_3:60523078-60523097 None:intergenic 50.0%
GTCAATGAAGAATCCCGCGA+AGG + chr5_3:60523550-60523569 Msa0822180:CDS 50.0%
TGCCCAGTTATCCAAGTTCC+AGG + chr5_3:60524671-60524690 Msa0822180:CDS 50.0%
! AGTACCGGATAAGTGAAGCC+TGG - chr5_3:60524692-60524711 None:intergenic 50.0%
GTGGGACCTACTGTCAGAAT+TGG + chr5_3:60524954-60524973 Msa0822180:CDS 50.0%
!! GAAGAGTTCTGGGGTTCCTT+CGG - chr5_3:60524986-60525005 None:intergenic 50.0%
TGCCGGAAGAGGTAGAATTG+GGG + chr5_3:60525050-60525069 Msa0822180:CDS 50.0%
TAGCGCAGTTGTTCCGTCTT+TGG - chr5_3:60525121-60525140 None:intergenic 50.0%
CTGCGCTAGAGATTGCTGAA+AGG + chr5_3:60525133-60525152 Msa0822180:CDS 50.0%
!! GTTTTTAAGCGTCCACCTCC+TGG + chr5_3:60525468-60525487 Msa0822180:CDS 50.0%
!! GTAGAGTATTGTCGGGCCAA+GGG - chr5_3:60525943-60525962 None:intergenic 50.0%
!! AGTAGAGTATTGTCGGGCCA+AGG - chr5_3:60525944-60525963 None:intergenic 50.0%
GGCATGGGTTTGCATCGAAA+AGG - chr5_3:60526040-60526059 None:intergenic 50.0%
!! TAGATAGGAGCACTGACTCG+TGG - chr5_3:60526105-60526124 None:intergenic 50.0%
!! TTTCTCCTCCCTGGCTTTTG+GGG - chr5_3:60526162-60526181 None:intergenic 50.0%
GTGAGGAGCTCTTCGTCATT+AGG - chr5_3:60526771-60526790 None:intergenic 50.0%
ATTCCTCCACTCCACATGTG+AGG - chr5_3:60526788-60526807 None:intergenic 50.0%
!! AGGCGTTGGGATGTTTCTAC+CGG + chr5_3:60526813-60526832 Msa0822180:CDS 50.0%
CTGGCTTAGTCTCCTGTACA+TGG + chr5_3:60526868-60526887 Msa0822180:CDS 50.0%
CCCACTTGGAAACCATGTAC+AGG - chr5_3:60526883-60526902 None:intergenic 50.0%
GAAGGCGATCCTAAGCTCAT+TGG + chr5_3:60527199-60527218 Msa0822180:CDS 50.0%
GAGCAAGCTTTCGTTGCAAG+TGG + chr5_3:60527280-60527299 Msa0822180:CDS 50.0%
! TACATATGGCACCGAAGCTC+AGG + chr5_3:60527674-60527693 Msa0822180:CDS 50.0%
! GCTAACATGTGGGGATTAGC+TGG - chr5_3:60527758-60527777 None:intergenic 50.0%
ACTGGCAGAGGCTAACATGT+GGG - chr5_3:60527768-60527787 None:intergenic 50.0%
CCGAATTGTACGGTCATCAC+TGG - chr5_3:60527786-60527805 None:intergenic 50.0%
GGCCCCATATCCGAATTGTA+CGG - chr5_3:60527796-60527815 None:intergenic 50.0%
TACCAACATGCGCACAGCAA+TGG + chr5_3:60527836-60527855 Msa0822180:CDS 50.0%
GGCATCCATTACTGCAATGG+AGG + chr5_3:60527857-60527876 Msa0822180:CDS 50.0%
CCCAGTCCTACACAAAAGGC+AGG - chr5_3:60521374-60521393 None:intergenic 55.0%
TGTGTAGGACTGGGAAGGAG+AGG + chr5_3:60521380-60521399 Msa0822180:intron 55.0%
GACATTGCAGAGATACGCCG+AGG - chr5_3:60522515-60522534 None:intergenic 55.0%
CGGCGTATCTCTGCAATGTC+AGG + chr5_3:60522515-60522534 Msa0822180:CDS 55.0%
ACTCTGCTCTTCTGTCGAGC+TGG - chr5_3:60525208-60525227 None:intergenic 55.0%
! ACAATTTTGCGGCAGCCAGG+AGG - chr5_3:60525486-60525505 None:intergenic 55.0%
! AGGACAATTTTGCGGCAGCC+AGG - chr5_3:60525489-60525508 None:intergenic 55.0%
ATCATCCCCAAAAGCCAGGG+AGG + chr5_3:60526154-60526173 Msa0822180:intron 55.0%
GACGAAGAGCTCCTCACATG+TGG + chr5_3:60526774-60526793 Msa0822180:CDS 55.0%
AGAGCTCCTCACATGTGGAG+TGG + chr5_3:60526779-60526798 Msa0822180:CDS 55.0%
ACAAAGGTCATAGGCGCTCG+AGG + chr5_3:60527227-60527246 Msa0822180:CDS 55.0%
!! CTATCGGCTCTCCTGAGCTT+CGG - chr5_3:60527688-60527707 None:intergenic 55.0%
AAGCTCAGGAGAGCCGATAG+AGG + chr5_3:60527688-60527707 Msa0822180:CDS 55.0%
TGACCAGGCAGTGCCTCTAT+CGG - chr5_3:60527704-60527723 None:intergenic 55.0%
CTGGCAGAGGCTAACATGTG+GGG - chr5_3:60527767-60527786 None:intergenic 55.0%
CACTGGCAGAGGCTAACATG+TGG - chr5_3:60527769-60527788 None:intergenic 55.0%
TGTACGGTCATCACTGGCAG+AGG - chr5_3:60527780-60527799 None:intergenic 55.0%
TGCCATTGCTGTGCGCATGT+TGG - chr5_3:60527841-60527860 None:intergenic 55.0%
CACAGCAGCAGCAGCTATGG+CGG + chr5_3:60520153-60520172 Msa0822180:five_prime_UTR 60.0%
GGTAGTGTCGTGTCCGGTGT+CGG + chr5_3:60520788-60520807 Msa0822180:intron 60.0%
AGAGAGAGAGGTGAGGCTGC+TGG + chr5_3:60522642-60522661 Msa0822180:CDS 60.0%
! ATTTTGCGGCAGCCAGGAGG+TGG - chr5_3:60525483-60525502 None:intergenic 60.0%
GCTCCTCACATGTGGAGTGG+AGG + chr5_3:60526782-60526801 Msa0822180:CDS 60.0%
!! GAGGCACTGCCTGGTCATTC+AGG + chr5_3:60527707-60527726 Msa0822180:CDS 60.0%
!! GAGCCGATAGAGGCACTGCC+TGG + chr5_3:60527698-60527717 Msa0822180:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 60520098 60527886 60520098 ID=Msa0822180;Name=Msa0822180
chr5_3 mRNA 60520098 60527886 60520098 ID=Msa0822180-mRNA-1;Parent=Msa0822180;Name=Msa0822180-mRNA-1;_AED=0.36;_eAED=0.36;_QI=150|0.66|0.5|1|1|1|16|0|896
chr5_3 exon 60520098 60520383 60520098 ID=Msa0822180-mRNA-1:exon:18568;Parent=Msa0822180-mRNA-1
chr5_3 exon 60521189 60521279 60521189 ID=Msa0822180-mRNA-1:exon:18569;Parent=Msa0822180-mRNA-1
chr5_3 exon 60521387 60521696 60521387 ID=Msa0822180-mRNA-1:exon:18570;Parent=Msa0822180-mRNA-1
chr5_3 exon 60521861 60521935 60521861 ID=Msa0822180-mRNA-1:exon:18571;Parent=Msa0822180-mRNA-1
chr5_3 exon 60522161 60522205 60522161 ID=Msa0822180-mRNA-1:exon:18572;Parent=Msa0822180-mRNA-1
chr5_3 exon 60522446 60522536 60522446 ID=Msa0822180-mRNA-1:exon:18573;Parent=Msa0822180-mRNA-1
chr5_3 exon 60522625 60522683 60522625 ID=Msa0822180-mRNA-1:exon:18574;Parent=Msa0822180-mRNA-1
chr5_3 exon 60523455 60523604 60523455 ID=Msa0822180-mRNA-1:exon:18575;Parent=Msa0822180-mRNA-1
chr5_3 exon 60523900 60523952 60523900 ID=Msa0822180-mRNA-1:exon:18576;Parent=Msa0822180-mRNA-1
chr5_3 exon 60524439 60524472 60524439 ID=Msa0822180-mRNA-1:exon:18577;Parent=Msa0822180-mRNA-1
chr5_3 exon 60524617 60524706 60524617 ID=Msa0822180-mRNA-1:exon:18578;Parent=Msa0822180-mRNA-1
chr5_3 exon 60524799 60525503 60524799 ID=Msa0822180-mRNA-1:exon:18579;Parent=Msa0822180-mRNA-1
chr5_3 exon 60526325 60526429 60526325 ID=Msa0822180-mRNA-1:exon:18580;Parent=Msa0822180-mRNA-1
chr5_3 exon 60526666 60527019 60526666 ID=Msa0822180-mRNA-1:exon:18581;Parent=Msa0822180-mRNA-1
chr5_3 exon 60527142 60527318 60527142 ID=Msa0822180-mRNA-1:exon:18582;Parent=Msa0822180-mRNA-1
chr5_3 exon 60527671 60527886 60527671 ID=Msa0822180-mRNA-1:exon:18583;Parent=Msa0822180-mRNA-1
chr5_3 five_prime_UTR 60520098 60520247 60520098 ID=Msa0822180-mRNA-1:five_prime_utr;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60520248 60520383 60520248 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60521189 60521279 60521189 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60521387 60521696 60521387 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60521861 60521935 60521861 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60522161 60522205 60522161 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60522446 60522536 60522446 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60522625 60522683 60522625 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60523455 60523604 60523455 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60523900 60523952 60523900 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60524439 60524472 60524439 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60524617 60524706 60524617 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60524799 60525503 60524799 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60526325 60526429 60526325 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60526666 60527019 60526666 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60527142 60527318 60527142 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
chr5_3 CDS 60527671 60527886 60527671 ID=Msa0822180-mRNA-1:cds;Parent=Msa0822180-mRNA-1
Gene Sequence

>Msa0822180

ATGTCGACCACGTCGAACAAAAAGGCCAACAAGCTAGCAAGATTTAAGAAGTACGCTCAACCTACCAAAATCGATGAATCTACCAGGCGTCGAATAATTCGAACTTTGGAATTTTTTCAATCTTCTGATGAAGAAGAGTACAAGTTTGAAGCTGGTTTGTCCAATGATGACCGTCGTTTTGCACATTTATTGGCCCAAAAAATGGGGTTTAAGTCTAAAAGTTATGGGACTGGGAAGGAGAGGAGATTGTCGGTTCGAAAAGCCAATAAGAAGGGTGGGAGTGATAATCAGTTTGCGAATCTTCCTCATTTCACATTCTCGGAAGAGTCAAAACGGGCAATGGGCGATTTATTTGCTCATTTTCCACCTGGTGATGGAAACTTGAAGGATCTGGTTGGAGAAAAGAGTGGCAGTATAGCTAACGCAAGACATAGGCATTCTGATATTTTTAGCAGACCCGTAATGACAAAAGATGAAATTACTCGGAAATTGGAAGCTGTAACTTCTAGAAGGGAGACTGTATCTGACTTGAAAGAGATTACTGTGTTGAGATCTAAGCTACCGATTGCATCTTACAAGGATGCAATTACATCAGCAGTTGAATCTCACCAGGTAGTTCTCATATCTGGTGAGACTGGCTGTGGAAAGACTACTCAGGTCCCACAATATATTTTGGATTATATGTGGGGTAAGGGGGAGACATGTAAGATACTTTGCACTCAGCCTCGGCGTATCTCTGCAATGTCAGTTTCTGAAAGAATCTCTAGAGAGAGAGGTGAGGCTGCTGGAGAAAATGTTGGATACAAGATACGCTTAGATAGCAAAGGTGGACAGCAATCATCTATTGTTCTATGTACTACTGGAGTTCTATTAAGGGTGTTGGTTTCTAAGGGTTCTCGTCGGTCAATGAAGAATCCCGCGAAGGATGAAATTTCTGACATCACTCACATCATTATGGATGAAATTCATGAAAGGGACCGATATTCAGACTTCATGTTGGCAATAATGAGAGACATGCTCCCTTTATATCCTCATCTACGTCTGGTATTAATGAGTGCTACCATTGATACTGCGAGATTTTCTCAATATTTTGGGGGATGCCCAGTTATCCAAGTTCCAGGCTTCACTTATCCGGTCAAAACATACTATTTGGAGGATGTACTTTCTGCGGTAAAATCAAGCAATGATGATGGTTCCACATTTAGTATTCCAACAAACAATCACATGATAAGTGAAGAACATAAGCTTTCCTTTGATGAAGCTATTAATTTGGCTTGGTCTAATGATGAGTGGGACCTACTGTCAGAATTGGTTTCTTCCGAAGGAACCCCAGAACTCTTCAATTATCAGCATTCTTTAACTGGCCTTACACCGTTAATGGTGTTTGCCGGAAGAGGTAGAATTGGGGAAATGTGCATGCTCTTATCTTTTGGCGCAGATTGCAATTTAAGGTCCAAAGACGGAACAACTGCGCTAGAGATTGCTGAAAGGGAAAACCAACCAGAAGCTGCTGAAATAATAAAGAAACACATGGATGGTTCCAGCTCGACAGAAGAGCAGAGTATACTTAACAAATATCTTGAAAGAGTCCAACCCGAAATAGTTGATGTTGTTTTGATAGAGCAGCTGATAAGAAAAATATGTACTGATTCAAAAGATGGAGGCATCCTTGTTTTTTTTTCAGGATGGGATGATATAAATAGAGCGCGCGAGAAGTTGCTAGCATCCTCTTTTTTCAATAATCCATCAAAATTTGTGATCATATCTCTGCATTCAATGGTTCCAACCTTGGAGCAAAAGAAGGTTTTTAAGCGTCCACCTCCTGGCTGCCGCAAAATTATCTTAGAAACACATGATGATGAGGAGGTATGGTTTGTACAATTTTCACATAATGGGAAGTATTTAGCTTCAGCGTCAAATGATCAAACTGCAATCATCTGGGAGATTTTAATTTTTGGTCTTCTTTTTAAAGGTTGGCGTAAATGGGTGCGTGTAAAGCATAGATTATCTGGTCACCAGAAACCCATTTCTTCTGTTTCATGGAGTCCTAATGACGAAGAGCTCCTCACATGTGGAGTGGAGGAATCTATTAGGCGTTGGGATGTTTCTACCGGCAAGTGTCTCCAAATTTATGAAAAAGCTGGTTCTGGCTTAGTCTCCTGTACATGGTTTCCAAGTGGGAAACATATACTTTCTGGCTTAAGTGATAAGAGCATTTGCATGTGGGAATTAGATGGGAAAGAAGTGGAGTCTTGGAAAGGACAAAAATCGCTTAAGATTTCTGATTTGGATATAACGGATAATAAATTTTTGTTGGTTAATCTTTTGAACCAAGAAATTAATCTTTGGAATATTGAAGGCGATCCTAAGCTCATTGGGAAGTACAAAGGTCATAGGCGCTCGAGGTTTATTATAAGGTCTTGCTTTGGTGGACTTGAGCAAGCTTTCGTTGCAAGTGGAAGTGAGGATTCACAGGTCTACATATGGCACCGAAGCTCAGGAGAGCCGATAGAGGCACTGCCTGGTCATTCAGGAGCTGTTAATTGTGTGAGCTGGAATCCAGCTAATCCCCACATGTTAGCCTCTGCCAGTGATGACCGTACAATTCGGATATGGGGCCTTAATAGTCTGAATAAAAAGTACCAACATGCGCACAGCAATGGCATCCATTACTGCAATGGAGGAACTTAG
Protein sequence

>Msa0822180

MSTTSNKKANKLARFKKYAQPTKIDESTRRRIIRTLEFFQSSDEEEYKFEAGLSNDDRRFAHLLAQKMGFKSKSYGTGKERRLSVRKANKKGGSDNQFANLPHFTFSEESKRAMGDLFAHFPPGDGNLKDLVGEKSGSIANARHRHSDIFSRPVMTKDEITRKLEAVTSRRETVSDLKEITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVPQYILDYMWGKGETCKILCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTTGVLLRVLVSKGSRRSMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLRLVLMSATIDTARFSQYFGGCPVIQVPGFTYPVKTYYLEDVLSAVKSSNDDGSTFSIPTNNHMISEEHKLSFDEAINLAWSNDEWDLLSELVSSEGTPELFNYQHSLTGLTPLMVFAGRGRIGEMCMLLSFGADCNLRSKDGTTALEIAERENQPEAAEIIKKHMDGSSSTEEQSILNKYLERVQPEIVDVVLIEQLIRKICTDSKDGGILVFFSGWDDINRAREKLLASSFFNNPSKFVIISLHSMVPTLEQKKVFKRPPPGCRKIILETHDDEEVWFVQFSHNGKYLASASNDQTAIIWEILIFGLLFKGWRKWVRVKHRLSGHQKPISSVSWSPNDEELLTCGVEESIRRWDVSTGKCLQIYEKAGSGLVSCTWFPSGKHILSGLSDKSICMWELDGKEVESWKGQKSLKISDLDITDNKFLLVNLLNQEINLWNIEGDPKLIGKYKGHRRSRFIIRSCFGGLEQAFVASGSEDSQVYIWHRSSGEPIEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLNSLNKKYQHAHSNGIHYCNGGT*