Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212730 | XP_013457987.1 | 96.729 | 642 | 16 | 3 | 1 | 639 | 1 | 640 | 0.0 | 1254 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212730 | sp|Q9C911|JJJ1_ARATH | 49.927 | 683 | 245 | 16 | 1 | 639 | 1 | 630 | 3.33e-179 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1212730 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029630 | Msa1212730 | 0.827424 | 1.576437e-54 | -8.615850e-47 |
| Msa0038000 | Msa1212730 | 0.847160 | 1.378624e-59 | -8.615850e-47 |
| Msa0038440 | Msa1212730 | 0.827978 | 1.160247e-54 | -8.615850e-47 |
| Msa0063520 | Msa1212730 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
| Msa0072420 | Msa1212730 | 0.818008 | 2.451836e-52 | -8.615850e-47 |
| Msa0079920 | Msa1212730 | 0.800954 | 1.130762e-48 | -8.615850e-47 |
| Msa0091610 | Msa1212730 | 0.816457 | 5.476602e-52 | -8.615850e-47 |
| Msa0093010 | Msa1212730 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa0097950 | Msa1212730 | 0.806486 | 8.037476e-50 | -8.615850e-47 |
| Msa0103790 | Msa1212730 | 0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa0115370 | Msa1212730 | 0.815721 | 7.994706e-52 | -8.615850e-47 |
| Msa0614510 | Msa1212730 | 0.811073 | 8.402729e-51 | -8.615850e-47 |
| Msa0622790 | Msa1212730 | 0.816394 | 5.657259e-52 | -8.615850e-47 |
| Msa0628420 | Msa1212730 | 0.813832 | 2.096213e-51 | -8.615850e-47 |
| Msa0634890 | Msa1212730 | 0.817777 | 2.765852e-52 | -8.615850e-47 |
| Msa0640940 | Msa1212730 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0679360 | Msa1212730 | 0.823066 | 1.691379e-53 | -8.615850e-47 |
| Msa0690310 | Msa1212730 | 0.852292 | 5.079590e-61 | -8.615850e-47 |
| Msa0690540 | Msa1212730 | 0.810411 | 1.167979e-50 | -8.615850e-47 |
| Msa0693210 | Msa1212730 | 0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0705090 | Msa1212730 | 0.820608 | 6.269622e-53 | -8.615850e-47 |
| Msa0741440 | Msa1212730 | 0.818699 | 1.710699e-52 | -8.615850e-47 |
| Msa0743530 | Msa1212730 | 0.814428 | 1.548614e-51 | -8.615850e-47 |
| Msa0748430 | Msa1212730 | 0.802602 | 5.191077e-49 | -8.615850e-47 |
| Msa0752700 | Msa1212730 | 0.841783 | 3.853275e-58 | -8.615850e-47 |
| Msa0786750 | Msa1212730 | 0.805296 | 1.429889e-49 | -8.615850e-47 |
| Msa0794970 | Msa1212730 | 0.846107 | 2.673272e-59 | -8.615850e-47 |
| Msa0822170 | Msa1212730 | 0.826662 | 2.398563e-54 | -8.615850e-47 |
| Msa0822180 | Msa1212730 | 0.833062 | 6.618499e-56 | -8.615850e-47 |
| Msa0822500 | Msa1212730 | 0.800983 | 1.115588e-48 | -8.615850e-47 |
| Msa0828680 | Msa1212730 | 0.804221 | 2.396893e-49 | -8.615850e-47 |
| Msa0829220 | Msa1212730 | 0.849827 | 2.517682e-60 | -8.615850e-47 |
| Msa0831100 | Msa1212730 | 0.845952 | 2.945609e-59 | -8.615850e-47 |
| Msa0123510 | Msa1212730 | 0.819419 | 1.173000e-52 | -8.615850e-47 |
| Msa0125450 | Msa1212730 | 0.825142 | 5.507427e-54 | -8.615850e-47 |
| Msa0125540 | Msa1212730 | 0.818100 | 2.337257e-52 | -8.615850e-47 |
| Msa0132830 | Msa1212730 | 0.818331 | 2.072764e-52 | -8.615850e-47 |
| Msa0136120 | Msa1212730 | 0.832607 | 8.584372e-56 | -8.615850e-47 |
| Msa0147980 | Msa1212730 | 0.809631 | 1.720310e-50 | -8.615850e-47 |
| Msa0150260 | Msa1212730 | 0.814241 | 1.702697e-51 | -8.615850e-47 |
| Msa0173800 | Msa1212730 | 0.805228 | 1.477564e-49 | -8.615850e-47 |
| Msa0190590 | Msa1212730 | 0.814791 | 1.287205e-51 | -8.615850e-47 |
| Msa0204960 | Msa1212730 | 0.802666 | 5.035092e-49 | -8.615850e-47 |
| Msa0206690 | Msa1212730 | 0.824287 | 8.759125e-54 | -8.615850e-47 |
| Msa0207670 | Msa1212730 | 0.828239 | 1.004051e-54 | -8.615850e-47 |
| Msa0209350 | Msa1212730 | 0.817968 | 2.503796e-52 | -8.615850e-47 |
| Msa0230820 | Msa1212730 | 0.817177 | 3.774669e-52 | -8.615850e-47 |
| Msa0365700 | Msa1212730 | 0.813687 | 2.255972e-51 | -8.615850e-47 |
| Msa0376820 | Msa1212730 | 0.819923 | 9.000465e-53 | -8.615850e-47 |
| Msa0384670 | Msa1212730 | 0.803318 | 3.691058e-49 | -8.615850e-47 |
| Msa0385500 | Msa1212730 | 0.831284 | 1.820999e-55 | -8.615850e-47 |
| Msa0413530 | Msa1212730 | 0.841091 | 5.864651e-58 | -8.615850e-47 |
| Msa0419720 | Msa1212730 | 0.815024 | 1.142719e-51 | -8.615850e-47 |
| Msa0426580 | Msa1212730 | 0.823372 | 1.434797e-53 | -8.615850e-47 |
| Msa0432500 | Msa1212730 | 0.831126 | 1.992100e-55 | -8.615850e-47 |
| Msa0434570 | Msa1212730 | 0.812847 | 3.449814e-51 | -8.615850e-47 |
| Msa0434770 | Msa1212730 | 0.810653 | 1.035613e-50 | -8.615850e-47 |
| Msa0443430 | Msa1212730 | 0.833793 | 4.347710e-56 | -8.615850e-47 |
| Msa0462600 | Msa1212730 | 0.806316 | 8.729038e-50 | -8.615850e-47 |
| Msa0472130 | Msa1212730 | 0.816036 | 6.800838e-52 | -8.615850e-47 |
| Msa0482040 | Msa1212730 | 0.802727 | 4.889589e-49 | -8.615850e-47 |
| Msa0980540 | Msa1212730 | 0.817530 | 3.144111e-52 | -8.615850e-47 |
| Msa1036300 | Msa1212730 | 0.807364 | 5.241761e-50 | -8.615850e-47 |
| Msa1037520 | Msa1212730 | 0.826453 | 2.690345e-54 | -8.615850e-47 |
| Msa1039900 | Msa1212730 | 0.804333 | 2.271465e-49 | -8.615850e-47 |
| Msa0244980 | Msa1212730 | 0.809549 | 1.791401e-50 | -8.615850e-47 |
| Msa0245580 | Msa1212730 | 0.800964 | 1.125548e-48 | -8.615850e-47 |
| Msa0249580 | Msa1212730 | 0.808529 | 2.961925e-50 | -8.615850e-47 |
| Msa0257490 | Msa1212730 | 0.815967 | 7.047366e-52 | -8.615850e-47 |
| Msa0275360 | Msa1212730 | 0.801571 | 8.457432e-49 | -8.615850e-47 |
| Msa0296790 | Msa1212730 | 0.819883 | 9.193499e-53 | -8.615850e-47 |
| Msa0322240 | Msa1212730 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0361850 | Msa1212730 | 0.813420 | 2.582533e-51 | -8.615850e-47 |
| Msa0363640 | Msa1212730 | 0.826812 | 2.208865e-54 | -8.615850e-47 |
| Msa1127590 | Msa1212730 | 0.802605 | 5.181771e-49 | -8.615850e-47 |
| Msa1128330 | Msa1212730 | 0.805309 | 1.420366e-49 | -8.615850e-47 |
| Msa1131490 | Msa1212730 | 0.809515 | 1.821777e-50 | -8.615850e-47 |
| Msa1158640 | Msa1212730 | -0.829767 | 4.281989e-55 | -8.615850e-47 |
| Msa1178580 | Msa1212730 | 0.823435 | 1.386985e-53 | -8.615850e-47 |
| Msa1205590 | Msa1212730 | 0.814605 | 1.414666e-51 | -8.615850e-47 |
| Msa1206650 | Msa1212730 | 0.809148 | 2.183262e-50 | -8.615850e-47 |
| Msa1211830 | Msa1212730 | 0.800279 | 1.552681e-48 | -8.615850e-47 |
| Msa1212730 | Msa1212950 | 0.852421 | 4.669273e-61 | -8.615850e-47 |
| Msa1212730 | Msa1230040 | 0.838748 | 2.391690e-57 | -8.615850e-47 |
| Msa1212730 | Msa1233850 | 0.833459 | 5.267569e-56 | -8.615850e-47 |
| Msa1212730 | Msa1235460 | 0.825161 | 5.451097e-54 | -8.615850e-47 |
| Msa1212730 | Msa1272600 | 0.832708 | 8.104153e-56 | -8.615850e-47 |
| Msa1212730 | Msa1276150 | 0.822322 | 2.520238e-53 | -8.615850e-47 |
| Msa1212730 | Msa1278900 | 0.812095 | 5.036300e-51 | -8.615850e-47 |
| Msa1212730 | Msa1310450 | 0.841329 | 5.077589e-58 | -8.615850e-47 |
| Msa1212730 | Msa1331620 | 0.965744 | 5.283754e-125 | -8.615850e-47 |
| Msa1212730 | Msa1362420 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
| Msa1212730 | Msa1370590 | 0.805095 | 1.574805e-49 | -8.615850e-47 |
| Msa1212730 | Msa1373850 | 0.808313 | 3.292872e-50 | -8.615850e-47 |
| Msa1212730 | Msa1384100 | 0.801988 | 6.942839e-49 | -8.615850e-47 |
| Msa1212730 | Msa1396870 | 0.828446 | 8.952211e-55 | -8.615850e-47 |
| Msa1212730 | Msa1411950 | 0.811998 | 5.287507e-51 | -8.615850e-47 |
| Msa1212730 | Msa1416260 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
| Msa1212730 | Msa1435770 | 0.844846 | 5.869196e-59 | -8.615850e-47 |
| Msa1212730 | Msa1437860 | 0.809283 | 2.042776e-50 | -8.615850e-47 |
| Msa1212730 | Msa1444120 | 0.803161 | 3.978687e-49 | -8.615850e-47 |
| Msa1212730 | Msa1450310 | 0.807792 | 4.251802e-50 | -8.615850e-47 |
| Msa0484740 | Msa1212730 | 0.819092 | 1.392764e-52 | -8.615850e-47 |
| Msa0491000 | Msa1212730 | 0.807950 | 3.933933e-50 | -8.615850e-47 |
| Msa0511770 | Msa1212730 | 0.811860 | 5.668659e-51 | -8.615850e-47 |
| Msa0517590 | Msa1212730 | 0.808967 | 2.387499e-50 | -8.615850e-47 |
| Msa0531250 | Msa1212730 | 0.810691 | 1.016316e-50 | -8.615850e-47 |
| Msa0542560 | Msa1212730 | 0.816555 | 5.206097e-52 | -8.615850e-47 |
| Msa0544840 | Msa1212730 | 0.835279 | 1.840172e-56 | -8.615850e-47 |
| Msa0549450 | Msa1212730 | 0.848769 | 4.961044e-60 | -8.615850e-47 |
| Msa0595170 | Msa1212730 | 0.815744 | 7.901829e-52 | -8.615850e-47 |
| Msa0600450 | Msa1212730 | 0.836593 | 8.544696e-57 | -8.615850e-47 |
| Msa0872250 | Msa1212730 | 0.806153 | 9.444667e-50 | -8.615850e-47 |
| Msa0906780 | Msa1212730 | 0.807580 | 4.715404e-50 | -8.615850e-47 |
| Msa0958000 | Msa1212730 | 0.808741 | 2.667854e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212730 | MtrunA17_Chr4g0061421 | 96.729 | 642 | 16 | 3 | 1 | 639 | 1 | 640 | 0.0 | 1254 |
| Msa1212730 | MtrunA17_Chr3g0113421 | 63.158 | 152 | 18 | 3 | 483 | 632 | 9 | 124 | 9.52e-31 | 117 |
| Msa1212730 | MtrunA17_Chr7g0269901 | 31.224 | 237 | 111 | 10 | 9 | 230 | 97 | 296 | 1.16e-16 | 84.0 |
| Msa1212730 | MtrunA17_Chr3g0142871 | 31.224 | 237 | 111 | 10 | 9 | 230 | 97 | 296 | 1.62e-16 | 83.6 |
| Msa1212730 | MtrunA17_Chr7g0271891 | 45.588 | 68 | 37 | 0 | 8 | 75 | 16 | 83 | 1.52e-15 | 74.7 |
| Msa1212730 | MtrunA17_Chr8g0344721 | 53.731 | 67 | 29 | 1 | 10 | 74 | 12 | 78 | 3.99e-14 | 72.4 |
| Msa1212730 | MtrunA17_Chr4g0044331 | 50.000 | 62 | 31 | 0 | 14 | 75 | 18 | 79 | 4.69e-13 | 67.4 |
| Msa1212730 | MtrunA17_Chr1g0209551 | 34.899 | 149 | 79 | 5 | 2 | 149 | 10 | 141 | 4.83e-12 | 68.6 |
| Msa1212730 | MtrunA17_Chr6g0460381 | 50.000 | 64 | 31 | 1 | 9 | 71 | 4 | 67 | 2.99e-11 | 63.2 |
| Msa1212730 | MtrunA17_Chr2g0333221 | 38.462 | 104 | 56 | 2 | 9 | 109 | 71 | 169 | 7.38e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1212730 | AT1G74250.1 | 49.927 | 683 | 245 | 16 | 1 | 639 | 1 | 630 | 3.39e-180 | 525 |
| Msa1212730 | AT3G11450.1 | 28.099 | 242 | 126 | 7 | 2 | 230 | 93 | 299 | 6.09e-15 | 79.0 |
| Msa1212730 | AT3G14200.1 | 53.846 | 65 | 29 | 1 | 10 | 74 | 14 | 77 | 2.83e-13 | 70.1 |
| Msa1212730 | AT1G56300.2 | 38.356 | 73 | 45 | 0 | 2 | 74 | 7 | 79 | 1.16e-12 | 65.5 |
| Msa1212730 | AT1G56300.1 | 38.356 | 73 | 45 | 0 | 2 | 74 | 7 | 79 | 1.40e-12 | 66.2 |
| Msa1212730 | AT1G71000.1 | 41.892 | 74 | 43 | 0 | 1 | 74 | 1 | 74 | 8.76e-12 | 64.3 |
| Msa1212730 | AT1G71000.2 | 41.892 | 74 | 43 | 0 | 1 | 74 | 1 | 74 | 8.91e-12 | 64.3 |
| Msa1212730 | AT5G25530.2 | 35.345 | 116 | 59 | 5 | 9 | 112 | 5 | 116 | 1.34e-11 | 67.0 |
| Msa1212730 | AT5G06110.1 | 28.185 | 259 | 120 | 10 | 9 | 251 | 101 | 309 | 2.90e-11 | 67.0 |
| Msa1212730 | AT5G06110.2 | 28.185 | 259 | 120 | 10 | 9 | 251 | 101 | 309 | 2.90e-11 | 67.0 |
| Msa1212730 | AT1G59980.2 | 44.595 | 74 | 37 | 1 | 6 | 79 | 21 | 90 | 8.67e-11 | 64.7 |
Find 186 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTCCTCTTATGGGGAATT+TGG | 0.141158 | 8_1:-72746710 | Msa1212730:CDS |
| TGTTGCTTCGATAAACAATT+AGG | 0.166260 | 8_1:+72747170 | None:intergenic |
| CGAAGCCACCGCTCAGTTTC+AGG | 0.199966 | 8_1:-72747004 | Msa1212730:CDS |
| ACGGAGTTAGACTTTGAATT+TGG | 0.225449 | 8_1:+72746895 | None:intergenic |
| ATATGCGACTACTTCAATTT+TGG | 0.237735 | 8_1:-72744674 | Msa1212730:three_prime_UTR |
| TATGAAGGTGAAGAAGAATT+TGG | 0.247762 | 8_1:-72746455 | Msa1212730:CDS |
| TTGCTAAGAAATTAGGTTTA+GGG | 0.251194 | 8_1:-72746750 | Msa1212730:CDS |
| TGTTAGACAGGCTCCTCTTA+TGG | 0.265835 | 8_1:-72746719 | Msa1212730:CDS |
| GGCGTTGGAGAGCGAGTTTC+CGG | 0.265860 | 8_1:+72747064 | None:intergenic |
| TTTGCTAAGAAATTAGGTTT+AGG | 0.269838 | 8_1:-72746751 | Msa1212730:CDS |
| TGGCGTTGGGGTTGATGATT+TGG | 0.280098 | 8_1:-72746071 | Msa1212730:CDS |
| TGATGTGTTTGATAAAATTC+AGG | 0.297358 | 8_1:-72746788 | Msa1212730:CDS |
| AATTGAAGTAGTCGCATATC+TGG | 0.303758 | 8_1:+72744678 | None:intergenic |
| GAGAAGAATGTAATCAATAT+TGG | 0.312751 | 8_1:-72745548 | Msa1212730:CDS |
| GTTCTTGAAACAATGGTATC+TGG | 0.319682 | 8_1:-72745869 | Msa1212730:CDS |
| TTCCGGTAAGGGTTTCTATA+AGG | 0.322734 | 8_1:-72746818 | Msa1212730:CDS |
| GTTGCTTCGATAAACAATTA+GGG | 0.333342 | 8_1:+72747171 | None:intergenic |
| GATGTTGATGATGATGAAAT+TGG | 0.336996 | 8_1:-72745800 | Msa1212730:CDS |
| CCTGATTTGACGAGCTTGTC+AGG | 0.337742 | 8_1:+72747039 | None:intergenic |
| TGTTTAGATATCTAATGTTA+TGG | 0.351979 | 8_1:-72744466 | Msa1212730:three_prime_UTR |
| GTTAGACAGGCTCCTCTTAT+GGG | 0.353059 | 8_1:-72746718 | Msa1212730:CDS |
| ATGTCTATGAAAATAGTTTA+CGG | 0.353143 | 8_1:-72744349 | Msa1212730:three_prime_UTR |
| TTCTTGGATTAGAGAAATCT+TGG | 0.357865 | 8_1:-72744956 | Msa1212730:intron |
| AACCTCCGCGACTTCCTATT+CGG | 0.359713 | 8_1:+72746586 | None:intergenic |
| GTTCATAAGGGTATGGATAC+AGG | 0.366618 | 8_1:-72744571 | Msa1212730:three_prime_UTR |
| AAGAACTCCGATCAGCTTAC+CGG | 0.367180 | 8_1:-72747083 | Msa1212730:CDS |
| GGGCTTGTGTGTTGAAGCAC+TGG | 0.368221 | 8_1:+72745736 | None:intergenic |
| GATGGAGGAAGAGAATAATA+AGG | 0.374112 | 8_1:-72746563 | Msa1212730:CDS |
| TAGGAAGTCGCGGAGGTTGA+TGG | 0.374440 | 8_1:-72746581 | Msa1212730:CDS |
| CTTCTGTCGTCGTCAACCTC+AGG | 0.376304 | 8_1:-72747233 | Msa1212730:five_prime_UTR |
| ATGTTGATGATGATGAAATT+GGG | 0.378497 | 8_1:-72745799 | Msa1212730:CDS |
| CCTGACAAGCTCGTCAAATC+AGG | 0.380161 | 8_1:-72747039 | Msa1212730:CDS |
| TAAGCTGATCGGAGTTCTTC+CGG | 0.384438 | 8_1:+72747087 | None:intergenic |
| TCATCAACCTTAGCCCAATC+AGG | 0.385687 | 8_1:+72746346 | None:intergenic |
| CTGAAACTGAGCGGTGGCTT+CGG | 0.388334 | 8_1:+72747005 | None:intergenic |
| GAAGGAGAGGAAGAGGAAGT+TGG | 0.396116 | 8_1:-72746407 | Msa1212730:CDS |
| AGGAGGAGAAGGAGAGGAAG+AGG | 0.399336 | 8_1:-72746414 | Msa1212730:CDS |
| TCGTACCAAGCTCGTTCCTT+TGG | 0.399711 | 8_1:+72746949 | None:intergenic |
| TATTTATGCCACAGTTCATA+AGG | 0.401824 | 8_1:-72744584 | Msa1212730:three_prime_UTR |
| TTCTGGAAACAATAGTGAAA+TGG | 0.405064 | 8_1:-72744395 | Msa1212730:three_prime_UTR |
| GAAGAAGATTTCAAATCAAC+CGG | 0.408421 | 8_1:-72745429 | Msa1212730:CDS |
| TGGCTTATGAGGAGCCTGAT+TGG | 0.409460 | 8_1:-72746360 | Msa1212730:CDS |
| GAAACTAATGTGCCTACTAA+TGG | 0.414627 | 8_1:-72745578 | Msa1212730:CDS |
| AAAGTGAGGAGGATGGCGTT+GGG | 0.416761 | 8_1:-72746084 | Msa1212730:CDS |
| GGAGAAAGTTGCCGAGTTCA+AGG | 0.421000 | 8_1:-72746188 | Msa1212730:CDS |
| GGTGAGGAGGAAGGCGAAGA+GGG | 0.422169 | 8_1:-72746542 | Msa1212730:CDS |
| TAAGAGAGTGATTGATATGA+AGG | 0.428180 | 8_1:-72746470 | Msa1212730:CDS |
| TTCTCACTCTCAATTTGAGT+TGG | 0.428513 | 8_1:+72745698 | None:intergenic |
| ATCCGAAAACCCCGAAAATA+CGG | 0.430044 | 8_1:+72746840 | None:intergenic |
| TAGTCCTTATGCGCAGGTTA+CGG | 0.433863 | 8_1:-72746686 | Msa1212730:CDS |
| AGGGATTGATTCTGTTAGAC+AGG | 0.434136 | 8_1:-72746731 | Msa1212730:CDS |
| GAAGTTGGAGATGGAGAGGA+AGG | 0.434700 | 8_1:-72746392 | Msa1212730:CDS |
| TTCGAGGAAAATGAGGATAA+TGG | 0.435391 | 8_1:-72745485 | Msa1212730:CDS |
| GCAGAAGACGAGAGTGCAAA+TGG | 0.435707 | 8_1:-72746019 | Msa1212730:CDS |
| GGAGAGGGCTATGGCTTATG+AGG | 0.439385 | 8_1:-72746371 | Msa1212730:CDS |
| AAAGCCGTAACCTGCGCATA+AGG | 0.439715 | 8_1:+72746682 | None:intergenic |
| TAAATTGTAGCTCAGCCTTC+CGG | 0.440662 | 8_1:-72744619 | Msa1212730:three_prime_UTR |
| AGAAGTTGAGGATTTGTATG+AGG | 0.441764 | 8_1:-72746320 | Msa1212730:CDS |
| AACCTTATAGAAACCCTTAC+CGG | 0.442360 | 8_1:+72746816 | None:intergenic |
| CGATGCCACTACGAAGTTCT+CGG | 0.443193 | 8_1:-72747129 | Msa1212730:CDS |
| AAAATAGAATGAACTCCATC+TGG | 0.446254 | 8_1:+72744416 | None:intergenic |
| GGCTTATGAGGAGCCTGATT+GGG | 0.449241 | 8_1:-72746359 | Msa1212730:CDS |
| GGGTGAGATCTATTGAAATT+CGG | 0.451094 | 8_1:+72744542 | None:intergenic |
| GAAGAAGAAAGAGGAGGAGA+AGG | 0.462080 | 8_1:-72746425 | Msa1212730:CDS |
| TTCTCATATTTGCCATTAGT+AGG | 0.462771 | 8_1:+72745566 | None:intergenic |
| TGGTATCTGGGCACAAGGGC+CGG | 0.463969 | 8_1:-72745856 | Msa1212730:CDS |
| CGAGCTTGTCAGGGTGGCGT+TGG | 0.466381 | 8_1:+72747049 | None:intergenic |
| AGTTTAAGAGTGAGAAGCAA+TGG | 0.469035 | 8_1:-72746240 | Msa1212730:CDS |
| TGAAAGTGAAGGGGTTGGAG+AGG | 0.470038 | 8_1:-72746116 | Msa1212730:CDS |
| GAAGGTGAAAGTGAAGGGGT+TGG | 0.476024 | 8_1:-72746121 | Msa1212730:CDS |
| CTATCCAAATTCCCCATAAG+AGG | 0.477965 | 8_1:+72746706 | None:intergenic |
| GAATGATGGGGTTGGTGCTA+TGG | 0.478029 | 8_1:-72745672 | Msa1212730:CDS |
| GTCTAGTTCCCAATATTTCG+AGG | 0.480169 | 8_1:-72745501 | Msa1212730:CDS |
| CCAATATTTCGAGGAAAATG+AGG | 0.482316 | 8_1:-72745492 | Msa1212730:CDS |
| GTTCTTGAAGCAATGCTGGC+TGG | 0.482368 | 8_1:-72745776 | Msa1212730:CDS |
| TGGGGTTCTTGAAGCAATGC+TGG | 0.483544 | 8_1:-72745780 | Msa1212730:CDS |
| GAGGAAGAGGAAGTTGGAGA+TGG | 0.484765 | 8_1:-72746401 | Msa1212730:CDS |
| GAAAGTGAGGAGGATGGCGT+TGG | 0.484850 | 8_1:-72746085 | Msa1212730:CDS |
| ATTTATGCCACAGTTCATAA+GGG | 0.489773 | 8_1:-72744583 | Msa1212730:three_prime_UTR |
| GAATAATAAGGTGAGGAGGA+AGG | 0.491971 | 8_1:-72746551 | Msa1212730:CDS |
| CATAAACATCTGAGCGACTC+TGG | 0.492233 | 8_1:-72744782 | Msa1212730:CDS |
| TGCCACAGTTCATAAGGGTA+TGG | 0.496764 | 8_1:-72744578 | Msa1212730:three_prime_UTR |
| AGTTGGAGTTTCAGAAGCCT+CGG | 0.497718 | 8_1:+72745715 | None:intergenic |
| TCATTGTCACCATCATCATT+CGG | 0.500186 | 8_1:+72745989 | None:intergenic |
| GGCTTGTGTGTTGAAGCACT+GGG | 0.501875 | 8_1:+72745737 | None:intergenic |
| CAGAAGACGAGAGTGCAAAT+GGG | 0.506677 | 8_1:-72746018 | Msa1212730:CDS |
| AGAAAGAGGAGGAGAAGGAG+AGG | 0.506886 | 8_1:-72746420 | Msa1212730:CDS |
| AGAGGAAGTTGGAGATGGAG+AGG | 0.510470 | 8_1:-72746396 | Msa1212730:CDS |
| AGAGGAGAGATTAGAAAGTG+AGG | 0.511041 | 8_1:-72746098 | Msa1212730:CDS |
| GCAATGGAATCGAGATCTAT+CGG | 0.514559 | 8_1:-72744323 | Msa1212730:three_prime_UTR |
| AAAATCTGTAATAAGAGTAT+TGG | 0.516505 | 8_1:-72744257 | Msa1212730:three_prime_UTR |
| ACGAGGAAGGTGAAAGTGAA+GGG | 0.517150 | 8_1:-72746126 | Msa1212730:CDS |
| GACGAGGAAGGTGAAAGTGA+AGG | 0.520922 | 8_1:-72746127 | Msa1212730:CDS |
| GCAGCAATGAAAAGTCGATA+AGG | 0.521221 | 8_1:-72744755 | Msa1212730:exon |
| GAGAGTGAGAATGAGAATGA+TGG | 0.521962 | 8_1:-72745686 | Msa1212730:CDS |
| GTTTGAGAAGAAAGATGAGA+AGG | 0.522115 | 8_1:-72746290 | Msa1212730:CDS |
| TGGATCGGAGAGTACCTCAT+AGG | 0.522444 | 8_1:+72746969 | None:intergenic |
| TGAGCAGAGTAAGAAGCATA+AGG | 0.522481 | 8_1:-72746209 | Msa1212730:CDS |
| TGGAGATGGAGAGGAAGGAG+AGG | 0.522737 | 8_1:-72746387 | Msa1212730:CDS |
| AGATTAGAAAGTGAGGAGGA+TGG | 0.523209 | 8_1:-72746091 | Msa1212730:CDS |
| GGTTGATGAAGAAGAAGTTG+AGG | 0.524241 | 8_1:-72746332 | Msa1212730:CDS |
| CGAAGCAACAATGGCATCGA+CGG | 0.524518 | 8_1:-72747157 | Msa1212730:exon |
| TTCTGTCGTCGTCAACCTCA+GGG | 0.524893 | 8_1:-72747232 | Msa1212730:five_prime_UTR |
| CATTCTCATCAAAATCAAAC+CGG | 0.526287 | 8_1:+72745837 | None:intergenic |
| ATAAATAACATGCTTTCTGC+CGG | 0.530799 | 8_1:+72744600 | None:intergenic |
| CGAGTTTCCGGTAAGCTGAT+CGG | 0.532549 | 8_1:+72747076 | None:intergenic |
| TCGATAAGGAAAATATACTA+AGG | 0.533085 | 8_1:-72744741 | Msa1212730:exon |
| TGAGGAGCCTGATTGGGCTA+AGG | 0.533690 | 8_1:-72746353 | Msa1212730:CDS |
| AGGTGAGGAGGAAGGCGAAG+AGG | 0.534213 | 8_1:-72746543 | Msa1212730:CDS |
| TTCTTGAAACAATGGTATCT+GGG | 0.534518 | 8_1:-72745868 | Msa1212730:CDS |
| GGTGAAGAAGAATTTGGAGA+TGG | 0.534575 | 8_1:-72746449 | Msa1212730:CDS |
| AGAGTGAGAATGAGAATGAT+GGG | 0.534818 | 8_1:-72745685 | Msa1212730:CDS |
| GGAGAGGAAGGAGAGGGCTA+TGG | 0.537823 | 8_1:-72746380 | Msa1212730:CDS |
| AGAGGAGTTAGAAGCTGAAG+TGG | 0.540411 | 8_1:-72746149 | Msa1212730:CDS |
| GTTAGACTTTGAATTTGGAT+CGG | 0.547048 | 8_1:+72746900 | None:intergenic |
| GGAGATGGAGAAGAAGAAAG+AGG | 0.547787 | 8_1:-72746434 | Msa1212730:CDS |
| TTGAATTTGGATCGGAGAAG+AGG | 0.548637 | 8_1:+72746908 | None:intergenic |
| AATGTAATCAATATTGGAGA+TGG | 0.550622 | 8_1:-72745542 | Msa1212730:CDS |
| TGTAATAAGAGTATTGGTGC+TGG | 0.551876 | 8_1:-72744251 | Msa1212730:three_prime_UTR |
| CAATGGAATCGAGATCTATC+GGG | 0.552754 | 8_1:-72744322 | Msa1212730:three_prime_UTR |
| GGAGATGGAGAGGAAGGAGA+GGG | 0.552905 | 8_1:-72746386 | Msa1212730:CDS |
| GATGAGTATGATGCGATGGC+AGG | 0.553346 | 8_1:-72746610 | Msa1212730:CDS |
| GAAGAGGATTTGAGAACGAT+GGG | 0.554440 | 8_1:+72746924 | None:intergenic |
| CCAAGCTCGTTCCTTTGGAT+CGG | 0.555573 | 8_1:+72746954 | None:intergenic |
| GTTGGAGTTTCAGAAGCCTC+GGG | 0.557564 | 8_1:+72745716 | None:intergenic |
| AGAAGAGGATTTGAGAACGA+TGG | 0.558151 | 8_1:+72746923 | None:intergenic |
| CCGATCCAAAGGAACGAGCT+TGG | 0.558363 | 8_1:-72746954 | Msa1212730:CDS |
| GGAGAGATTAGAAAGTGAGG+AGG | 0.558505 | 8_1:-72746095 | Msa1212730:CDS |
| AAATAGTTTACGGATGGCAA+TGG | 0.559656 | 8_1:-72744339 | Msa1212730:three_prime_UTR |
| GTTAGAAGCTGAAGTGGACG+AGG | 0.565424 | 8_1:-72746143 | Msa1212730:CDS |
| CGAAAACAGGTCAGGGACAA+CGG | 0.566006 | 8_1:+72746876 | None:intergenic |
| TTTGGATAGTCCTTATGCGC+AGG | 0.567782 | 8_1:-72746692 | Msa1212730:CDS |
| GAGCAAAGAAAGAGAAGGGT+GGG | 0.568242 | 8_1:-72745613 | Msa1212730:CDS |
| AACAATGGTATCTGGGCACA+AGG | 0.568483 | 8_1:-72745861 | Msa1212730:CDS |
| AAGAGAATAATAAGGTGAGG+AGG | 0.569009 | 8_1:-72746555 | Msa1212730:CDS |
| AATGGAATCTTAGCAAGCAC+AGG | 0.570316 | 8_1:-72744377 | Msa1212730:three_prime_UTR |
| TCTACCTCGCGAATGCTCAC+CGG | 0.571563 | 8_1:-72747106 | Msa1212730:CDS |
| CTGATTTGACGAGCTTGTCA+GGG | 0.572375 | 8_1:+72747040 | None:intergenic |
| GGATTCACTTGATGATGAAG+AGG | 0.574101 | 8_1:-72746167 | Msa1212730:CDS |
| GGAGCTACAACACGCCTATG+AGG | 0.575033 | 8_1:-72746983 | Msa1212730:CDS |
| CGGTGGCTTCGGATTGAGAG+AGG | 0.580013 | 8_1:+72747016 | None:intergenic |
| ACGTAGAGCAAAGAAAGAGA+AGG | 0.595059 | 8_1:-72745618 | Msa1212730:CDS |
| CTATGAAAATAGTTTACGGA+TGG | 0.596236 | 8_1:-72744345 | Msa1212730:three_prime_UTR |
| GGGGTTGAGCCGAATGATGA+TGG | 0.597019 | 8_1:-72745998 | Msa1212730:CDS |
| ATAACATGCTTTCTGCCGGA+AGG | 0.598055 | 8_1:+72744604 | None:intergenic |
| TGAGGTACTCTCCGATCCAA+AGG | 0.600261 | 8_1:-72746965 | Msa1212730:CDS |
| AGGAAGAGAATAATAAGGTG+AGG | 0.601773 | 8_1:-72746558 | Msa1212730:CDS |
| ATCAAGTGAATCCTTGAACT+CGG | 0.603284 | 8_1:+72746177 | None:intergenic |
| AAGTGAGGAGGATGGCGTTG+GGG | 0.606066 | 8_1:-72746083 | Msa1212730:CDS |
| ATTTCAAATATATCATCGAG+TGG | 0.606505 | 8_1:-72744711 | Msa1212730:three_prime_UTR |
| CGGTAAAGAGAATGAGCAGG+TGG | 0.606870 | 8_1:-72745462 | Msa1212730:CDS |
| TTCATAAGGGTATGGATACA+GGG | 0.609063 | 8_1:-72744570 | Msa1212730:three_prime_UTR |
| CGAGGAAGGTGAAAGTGAAG+GGG | 0.611247 | 8_1:-72746125 | Msa1212730:CDS |
| TTAGACAGGCTCCTCTTATG+GGG | 0.611836 | 8_1:-72746717 | Msa1212730:CDS |
| TAATGATACTGTGAGAAAGT+TGG | 0.612128 | 8_1:-72746515 | Msa1212730:CDS |
| TGGCGGTAAAGAGAATGAGC+AGG | 0.613961 | 8_1:-72745465 | Msa1212730:CDS |
| GAAGCTGAAGTGGACGAGGA+AGG | 0.614178 | 8_1:-72746139 | Msa1212730:CDS |
| ATTGTTTATCGAAGCAACAA+TGG | 0.617119 | 8_1:-72747166 | Msa1212730:exon |
| CGTAGAGCAAAGAAAGAGAA+GGG | 0.619612 | 8_1:-72745617 | Msa1212730:CDS |
| TGTTGATGATGATGAAATTG+GGG | 0.621284 | 8_1:-72745798 | Msa1212730:CDS |
| GGCAGATGAGTATGATGCGA+TGG | 0.625967 | 8_1:-72746614 | Msa1212730:CDS |
| AGTAGTCGCATATCTGGACC+TGG | 0.632829 | 8_1:+72744684 | None:intergenic |
| GAGAATGAGAATGATGGGGT+TGG | 0.635119 | 8_1:-72745680 | Msa1212730:CDS |
| GTGAGCAGGAGTTTGAGTCA+AGG | 0.636045 | 8_1:-72744916 | Msa1212730:intron |
| GAATGATGTTCTTGAAACAA+TGG | 0.639988 | 8_1:-72745876 | Msa1212730:CDS |
| ATTTGACGAGCTTGTCAGGG+TGG | 0.643119 | 8_1:+72747043 | None:intergenic |
| GATGGAGAAGAAGAAAGAGG+AGG | 0.648465 | 8_1:-72746431 | Msa1212730:CDS |
| AGAAGACGAGAGTGCAAATG+GGG | 0.651811 | 8_1:-72746017 | Msa1212730:CDS |
| TGTTATCTGACATACAGAGA+GGG | 0.654486 | 8_1:+72744522 | None:intergenic |
| TGCTGAGCATGCAGAAGATG+AGG | 0.655174 | 8_1:-72745954 | Msa1212730:CDS |
| AGAGCAAAGAAAGAGAAGGG+TGG | 0.655964 | 8_1:-72745614 | Msa1212730:CDS |
| ATCCATACCCTTATGAACTG+TGG | 0.656114 | 8_1:+72744576 | None:intergenic |
| TGCTTCAACACACAAGCCCG+AGG | 0.660773 | 8_1:-72745732 | Msa1212730:CDS |
| TAGCTCCTGAAACTGAGCGG+TGG | 0.662261 | 8_1:+72746999 | None:intergenic |
| CAGGTCCGAATAGGAAGTCG+CGG | 0.662770 | 8_1:-72746591 | Msa1212730:CDS |
| GAAGTCGCGGAGGTTGATGG+AGG | 0.669800 | 8_1:-72746578 | Msa1212730:CDS |
| AGATCAAAACTTTCAACCAG+AGG | 0.672866 | 8_1:-72745371 | Msa1212730:CDS |
| ACAATGGTATCTGGGCACAA+GGG | 0.680825 | 8_1:-72745860 | Msa1212730:CDS |
| TCTTCCGGTGAGCATTCGCG+AGG | 0.687306 | 8_1:+72747102 | None:intergenic |
| GGTAAAGAGAATGAGCAGGT+GGG | 0.690040 | 8_1:-72745461 | Msa1212730:CDS |
| GAGGAAAATGAGGATAATGG+CGG | 0.690575 | 8_1:-72745482 | Msa1212730:CDS |
| ATGTTATCTGACATACAGAG+AGG | 0.696739 | 8_1:+72744521 | None:intergenic |
| GAGTGAGAATGAGAATGATG+GGG | 0.711594 | 8_1:-72745684 | Msa1212730:CDS |
| GTCCGAATAGGAAGTCGCGG+AGG | 0.733839 | 8_1:-72746588 | Msa1212730:CDS |
| GTAGACCGAGAACTTCGTAG+TGG | 0.735555 | 8_1:+72747124 | None:intergenic |
| TTGTAGCTCCTGAAACTGAG+CGG | 0.736164 | 8_1:+72746996 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTGATGAAATTAAA+AGG | - | chr8_1:72746274-72746293 | Msa1212730:CDS | 10.0% |
| !!! | ATTAATTTTGCTAAGAAATT+AGG | - | chr8_1:72744686-72744705 | Msa1212730:three_prime_UTR | 15.0% |
| !! | TATTCATAAAAACATACATT+TGG | + | chr8_1:72746105-72746124 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTCTTTCTTTCT+TGG | - | chr8_1:72746471-72746490 | Msa1212730:CDS | 15.0% |
| !!! | ATTAATAGCAACTATTTTTT+GGG | + | chr8_1:72747160-72747179 | None:intergenic | 15.0% |
| !!! | TATTAATAGCAACTATTTTT+TGG | + | chr8_1:72747161-72747180 | None:intergenic | 15.0% |
| !!! | AAAAAATAGTTGCTATTAAT+AGG | - | chr8_1:72747160-72747179 | Msa1212730:exon | 15.0% |
| !!! | AAAAATAGTTGCTATTAATA+GGG | - | chr8_1:72747161-72747180 | Msa1212730:exon | 15.0% |
| !! | AAAAAATTGGAAGTAAAACA+AGG | + | chr8_1:72746237-72746256 | None:intergenic | 20.0% |
| !! | ACTTAGTAAAGCAAAAAAAT+TGG | + | chr8_1:72746250-72746269 | None:intergenic | 20.0% |
| !! | CAGAATAATAAACAAGAAAA+TGG | + | chr8_1:72746326-72746345 | None:intergenic | 20.0% |
| !!! | TTTTCTTGTTTATTATTCTG+TGG | - | chr8_1:72746326-72746345 | Msa1212730:CDS | 20.0% |
| !!! | CTTTGTTTTATTTTATTCTC+AGG | - | chr8_1:72746629-72746648 | Msa1212730:CDS | 20.0% |
| !! | CTGTAGTAAAAATTAAAGAA+TGG | + | chr8_1:72746796-72746815 | None:intergenic | 20.0% |
| !! | TGTTTAGATATCTAATGTTA+TGG | - | chr8_1:72746977-72746996 | Msa1212730:CDS | 20.0% |
| !! | ATGTCTATGAAAATAGTTTA+CGG | - | chr8_1:72747094-72747113 | Msa1212730:CDS | 20.0% |
| !!! | AAAATCTGTAATAAGAGTAT+TGG | - | chr8_1:72747186-72747205 | Msa1212730:five_prime_UTR | 20.0% |
| ! | TGATGTGTTTGATAAAATTC+AGG | - | chr8_1:72744655-72744674 | Msa1212730:three_prime_UTR | 25.0% |
| ! | TTTGCTAAGAAATTAGGTTT+AGG | - | chr8_1:72744692-72744711 | Msa1212730:three_prime_UTR | 25.0% |
| ! | TTGCTAAGAAATTAGGTTTA+GGG | - | chr8_1:72744693-72744712 | Msa1212730:three_prime_UTR | 25.0% |
| !! | TTACGGCTTTTTATAGTTAT+TGG | - | chr8_1:72744774-72744793 | Msa1212730:CDS | 25.0% |
| !!! | GCTTTTTATAGTTATTGGTT+GGG | - | chr8_1:72744779-72744798 | Msa1212730:CDS | 25.0% |
| !!! | TTTGATTTTGATGAGAATGA+TGG | - | chr8_1:72745610-72745629 | Msa1212730:CDS | 25.0% |
| !!! | ATGTTGATGATGATGAAATT+GGG | - | chr8_1:72745644-72745663 | Msa1212730:CDS | 25.0% |
| ! | GAGAAGAATGTAATCAATAT+TGG | - | chr8_1:72745895-72745914 | Msa1212730:CDS | 25.0% |
| ! | AATGTAATCAATATTGGAGA+TGG | - | chr8_1:72745901-72745920 | Msa1212730:CDS | 25.0% |
| ! | CAAAAACAGTATATTAGAAC+AGG | + | chr8_1:72746187-72746206 | None:intergenic | 25.0% |
| !! | CTGTTCTAATATACTGTTTT+TGG | - | chr8_1:72746185-72746204 | Msa1212730:CDS | 25.0% |
| !!! | TTTTTTTGCTTTACTAAGTG+TGG | - | chr8_1:72746251-72746270 | Msa1212730:CDS | 25.0% |
| !! | TTTTTAAATTCACACATGTG+AGG | - | chr8_1:72746351-72746370 | Msa1212730:CDS | 25.0% |
| ! | TCGATAAGGAAAATATACTA+AGG | - | chr8_1:72746702-72746721 | Msa1212730:CDS | 25.0% |
| ! | ATTTCAAATATATCATCGAG+TGG | - | chr8_1:72746732-72746751 | Msa1212730:CDS | 25.0% |
| !!! | TCTAAACACATGTTTTGTTT+GGG | + | chr8_1:72746965-72746984 | None:intergenic | 25.0% |
| !!! | ATCTAAACACATGTTTTGTT+TGG | + | chr8_1:72746966-72746985 | None:intergenic | 25.0% |
| GTTGCTTCGATAAACAATTA+GGG | + | chr8_1:72744275-72744294 | None:intergenic | 30.0% | |
| ! | TGTTGCTTCGATAAACAATT+AGG | + | chr8_1:72744276-72744295 | None:intergenic | 30.0% |
| ATTGTTTATCGAAGCAACAA+TGG | - | chr8_1:72744277-72744296 | Msa1212730:three_prime_UTR | 30.0% | |
| GTTAGACTTTGAATTTGGAT+CGG | + | chr8_1:72744546-72744565 | None:intergenic | 30.0% | |
| TATTCGAGAAAAACGAAAAC+AGG | + | chr8_1:72744583-72744602 | None:intergenic | 30.0% | |
| ! | TTTCTCGAATACCGTATTTT+CGG | - | chr8_1:72744592-72744611 | Msa1212730:three_prime_UTR | 30.0% |
| ! | GGCTTTTTATAGTTATTGGT+TGG | - | chr8_1:72744778-72744797 | Msa1212730:CDS | 30.0% |
| ! | GACTGTTATGGATTTTTGTT+GGG | - | chr8_1:72744808-72744827 | Msa1212730:intron | 30.0% |
| TAATGATACTGTGAGAAAGT+TGG | - | chr8_1:72744928-72744947 | Msa1212730:CDS | 30.0% | |
| TAAGAGAGTGATTGATATGA+AGG | - | chr8_1:72744973-72744992 | Msa1212730:intron | 30.0% | |
| TATGAAGGTGAAGAAGAATT+TGG | - | chr8_1:72744988-72745007 | Msa1212730:intron | 30.0% | |
| !!! | AGTTTTATTGTGTGTTGTGT+GGG | - | chr8_1:72745176-72745195 | Msa1212730:intron | 30.0% |
| GAATGATGTTCTTGAAACAA+TGG | - | chr8_1:72745567-72745586 | Msa1212730:CDS | 30.0% | |
| TTCTTGAAACAATGGTATCT+GGG | - | chr8_1:72745575-72745594 | Msa1212730:CDS | 30.0% | |
| CATTCTCATCAAAATCAAAC+CGG | + | chr8_1:72745609-72745628 | None:intergenic | 30.0% | |
| !! | GATGTTGATGATGATGAAAT+TGG | - | chr8_1:72745643-72745662 | Msa1212730:CDS | 30.0% |
| !! | TGTTGATGATGATGAAATTG+GGG | - | chr8_1:72745645-72745664 | Msa1212730:CDS | 30.0% |
| !!! | GTTTCTTTTTTGCAGGTTTT+TGG | + | chr8_1:72745807-72745826 | None:intergenic | 30.0% |
| TTCTCATATTTGCCATTAGT+AGG | + | chr8_1:72745880-72745899 | None:intergenic | 30.0% | |
| ! | CTCATTTTCCTCGAAATATT+GGG | + | chr8_1:72745953-72745972 | None:intergenic | 30.0% |
| GAAGAAGATTTCAAATCAAC+CGG | - | chr8_1:72746014-72746033 | Msa1212730:CDS | 30.0% | |
| !! | AATCAACCGGTTGATAAAAA+AGG | - | chr8_1:72746027-72746046 | Msa1212730:CDS | 30.0% |
| !!! | GAAGTTCCTTTTTTATCAAC+CGG | + | chr8_1:72746036-72746055 | None:intergenic | 30.0% |
| ! | TTCTTGGATTAGAGAAATCT+TGG | - | chr8_1:72746487-72746506 | Msa1212730:CDS | 30.0% |
| TTGAAATTTGATGAGCAAGA+GGG | + | chr8_1:72746563-72746582 | None:intergenic | 30.0% | |
| TCATCATTGTTTATGTTGTG+AGG | - | chr8_1:72746590-72746609 | Msa1212730:CDS | 30.0% | |
| ! | ATATGCGACTACTTCAATTT+TGG | - | chr8_1:72746769-72746788 | Msa1212730:CDS | 30.0% |
| ATAAATAACATGCTTTCTGC+CGG | + | chr8_1:72746846-72746865 | None:intergenic | 30.0% | |
| TATTTATGCCACAGTTCATA+AGG | - | chr8_1:72746859-72746878 | Msa1212730:CDS | 30.0% | |
| ATTTATGCCACAGTTCATAA+GGG | - | chr8_1:72746860-72746879 | Msa1212730:CDS | 30.0% | |
| AAAATAGAATGAACTCCATC+TGG | + | chr8_1:72747030-72747049 | None:intergenic | 30.0% | |
| ! | ATGGAGTTCATTCTATTTTC+TGG | - | chr8_1:72747031-72747050 | Msa1212730:CDS | 30.0% |
| ! | TTCTGGAAACAATAGTGAAA+TGG | - | chr8_1:72747048-72747067 | Msa1212730:CDS | 30.0% |
| CTATGAAAATAGTTTACGGA+TGG | - | chr8_1:72747098-72747117 | Msa1212730:CDS | 30.0% | |
| ! | TTTTTCTCAAAGTTACCCTG+AGG | + | chr8_1:72744229-72744248 | None:intergenic | 35.0% |
| ACGGAGTTAGACTTTGAATT+TGG | + | chr8_1:72744551-72744570 | None:intergenic | 35.0% | |
| AGAAAAACGAAAACAGGTCA+GGG | + | chr8_1:72744577-72744596 | None:intergenic | 35.0% | |
| ! | TTCTCGAATACCGTATTTTC+GGG | - | chr8_1:72744593-72744612 | Msa1212730:three_prime_UTR | 35.0% |
| AACCTTATAGAAACCCTTAC+CGG | + | chr8_1:72744630-72744649 | None:intergenic | 35.0% | |
| ! | CGACTGTTATGGATTTTTGT+TGG | - | chr8_1:72744807-72744826 | Msa1212730:intron | 35.0% |
| GATGGAGGAAGAGAATAATA+AGG | - | chr8_1:72744880-72744899 | Msa1212730:intron | 35.0% | |
| AGGAAGAGAATAATAAGGTG+AGG | - | chr8_1:72744885-72744904 | Msa1212730:intron | 35.0% | |
| AAGAGAATAATAAGGTGAGG+AGG | - | chr8_1:72744888-72744907 | Msa1212730:intron | 35.0% | |
| AGAAGTTGAGGATTTGTATG+AGG | - | chr8_1:72745123-72745142 | Msa1212730:intron | 35.0% | |
| GTTTGAGAAGAAAGATGAGA+AGG | - | chr8_1:72745153-72745172 | Msa1212730:intron | 35.0% | |
| !!! | GAGTTTTATTGTGTGTTGTG+TGG | - | chr8_1:72745175-72745194 | Msa1212730:intron | 35.0% |
| AGTTTAAGAGTGAGAAGCAA+TGG | - | chr8_1:72745203-72745222 | Msa1212730:intron | 35.0% | |
| ATCAAGTGAATCCTTGAACT+CGG | + | chr8_1:72745269-72745288 | None:intergenic | 35.0% | |
| TCATTGTCACCATCATCATT+CGG | + | chr8_1:72745457-72745476 | None:intergenic | 35.0% | |
| GTTCTTGAAACAATGGTATC+TGG | - | chr8_1:72745574-72745593 | Msa1212730:CDS | 35.0% | |
| TTCTCACTCTCAATTTGAGT+TGG | + | chr8_1:72745748-72745767 | None:intergenic | 35.0% | |
| AGAGTGAGAATGAGAATGAT+GGG | - | chr8_1:72745758-72745777 | Msa1212730:CDS | 35.0% | |
| GAAACTAATGTGCCTACTAA+TGG | - | chr8_1:72745865-72745884 | Msa1212730:CDS | 35.0% | |
| ! | CCTCATTTTCCTCGAAATAT+TGG | + | chr8_1:72745954-72745973 | None:intergenic | 35.0% |
| CCAATATTTCGAGGAAAATG+AGG | - | chr8_1:72745951-72745970 | Msa1212730:CDS | 35.0% | |
| TTCGAGGAAAATGAGGATAA+TGG | - | chr8_1:72745958-72745977 | Msa1212730:CDS | 35.0% | |
| !! | CTGGTTGAAAGTTTTGATCT+GGG | + | chr8_1:72746072-72746091 | None:intergenic | 35.0% |
| !! | TCTGGTTGAAAGTTTTGATC+TGG | + | chr8_1:72746073-72746092 | None:intergenic | 35.0% |
| AGATCAAAACTTTCAACCAG+AGG | - | chr8_1:72746072-72746091 | Msa1212730:CDS | 35.0% | |
| !!! | TACATTTGGTTTTCTTCCTC+TGG | + | chr8_1:72746091-72746110 | None:intergenic | 35.0% |
| CATACATATCTCAGTAGTCA+TGG | + | chr8_1:72746156-72746175 | None:intergenic | 35.0% | |
| AGATATAACCAACGTTATCC+TGG | + | chr8_1:72746384-72746403 | None:intergenic | 35.0% | |
| CTTCTGTTTAATGGAAGACA+TGG | + | chr8_1:72746427-72746446 | None:intergenic | 35.0% | |
| GAAATCAGAATAGAGCAGAA+AGG | + | chr8_1:72746450-72746469 | None:intergenic | 35.0% | |
| CTTGAAATTTGATGAGCAAG+AGG | + | chr8_1:72746564-72746583 | None:intergenic | 35.0% | |
| AATTGAAGTAGTCGCATATC+TGG | + | chr8_1:72746768-72746787 | None:intergenic | 35.0% | |
| ! | TTCATAAGGGTATGGATACA+GGG | - | chr8_1:72746873-72746892 | Msa1212730:CDS | 35.0% |
| GGGTGAGATCTATTGAAATT+CGG | + | chr8_1:72746904-72746923 | None:intergenic | 35.0% | |
| TGTTATCTGACATACAGAGA+GGG | + | chr8_1:72746924-72746943 | None:intergenic | 35.0% | |
| ATGTTATCTGACATACAGAG+AGG | + | chr8_1:72746925-72746944 | None:intergenic | 35.0% | |
| AAATAGTTTACGGATGGCAA+TGG | - | chr8_1:72747104-72747123 | Msa1212730:CDS | 35.0% | |
| !! | TGTAATAAGAGTATTGGTGC+TGG | - | chr8_1:72747192-72747211 | Msa1212730:five_prime_UTR | 35.0% |
| GAAGAGGATTTGAGAACGAT+GGG | + | chr8_1:72744522-72744541 | None:intergenic | 40.0% | |
| AGAAGAGGATTTGAGAACGA+TGG | + | chr8_1:72744523-72744542 | None:intergenic | 40.0% | |
| TTGAATTTGGATCGGAGAAG+AGG | + | chr8_1:72744538-72744557 | None:intergenic | 40.0% | |
| GAGAAAAACGAAAACAGGTC+AGG | + | chr8_1:72744578-72744597 | None:intergenic | 40.0% | |
| ! | TCTCGAATACCGTATTTTCG+GGG | - | chr8_1:72744594-72744613 | Msa1212730:three_prime_UTR | 40.0% |
| !! | TACCGTATTTTCGGGGTTTT+CGG | - | chr8_1:72744601-72744620 | Msa1212730:three_prime_UTR | 40.0% |
| ATCCGAAAACCCCGAAAATA+CGG | + | chr8_1:72744606-72744625 | None:intergenic | 40.0% | |
| TTCCGGTAAGGGTTTCTATA+AGG | - | chr8_1:72744625-72744644 | Msa1212730:three_prime_UTR | 40.0% | |
| ! | AGGGATTGATTCTGTTAGAC+AGG | - | chr8_1:72744712-72744731 | Msa1212730:three_prime_UTR | 40.0% |
| CTATCCAAATTCCCCATAAG+AGG | + | chr8_1:72744740-72744759 | None:intergenic | 40.0% | |
| ! | GTTGGGATTTTCGACTGTTA+TGG | - | chr8_1:72744796-72744815 | Msa1212730:intron | 40.0% |
| GAATAATAAGGTGAGGAGGA+AGG | - | chr8_1:72744892-72744911 | Msa1212730:intron | 40.0% | |
| !! | TGGCTGATTTTGTGAAGAAG+AGG | - | chr8_1:72744948-72744967 | Msa1212730:intron | 40.0% |
| !! | GGCTGATTTTGTGAAGAAGA+GGG | - | chr8_1:72744949-72744968 | Msa1212730:intron | 40.0% |
| GGTGAAGAAGAATTTGGAGA+TGG | - | chr8_1:72744994-72745013 | Msa1212730:intron | 40.0% | |
| !! | GGTTGATGAAGAAGAAGTTG+AGG | - | chr8_1:72745111-72745130 | Msa1212730:intron | 40.0% |
| ! | TGAGCAGAGTAAGAAGCATA+AGG | - | chr8_1:72745234-72745253 | Msa1212730:intron | 40.0% |
| !! | GGATTCACTTGATGATGAAG+AGG | - | chr8_1:72745276-72745295 | Msa1212730:intron | 40.0% |
| AGAGGAGAGATTAGAAAGTG+AGG | - | chr8_1:72745345-72745364 | Msa1212730:intron | 40.0% | |
| AGATTAGAAAGTGAGGAGGA+TGG | - | chr8_1:72745352-72745371 | Msa1212730:intron | 40.0% | |
| GAGAGTGAGAATGAGAATGA+TGG | - | chr8_1:72745757-72745776 | Msa1212730:CDS | 40.0% | |
| GAGTGAGAATGAGAATGATG+GGG | - | chr8_1:72745759-72745778 | Msa1212730:CDS | 40.0% | |
| !!! | GCTCTACGTTTCTTTTTTGC+AGG | + | chr8_1:72745814-72745833 | None:intergenic | 40.0% |
| ACGTAGAGCAAAGAAAGAGA+AGG | - | chr8_1:72745825-72745844 | Msa1212730:CDS | 40.0% | |
| CGTAGAGCAAAGAAAGAGAA+GGG | - | chr8_1:72745826-72745845 | Msa1212730:CDS | 40.0% | |
| AAAGAGAAGGGTGGGAAAAA+TGG | - | chr8_1:72745838-72745857 | Msa1212730:CDS | 40.0% | |
| AAGAGAAGGGTGGGAAAAAT+GGG | - | chr8_1:72745839-72745858 | Msa1212730:CDS | 40.0% | |
| ! | GTCTAGTTCCCAATATTTCG+AGG | - | chr8_1:72745942-72745961 | Msa1212730:CDS | 40.0% |
| ! | GAGGAAAATGAGGATAATGG+CGG | - | chr8_1:72745961-72745980 | Msa1212730:CDS | 40.0% |
| GCAGAAAGGCTTCTGTTTAA+TGG | + | chr8_1:72746436-72746455 | None:intergenic | 40.0% | |
| AAATTTGATGAGCAAGAGGG+AGG | + | chr8_1:72746560-72746579 | None:intergenic | 40.0% | |
| GCAGCAATGAAAAGTCGATA+AGG | - | chr8_1:72746688-72746707 | Msa1212730:CDS | 40.0% | |
| ! | ATATCATCGAGTGGTTTTCC+AGG | - | chr8_1:72746741-72746760 | Msa1212730:CDS | 40.0% |
| TAAATTGTAGCTCAGCCTTC+CGG | - | chr8_1:72746824-72746843 | Msa1212730:CDS | 40.0% | |
| ATCCATACCCTTATGAACTG+TGG | + | chr8_1:72746870-72746889 | None:intergenic | 40.0% | |
| ! | GTTCATAAGGGTATGGATAC+AGG | - | chr8_1:72746872-72746891 | Msa1212730:CDS | 40.0% |
| !!! | GTTTTTCTAGAGTGACCAGA+TGG | - | chr8_1:72747012-72747031 | Msa1212730:CDS | 40.0% |
| AATGGAATCTTAGCAAGCAC+AGG | - | chr8_1:72747066-72747085 | Msa1212730:CDS | 40.0% | |
| GCAATGGAATCGAGATCTAT+CGG | - | chr8_1:72747120-72747139 | Msa1212730:CDS | 40.0% | |
| CAATGGAATCGAGATCTATC+GGG | - | chr8_1:72747121-72747140 | Msa1212730:CDS | 40.0% | |
| TAAGCTGATCGGAGTTCTTC+CGG | + | chr8_1:72744359-72744378 | None:intergenic | 45.0% | |
| AAGAACTCCGATCAGCTTAC+CGG | - | chr8_1:72744360-72744379 | Msa1212730:three_prime_UTR | 45.0% | |
| ! | CTGATTTGACGAGCTTGTCA+GGG | + | chr8_1:72744406-72744425 | None:intergenic | 45.0% |
| TTGTAGCTCCTGAAACTGAG+CGG | + | chr8_1:72744450-72744469 | None:intergenic | 45.0% | |
| !! | TTTTCGGGGTTTTCGGATTC+CGG | - | chr8_1:72744608-72744627 | Msa1212730:three_prime_UTR | 45.0% |
| TGTTAGACAGGCTCCTCTTA+TGG | - | chr8_1:72744724-72744743 | Msa1212730:three_prime_UTR | 45.0% | |
| GTTAGACAGGCTCCTCTTAT+GGG | - | chr8_1:72744725-72744744 | Msa1212730:three_prime_UTR | 45.0% | |
| TTAGACAGGCTCCTCTTATG+GGG | - | chr8_1:72744726-72744745 | Msa1212730:three_prime_UTR | 45.0% | |
| TTTGGATAGTCCTTATGCGC+AGG | - | chr8_1:72744751-72744770 | Msa1212730:exon | 45.0% | |
| TAGTCCTTATGCGCAGGTTA+CGG | - | chr8_1:72744757-72744776 | Msa1212730:CDS | 45.0% | |
| GGAGATGGAGAAGAAGAAAG+AGG | - | chr8_1:72745009-72745028 | Msa1212730:intron | 45.0% | |
| GATGGAGAAGAAGAAAGAGG+AGG | - | chr8_1:72745012-72745031 | Msa1212730:intron | 45.0% | |
| GAAGAAGAAAGAGGAGGAGA+AGG | - | chr8_1:72745018-72745037 | Msa1212730:intron | 45.0% | |
| TCATCAACCTTAGCCCAATC+AGG | + | chr8_1:72745100-72745119 | None:intergenic | 45.0% | |
| AGAGGAGTTAGAAGCTGAAG+TGG | - | chr8_1:72745294-72745313 | Msa1212730:intron | 45.0% | |
| ACGAGGAAGGTGAAAGTGAA+GGG | - | chr8_1:72745317-72745336 | Msa1212730:intron | 45.0% | |
| GGAGAGATTAGAAAGTGAGG+AGG | - | chr8_1:72745348-72745367 | Msa1212730:intron | 45.0% | |
| ! | CAGAAGACGAGAGTGCAAAT+GGG | - | chr8_1:72745425-72745444 | Msa1212730:CDS | 45.0% |
| ! | AGAAGACGAGAGTGCAAATG+GGG | - | chr8_1:72745426-72745445 | Msa1212730:CDS | 45.0% |
| AACAATGGTATCTGGGCACA+AGG | - | chr8_1:72745582-72745601 | Msa1212730:CDS | 45.0% | |
| ACAATGGTATCTGGGCACAA+GGG | - | chr8_1:72745583-72745602 | Msa1212730:CDS | 45.0% | |
| AGTTGGAGTTTCAGAAGCCT+CGG | + | chr8_1:72745731-72745750 | None:intergenic | 45.0% | |
| ! | GAGAATGAGAATGATGGGGT+TGG | - | chr8_1:72745763-72745782 | Msa1212730:CDS | 45.0% |
| AGAGCAAAGAAAGAGAAGGG+TGG | - | chr8_1:72745829-72745848 | Msa1212730:CDS | 45.0% | |
| GAGCAAAGAAAGAGAAGGGT+GGG | - | chr8_1:72745830-72745849 | Msa1212730:CDS | 45.0% | |
| AGAGAAGGGTGGGAAAAATG+GGG | - | chr8_1:72745840-72745859 | Msa1212730:CDS | 45.0% | |
| GGTAAAGAGAATGAGCAGGT+GGG | - | chr8_1:72745982-72746001 | Msa1212730:CDS | 45.0% | |
| GCACAATACAGGAACAGAAC+AGG | + | chr8_1:72746134-72746153 | None:intergenic | 45.0% | |
| CAGTAGTCATGGCACAATAC+AGG | + | chr8_1:72746145-72746164 | None:intergenic | 45.0% | |
| ! | TTTTTGCGAGACATGTGAGC+AGG | - | chr8_1:72746513-72746532 | Msa1212730:CDS | 45.0% |
| CATAAACATCTGAGCGACTC+TGG | - | chr8_1:72746661-72746680 | Msa1212730:CDS | 45.0% | |
| ATAACATGCTTTCTGCCGGA+AGG | + | chr8_1:72746842-72746861 | None:intergenic | 45.0% | |
| TGCCACAGTTCATAAGGGTA+TGG | - | chr8_1:72746865-72746884 | Msa1212730:CDS | 45.0% | |
| TTCTGTCGTCGTCAACCTCA+GGG | - | chr8_1:72744211-72744230 | Msa1212730:three_prime_UTR | 50.0% | |
| ! | CGAAGCAACAATGGCATCGA+CGG | - | chr8_1:72744286-72744305 | Msa1212730:three_prime_UTR | 50.0% |
| CGATGCCACTACGAAGTTCT+CGG | - | chr8_1:72744314-72744333 | Msa1212730:three_prime_UTR | 50.0% | |
| GTAGACCGAGAACTTCGTAG+TGG | + | chr8_1:72744322-72744341 | None:intergenic | 50.0% | |
| CGAGTTTCCGGTAAGCTGAT+CGG | + | chr8_1:72744370-72744389 | None:intergenic | 50.0% | |
| ATTTGACGAGCTTGTCAGGG+TGG | + | chr8_1:72744403-72744422 | None:intergenic | 50.0% | |
| ! | CCTGATTTGACGAGCTTGTC+AGG | + | chr8_1:72744407-72744426 | None:intergenic | 50.0% |
| CCTGACAAGCTCGTCAAATC+AGG | - | chr8_1:72744404-72744423 | Msa1212730:three_prime_UTR | 50.0% | |
| !! | TGGATCGGAGAGTACCTCAT+AGG | + | chr8_1:72744477-72744496 | None:intergenic | 50.0% |
| ! | TGAGGTACTCTCCGATCCAA+AGG | - | chr8_1:72744478-72744497 | Msa1212730:three_prime_UTR | 50.0% |
| CCAAGCTCGTTCCTTTGGAT+CGG | + | chr8_1:72744492-72744511 | None:intergenic | 50.0% | |
| TCGTACCAAGCTCGTTCCTT+TGG | + | chr8_1:72744497-72744516 | None:intergenic | 50.0% | |
| CGAAAACAGGTCAGGGACAA+CGG | + | chr8_1:72744570-72744589 | None:intergenic | 50.0% | |
| ! | GGGTTTTCGGATTCCGGTAA+GGG | - | chr8_1:72744614-72744633 | Msa1212730:three_prime_UTR | 50.0% |
| GGCTCCTCTTATGGGGAATT+TGG | - | chr8_1:72744733-72744752 | Msa1212730:three_prime_UTR | 50.0% | |
| AAAGCCGTAACCTGCGCATA+AGG | + | chr8_1:72744764-72744783 | None:intergenic | 50.0% | |
| GGCAGATGAGTATGATGCGA+TGG | - | chr8_1:72744829-72744848 | Msa1212730:intron | 50.0% | |
| GATGAGTATGATGCGATGGC+AGG | - | chr8_1:72744833-72744852 | Msa1212730:intron | 50.0% | |
| AACCTCCGCGACTTCCTATT+CGG | + | chr8_1:72744860-72744879 | None:intergenic | 50.0% | |
| AGAAAGAGGAGGAGAAGGAG+AGG | - | chr8_1:72745023-72745042 | Msa1212730:intron | 50.0% | |
| GAAGGAGAGGAAGAGGAAGT+TGG | - | chr8_1:72745036-72745055 | Msa1212730:intron | 50.0% | |
| GAGGAAGAGGAAGTTGGAGA+TGG | - | chr8_1:72745042-72745061 | Msa1212730:intron | 50.0% | |
| AGAGGAAGTTGGAGATGGAG+AGG | - | chr8_1:72745047-72745066 | Msa1212730:intron | 50.0% | |
| GAAGTTGGAGATGGAGAGGA+AGG | - | chr8_1:72745051-72745070 | Msa1212730:intron | 50.0% | |
| TGGCTTATGAGGAGCCTGAT+TGG | - | chr8_1:72745083-72745102 | Msa1212730:intron | 50.0% | |
| GGCTTATGAGGAGCCTGATT+GGG | - | chr8_1:72745084-72745103 | Msa1212730:intron | 50.0% | |
| GGAGAAAGTTGCCGAGTTCA+AGG | - | chr8_1:72745255-72745274 | Msa1212730:intron | 50.0% | |
| GTTAGAAGCTGAAGTGGACG+AGG | - | chr8_1:72745300-72745319 | Msa1212730:intron | 50.0% | |
| GACGAGGAAGGTGAAAGTGA+AGG | - | chr8_1:72745316-72745335 | Msa1212730:intron | 50.0% | |
| CGAGGAAGGTGAAAGTGAAG+GGG | - | chr8_1:72745318-72745337 | Msa1212730:intron | 50.0% | |
| GAAGGTGAAAGTGAAGGGGT+TGG | - | chr8_1:72745322-72745341 | Msa1212730:intron | 50.0% | |
| TGAAAGTGAAGGGGTTGGAG+AGG | - | chr8_1:72745327-72745346 | Msa1212730:intron | 50.0% | |
| AAAGTGAGGAGGATGGCGTT+GGG | - | chr8_1:72745359-72745378 | Msa1212730:CDS | 50.0% | |
| !! | TGGCGTTGGGGTTGATGATT+TGG | - | chr8_1:72745372-72745391 | Msa1212730:CDS | 50.0% |
| ! | GCAGAAGACGAGAGTGCAAA+TGG | - | chr8_1:72745424-72745443 | Msa1212730:CDS | 50.0% |
| TGCTGAGCATGCAGAAGATG+AGG | - | chr8_1:72745489-72745508 | Msa1212730:CDS | 50.0% | |
| TGGGGTTCTTGAAGCAATGC+TGG | - | chr8_1:72745663-72745682 | Msa1212730:CDS | 50.0% | |
| GTTCTTGAAGCAATGCTGGC+TGG | - | chr8_1:72745667-72745686 | Msa1212730:CDS | 50.0% | |
| ! | GGCTTGTGTGTTGAAGCACT+GGG | + | chr8_1:72745709-72745728 | None:intergenic | 50.0% |
| GTTGGAGTTTCAGAAGCCTC+GGG | + | chr8_1:72745730-72745749 | None:intergenic | 50.0% | |
| !! | GAATGATGGGGTTGGTGCTA+TGG | - | chr8_1:72745771-72745790 | Msa1212730:CDS | 50.0% |
| TGGCGGTAAAGAGAATGAGC+AGG | - | chr8_1:72745978-72745997 | Msa1212730:CDS | 50.0% | |
| CGGTAAAGAGAATGAGCAGG+TGG | - | chr8_1:72745981-72746000 | Msa1212730:CDS | 50.0% | |
| GCATGTAGCCAGGATAACGT+TGG | - | chr8_1:72746373-72746392 | Msa1212730:CDS | 50.0% | |
| GTGAGCAGGAGTTTGAGTCA+AGG | - | chr8_1:72746527-72746546 | Msa1212730:CDS | 50.0% | |
| AGTAGTCGCATATCTGGACC+TGG | + | chr8_1:72746762-72746781 | None:intergenic | 50.0% | |
| CTTCTGTCGTCGTCAACCTC+AGG | - | chr8_1:72744210-72744229 | Msa1212730:three_prime_UTR | 55.0% | |
| TCTACCTCGCGAATGCTCAC+CGG | - | chr8_1:72744337-72744356 | Msa1212730:three_prime_UTR | 55.0% | |
| CTGAAACTGAGCGGTGGCTT+CGG | + | chr8_1:72744441-72744460 | None:intergenic | 55.0% | |
| TAGCTCCTGAAACTGAGCGG+TGG | + | chr8_1:72744447-72744466 | None:intergenic | 55.0% | |
| GGAGCTACAACACGCCTATG+AGG | - | chr8_1:72744460-72744479 | Msa1212730:three_prime_UTR | 55.0% | |
| CCGATCCAAAGGAACGAGCT+TGG | - | chr8_1:72744489-72744508 | Msa1212730:three_prime_UTR | 55.0% | |
| ! | GGGGTTTTCGGATTCCGGTA+AGG | - | chr8_1:72744613-72744632 | Msa1212730:three_prime_UTR | 55.0% |
| ATGCGATGGCAGGTCCGAAT+AGG | - | chr8_1:72744843-72744862 | Msa1212730:intron | 55.0% | |
| CAGGTCCGAATAGGAAGTCG+CGG | - | chr8_1:72744852-72744871 | Msa1212730:intron | 55.0% | |
| TAGGAAGTCGCGGAGGTTGA+TGG | - | chr8_1:72744862-72744881 | Msa1212730:intron | 55.0% | |
| AGGAGGAGAAGGAGAGGAAG+AGG | - | chr8_1:72745029-72745048 | Msa1212730:intron | 55.0% | |
| TGGAGATGGAGAGGAAGGAG+AGG | - | chr8_1:72745056-72745075 | Msa1212730:intron | 55.0% | |
| GGAGATGGAGAGGAAGGAGA+GGG | - | chr8_1:72745057-72745076 | Msa1212730:intron | 55.0% | |
| GGAGAGGGCTATGGCTTATG+AGG | - | chr8_1:72745072-72745091 | Msa1212730:intron | 55.0% | |
| TGAGGAGCCTGATTGGGCTA+AGG | - | chr8_1:72745090-72745109 | Msa1212730:intron | 55.0% | |
| GAAGCTGAAGTGGACGAGGA+AGG | - | chr8_1:72745304-72745323 | Msa1212730:intron | 55.0% | |
| GAAAGTGAGGAGGATGGCGT+TGG | - | chr8_1:72745358-72745377 | Msa1212730:CDS | 55.0% | |
| AAGTGAGGAGGATGGCGTTG+GGG | - | chr8_1:72745360-72745379 | Msa1212730:CDS | 55.0% | |
| GGGGTTGAGCCGAATGATGA+TGG | - | chr8_1:72745445-72745464 | Msa1212730:CDS | 55.0% | |
| GGGCTTGTGTGTTGAAGCAC+TGG | + | chr8_1:72745710-72745729 | None:intergenic | 55.0% | |
| TGCTTCAACACACAAGCCCG+AGG | - | chr8_1:72745711-72745730 | Msa1212730:CDS | 55.0% | |
| CACATGTGAGGCATGTAGCC+AGG | - | chr8_1:72746363-72746382 | Msa1212730:CDS | 55.0% | |
| TCTTCCGGTGAGCATTCGCG+AGG | + | chr8_1:72744344-72744363 | None:intergenic | 60.0% | |
| ! | GGCGTTGGAGAGCGAGTTTC+CGG | + | chr8_1:72744382-72744401 | None:intergenic | 60.0% |
| CGGTGGCTTCGGATTGAGAG+AGG | + | chr8_1:72744430-72744449 | None:intergenic | 60.0% | |
| CGAAGCCACCGCTCAGTTTC+AGG | - | chr8_1:72744439-72744458 | Msa1212730:three_prime_UTR | 60.0% | |
| GTCCGAATAGGAAGTCGCGG+AGG | - | chr8_1:72744855-72744874 | Msa1212730:intron | 60.0% | |
| !! | GAAGTCGCGGAGGTTGATGG+AGG | - | chr8_1:72744865-72744884 | Msa1212730:intron | 60.0% |
| AGGTGAGGAGGAAGGCGAAG+AGG | - | chr8_1:72744900-72744919 | Msa1212730:intron | 60.0% | |
| GGTGAGGAGGAAGGCGAAGA+GGG | - | chr8_1:72744901-72744920 | Msa1212730:intron | 60.0% | |
| GGAGAGGAAGGAGAGGGCTA+TGG | - | chr8_1:72745063-72745082 | Msa1212730:intron | 60.0% | |
| TGGTATCTGGGCACAAGGGC+CGG | - | chr8_1:72745587-72745606 | Msa1212730:CDS | 60.0% | |
| CGAGCTTGTCAGGGTGGCGT+TGG | + | chr8_1:72744397-72744416 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 72744205 | 72747260 | 72744205 | ID=Msa1212730;Name=Msa1212730 |
| chr8_1 | mRNA | 72744205 | 72747260 | 72744205 | ID=Msa1212730-mRNA-1;Parent=Msa1212730;Name=Msa1212730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=91|1|1|1|1|1|3|552|639 |
| chr8_1 | exon | 72744205 | 72744814 | 72744205 | ID=Msa1212730-mRNA-1:exon:24603;Parent=Msa1212730-mRNA-1 |
| chr8_1 | exon | 72744917 | 72744966 | 72744917 | ID=Msa1212730-mRNA-1:exon:24602;Parent=Msa1212730-mRNA-1 |
| chr8_1 | exon | 72745358 | 72747260 | 72745358 | ID=Msa1212730-mRNA-1:exon:24601;Parent=Msa1212730-mRNA-1 |
| chr8_1 | five_prime_UTR | 72747170 | 72747260 | 72747170 | ID=Msa1212730-mRNA-1:five_prime_utr;Parent=Msa1212730-mRNA-1 |
| chr8_1 | CDS | 72745358 | 72747169 | 72745358 | ID=Msa1212730-mRNA-1:cds;Parent=Msa1212730-mRNA-1 |
| chr8_1 | CDS | 72744917 | 72744966 | 72744917 | ID=Msa1212730-mRNA-1:cds;Parent=Msa1212730-mRNA-1 |
| chr8_1 | CDS | 72744757 | 72744814 | 72744757 | ID=Msa1212730-mRNA-1:cds;Parent=Msa1212730-mRNA-1 |
| chr8_1 | three_prime_UTR | 72744205 | 72744756 | 72744205 | ID=Msa1212730-mRNA-1:three_prime_utr;Parent=Msa1212730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
