AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1332280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332280 MtrunA17_Chr8g0353771 92.121 165 12 1 1 164 1 165 8.47e-105 307
Msa1332280 MtrunA17_Chr1g0178021 98.851 87 1 0 91 177 4 90 3.00e-54 175
Msa1332280 MtrunA17_Chr1g0178031 95.890 73 3 0 20 92 4 76 6.04e-47 148
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1332280 AT5G22130.1 69.822 169 50 1 2 169 14 182 5.90e-82 249
Msa1332280 AT5G22130.3 70.060 167 49 1 4 169 1 167 1.28e-80 246
Msa1332280 AT5G22130.2 62.434 189 50 2 2 169 14 202 7.21e-77 237

Find 103 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAATCTTATTTCTTTATT+TGG 0.034902 8_4:+52192600 None:intergenic
TGGAAAGATGAAAGTTATTT+TGG 0.152108 8_4:+52189546 None:intergenic
TTTGGTATCCTTAAAGAAAA+AGG 0.211456 8_4:-52189342 Msa1332280:three_prime_UTR
TTATATCTTAAATTATAATA+TGG 0.248847 8_4:+52189429 None:intergenic
GCGGCTTCTCTTGTTGCTTC+TGG 0.249848 8_4:-52192341 Msa1332280:CDS
AACACGACTTTATGTCGTTT+TGG 0.269460 8_4:-52192693 Msa1332280:five_prime_UTR
CCCTTAACTATAAGCAGTTT+TGG 0.284277 8_4:-52189360 Msa1332280:three_prime_UTR
GTCCCAATGGTGAACGTAAA+TGG 0.291699 8_4:+52189857 None:intergenic
ACCAAAACTGCTTATAGTTA+AGG 0.328925 8_4:+52189359 None:intergenic
ATCATTTCATTCATCTCTCT+TGG 0.335575 8_4:-52192253 Msa1332280:CDS
ACACTTACAGTAACTCGTTT+GGG 0.347749 8_4:+52193254 None:intergenic
GAAATCTTATTTCTTTATTT+GGG 0.348994 8_4:+52192601 None:intergenic
ACATAAAGTCGTGTTTGATT+TGG 0.350116 8_4:+52192701 None:intergenic
TCATTTCATTCATCTCTCTT+GGG 0.372099 8_4:-52192252 Msa1332280:CDS
GCCGGTCGCGTCGTGCTTGA+CGG 0.373985 8_4:+52193357 None:intergenic
GTATGGTTCTGCTTCTGTAT+TGG 0.375378 8_4:-52189769 Msa1332280:CDS
GAGAGATGAATGAAATGATT+AGG 0.378291 8_4:+52192257 None:intergenic
TCTGTATTGGATTAAATTGA+TGG 0.384098 8_4:-52189756 Msa1332280:CDS
TGGTTTGGTCGGTCTTTGTA+AGG 0.396376 8_4:+52192721 None:intergenic
TACACTTACAGTAACTCGTT+TGG 0.409517 8_4:+52193253 None:intergenic
GGAGAAGTTGGTGGTGGTAG+AGG 0.411399 8_4:+52192530 None:intergenic
AATTTAAGATATAATATAAG+AGG 0.411558 8_4:-52189420 Msa1332280:three_prime_UTR
AAGTTTCTCTTCTCTTCTGC+AGG 0.413221 8_4:-52192227 Msa1332280:intron
ATATACTGGAAAGTTTATCT+TGG 0.419487 8_4:+52189312 None:intergenic
CGATAAGTGGTTCTTTGATA+AGG 0.422462 8_4:+52192311 None:intergenic
CCAAAACTGCTTATAGTTAA+GGG 0.424877 8_4:+52189360 None:intergenic
AAGTCGTGTTTGATTTGGTT+TGG 0.427666 8_4:+52192706 None:intergenic
GAATCAGAGATGAGAGGAGA+TGG 0.429173 8_4:+52193304 None:intergenic
TTAAATGCAGATATACTTGT+GGG 0.429398 8_4:-52189962 Msa1332280:intron
GTAATAATCAACTTAGTTCA+AGG 0.433989 8_4:+52193467 None:intergenic
ATCCATTTACGTTCACCATT+GGG 0.436059 8_4:-52189859 Msa1332280:CDS
CGTGTTTGATTTGGTTTGGT+CGG 0.447510 8_4:+52192710 None:intergenic
TTGGGTTTGTGTTTGATTTG+TGG 0.460261 8_4:-52192674 Msa1332280:five_prime_UTR
AGTAACTCGTTTGGGGCTTG+TGG 0.463636 8_4:+52193262 None:intergenic
AATCCATTTACGTTCACCAT+TGG 0.464929 8_4:-52189860 Msa1332280:CDS
TAAGATTTCGCTCCACCAAC+CGG 0.465136 8_4:-52192587 Msa1332280:five_prime_UTR
TCGTGCTTGACGGTGGGTGA+TGG 0.481294 8_4:+52193367 None:intergenic
GACTTACGATGGTGAGCGGT+GGG 0.491214 8_4:+52193552 None:intergenic
GAGAAGTTGGTGGTGGTAGA+GGG 0.492336 8_4:+52192531 None:intergenic
AAAAGCATGGCAGAGACAAC+GGG 0.495574 8_4:+52189818 None:intergenic
AACGGAGGAATCAGCGAAAG+AGG 0.497158 8_4:+52193584 None:intergenic
CATTTCATTCATCTCTCTTG+GGG 0.504192 8_4:-52192251 Msa1332280:CDS
TAATAATCAACTTAGTTCAA+GGG 0.514796 8_4:+52193468 None:intergenic
CGACAAGATGGAGGCTTAGC+CGG 0.515082 8_4:+52193339 None:intergenic
TGAGAAATTGTTGACGGCGG+AGG 0.520941 8_4:+52192557 None:intergenic
TGTTTCTGTTTCGTCACTGA+CGG 0.522290 8_4:+52192506 None:intergenic
ACCGTCAAGCACGACGCGAC+CGG 0.522683 8_4:-52193358 Msa1332280:five_prime_UTR
GTCACTGACGGTGGAGAAGT+TGG 0.523428 8_4:+52192518 None:intergenic
AGAATTCGAGTTCGACAAGA+TGG 0.523597 8_4:+52193327 None:intergenic
GGTCGCGTCGTGCTTGACGG+TGG 0.524548 8_4:+52193360 None:intergenic
AGAAGAAGAAAAGCGAGGAG+AGG 0.527124 8_4:+52192281 None:intergenic
CGTAGAGGATCAAAATCAAA+CGG 0.528470 8_4:+52192429 None:intergenic
GTCGCGTCGTGCTTGACGGT+GGG 0.531041 8_4:+52193361 None:intergenic
TACTAGTACTTATGAGCAGT+TGG 0.533456 8_4:-52189660 Msa1332280:three_prime_UTR
CTTAAATGCAGATATACTTG+TGG 0.542200 8_4:-52189963 Msa1332280:intron
TTGATACCCCTTGTTTCATG+AGG 0.546721 8_4:-52189392 Msa1332280:three_prime_UTR
CCCTTGTTTCATGAGGGTAC+CGG 0.552159 8_4:-52189385 Msa1332280:three_prime_UTR
GAGAGGAGAATAACGATAAG+TGG 0.552718 8_4:+52192298 None:intergenic
CGAATATCTAACCATGCCAT+TGG 0.556119 8_4:+52192479 None:intergenic
CTGGAGTGGCGAACAGAGAA+CGG 0.559309 8_4:-52193397 Msa1332280:five_prime_UTR
CAAAAGCATGGCAGAGACAA+CGG 0.567972 8_4:+52189817 None:intergenic
GCAACTACTCTGTCATGGCA+TGG 0.568403 8_4:-52189889 Msa1332280:CDS
GGGATCTGAGAAATTGTTGA+CGG 0.569860 8_4:+52192551 None:intergenic
ATCATTGTCTGTCTTATGAA+AGG 0.570058 8_4:-52189791 Msa1332280:CDS
TTCTGTTTCGTCACTGACGG+TGG 0.577866 8_4:+52192509 None:intergenic
ACCGGTACCCTCATGAAACA+AGG 0.579653 8_4:+52189384 None:intergenic
TGTCTGTCTTATGAAAGGTA+TGG 0.581341 8_4:-52189786 Msa1332280:CDS
TGCTTGACGGTGGGTGATGG+AGG 0.582716 8_4:+52193370 None:intergenic
TGATACCCCTTGTTTCATGA+GGG 0.582954 8_4:-52189391 Msa1332280:three_prime_UTR
CACTTACAGTAACTCGTTTG+GGG 0.587056 8_4:+52193255 None:intergenic
GGAGGATACAATCCGGTTGG+TGG 0.588718 8_4:+52192575 None:intergenic
TAGTACTTATGAGCAGTTGG+TGG 0.594548 8_4:-52189657 Msa1332280:three_prime_UTR
AGGCTCCGCCACTGAGAGAG+AGG 0.597299 8_4:+52193521 None:intergenic
TTATATTCTAAAGCTGCAGA+AGG 0.607717 8_4:-52189927 Msa1332280:CDS
GCAATCCTCTCTCTCAGTGG+CGG 0.614418 8_4:-52193526 Msa1332280:five_prime_UTR
ATTCGAGTTCGACAAGATGG+AGG 0.618123 8_4:+52193330 None:intergenic
AGCGGTGGGAAGAACAGCAA+CGG 0.619355 8_4:+52193566 None:intergenic
GGCGGAGGATACAATCCGGT+TGG 0.619391 8_4:+52192572 None:intergenic
AGACTTACGATGGTGAGCGG+TGG 0.619894 8_4:+52193551 None:intergenic
GACAATGATCCACAAAAGCA+TGG 0.620845 8_4:+52189805 None:intergenic
CCTCTGCAACTACTCTGTCA+TGG 0.622108 8_4:-52189894 Msa1332280:CDS
CTGCTTATAGTTAAGGGCAC+CGG 0.622614 8_4:+52189366 None:intergenic
ACGGAGGAATCAGCGAAAGA+GGG 0.626210 8_4:+52193585 None:intergenic
CATCTTGCCATTCTCCGTAG+AGG 0.629060 8_4:+52192414 None:intergenic
TAGGAAGAAGAAGAAAAGCG+AGG 0.632584 8_4:+52192276 None:intergenic
ACGTTCACCATTGGGACACG+CGG 0.637349 8_4:-52189851 Msa1332280:CDS
AGAATGGCAAGATGCACACA+TGG 0.640505 8_4:-52192405 Msa1332280:CDS
CCGGTACCCTCATGAAACAA+GGG 0.640988 8_4:+52189385 None:intergenic
AATGAAGAATCAGAGATGAG+AGG 0.641074 8_4:+52193298 None:intergenic
GACGGTGGAGAAGTTGGTGG+TGG 0.641322 8_4:+52192524 None:intergenic
AGAAACAGTCACCAATGGCA+TGG 0.643233 8_4:-52192490 Msa1332280:exon
TGACGGCGGAGGATACAATC+CGG 0.648478 8_4:+52192568 None:intergenic
CCATGACAGAGTAGTTGCAG+AGG 0.655039 8_4:+52189894 None:intergenic
CAGAGACTTACGATGGTGAG+CGG 0.656906 8_4:+52193548 None:intergenic
ATCTGAGAAATTGTTGACGG+CGG 0.660707 8_4:+52192554 None:intergenic
GAAACAGAAACAGTCACCAA+TGG 0.663051 8_4:-52192495 Msa1332280:exon
TCTGCAATCCTCTCTCTCAG+TGG 0.666572 8_4:-52193529 Msa1332280:five_prime_UTR
CGGTACCCTCATGAAACAAG+GGG 0.667012 8_4:+52189386 None:intergenic
AAAAGACAAGATACGCGCAG+AGG 0.671827 8_4:+52193422 None:intergenic
CGTTCACCATTGGGACACGC+GGG 0.676034 8_4:-52189850 Msa1332280:CDS
ACTGACGGTGGAGAAGTTGG+TGG 0.676459 8_4:+52192521 None:intergenic
GGTGGGAAGAACAGCAACGG+AGG 0.676969 8_4:+52193569 None:intergenic
AGGATTGCAGAGACTTACGA+TGG 0.726760 8_4:+52193541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATTTTTATAACATATATT+TGG + chr8_4:52189928-52189947 None:intergenic 10.0%
!!! AAAAAAAATAGATTTTATGT+AGG + chr8_4:52191684-52191703 None:intergenic 10.0%
!!! AATTTAAGATATAATATAAG+AGG - chr8_4:52193496-52193515 Msa1332280:five_prime_UTR 10.0%
!! AGTAATTTCCAAAAATTAAT+GGG + chr8_4:52189422-52189441 None:intergenic 15.0%
!! TAGTAATTTCCAAAAATTAA+TGG + chr8_4:52189423-52189442 None:intergenic 15.0%
!!! GAAATCTTATTTCTTTATTT+GGG + chr8_4:52190318-52190337 None:intergenic 15.0%
!!! GTATATTTTGTTGTAAAAAT+AGG - chr8_4:52191842-52191861 Msa1332280:intron 15.0%
!!! CTTTTTCTTTTTCTTTATTT+TGG + chr8_4:52192454-52192473 None:intergenic 15.0%
!!! AAGAATGTAAAATCTATTTT+TGG + chr8_4:52193329-52193348 None:intergenic 15.0%
!! TTGTAAAAAATACTGAAAAA+TGG + chr8_4:52193393-52193412 None:intergenic 15.0%
!! TAATAATCAACTTAGTTCAA+GGG + chr8_4:52189451-52189470 None:intergenic 20.0%
!!! ATTTGATTTTTGTTACATTG+TGG - chr8_4:52189738-52189757 Msa1332280:CDS 20.0%
!!! CAAAAAAAAGTTGTTATTAC+CGG - chr8_4:52189782-52189801 Msa1332280:CDS 20.0%
!!! TTTGATTTGTGGTTTTTTAT+TGG - chr8_4:52190253-52190272 Msa1332280:intron 20.0%
!!! CGAAATCTTATTTCTTTATT+TGG + chr8_4:52190319-52190338 None:intergenic 20.0%
!!! CTTATTTTTGAAAACTCTTT+AGG - chr8_4:52190818-52190837 Msa1332280:intron 20.0%
!!! CTTTAGAGAAAGAAAAAAAA+AGG - chr8_4:52192077-52192096 Msa1332280:intron 20.0%
!! GCATTAATTAATCATATACA+AGG + chr8_4:52192361-52192380 None:intergenic 20.0%
!!! TGTTTTTATTTTACCTTGAT+GGG - chr8_4:52192635-52192654 Msa1332280:five_prime_UTR 20.0%
!!! AAAACTGTTTTCATTATTTC+TGG + chr8_4:52192724-52192743 None:intergenic 20.0%
!! ATTTCCAAAAATTAATGGGT+AGG + chr8_4:52189418-52189437 None:intergenic 25.0%
! GTAATAATCAACTTAGTTCA+AGG + chr8_4:52189452-52189471 None:intergenic 25.0%
! ATTTGGACAACATAACATAA+TGG + chr8_4:52189911-52189930 None:intergenic 25.0%
! TCAAAAAAGAAGTTATATCG+TGG + chr8_4:52190040-52190059 None:intergenic 25.0%
!!! TCTTTTTTGATAAAACTGTG+TGG - chr8_4:52190050-52190069 Msa1332280:intron 25.0%
! AATAGTGTGATAAAAGAACT+TGG - chr8_4:52190074-52190093 Msa1332280:intron 25.0%
!!! TTTGTGGTTTTTTATTGGTT+TGG - chr8_4:52190258-52190277 Msa1332280:intron 25.0%
! ACTTATTGAAAAAAGCTAAG+AGG + chr8_4:52190750-52190769 None:intergenic 25.0%
! GTAGAAATAGCTTATACATA+AGG - chr8_4:52190898-52190917 Msa1332280:intron 25.0%
! CGATTAAATTGGTTATCAAA+AGG - chr8_4:52191118-52191137 Msa1332280:intron 25.0%
! TGTATGTTATGTATAGAATC+TGG - chr8_4:52191209-52191228 Msa1332280:intron 25.0%
! GGATTCAAGATCAATTTAAT+AGG - chr8_4:52191370-52191389 Msa1332280:intron 25.0%
! TTTAATAGGTTATTTGTGAC+TGG - chr8_4:52191384-52191403 Msa1332280:intron 25.0%
! TTAATAGGTTATTTGTGACT+GGG - chr8_4:52191385-52191404 Msa1332280:intron 25.0%
!!! AAGTTGTTTTTAGCCTATTT+TGG - chr8_4:52191633-52191652 Msa1332280:intron 25.0%
!! ATTAAGTTGTATATCCAAAC+TGG - chr8_4:52191912-52191931 Msa1332280:intron 25.0%
! TTGAGCACTTAATGAATAAT+TGG + chr8_4:52191952-52191971 None:intergenic 25.0%
! AAAAACATTTGGATTGCATT+TGG + chr8_4:52191988-52192007 None:intergenic 25.0%
! ATATAACTAGATAGCATCTA+AGG + chr8_4:52192286-52192305 None:intergenic 25.0%
!! AATTAATGCATACCCATTTT+TGG - chr8_4:52192372-52192391 Msa1332280:CDS 25.0%
! CTATAAAAGGTGAAATTGAT+CGG + chr8_4:52192400-52192419 None:intergenic 25.0%
! TCTTATCTCAGAACTATAAA+AGG + chr8_4:52192413-52192432 None:intergenic 25.0%
! TTGTAACTTTGACTATAAGA+TGG + chr8_4:52192495-52192514 None:intergenic 25.0%
!!! GTGTTTTTATTTTACCTTGA+TGG - chr8_4:52192634-52192653 Msa1332280:five_prime_UTR 25.0%
!!! GTTTTCATTATTTCTGGAAA+TGG + chr8_4:52192718-52192737 None:intergenic 25.0%
! TGAATGATTATATGCATTTC+CGG + chr8_4:52192766-52192785 None:intergenic 25.0%
! CTTAGCAACACAATAATAAA+GGG + chr8_4:52192876-52192895 None:intergenic 25.0%
! GAAACAATAAACATTTGCTT+AGG + chr8_4:52192934-52192953 None:intergenic 25.0%
! TTAAATGCAGATATACTTGT+GGG - chr8_4:52192954-52192973 Msa1332280:intron 25.0%
! TCTGTATTGGATTAAATTGA+TGG - chr8_4:52193160-52193179 Msa1332280:intron 25.0%
!! ATAAGTACTAGTACATTTTC+AGG + chr8_4:52193249-52193268 None:intergenic 25.0%
!! TGGAAAGATGAAAGTTATTT+TGG + chr8_4:52193373-52193392 None:intergenic 25.0%
! TTTGGTATCCTTAAAGAAAA+AGG - chr8_4:52193574-52193593 Msa1332280:five_prime_UTR 25.0%
CTTATCACTAAAGAATAGTG+TGG - chr8_4:52190102-52190121 Msa1332280:intron 30.0%
CGATATAATTTCTTTGTCGT+AGG - chr8_4:52190161-52190180 Msa1332280:intron 30.0%
ACATAAAGTCGTGTTTGATT+TGG + chr8_4:52190218-52190237 None:intergenic 30.0%
!!! GGTTTTTTATTGGTTTGGTT+CGG - chr8_4:52190263-52190282 Msa1332280:intron 30.0%
GAGAGATGAATGAAATGATT+AGG + chr8_4:52190662-52190681 None:intergenic 30.0%
ATCATTTCATTCATCTCTCT+TGG - chr8_4:52190663-52190682 Msa1332280:intron 30.0%
TCATTTCATTCATCTCTCTT+GGG - chr8_4:52190664-52190683 Msa1332280:intron 30.0%
!! GTATAAGCTATGGTCATTTT+TGG + chr8_4:52190983-52191002 None:intergenic 30.0%
AAGTCGTTATGTATAAGCTA+TGG + chr8_4:52190993-52191012 None:intergenic 30.0%
CATTAAGCGTTCGATTAAAT+TGG - chr8_4:52191107-52191126 Msa1332280:intron 30.0%
!! TAACGGGTTATTAGGAAATT+AGG - chr8_4:52191283-52191302 Msa1332280:intron 30.0%
TAATAGGTTATTTGTGACTG+GGG - chr8_4:52191386-52191405 Msa1332280:intron 30.0%
! GAAAGAGCATAGTTATAACT+GGG + chr8_4:52191453-52191472 None:intergenic 30.0%
ACAACTTATAGACATGACAT+AGG + chr8_4:52191620-52191639 None:intergenic 30.0%
AACAACAGCTATTACGTAAT+TGG + chr8_4:52191813-52191832 None:intergenic 30.0%
TATAGCATGATCATTTGTCA+TGG + chr8_4:52191884-52191903 None:intergenic 30.0%
CATTAAGTGCTCAATTAATC+TGG - chr8_4:52191958-52191977 Msa1332280:intron 30.0%
!!! TGCAATCCAAATGTTTTTTG+CGG - chr8_4:52191990-52192009 Msa1332280:intron 30.0%
! ATTGATGTCCTCTATTTTAC+TGG - chr8_4:52192255-52192274 Msa1332280:CDS 30.0%
! TTGATGTCCTCTATTTTACT+GGG - chr8_4:52192256-52192275 Msa1332280:CDS 30.0%
! CTAAAATTACTCCCCATTTT+AGG - chr8_4:52192325-52192344 Msa1332280:CDS 30.0%
AATTGATCGGAACCAAAAAT+GGG + chr8_4:52192387-52192406 None:intergenic 30.0%
AAATTGATCGGAACCAAAAA+TGG + chr8_4:52192388-52192407 None:intergenic 30.0%
! GATTGAGGAATTTCTGTTTT+GGG - chr8_4:52192544-52192563 Msa1332280:five_prime_UTR 30.0%
! TCCCTCTGCAATAAATTTTA+GGG - chr8_4:52192588-52192607 Msa1332280:five_prime_UTR 30.0%
ACCCTAAAATTTATTGCAGA+GGG + chr8_4:52192592-52192611 None:intergenic 30.0%
ATTGAAGTGAATCATTGTGA+TGG - chr8_4:52192662-52192681 Msa1332280:five_prime_UTR 30.0%
! TACGTTTTCACAAAGTAAAC+AGG - chr8_4:52192850-52192869 Msa1332280:intron 30.0%
GCTTAGCAACACAATAATAA+AGG + chr8_4:52192877-52192896 None:intergenic 30.0%
TAAGCAATGAATATGCTGAA+TGG - chr8_4:52192892-52192911 Msa1332280:intron 30.0%
CTTAAATGCAGATATACTTG+TGG - chr8_4:52192953-52192972 Msa1332280:intron 30.0%
!! TTATATTCTAAAGCTGCAGA+AGG - chr8_4:52192989-52193008 Msa1332280:intron 30.0%
ATCATTGTCTGTCTTATGAA+AGG - chr8_4:52193125-52193144 Msa1332280:intron 30.0%
! CATAACATTTCAGTTTTCAG+TGG + chr8_4:52193423-52193442 None:intergenic 30.0%
! CTTTTAAATGCTTGGTAAGT+GGG + chr8_4:52193459-52193478 None:intergenic 30.0%
CCAAAACTGCTTATAGTTAA+GGG + chr8_4:52193559-52193578 None:intergenic 30.0%
ACCAAAACTGCTTATAGTTA+AGG + chr8_4:52193560-52193579 None:intergenic 30.0%
! GTATCGTTCCTTTTTCTTTA+AGG + chr8_4:52193585-52193604 None:intergenic 30.0%
AATGAAGAATCAGAGATGAG+AGG + chr8_4:52189621-52189640 None:intergenic 35.0%
ACACTTACAGTAACTCGTTT+GGG + chr8_4:52189665-52189684 None:intergenic 35.0%
TACACTTACAGTAACTCGTT+TGG + chr8_4:52189666-52189685 None:intergenic 35.0%
AACGAATATGTCTTCACAGA+TGG + chr8_4:52189700-52189719 None:intergenic 35.0%
CAACATAACATAATGGCACA+AGG + chr8_4:52189904-52189923 None:intergenic 35.0%
TCTGCAGCACTATTACTATA+TGG - chr8_4:52189980-52189999 Msa1332280:intron 35.0%
! CACTATTACTATATGGTGGA+TGG - chr8_4:52189987-52190006 Msa1332280:intron 35.0%
AAAGAATAGTGTGGCAAAAC+TGG - chr8_4:52190111-52190130 Msa1332280:intron 35.0%
AAGAATAGTGTGGCAAAACT+GGG - chr8_4:52190112-52190131 Msa1332280:intron 35.0%
GCAAAACTGGGATAAAACTA+TGG - chr8_4:52190124-52190143 Msa1332280:intron 35.0%
ACTGGGATAAAACTATGGAA+TGG - chr8_4:52190129-52190148 Msa1332280:intron 35.0%
!! AAGTCGTGTTTGATTTGGTT+TGG + chr8_4:52190213-52190232 None:intergenic 35.0%
!! AACACGACTTTATGTCGTTT+TGG - chr8_4:52190223-52190242 Msa1332280:intron 35.0%
!!! ACACGACTTTATGTCGTTTT+GGG - chr8_4:52190224-52190243 Msa1332280:intron 35.0%
!! TTGGGTTTGTGTTTGATTTG+TGG - chr8_4:52190242-52190261 Msa1332280:intron 35.0%
CGTAGAGGATCAAAATCAAA+CGG + chr8_4:52190490-52190509 None:intergenic 35.0%
!! CGTTTGATTTTGATCCTCTA+CGG - chr8_4:52190488-52190507 Msa1332280:intron 35.0%
! TTACATCGTGTTTTCTGATG+CGG - chr8_4:52190556-52190575 Msa1332280:intron 35.0%
CGATAAGTGGTTCTTTGATA+AGG + chr8_4:52190608-52190627 None:intergenic 35.0%
CATTTCATTCATCTCTCTTG+GGG - chr8_4:52190665-52190684 Msa1332280:intron 35.0%
GTATAAGCTATGGTCATGTT+TGG + chr8_4:52191061-52191080 None:intergenic 35.0%
ATGACCATAGCTTATACGTA+AGG - chr8_4:52191064-52191083 Msa1332280:intron 35.0%
ATGACCTTACGTATAAGCTA+TGG + chr8_4:52191071-52191090 None:intergenic 35.0%
TCGAACGCTTAATGAGTAAT+CGG + chr8_4:52191101-52191120 None:intergenic 35.0%
! GTAGATTGAAAGGTTTTCTG+TGG - chr8_4:52191177-52191196 Msa1332280:intron 35.0%
TGCACTTTATAGAGCAAAAC+AGG - chr8_4:52191250-52191269 Msa1332280:intron 35.0%
TTTATAGAGCAAAACAGGTG+AGG - chr8_4:52191255-52191274 Msa1332280:intron 35.0%
AAACAGGTGAGGAGTTATAA+CGG - chr8_4:52191266-52191285 Msa1332280:intron 35.0%
!! AGGAGTTATAACGGGTTATT+AGG - chr8_4:52191275-52191294 Msa1332280:intron 35.0%
GGTTATTAGGAAATTAGGAG+AGG - chr8_4:52191288-52191307 Msa1332280:intron 35.0%
TCTCCAAAATCTCTATCATC+TGG + chr8_4:52191314-52191333 None:intergenic 35.0%
!! GATTTTGGAGAGAGATAGAA+AGG - chr8_4:52191323-52191342 Msa1332280:intron 35.0%
! AATGTTGTTCTCGGTTTTAC+TGG - chr8_4:52191410-52191429 Msa1332280:intron 35.0%
! ATGTTGTTCTCGGTTTTACT+GGG - chr8_4:52191411-52191430 Msa1332280:intron 35.0%
! GGAAAGAGCATAGTTATAAC+TGG + chr8_4:52191454-52191473 None:intergenic 35.0%
!!! TGTACTTCCCATTTTAGTTG+AGG - chr8_4:52191483-52191502 Msa1332280:intron 35.0%
GGATTTGCCTCAACTAAAAT+GGG + chr8_4:52191493-52191512 None:intergenic 35.0%
CCTTGCATTAATCATATGCA+GGG + chr8_4:52191514-52191533 None:intergenic 35.0%
TCCTTGCATTAATCATATGC+AGG + chr8_4:52191515-52191534 None:intergenic 35.0%
AGATTGTTTGACAGAGCTTA+AGG - chr8_4:52191588-52191607 Msa1332280:intron 35.0%
TAAAATGTGAGGGTTGTGTT+AGG - chr8_4:52191751-52191770 Msa1332280:intron 35.0%
! GAATCGACAAAATTTTGTCG+AGG + chr8_4:52191777-52191796 None:intergenic 35.0%
TTGTCACATAAGATCCAGTT+TGG + chr8_4:52191929-52191948 None:intergenic 35.0%
GAGAAAGAAAAAAAAAGGCG+AGG - chr8_4:52192082-52192101 Msa1332280:intron 35.0%
GAATTTGGAGAGAGATAAGA+AGG - chr8_4:52192153-52192172 Msa1332280:intron 35.0%
TCTGATTCTAGTCCAATGTA+TGG - chr8_4:52192213-52192232 Msa1332280:intron 35.0%
CTGATTCTAGTCCAATGTAT+GGG - chr8_4:52192214-52192233 Msa1332280:intron 35.0%
TGATTCTAGTCCAATGTATG+GGG - chr8_4:52192215-52192234 Msa1332280:intron 35.0%
GATTTGTCTCACCTAAAATG+GGG + chr8_4:52192339-52192358 None:intergenic 35.0%
GGATTTGTCTCACCTAAAAT+GGG + chr8_4:52192340-52192359 None:intergenic 35.0%
AGGATTTGTCTCACCTAAAA+TGG + chr8_4:52192341-52192360 None:intergenic 35.0%
! GGATTGAGGAATTTCTGTTT+TGG - chr8_4:52192543-52192562 Msa1332280:five_prime_UTR 35.0%
TTTATTGCAGAGGGACAAAA+TGG + chr8_4:52192583-52192602 None:intergenic 35.0%
! GTCCCTCTGCAATAAATTTT+AGG - chr8_4:52192587-52192606 Msa1332280:five_prime_UTR 35.0%
GACCCTAAAATTTATTGCAG+AGG + chr8_4:52192593-52192612 None:intergenic 35.0%
TTTGACATGTTCATCGTTTC+CGG - chr8_4:52192744-52192763 Msa1332280:intron 35.0%
AATCCATTTACGTTCACCAT+TGG - chr8_4:52193056-52193075 Msa1332280:intron 35.0%
ATCCATTTACGTTCACCATT+GGG - chr8_4:52193057-52193076 Msa1332280:intron 35.0%
TGTCTGTCTTATGAAAGGTA+TGG - chr8_4:52193130-52193149 Msa1332280:intron 35.0%
TACTAGTACTTATGAGCAGT+TGG - chr8_4:52193256-52193275 Msa1332280:intron 35.0%
TGGTAAGTGGGAAAAAAAAC+AGG + chr8_4:52193447-52193466 None:intergenic 35.0%
! GCTTTTAAATGCTTGGTAAG+TGG + chr8_4:52193460-52193479 None:intergenic 35.0%
! CTTCTCAGCTTTTAAATGCT+TGG + chr8_4:52193467-52193486 None:intergenic 35.0%
! CCCTTAACTATAAGCAGTTT+TGG - chr8_4:52193556-52193575 Msa1332280:five_prime_UTR 35.0%
! GGAGCCTACCCATTAATTTT+TGG - chr8_4:52189411-52189430 Msa1332280:three_prime_UTR 40.0%
!! ATCTTGTCTTTTCTCTGGAG+TGG - chr8_4:52189505-52189524 Msa1332280:three_prime_UTR 40.0%
! AGAATTCGAGTTCGACAAGA+TGG + chr8_4:52189592-52189611 None:intergenic 40.0%
CACTTACAGTAACTCGTTTG+GGG + chr8_4:52189664-52189683 None:intergenic 40.0%
CTGCATGATTTAGACAACAG+AGG + chr8_4:52189951-52189970 None:intergenic 40.0%
GCAGCACTATTACTATATGG+TGG - chr8_4:52189983-52190002 Msa1332280:intron 40.0%
!! CGTGTTTGATTTGGTTTGGT+CGG + chr8_4:52190209-52190228 None:intergenic 40.0%
!! GGTTTTGTGTCGAAGTGAAT+GGG - chr8_4:52190284-52190303 Msa1332280:intron 40.0%
ATCTGAGAAATTGTTGACGG+CGG + chr8_4:52190365-52190384 None:intergenic 40.0%
GGGATCTGAGAAATTGTTGA+CGG + chr8_4:52190368-52190387 None:intergenic 40.0%
! TGTTTCTGTTTCGTCACTGA+CGG + chr8_4:52190413-52190432 None:intergenic 40.0%
GAAACAGAAACAGTCACCAA+TGG - chr8_4:52190421-52190440 Msa1332280:intron 40.0%
CGAATATCTAACCATGCCAT+TGG + chr8_4:52190440-52190459 None:intergenic 40.0%
! TTTTGATCCTCTACGGAGAA+TGG - chr8_4:52190495-52190514 Msa1332280:intron 40.0%
GAGAGGAGAATAACGATAAG+TGG + chr8_4:52190621-52190640 None:intergenic 40.0%
TAGGAAGAAGAAGAAAAGCG+AGG + chr8_4:52190643-52190662 None:intergenic 40.0%
AAGTTTCTCTTCTCTTCTGC+AGG - chr8_4:52190689-52190708 Msa1332280:intron 40.0%
!! TCAAAAGGCATTCCAAGTGT+TGG - chr8_4:52191133-52191152 Msa1332280:intron 40.0%
TTCTGTGGAGGTAGATTGAA+AGG - chr8_4:52191167-52191186 Msa1332280:intron 40.0%
AATCTGGATTCTCCTTGATG+AGG - chr8_4:52191225-52191244 Msa1332280:intron 40.0%
ATCTGGATTCTCCTTGATGA+GGG - chr8_4:52191226-52191245 Msa1332280:intron 40.0%
ATAAAGTGCATCCCTCATCA+AGG + chr8_4:52191240-52191259 None:intergenic 40.0%
AACAGGTGAGGAGTTATAAC+GGG - chr8_4:52191267-52191286 Msa1332280:intron 40.0%
! AGGCCAGATGATAGAGATTT+TGG - chr8_4:52191308-52191327 Msa1332280:intron 40.0%
! ATGGGAAGTACACTATACAG+AGG + chr8_4:52191475-52191494 None:intergenic 40.0%
GGGATTTGCCTCAACTAAAA+TGG + chr8_4:52191494-52191513 None:intergenic 40.0%
CCCTGCATATGATTAATGCA+AGG - chr8_4:52191511-52191530 Msa1332280:intron 40.0%
CCTGAAGAGTTCACCAAAAT+AGG + chr8_4:52191649-52191668 None:intergenic 40.0%
!!! CCTATTTTGGTGAACTCTTC+AGG - chr8_4:52191646-52191665 Msa1332280:intron 40.0%
!! TTTGTCGATTCTCTCTGACA+TGG - chr8_4:52191786-52191805 Msa1332280:intron 40.0%
TCACAGCCGCAAAAAACATT+TGG + chr8_4:52191999-52192018 None:intergenic 40.0%
! AATTTGGCTTCTCCTAGATG+AGG - chr8_4:52192048-52192067 Msa1332280:intron 40.0%
! ATTTGGCTTCTCCTAGATGA+GGG - chr8_4:52192049-52192068 Msa1332280:intron 40.0%
CTAAAGTACATCCCTCATCT+AGG + chr8_4:52192063-52192082 None:intergenic 40.0%
AAGGCGAGGAGTTAATAAAC+AGG - chr8_4:52192096-52192115 Msa1332280:intron 40.0%
TAGAAGATAGAGAGCAAGAG+AGG - chr8_4:52192131-52192150 Msa1332280:intron 40.0%
TAGAGAGCAAGAGAGGAATT+TGG - chr8_4:52192138-52192157 Msa1332280:intron 40.0%
CTAGAATCAGAATCTTCTCC+AGG + chr8_4:52192204-52192223 None:intergenic 40.0%
AGTCCAATGTATGGGGTTAT+TGG - chr8_4:52192222-52192241 Msa1332280:intron 40.0%
TCACCAATAACCCCATACAT+TGG + chr8_4:52192228-52192247 None:intergenic 40.0%
AGGAGATCCCAGTAAAATAG+AGG + chr8_4:52192266-52192285 None:intergenic 40.0%
CACTTCAATAGTTCCCATCA+AGG + chr8_4:52192651-52192670 None:intergenic 40.0%
GACAATGATCCACAAAAGCA+TGG + chr8_4:52193114-52193133 None:intergenic 40.0%
! GTATGGTTCTGCTTCTGTAT+TGG - chr8_4:52193147-52193166 Msa1332280:intron 40.0%
TAGTACTTATGAGCAGTTGG+TGG - chr8_4:52193259-52193278 Msa1332280:intron 40.0%
! TTGATACCCCTTGTTTCATG+AGG - chr8_4:52193524-52193543 Msa1332280:five_prime_UTR 40.0%
! TGATACCCCTTGTTTCATGA+GGG - chr8_4:52193525-52193544 Msa1332280:five_prime_UTR 40.0%
AGGATTGCAGAGACTTACGA+TGG + chr8_4:52189378-52189397 None:intergenic 45.0%
AAAAGACAAGATACGCGCAG+AGG + chr8_4:52189497-52189516 None:intergenic 45.0%
! CGCGTATCTTGTCTTTTCTC+TGG - chr8_4:52189500-52189519 Msa1332280:three_prime_UTR 45.0%
! ATTCGAGTTCGACAAGATGG+AGG + chr8_4:52189589-52189608 None:intergenic 45.0%
GAATCAGAGATGAGAGGAGA+TGG + chr8_4:52189615-52189634 None:intergenic 45.0%
GTACAGTTGTAAGTCGACAC+CGG + chr8_4:52189804-52189823 None:intergenic 45.0%
ACAACTGTACGTGTCTGTCT+TGG - chr8_4:52189814-52189833 Msa1332280:CDS 45.0%
GCAATAGAGCATACGTGGTT+AGG + chr8_4:52189859-52189878 None:intergenic 45.0%
AGCTAGCAATAGAGCATACG+TGG + chr8_4:52189864-52189883 None:intergenic 45.0%
!! TGGTTTGGTCGGTCTTTGTA+AGG + chr8_4:52190198-52190217 None:intergenic 45.0%
!! CGGTTTTGTGTCGAAGTGAA+TGG - chr8_4:52190283-52190302 Msa1332280:intron 45.0%
TAAGATTTCGCTCCACCAAC+CGG - chr8_4:52190329-52190348 Msa1332280:intron 45.0%
AGAAACAGTCACCAATGGCA+TGG - chr8_4:52190426-52190445 Msa1332280:intron 45.0%
AGAATGGCAAGATGCACACA+TGG - chr8_4:52190511-52190530 Msa1332280:intron 45.0%
AGAAGAAGAAAAGCGAGGAG+AGG + chr8_4:52190638-52190657 None:intergenic 45.0%
AGCTCTCACAAACCAACACT+TGG + chr8_4:52191148-52191167 None:intergenic 45.0%
!! TTGGTTTGTGAGAGCTTCTG+TGG - chr8_4:52191152-52191171 Msa1332280:intron 45.0%
TTGGAGAGAGATAGAAAGGC+TGG - chr8_4:52191327-52191346 Msa1332280:intron 45.0%
AGAGATAGAAAGGCTGGAGA+GGG - chr8_4:52191333-52191352 Msa1332280:intron 45.0%
AGCTTCAGGTATGCATAGCA+AGG + chr8_4:52191727-52191746 None:intergenic 45.0%
TGCTATGCATACCTGAAGCT+CGG - chr8_4:52191727-52191746 Msa1332280:intron 45.0%
! TCACATTTTACCCGAGCTTC+AGG + chr8_4:52191741-52191760 None:intergenic 45.0%
TGAAGCTCGGGTAAAATGTG+AGG - chr8_4:52191740-52191759 Msa1332280:intron 45.0%
GAAGCTCGGGTAAAATGTGA+GGG - chr8_4:52191741-52191760 Msa1332280:intron 45.0%
AGAGATAAGAAGGCCAGAGA+GGG - chr8_4:52192163-52192182 Msa1332280:intron 45.0%
TGTATGGGGTTATTGGTGAG+AGG - chr8_4:52192229-52192248 Msa1332280:CDS 45.0%
! GAGTAGTTGCAGAGGTTTTC+AGG + chr8_4:52193017-52193036 None:intergenic 45.0%
GTCCCAATGGTGAACGTAAA+TGG + chr8_4:52193062-52193081 None:intergenic 45.0%
! AAAAGCATGGCAGAGACAAC+GGG + chr8_4:52193101-52193120 None:intergenic 45.0%
! CAAAAGCATGGCAGAGACAA+CGG + chr8_4:52193102-52193121 None:intergenic 45.0%
! TTGTCTCTGCCATGCTTTTG+TGG - chr8_4:52193102-52193121 Msa1332280:intron 45.0%
! CTGCTTATAGTTAAGGGCAC+CGG + chr8_4:52193553-52193572 None:intergenic 45.0%
!! TTTATATAAAATATAGAATT+TGG - chr8_4:52192032-52192051 Msa1332280:intron 5.0%
!! TTATATCTTAAATTATAATA+TGG + chr8_4:52193490-52193509 None:intergenic 5.0%
ACGGAGGAATCAGCGAAAGA+GGG + chr8_4:52189334-52189353 None:intergenic 50.0%
AACGGAGGAATCAGCGAAAG+AGG + chr8_4:52189335-52189354 None:intergenic 50.0%
CAGAGACTTACGATGGTGAG+CGG + chr8_4:52189371-52189390 None:intergenic 50.0%
TCTGCAATCCTCTCTCTCAG+TGG - chr8_4:52189387-52189406 Msa1332280:three_prime_UTR 50.0%
! AGTAACTCGTTTGGGGCTTG+TGG + chr8_4:52189657-52189676 None:intergenic 50.0%
TGAGAAATTGTTGACGGCGG+AGG + chr8_4:52190362-52190381 None:intergenic 50.0%
!! GAGAAGTTGGTGGTGGTAGA+GGG + chr8_4:52190388-52190407 None:intergenic 50.0%
TTCTGTTTCGTCACTGACGG+TGG + chr8_4:52190410-52190429 None:intergenic 50.0%
CATCTTGCCATTCTCCGTAG+AGG + chr8_4:52190505-52190524 None:intergenic 50.0%
GTTTGTGAGAGCTTCTGTGG+AGG - chr8_4:52191155-52191174 Msa1332280:intron 50.0%
GAGAGATAGAAAGGCTGGAG+AGG - chr8_4:52191332-52191351 Msa1332280:intron 50.0%
GAGATAGAAAGGCTGGAGAG+GGG - chr8_4:52191334-52191353 Msa1332280:intron 50.0%
GACTGGGGCAATGTTGTTCT+CGG - chr8_4:52191401-52191420 Msa1332280:intron 50.0%
! TTCTCGGTTTTACTGGGACC+AGG - chr8_4:52191417-52191436 Msa1332280:intron 50.0%
! TCTCGGTTTTACTGGGACCA+GGG - chr8_4:52191418-52191437 Msa1332280:intron 50.0%
GCTATGCATACCTGAAGCTC+GGG - chr8_4:52191728-52191747 Msa1332280:intron 50.0%
GAGAGATAAGAAGGCCAGAG+AGG - chr8_4:52192162-52192181 Msa1332280:intron 50.0%
GAGATAAGAAGGCCAGAGAG+GGG - chr8_4:52192164-52192183 Msa1332280:intron 50.0%
CCATGACAGAGTAGTTGCAG+AGG + chr8_4:52193025-52193044 None:intergenic 50.0%
CCTCTGCAACTACTCTGTCA+TGG - chr8_4:52193022-52193041 Msa1332280:intron 50.0%
GCAACTACTCTGTCATGGCA+TGG - chr8_4:52193027-52193046 Msa1332280:intron 50.0%
CGGTACCCTCATGAAACAAG+GGG + chr8_4:52193533-52193552 None:intergenic 50.0%
CCGGTACCCTCATGAAACAA+GGG + chr8_4:52193534-52193553 None:intergenic 50.0%
! CCCTTGTTTCATGAGGGTAC+CGG - chr8_4:52193531-52193550 Msa1332280:five_prime_UTR 50.0%
ACCGGTACCCTCATGAAACA+AGG + chr8_4:52193535-52193554 None:intergenic 50.0%
AGCGGTGGGAAGAACAGCAA+CGG + chr8_4:52189353-52189372 None:intergenic 55.0%
GACTTACGATGGTGAGCGGT+GGG + chr8_4:52189367-52189386 None:intergenic 55.0%
AGACTTACGATGGTGAGCGG+TGG + chr8_4:52189368-52189387 None:intergenic 55.0%
GCAATCCTCTCTCTCAGTGG+CGG - chr8_4:52189390-52189409 Msa1332280:three_prime_UTR 55.0%
CTGGAGTGGCGAACAGAGAA+CGG - chr8_4:52189519-52189538 Msa1332280:three_prime_UTR 55.0%
CGACAAGATGGAGGCTTAGC+CGG + chr8_4:52189580-52189599 None:intergenic 55.0%
GGAGGATACAATCCGGTTGG+TGG + chr8_4:52190344-52190363 None:intergenic 55.0%
TGACGGCGGAGGATACAATC+CGG + chr8_4:52190351-52190370 None:intergenic 55.0%
!! GGAGAAGTTGGTGGTGGTAG+AGG + chr8_4:52190389-52190408 None:intergenic 55.0%
ACTGACGGTGGAGAAGTTGG+TGG + chr8_4:52190398-52190417 None:intergenic 55.0%
GTCACTGACGGTGGAGAAGT+TGG + chr8_4:52190401-52190420 None:intergenic 55.0%
! GCGGCTTCTCTTGTTGCTTC+TGG - chr8_4:52190575-52190594 Msa1332280:intron 55.0%
TAGAAAGGCTGGAGAGGGGT+TGG - chr8_4:52191338-52191357 Msa1332280:intron 55.0%
GAGAGGGGTTGGAGAGGATT+CGG - chr8_4:52191349-52191368 Msa1332280:intron 55.0%
TAACTGGGTAGCAGCTACCC+TGG + chr8_4:52191438-52191457 None:intergenic 55.0%
AGCTCTCTCTAACCCCTCTC+TGG + chr8_4:52192179-52192198 None:intergenic 55.0%
AGTGTTGCGAGTGTGAGACG+TGG - chr8_4:52192522-52192541 Msa1332280:five_prime_UTR 55.0%
! CGAGTGTGAGACGTGGATTG+AGG - chr8_4:52192529-52192548 Msa1332280:five_prime_UTR 55.0%
ACGTTCACCATTGGGACACG+CGG - chr8_4:52193065-52193084 Msa1332280:intron 55.0%
GGTGGGAAGAACAGCAACGG+AGG + chr8_4:52189350-52189369 None:intergenic 60.0%
! TGCTTGACGGTGGGTGATGG+AGG + chr8_4:52189549-52189568 None:intergenic 60.0%
TCGTGCTTGACGGTGGGTGA+TGG + chr8_4:52189552-52189571 None:intergenic 60.0%
GGCGGAGGATACAATCCGGT+TGG + chr8_4:52190347-52190366 None:intergenic 60.0%
!! GACGGTGGAGAAGTTGGTGG+TGG + chr8_4:52190395-52190414 None:intergenic 60.0%
GGGGTTAGAGAGAGCTCTCC+TGG - chr8_4:52192183-52192202 Msa1332280:intron 60.0%
CGTTCACCATTGGGACACGC+GGG - chr8_4:52193066-52193085 Msa1332280:intron 60.0%
ACAGTTCCCGCGTGTCCCAA+TGG + chr8_4:52193075-52193094 None:intergenic 60.0%
AGGCTCCGCCACTGAGAGAG+AGG + chr8_4:52189398-52189417 None:intergenic 65.0%
GTCGCGTCGTGCTTGACGGT+GGG + chr8_4:52189558-52189577 None:intergenic 65.0%
ACCGTCAAGCACGACGCGAC+CGG - chr8_4:52189558-52189577 Msa1332280:three_prime_UTR 65.0%
AGGCTGGAGAGGGGTTGGAG+AGG - chr8_4:52191343-52191362 Msa1332280:intron 65.0%
GGTCGCGTCGTGCTTGACGG+TGG + chr8_4:52189559-52189578 None:intergenic 70.0%
GCCGGTCGCGTCGTGCTTGA+CGG + chr8_4:52189562-52189581 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 52189318 52193620 52189318 ID=Msa1332280;Name=Msa1332280
chr8_4 mRNA 52189318 52193620 52189318 ID=Msa1332280-mRNA-1;Parent=Msa1332280;Name=Msa1332280-mRNA-1;_AED=0.00;_eAED=0.00;_QI=611|1|1|1|0.5|0.33|3|394|177
chr8_4 exon 52189318 52189974 52189318 ID=Msa1332280-mRNA-1:exon:15634;Parent=Msa1332280-mRNA-1
chr8_4 exon 52192228 52192750 52192228 ID=Msa1332280-mRNA-1:exon:15633;Parent=Msa1332280-mRNA-1
chr8_4 exon 52193262 52193620 52193262 ID=Msa1332280-mRNA-1:exon:15632;Parent=Msa1332280-mRNA-1
chr8_4 five_prime_UTR 52193262 52193620 52193262 ID=Msa1332280-mRNA-1:five_prime_utr;Parent=Msa1332280-mRNA-1
chr8_4 five_prime_UTR 52192499 52192750 52192499 ID=Msa1332280-mRNA-1:five_prime_utr;Parent=Msa1332280-mRNA-1
chr8_4 CDS 52192228 52192498 52192228 ID=Msa1332280-mRNA-1:cds;Parent=Msa1332280-mRNA-1
chr8_4 CDS 52189712 52189974 52189712 ID=Msa1332280-mRNA-1:cds;Parent=Msa1332280-mRNA-1
chr8_4 three_prime_UTR 52189318 52189711 52189318 ID=Msa1332280-mRNA-1:three_prime_utr;Parent=Msa1332280-mRNA-1
Gene Sequence

>Msa1332280

ATGGCATGGTTAGATATTCGTTCGCTTCTTACATTATCTGCAATTTTCCGTTTGATTTTGATCCTCTACGGAGAATGGCAAGATGCACACATGGAAGTTCGATACACTGACGTTGATTACATCGTGTTTTCTGATGCGGCTTCTCTTGTTGCTTCTGGTTTTTCTCCTTATCAAAGAACCACTTATCGTTATTCTCCTCTCCTCGCTTTTCTTCTTCTTCCTAATCATTTCATTCATCTCTCTTGGGGAAAGTTTCTCTTCTCTTCTGCAGATATACTTGTGGGATATTTTATCTATTATATTCTAAAGCTGCAGAAGGTTCCTGAAAACCTCTGCAACTACTCTGTCATGGCATGGCTTTTGAATCCATTTACGTTCACCATTGGGACACGCGGGAACTGTGAACCCGTTGTCTCTGCCATGCTTTTGTGGATCATTGTCTGTCTTATGAAAGGTATGGTTCTGCTTCTGTATTGGATTAAATTGATGGTGCTGTTAGCTTGTTATAGCAATGTTCAGTTTCTTGCATTGTAA
Protein sequence

>Msa1332280

MAWLDIRSLLTLSAIFRLILILYGEWQDAHMEVRYTDVDYIVFSDAASLVASGFSPYQRTTYRYSPLLAFLLLPNHFIHLSWGKFLFSSADILVGYFIYYILKLQKVPENLCNYSVMAWLLNPFTFTIGTRGNCEPVVSAMLLWIIVCLMKGMVLLLYWIKLMVLLACYSNVQFLAL*