AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1299820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299820 MtrunA17_Chr8g0353771 90.531 433 15 1 1 407 1 433 0.0 785
Msa1299820 MtrunA17_Chr1g0178021 83.286 353 22 3 91 407 4 355 0.0 570
Msa1299820 MtrunA17_Chr1g0178031 95.890 73 3 0 20 92 4 76 1.64e-43 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1299820 AT5G22130.1 66.514 436 115 3 3 407 15 450 0.0 581
Msa1299820 AT5G22130.3 66.437 435 115 3 4 407 1 435 0.0 577
Msa1299820 AT5G22130.2 63.596 456 115 4 3 407 15 470 0.0 568

Find 152 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAAATCTTATTTCTTTATT+TGG 0.034902 8_3:-61180288 None:intergenic
CCCTTGACATGCTTCAATTT+TGG 0.140491 8_3:+61185220 Msa1299820:three_prime_UTR
ATGGACTTGTTGTCCATTTC+AGG 0.156966 8_3:+61183888 Msa1299820:CDS
TATCATATATATCTTCATTA+TGG 0.159025 8_3:+61184232 Msa1299820:CDS
GGAGTAAAATGAAGCTTAAA+TGG 0.218015 8_3:+61184907 Msa1299820:CDS
GCGGCTTCTCTTGTTGCTTC+TGG 0.249848 8_3:+61180547 Msa1299820:CDS
AACACGACTTTATGTCGTTT+TGG 0.269460 8_3:+61180195 Msa1299820:five_prime_UTR
GTCCCAATGGTGAACGTAAA+TGG 0.291699 8_3:-61183029 None:intergenic
AACTGTTATCTTGGTGAAAC+TGG 0.301430 8_3:+61185274 Msa1299820:three_prime_UTR
GGCCTGTTCTACTGCTTATA+TGG 0.318153 8_3:+61184133 Msa1299820:CDS
ATCATATATATCTTCATTAT+GGG 0.322760 8_3:+61184233 Msa1299820:CDS
TTACTCCATGGGAGTATTAG+AGG 0.330939 8_3:-61184891 None:intergenic
ATCATTTCATTCATCTCTCT+TGG 0.335575 8_3:+61180635 Msa1299820:CDS
ACACTTACAGTAACTCGTTT+GGG 0.347749 8_3:-61179157 None:intergenic
GAAATCTTATTTCTTTATTT+GGG 0.348994 8_3:-61180287 None:intergenic
ACATAAAGTCGTGTTTGATT+TGG 0.350116 8_3:-61180187 None:intergenic
TTACCGCACAATACTTTGTT+TGG 0.354705 8_3:+61184853 Msa1299820:CDS
TTCAAGTTTAGTTACGTGTT+TGG 0.361895 8_3:-61185138 None:intergenic
AACAAGCAATTCCTGTCTTC+GGG 0.365531 8_3:-61184022 None:intergenic
GGGCTACCTTCTTGAGTTCA+AGG 0.370710 8_3:+61184986 Msa1299820:CDS
TCATTTCATTCATCTCTCTT+GGG 0.372099 8_3:+61180636 Msa1299820:CDS
GCCGGTCGCGTCGTGCTTGA+CGG 0.373985 8_3:-61179054 None:intergenic
ATAGGAATAGAATAAATTAT+AGG 0.374447 8_3:-61183917 None:intergenic
GAGAGATGAATGAAATGATT+AGG 0.378291 8_3:-61180631 None:intergenic
GGATCAAGAACCAGGATTAT+AGG 0.393457 8_3:-61183935 None:intergenic
GACTACAACAACTGTTATCT+TGG 0.393717 8_3:+61185265 Msa1299820:three_prime_UTR
TGGTTTGGTCGGTCTTTGTA+AGG 0.396376 8_3:-61180167 None:intergenic
TACACTTACAGTAACTCGTT+TGG 0.409517 8_3:-61179158 None:intergenic
GGAGAAGTTGGTGGTGGTAG+AGG 0.411399 8_3:-61180358 None:intergenic
AAGTTTCTCTTCTCTTCTGC+AGG 0.413221 8_3:+61180661 Msa1299820:CDS
GAGTAAAATGAAGCTTAAAT+GGG 0.414118 8_3:+61184908 Msa1299820:CDS
CTCAAACCCATTGGTTATTG+TGG 0.415086 8_3:+61184964 Msa1299820:CDS
GAACAAGCAATTCCTGTCTT+CGG 0.419995 8_3:-61184023 None:intergenic
CGATAAGTGGTTCTTTGATA+AGG 0.422462 8_3:-61180577 None:intergenic
AGAAACCCGTCCTACGGAAC+TGG 0.423905 8_3:+61183978 Msa1299820:CDS
ACAAGGAACAGGATGATGTT+TGG 0.426211 8_3:+61184076 Msa1299820:CDS
AAGTCGTGTTTGATTTGGTT+TGG 0.427666 8_3:-61180182 None:intergenic
GAATCAGAGATGAGAGGAGA+TGG 0.429173 8_3:-61179107 None:intergenic
TTATAGGATAAATCCTGAAA+TGG 0.429185 8_3:-61183901 None:intergenic
TTAAATGCAGATATACTTGT+GGG 0.429398 8_3:+61182924 Msa1299820:intron
ATGATGTTTGGACTGGTCTC+AGG 0.430771 8_3:+61184088 Msa1299820:CDS
GATCCGAACTTCTTCCCATC+TGG 0.432629 8_3:+61183953 Msa1299820:CDS
GTAATAATCAACTTAGTTCA+AGG 0.433989 8_3:-61178944 None:intergenic
ATCCATTTACGTTCACCATT+GGG 0.436059 8_3:+61183027 Msa1299820:CDS
CGTGTTTGATTTGGTTTGGT+CGG 0.447510 8_3:-61180178 None:intergenic
TTATTCTATTCCTATAATCC+TGG 0.448106 8_3:+61183925 Msa1299820:CDS
TGACCAGATGGGAAGAAGTT+CGG 0.452574 8_3:-61183956 None:intergenic
TCAAACCCATTGGTTATTGT+GGG 0.453182 8_3:+61184965 Msa1299820:CDS
AAAGCTTATTCACAAGGAAC+AGG 0.453748 8_3:+61184065 Msa1299820:CDS
ATCCATATAAGCAGTAGAAC+AGG 0.454270 8_3:-61184135 None:intergenic
TTGGGTTTGTGTTTGATTTG+TGG 0.460261 8_3:+61180214 Msa1299820:five_prime_UTR
AGTAACTCGTTTGGGGCTTG+TGG 0.463636 8_3:-61179149 None:intergenic
AATCCATTTACGTTCACCAT+TGG 0.464929 8_3:+61183026 Msa1299820:CDS
TAAGATTTCGCTCCACCAAC+CGG 0.465136 8_3:+61180301 Msa1299820:five_prime_UTR
GTTTGGACTGGTCTCAGGAT+TGG 0.468223 8_3:+61184093 Msa1299820:CDS
TCGTGCTTGACGGTGGGTGA+TGG 0.481294 8_3:-61179044 None:intergenic
TGTTCTACTGCTTATATGGA+TGG 0.486269 8_3:+61184137 Msa1299820:CDS
ATATATATGATAGAAATAGA+TGG 0.487731 8_3:-61184221 None:intergenic
GACTTACGATGGTGAGCGGT+GGG 0.491214 8_3:-61178859 None:intergenic
GAGAAGTTGGTGGTGGTAGA+GGG 0.492336 8_3:-61180357 None:intergenic
AAAAGCATGGCAGAGACAAC+GGG 0.495574 8_3:-61183068 None:intergenic
TGGGAATGATATTTCAGTTG+TGG 0.496055 8_3:+61184252 Msa1299820:CDS
AACGGAGGAATCAGCGAAAG+AGG 0.497158 8_3:-61178827 None:intergenic
TTTGGAAGGTTAACAATGCA+TGG 0.502229 8_3:+61185238 Msa1299820:three_prime_UTR
GTACTCCAGTTCCGTAGGAC+GGG 0.503315 8_3:-61183983 None:intergenic
CATTTCATTCATCTCTCTTG+GGG 0.504192 8_3:+61180637 Msa1299820:CDS
TAATAATCAACTTAGTTCAA+GGG 0.514796 8_3:-61178943 None:intergenic
CGACAAGATGGAGGCTTAGC+CGG 0.515082 8_3:-61179072 None:intergenic
TGAGAAATTGTTGACGGCGG+AGG 0.520941 8_3:-61180331 None:intergenic
TGTTTCTGTTTCGTCACTGA+CGG 0.522290 8_3:-61180382 None:intergenic
ACCGTCAAGCACGACGCGAC+CGG 0.522683 8_3:+61179053 Msa1299820:five_prime_UTR
GTCACTGACGGTGGAGAAGT+TGG 0.523428 8_3:-61180370 None:intergenic
AGAATTCGAGTTCGACAAGA+TGG 0.523597 8_3:-61179084 None:intergenic
GGTCGCGTCGTGCTTGACGG+TGG 0.524548 8_3:-61179051 None:intergenic
AGAAGGAGAGACCCGAAGAC+AGG 0.525311 8_3:+61184011 Msa1299820:CDS
AGAAGAAGAAAAGCGAGGAG+AGG 0.527124 8_3:-61180607 None:intergenic
CGTAGAGGATCAAAATCAAA+CGG 0.528470 8_3:-61180459 None:intergenic
GTCGCGTCGTGCTTGACGGT+GGG 0.531041 8_3:-61179050 None:intergenic
TCCAAAATTGAAGCATGTCA+AGG 0.537903 8_3:-61185221 None:intergenic
ATTATGTTGACGAATAATCA+TGG 0.538844 8_3:-61185078 None:intergenic
TAAACTTGAATGAGTAACCT+TGG 0.540915 8_3:+61185151 Msa1299820:exon
AGAAGTTCGGATCAAGAACC+AGG 0.541570 8_3:-61183943 None:intergenic
TTTAGTTACGTGTTTGGAGT+GGG 0.541661 8_3:-61185132 None:intergenic
CTTAAATGCAGATATACTTG+TGG 0.542200 8_3:+61182923 Msa1299820:intron
GGCGATACATAGCAATGGTA+AGG 0.542547 8_3:-61185199 None:intergenic
AGAACAGGCCAGTACATATG+AGG 0.545080 8_3:-61184120 None:intergenic
GGATCGGAGCTCAAACCCAT+TGG 0.545225 8_3:+61184955 Msa1299820:CDS
CCAAAATTGAAGCATGTCAA+GGG 0.547162 8_3:-61185220 None:intergenic
GAGAGGAGAATAACGATAAG+TGG 0.552718 8_3:-61180590 None:intergenic
CGAATATCTAACCATGCCAT+TGG 0.556119 8_3:-61180409 None:intergenic
CTGGAGTGGCGAACAGAGAA+CGG 0.559309 8_3:+61179014 Msa1299820:five_prime_UTR
TAGATGGAGAAGTTGTGCCT+TGG 0.560622 8_3:-61184205 None:intergenic
GTTCTACTGCTTATATGGAT+GGG 0.561773 8_3:+61184138 Msa1299820:CDS
AGGACGGGTTTCTGACCAGA+TGG 0.566451 8_3:-61183968 None:intergenic
CAAAAGCATGGCAGAGACAA+CGG 0.567972 8_3:-61183069 None:intergenic
GCAACTACTCTGTCATGGCA+TGG 0.568403 8_3:+61182997 Msa1299820:CDS
GGGATCTGAGAAATTGTTGA+CGG 0.569860 8_3:-61180337 None:intergenic
ATCATTGTCTGTCTTATGAA+AGG 0.570058 8_3:+61183095 Msa1299820:CDS
GTTTAGTTACGTGTTTGGAG+TGG 0.571992 8_3:-61185133 None:intergenic
TTCTGTTTCGTCACTGACGG+TGG 0.577866 8_3:-61180379 None:intergenic
AAAATGAAGCTTAAATGGGG+TGG 0.578593 8_3:+61184912 Msa1299820:CDS
TGCTTGACGGTGGGTGATGG+AGG 0.582716 8_3:-61179041 None:intergenic
CTGGTCAGAAACCCGTCCTA+CGG 0.583333 8_3:+61183972 Msa1299820:CDS
CACTTACAGTAACTCGTTTG+GGG 0.587056 8_3:-61179156 None:intergenic
GTAGCCCCACAATAACCAAT+GGG 0.587492 8_3:-61184970 None:intergenic
GAACAGGATGATGTTTGGAC+TGG 0.587696 8_3:+61184081 Msa1299820:CDS
GGAGGATACAATCCGGTTGG+TGG 0.588718 8_3:-61180313 None:intergenic
TGAAACTCATTCACAGACCA+AGG 0.591648 8_3:-61185168 None:intergenic
GGTAGCCCCACAATAACCAA+TGG 0.593923 8_3:-61184971 None:intergenic
AGTACTCCAGTTCCGTAGGA+CGG 0.594592 8_3:-61183984 None:intergenic
TATTGCCTCTAATACTCCCA+TGG 0.595730 8_3:+61184886 Msa1299820:CDS
AGGCTCCGCCACTGAGAGAG+AGG 0.597299 8_3:-61178890 None:intergenic
GGCTACCTTCTTGAGTTCAA+GGG 0.600400 8_3:+61184987 Msa1299820:CDS
CATGGCAAGGATGAATATGT+TGG 0.603928 8_3:-61185060 None:intergenic
TCTTGAAAAGCTTATTCACA+AGG 0.604641 8_3:+61184059 Msa1299820:CDS
TTATATTCTAAAGCTGCAGA+AGG 0.607717 8_3:+61182959 Msa1299820:CDS
ATCTTACTCGTACAGATCCA+AGG 0.609110 8_3:+61184188 Msa1299820:CDS
GCAATCCTCTCTCTCAGTGG+CGG 0.614418 8_3:+61178885 Msa1299820:five_prime_UTR
ATTCGAGTTCGACAAGATGG+AGG 0.618123 8_3:-61179081 None:intergenic
AGCGGTGGGAAGAACAGCAA+CGG 0.619355 8_3:-61178845 None:intergenic
GGCGGAGGATACAATCCGGT+TGG 0.619391 8_3:-61180316 None:intergenic
AGACTTACGATGGTGAGCGG+TGG 0.619894 8_3:-61178860 None:intergenic
GAAAAGTACTCCAGTTCCGT+AGG 0.620724 8_3:-61183988 None:intergenic
GACAATGATCCACAAAAGCA+TGG 0.620845 8_3:-61183081 None:intergenic
CCTCTGCAACTACTCTGTCA+TGG 0.622108 8_3:+61182992 Msa1299820:CDS
ACGGAGGAATCAGCGAAAGA+GGG 0.626210 8_3:-61178826 None:intergenic
CATCTTGCCATTCTCCGTAG+AGG 0.629060 8_3:-61180474 None:intergenic
TAGGAAGAAGAAGAAAAGCG+AGG 0.632584 8_3:-61180612 None:intergenic
ACGTTCACCATTGGGACACG+CGG 0.637349 8_3:+61183035 Msa1299820:CDS
AGTAAAATGAAGCTTAAATG+GGG 0.638242 8_3:+61184909 Msa1299820:CDS
GGACGGGTTTCTGACCAGAT+GGG 0.638285 8_3:-61183967 None:intergenic
AGAATGGCAAGATGCACACA+TGG 0.640505 8_3:+61180483 Msa1299820:CDS
AATGAAGAATCAGAGATGAG+AGG 0.641074 8_3:-61179113 None:intergenic
GACGGTGGAGAAGTTGGTGG+TGG 0.641322 8_3:-61180364 None:intergenic
AGAAACAGTCACCAATGGCA+TGG 0.643233 8_3:+61180398 Msa1299820:exon
CAAACCCATTGGTTATTGTG+GGG 0.643939 8_3:+61184966 Msa1299820:CDS
GATACAGTAGCGCCTCATGT+AGG 0.648328 8_3:-61184165 None:intergenic
TGACGGCGGAGGATACAATC+CGG 0.648478 8_3:-61180320 None:intergenic
CCATGACAGAGTAGTTGCAG+AGG 0.655039 8_3:-61182992 None:intergenic
CAGAGACTTACGATGGTGAG+CGG 0.656906 8_3:-61178863 None:intergenic
ATCTGAGAAATTGTTGACGG+CGG 0.660707 8_3:-61180334 None:intergenic
GTTGACGAATAATCATGGCA+AGG 0.661270 8_3:-61185073 None:intergenic
GAAACAGAAACAGTCACCAA+TGG 0.663051 8_3:+61180393 Msa1299820:exon
TCTGCAATCCTCTCTCTCAG+TGG 0.666572 8_3:+61178882 Msa1299820:five_prime_UTR
AAAAGACAAGATACGCGCAG+AGG 0.671827 8_3:-61178989 None:intergenic
TCAAGGGCGATACATAGCAA+TGG 0.674434 8_3:-61185204 None:intergenic
CGTTCACCATTGGGACACGC+GGG 0.676034 8_3:+61183036 Msa1299820:CDS
ACTGACGGTGGAGAAGTTGG+TGG 0.676459 8_3:-61180367 None:intergenic
GGTGGGAAGAACAGCAACGG+AGG 0.676969 8_3:-61178842 None:intergenic
TGGATGGGAATTCCTACATG+AGG 0.677531 8_3:+61184153 Msa1299820:CDS
GAACCAAACAAAGTATTGTG+CGG 0.682686 8_3:-61184856 None:intergenic
AGGATTGCAGAGACTTACGA+TGG 0.726760 8_3:-61178870 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATAAAAATAAATTAA+GGG - chr8_3:61185355-61185374 None:intergenic 0.0%
!! AAAAATATAAAAATAAATTA+AGG - chr8_3:61185356-61185375 None:intergenic 0.0%
!!! CAATTTTTATAACATATATT+TGG - chr8_3:61179900-61179919 None:intergenic 10.0%
!!! AAAAAAAATAGATTTTATGT+AGG - chr8_3:61181656-61181675 None:intergenic 10.0%
!!! AATTTAAGATATAATATAAG+AGG + chr8_3:61183466-61183485 Msa1299820:intron 10.0%
!! TACAAAATCAATAATTAAAA+AGG - chr8_3:61184423-61184442 None:intergenic 10.0%
!! TTGAATAAGATAATAAATAA+GGG + chr8_3:61184548-61184567 Msa1299820:intron 10.0%
!! AGTAATTTCCAAAAATTAAT+GGG - chr8_3:61178917-61178936 None:intergenic 15.0%
!! TAGTAATTTCCAAAAATTAA+TGG - chr8_3:61178918-61178937 None:intergenic 15.0%
!! TATAACAAAATTATAGCATT+GGG - chr8_3:61179513-61179532 None:intergenic 15.0%
!! TTATAACAAAATTATAGCAT+TGG - chr8_3:61179514-61179533 None:intergenic 15.0%
!!! GAAATCTTATTTCTTTATTT+GGG - chr8_3:61180290-61180309 None:intergenic 15.0%
!!! GTATATTTTGTTGTAAAAAT+AGG + chr8_3:61181812-61181831 Msa1299820:intron 15.0%
!!! CTTTTTCTTTTTCTTTATTT+TGG - chr8_3:61182424-61182443 None:intergenic 15.0%
!!! AAGAATGTAAAATCTATTTT+TGG - chr8_3:61183299-61183318 None:intergenic 15.0%
!! TTGTAAAAAATACTGAAAAA+TGG - chr8_3:61183363-61183382 None:intergenic 15.0%
!! AATATACTTATTTCATATAC+TGG - chr8_3:61183591-61183610 None:intergenic 15.0%
!! ATAGGAATAGAATAAATTAT+AGG - chr8_3:61183920-61183939 None:intergenic 15.0%
!! ATATATATGATAGAAATAGA+TGG - chr8_3:61184224-61184243 None:intergenic 15.0%
!! TATCATATATATCTTCATTA+TGG + chr8_3:61184232-61184251 Msa1299820:CDS 15.0%
!! ATCATATATATCTTCATTAT+GGG + chr8_3:61184233-61184252 Msa1299820:CDS 15.0%
!! AATCAATAATTAAAAAGGAA+TGG - chr8_3:61184418-61184437 None:intergenic 15.0%
!! TATTTGCAATAAATAGTTAA+GGG - chr8_3:61184518-61184537 None:intergenic 15.0%
!! GTTGAATAAGATAATAAATA+AGG + chr8_3:61184547-61184566 Msa1299820:intron 15.0%
!!! ATAATAAATAAGGGTATTAT+AGG + chr8_3:61184557-61184576 Msa1299820:intron 15.0%
!! TAATAATCAACTTAGTTCAA+GGG - chr8_3:61178946-61178965 None:intergenic 20.0%
!!! CAAAAAAAAGTTGTTATTAC+CGG + chr8_3:61179269-61179288 Msa1299820:intron 20.0%
!! AAACCAATAATCACAATTTA+GGG - chr8_3:61179756-61179775 None:intergenic 20.0%
!! AAAACCAATAATCACAATTT+AGG - chr8_3:61179757-61179776 None:intergenic 20.0%
!!! TTTGATTTGTGGTTTTTTAT+TGG + chr8_3:61180225-61180244 Msa1299820:five_prime_UTR 20.0%
!!! CGAAATCTTATTTCTTTATT+TGG - chr8_3:61180291-61180310 None:intergenic 20.0%
!!! CTTATTTTTGAAAACTCTTT+AGG + chr8_3:61180790-61180809 Msa1299820:intron 20.0%
!!! CTTTAGAGAAAGAAAAAAAA+AGG + chr8_3:61182047-61182066 Msa1299820:intron 20.0%
!! GCATTAATTAATCATATACA+AGG - chr8_3:61182331-61182350 None:intergenic 20.0%
!!! TGTTTTTATTTTACCTTGAT+GGG + chr8_3:61182605-61182624 Msa1299820:intron 20.0%
!!! AAAACTGTTTTCATTATTTC+TGG - chr8_3:61182694-61182713 None:intergenic 20.0%
!! TAAGTATATTGTTTGAGTAA+AGG + chr8_3:61183601-61183620 Msa1299820:intron 20.0%
!! AAGTATATTGTTTGAGTAAA+GGG + chr8_3:61183602-61183621 Msa1299820:intron 20.0%
!!! TTTTTTTTTCCTTCAGTAAA+AGG + chr8_3:61183758-61183777 Msa1299820:intron 20.0%
!! CTATTTGCAATAAATAGTTA+AGG - chr8_3:61184519-61184538 None:intergenic 20.0%
!! ATGAAAATATGTAGCAATAT+TGG - chr8_3:61184647-61184666 None:intergenic 20.0%
!!! TGTTGATTAACTAGATTTAA+AGG - chr8_3:61184766-61184785 None:intergenic 20.0%
!! ATTTCCAAAAATTAATGGGT+AGG - chr8_3:61178913-61178932 None:intergenic 25.0%
! GTAATAATCAACTTAGTTCA+AGG - chr8_3:61178947-61178966 None:intergenic 25.0%
! TTGTATTCGGATTTGAATAA+GGG - chr8_3:61179463-61179482 None:intergenic 25.0%
! TTTGTATTCGGATTTGAATA+AGG - chr8_3:61179464-61179483 None:intergenic 25.0%
!!! TTTTGTTTGCACTTTGTATT+CGG - chr8_3:61179476-61179495 None:intergenic 25.0%
! ATCAAACTATTATTGTGTAG+CGG + chr8_3:61179572-61179591 Msa1299820:intron 25.0%
! ATTGCTTGTTTATGATTTGA+GGG + chr8_3:61179655-61179674 Msa1299820:intron 25.0%
! AATCCCTAAATTGTGATTAT+TGG + chr8_3:61179750-61179769 Msa1299820:intron 25.0%
!!! TATTGGTTTTGAATTGATGA+AGG + chr8_3:61179767-61179786 Msa1299820:intron 25.0%
!!! ATTGGTTTTGAATTGATGAA+GGG + chr8_3:61179768-61179787 Msa1299820:intron 25.0%
!! TAATTAATGCTCAAGTTGTT+AGG + chr8_3:61179806-61179825 Msa1299820:intron 25.0%
!! AATTAATGCTCAAGTTGTTA+GGG + chr8_3:61179807-61179826 Msa1299820:intron 25.0%
! ATTTGGACAACATAACATAA+TGG - chr8_3:61179883-61179902 None:intergenic 25.0%
! TCAAAAAAGAAGTTATATCG+TGG - chr8_3:61180012-61180031 None:intergenic 25.0%
!!! TCTTTTTTGATAAAACTGTG+TGG + chr8_3:61180022-61180041 Msa1299820:intron 25.0%
! AATAGTGTGATAAAAGAACT+TGG + chr8_3:61180046-61180065 Msa1299820:intron 25.0%
!!! TTTGTGGTTTTTTATTGGTT+TGG + chr8_3:61180230-61180249 Msa1299820:five_prime_UTR 25.0%
! ACTTATTGAAAAAAGCTAAG+AGG - chr8_3:61180722-61180741 None:intergenic 25.0%
! GTAGAAATAGCTTATACATA+AGG + chr8_3:61180870-61180889 Msa1299820:intron 25.0%
! CGATTAAATTGGTTATCAAA+AGG + chr8_3:61181090-61181109 Msa1299820:intron 25.0%
! TGTATGTTATGTATAGAATC+TGG + chr8_3:61181181-61181200 Msa1299820:intron 25.0%
! GGATTCAAGATCAATTTAAT+AGG + chr8_3:61181342-61181361 Msa1299820:intron 25.0%
! TTTAATAGGTTATTTGTGAC+TGG + chr8_3:61181356-61181375 Msa1299820:intron 25.0%
! TTAATAGGTTATTTGTGACT+GGG + chr8_3:61181357-61181376 Msa1299820:intron 25.0%
!!! AAGTTGTTTTTAGCCTATTT+TGG + chr8_3:61181605-61181624 Msa1299820:intron 25.0%
!! ATTAAGTTGTATATCCAAAC+TGG + chr8_3:61181882-61181901 Msa1299820:intron 25.0%
! TTGAGCACTTAATGAATAAT+TGG - chr8_3:61181922-61181941 None:intergenic 25.0%
! AAAAACATTTGGATTGCATT+TGG - chr8_3:61181958-61181977 None:intergenic 25.0%
! ATATAACTAGATAGCATCTA+AGG - chr8_3:61182256-61182275 None:intergenic 25.0%
!! AATTAATGCATACCCATTTT+TGG + chr8_3:61182342-61182361 Msa1299820:intron 25.0%
! CTATAAAAGGTGAAATTGAT+CGG - chr8_3:61182370-61182389 None:intergenic 25.0%
! TCTTATCTCAGAACTATAAA+AGG - chr8_3:61182383-61182402 None:intergenic 25.0%
! TTGTAACTTTGACTATAAGA+TGG - chr8_3:61182465-61182484 None:intergenic 25.0%
!!! GTGTTTTTATTTTACCTTGA+TGG + chr8_3:61182604-61182623 Msa1299820:intron 25.0%
!!! GTTTTCATTATTTCTGGAAA+TGG - chr8_3:61182688-61182707 None:intergenic 25.0%
! TGAATGATTATATGCATTTC+CGG - chr8_3:61182736-61182755 None:intergenic 25.0%
! CTTAGCAACACAATAATAAA+GGG - chr8_3:61182846-61182865 None:intergenic 25.0%
! GAAACAATAAACATTTGCTT+AGG - chr8_3:61182904-61182923 None:intergenic 25.0%
! TTAAATGCAGATATACTTGT+GGG + chr8_3:61182924-61182943 Msa1299820:intron 25.0%
! TCTGTATTGGATTAAATTGA+TGG + chr8_3:61183130-61183149 Msa1299820:intron 25.0%
!! ATAAGTACTAGTACATTTTC+AGG - chr8_3:61183219-61183238 None:intergenic 25.0%
!! TGGAAAGATGAAAGTTATTT+TGG - chr8_3:61183343-61183362 None:intergenic 25.0%
! TTTGGTATCCTTAAAGAAAA+AGG + chr8_3:61183544-61183563 Msa1299820:intron 25.0%
! ATATACTGGAAAGTTTATCT+TGG - chr8_3:61183577-61183596 None:intergenic 25.0%
! AGTATATTGTTTGAGTAAAG+GGG + chr8_3:61183603-61183622 Msa1299820:intron 25.0%
! CAAACTTAATCTTCTCAAAT+TGG - chr8_3:61183681-61183700 None:intergenic 25.0%
! AAGACTAACAATCAAATGAA+AGG - chr8_3:61183706-61183725 None:intergenic 25.0%
!!! ATTTGATTGTTAGTCTTGTT+TGG + chr8_3:61183709-61183728 Msa1299820:intron 25.0%
! TTATAGGATAAATCCTGAAA+TGG - chr8_3:61183904-61183923 None:intergenic 25.0%
! TTATTCTATTCCTATAATCC+TGG + chr8_3:61183925-61183944 Msa1299820:CDS 25.0%
!!! AGCTTTTCAAGAAATTAAGT+GGG - chr8_3:61184051-61184070 None:intergenic 25.0%
!!! AAGCTTTTCAAGAAATTAAG+TGG - chr8_3:61184052-61184071 None:intergenic 25.0%
! TACTTAACAAACCTTATTGA+AGG - chr8_3:61184386-61184405 None:intergenic 25.0%
! CAATAATTAAAAAGGAATGG+AGG - chr8_3:61184415-61184434 None:intergenic 25.0%
!!! CTTTAAAACGACAACTAAAT+AGG - chr8_3:61184459-61184478 None:intergenic 25.0%
!! AACTAGACTGTAACTTTTTA+TGG - chr8_3:61184599-61184618 None:intergenic 25.0%
! ATATTTGAGCAGAAATGTAT+TGG + chr8_3:61184795-61184814 Msa1299820:intron 25.0%
! GAGTAAAATGAAGCTTAAAT+GGG + chr8_3:61184908-61184927 Msa1299820:CDS 25.0%
! AGTAAAATGAAGCTTAAATG+GGG + chr8_3:61184909-61184928 Msa1299820:CDS 25.0%
! ATTATGTTGACGAATAATCA+TGG - chr8_3:61185081-61185100 None:intergenic 25.0%
TACTTGTCAGATAAAGTAGT+TGG - chr8_3:61179418-61179437 None:intergenic 30.0%
GAATAAGGGATTGTAATACA+TGG - chr8_3:61179449-61179468 None:intergenic 30.0%
AAGTGCAAACAAAACAAACA+TGG + chr8_3:61179482-61179501 Msa1299820:intron 30.0%
CATTGCTTGTTTATGATTTG+AGG + chr8_3:61179654-61179673 Msa1299820:intron 30.0%
CTTATCACTAAAGAATAGTG+TGG + chr8_3:61180074-61180093 Msa1299820:intron 30.0%
CGATATAATTTCTTTGTCGT+AGG + chr8_3:61180133-61180152 Msa1299820:intron 30.0%
ACATAAAGTCGTGTTTGATT+TGG - chr8_3:61180190-61180209 None:intergenic 30.0%
!!! GGTTTTTTATTGGTTTGGTT+CGG + chr8_3:61180235-61180254 Msa1299820:five_prime_UTR 30.0%
GAGAGATGAATGAAATGATT+AGG - chr8_3:61180634-61180653 None:intergenic 30.0%
ATCATTTCATTCATCTCTCT+TGG + chr8_3:61180635-61180654 Msa1299820:CDS 30.0%
TCATTTCATTCATCTCTCTT+GGG + chr8_3:61180636-61180655 Msa1299820:CDS 30.0%
!! GTATAAGCTATGGTCATTTT+TGG - chr8_3:61180955-61180974 None:intergenic 30.0%
AAGTCGTTATGTATAAGCTA+TGG - chr8_3:61180965-61180984 None:intergenic 30.0%
CATTAAGCGTTCGATTAAAT+TGG + chr8_3:61181079-61181098 Msa1299820:intron 30.0%
!! TAACGGGTTATTAGGAAATT+AGG + chr8_3:61181255-61181274 Msa1299820:intron 30.0%
TAATAGGTTATTTGTGACTG+GGG + chr8_3:61181358-61181377 Msa1299820:intron 30.0%
! GAAAGAGCATAGTTATAACT+GGG - chr8_3:61181425-61181444 None:intergenic 30.0%
ACAACTTATAGACATGACAT+AGG - chr8_3:61181592-61181611 None:intergenic 30.0%
AACAACAGCTATTACGTAAT+TGG - chr8_3:61181783-61181802 None:intergenic 30.0%
TATAGCATGATCATTTGTCA+TGG - chr8_3:61181854-61181873 None:intergenic 30.0%
CATTAAGTGCTCAATTAATC+TGG + chr8_3:61181928-61181947 Msa1299820:intron 30.0%
!!! TGCAATCCAAATGTTTTTTG+CGG + chr8_3:61181960-61181979 Msa1299820:intron 30.0%
! ATTGATGTCCTCTATTTTAC+TGG + chr8_3:61182225-61182244 Msa1299820:intron 30.0%
! TTGATGTCCTCTATTTTACT+GGG + chr8_3:61182226-61182245 Msa1299820:intron 30.0%
! CTAAAATTACTCCCCATTTT+AGG + chr8_3:61182295-61182314 Msa1299820:intron 30.0%
AATTGATCGGAACCAAAAAT+GGG - chr8_3:61182357-61182376 None:intergenic 30.0%
AAATTGATCGGAACCAAAAA+TGG - chr8_3:61182358-61182377 None:intergenic 30.0%
! GATTGAGGAATTTCTGTTTT+GGG + chr8_3:61182514-61182533 Msa1299820:intron 30.0%
! TCCCTCTGCAATAAATTTTA+GGG + chr8_3:61182558-61182577 Msa1299820:intron 30.0%
ACCCTAAAATTTATTGCAGA+GGG - chr8_3:61182562-61182581 None:intergenic 30.0%
ATTGAAGTGAATCATTGTGA+TGG + chr8_3:61182632-61182651 Msa1299820:intron 30.0%
! TACGTTTTCACAAAGTAAAC+AGG + chr8_3:61182820-61182839 Msa1299820:intron 30.0%
GCTTAGCAACACAATAATAA+AGG - chr8_3:61182847-61182866 None:intergenic 30.0%
TAAGCAATGAATATGCTGAA+TGG + chr8_3:61182862-61182881 Msa1299820:intron 30.0%
CTTAAATGCAGATATACTTG+TGG + chr8_3:61182923-61182942 Msa1299820:intron 30.0%
!! TTATATTCTAAAGCTGCAGA+AGG + chr8_3:61182959-61182978 Msa1299820:CDS 30.0%
ATCATTGTCTGTCTTATGAA+AGG + chr8_3:61183095-61183114 Msa1299820:CDS 30.0%
! CATAACATTTCAGTTTTCAG+TGG - chr8_3:61183393-61183412 None:intergenic 30.0%
! CTTTTAAATGCTTGGTAAGT+GGG - chr8_3:61183429-61183448 None:intergenic 30.0%
CCAAAACTGCTTATAGTTAA+GGG - chr8_3:61183529-61183548 None:intergenic 30.0%
ACCAAAACTGCTTATAGTTA+AGG - chr8_3:61183530-61183549 None:intergenic 30.0%
! GTATCGTTCCTTTTTCTTTA+AGG - chr8_3:61183555-61183574 None:intergenic 30.0%
AAAACTGAGAGAGAAGTAAA+AGG - chr8_3:61183641-61183660 None:intergenic 30.0%
! CATTTTACACCTTTTACTGA+AGG - chr8_3:61183770-61183789 None:intergenic 30.0%
! ATGTGTTACAATCAGCTTTT+TGG + chr8_3:61183864-61183883 Msa1299820:CDS 30.0%
!! TTACAATCAGCTTTTTGGTA+TGG + chr8_3:61183869-61183888 Msa1299820:CDS 30.0%
!! GCTTTTCAAGAAATTAAGTG+GGG - chr8_3:61184050-61184069 None:intergenic 30.0%
TCTTGAAAAGCTTATTCACA+AGG + chr8_3:61184059-61184078 Msa1299820:CDS 30.0%
!!! TTCTGATTTTTAGCTTTGCA+CGG + chr8_3:61184317-61184336 Msa1299820:intron 30.0%
TACATTTCTGCTCAAATATG+AGG - chr8_3:61184794-61184813 None:intergenic 30.0%
! TAAGCTTCATTTTACTCCAT+GGG - chr8_3:61184905-61184924 None:intergenic 30.0%
! TTAAGCTTCATTTTACTCCA+TGG - chr8_3:61184906-61184925 None:intergenic 30.0%
GGAGTAAAATGAAGCTTAAA+TGG + chr8_3:61184907-61184926 Msa1299820:CDS 30.0%
! AAAATGTCTTTTTACAGCTC+TGG + chr8_3:61185012-61185031 Msa1299820:CDS 30.0%
! AAATGTCTTTTTACAGCTCT+GGG + chr8_3:61185013-61185032 Msa1299820:CDS 30.0%
! TTCAAGTTTAGTTACGTGTT+TGG - chr8_3:61185141-61185160 None:intergenic 30.0%
TAAACTTGAATGAGTAACCT+TGG + chr8_3:61185151-61185170 Msa1299820:exon 30.0%
AATGAAGAATCAGAGATGAG+AGG - chr8_3:61179116-61179135 None:intergenic 35.0%
ACACTTACAGTAACTCGTTT+GGG - chr8_3:61179160-61179179 None:intergenic 35.0%
TACACTTACAGTAACTCGTT+TGG - chr8_3:61179161-61179180 None:intergenic 35.0%
AACGAATATGTCTTCACAGA+TGG - chr8_3:61179195-61179214 None:intergenic 35.0%
!! TTTTCTTGTTTCAACTCCTG+AGG - chr8_3:61179370-61179389 None:intergenic 35.0%
TTGTTTAATAGCAGCTACAG+CGG + chr8_3:61179540-61179559 Msa1299820:intron 35.0%
!! CGACAGCATTGGTTATAAAT+AGG + chr8_3:61179631-61179650 Msa1299820:intron 35.0%
AGAGAAAAACAACCACACAA+AGG - chr8_3:61179684-61179703 None:intergenic 35.0%
CAACATAACATAATGGCACA+AGG - chr8_3:61179876-61179895 None:intergenic 35.0%
TCTGCAGCACTATTACTATA+TGG + chr8_3:61179952-61179971 Msa1299820:intron 35.0%
! CACTATTACTATATGGTGGA+TGG + chr8_3:61179959-61179978 Msa1299820:intron 35.0%
AAAGAATAGTGTGGCAAAAC+TGG + chr8_3:61180083-61180102 Msa1299820:intron 35.0%
AAGAATAGTGTGGCAAAACT+GGG + chr8_3:61180084-61180103 Msa1299820:intron 35.0%
GCAAAACTGGGATAAAACTA+TGG + chr8_3:61180096-61180115 Msa1299820:intron 35.0%
ACTGGGATAAAACTATGGAA+TGG + chr8_3:61180101-61180120 Msa1299820:intron 35.0%
!! AAGTCGTGTTTGATTTGGTT+TGG - chr8_3:61180185-61180204 None:intergenic 35.0%
!! AACACGACTTTATGTCGTTT+TGG + chr8_3:61180195-61180214 Msa1299820:five_prime_UTR 35.0%
!!! ACACGACTTTATGTCGTTTT+GGG + chr8_3:61180196-61180215 Msa1299820:five_prime_UTR 35.0%
!! TTGGGTTTGTGTTTGATTTG+TGG + chr8_3:61180214-61180233 Msa1299820:five_prime_UTR 35.0%
CGTAGAGGATCAAAATCAAA+CGG - chr8_3:61180462-61180481 None:intergenic 35.0%
!! CGTTTGATTTTGATCCTCTA+CGG + chr8_3:61180460-61180479 Msa1299820:CDS 35.0%
! TTACATCGTGTTTTCTGATG+CGG + chr8_3:61180528-61180547 Msa1299820:CDS 35.0%
CGATAAGTGGTTCTTTGATA+AGG - chr8_3:61180580-61180599 None:intergenic 35.0%
CATTTCATTCATCTCTCTTG+GGG + chr8_3:61180637-61180656 Msa1299820:CDS 35.0%
GTATAAGCTATGGTCATGTT+TGG - chr8_3:61181033-61181052 None:intergenic 35.0%
ATGACCATAGCTTATACGTA+AGG + chr8_3:61181036-61181055 Msa1299820:intron 35.0%
ATGACCTTACGTATAAGCTA+TGG - chr8_3:61181043-61181062 None:intergenic 35.0%
TCGAACGCTTAATGAGTAAT+CGG - chr8_3:61181073-61181092 None:intergenic 35.0%
! GTAGATTGAAAGGTTTTCTG+TGG + chr8_3:61181149-61181168 Msa1299820:intron 35.0%
TGCACTTTATAGAGCAAAAC+AGG + chr8_3:61181222-61181241 Msa1299820:intron 35.0%
TTTATAGAGCAAAACAGGTG+AGG + chr8_3:61181227-61181246 Msa1299820:intron 35.0%
AAACAGGTGAGGAGTTATAA+CGG + chr8_3:61181238-61181257 Msa1299820:intron 35.0%
!! AGGAGTTATAACGGGTTATT+AGG + chr8_3:61181247-61181266 Msa1299820:intron 35.0%
GGTTATTAGGAAATTAGGAG+AGG + chr8_3:61181260-61181279 Msa1299820:intron 35.0%
TCTCCAAAATCTCTATCATC+TGG - chr8_3:61181286-61181305 None:intergenic 35.0%
!! GATTTTGGAGAGAGATAGAA+AGG + chr8_3:61181295-61181314 Msa1299820:intron 35.0%
! AATGTTGTTCTCGGTTTTAC+TGG + chr8_3:61181382-61181401 Msa1299820:intron 35.0%
! ATGTTGTTCTCGGTTTTACT+GGG + chr8_3:61181383-61181402 Msa1299820:intron 35.0%
! GGAAAGAGCATAGTTATAAC+TGG - chr8_3:61181426-61181445 None:intergenic 35.0%
!!! TGTACTTCCCATTTTAGTTG+AGG + chr8_3:61181455-61181474 Msa1299820:intron 35.0%
GGATTTGCCTCAACTAAAAT+GGG - chr8_3:61181465-61181484 None:intergenic 35.0%
CCTTGCATTAATCATATGCA+GGG - chr8_3:61181486-61181505 None:intergenic 35.0%
TCCTTGCATTAATCATATGC+AGG - chr8_3:61181487-61181506 None:intergenic 35.0%
AGATTGTTTGACAGAGCTTA+AGG + chr8_3:61181560-61181579 Msa1299820:intron 35.0%
TAAAATGTGAGGGTTGTGTT+AGG + chr8_3:61181721-61181740 Msa1299820:intron 35.0%
! GAATCGACAAAATTTTGTCG+AGG - chr8_3:61181747-61181766 None:intergenic 35.0%
TTGTCACATAAGATCCAGTT+TGG - chr8_3:61181899-61181918 None:intergenic 35.0%
GAGAAAGAAAAAAAAAGGCG+AGG + chr8_3:61182052-61182071 Msa1299820:intron 35.0%
GAATTTGGAGAGAGATAAGA+AGG + chr8_3:61182123-61182142 Msa1299820:intron 35.0%
TCTGATTCTAGTCCAATGTA+TGG + chr8_3:61182183-61182202 Msa1299820:intron 35.0%
CTGATTCTAGTCCAATGTAT+GGG + chr8_3:61182184-61182203 Msa1299820:intron 35.0%
TGATTCTAGTCCAATGTATG+GGG + chr8_3:61182185-61182204 Msa1299820:intron 35.0%
GATTTGTCTCACCTAAAATG+GGG - chr8_3:61182309-61182328 None:intergenic 35.0%
GGATTTGTCTCACCTAAAAT+GGG - chr8_3:61182310-61182329 None:intergenic 35.0%
AGGATTTGTCTCACCTAAAA+TGG - chr8_3:61182311-61182330 None:intergenic 35.0%
! GGATTGAGGAATTTCTGTTT+TGG + chr8_3:61182513-61182532 Msa1299820:intron 35.0%
TTTATTGCAGAGGGACAAAA+TGG - chr8_3:61182553-61182572 None:intergenic 35.0%
! GTCCCTCTGCAATAAATTTT+AGG + chr8_3:61182557-61182576 Msa1299820:intron 35.0%
GACCCTAAAATTTATTGCAG+AGG - chr8_3:61182563-61182582 None:intergenic 35.0%
TTTGACATGTTCATCGTTTC+CGG + chr8_3:61182714-61182733 Msa1299820:intron 35.0%
AATCCATTTACGTTCACCAT+TGG + chr8_3:61183026-61183045 Msa1299820:CDS 35.0%
ATCCATTTACGTTCACCATT+GGG + chr8_3:61183027-61183046 Msa1299820:CDS 35.0%
TGTCTGTCTTATGAAAGGTA+TGG + chr8_3:61183100-61183119 Msa1299820:intron 35.0%
TACTAGTACTTATGAGCAGT+TGG + chr8_3:61183226-61183245 Msa1299820:intron 35.0%
TGGTAAGTGGGAAAAAAAAC+AGG - chr8_3:61183417-61183436 None:intergenic 35.0%
! GCTTTTAAATGCTTGGTAAG+TGG - chr8_3:61183430-61183449 None:intergenic 35.0%
! CTTCTCAGCTTTTAAATGCT+TGG - chr8_3:61183437-61183456 None:intergenic 35.0%
! CCCTTAACTATAAGCAGTTT+TGG + chr8_3:61183526-61183545 Msa1299820:intron 35.0%
AGGGGAATAAGAAGGAAAAA+GGG - chr8_3:61183831-61183850 None:intergenic 35.0%
AAGGGGAATAAGAAGGAAAA+AGG - chr8_3:61183832-61183851 None:intergenic 35.0%
! TTTTTCCTTCTTATTCCCCT+TGG + chr8_3:61183831-61183850 Msa1299820:intron 35.0%
AAAGCTTATTCACAAGGAAC+AGG + chr8_3:61184065-61184084 Msa1299820:CDS 35.0%
!! TTGGTTTTCCTCATATGTAC+TGG + chr8_3:61184112-61184131 Msa1299820:CDS 35.0%
ATCCATATAAGCAGTAGAAC+AGG - chr8_3:61184138-61184157 None:intergenic 35.0%
TGTTCTACTGCTTATATGGA+TGG + chr8_3:61184137-61184156 Msa1299820:CDS 35.0%
GTTCTACTGCTTATATGGAT+GGG + chr8_3:61184138-61184157 Msa1299820:CDS 35.0%
TGGGAATGATATTTCAGTTG+TGG + chr8_3:61184252-61184271 Msa1299820:CDS 35.0%
AACCAAAAACTGTGGCAAAA+AGG - chr8_3:61184290-61184309 None:intergenic 35.0%
!!! TCTGATTTTTAGCTTTGCAC+GGG + chr8_3:61184318-61184337 Msa1299820:intron 35.0%
ATGATACAGTCTGCACAAAT+AGG - chr8_3:61184357-61184376 None:intergenic 35.0%
ATCATTTGTGGCCTTCAATA+AGG + chr8_3:61184372-61184391 Msa1299820:intron 35.0%
CACACACACACATATACATA+TGG + chr8_3:61184733-61184752 Msa1299820:intron 35.0%
CACACATATACATATGGCAA+CGG + chr8_3:61184739-61184758 Msa1299820:intron 35.0%
TTACCGCACAATACTTTGTT+TGG + chr8_3:61184853-61184872 Msa1299820:CDS 35.0%
!! GAACCAAACAAAGTATTGTG+CGG - chr8_3:61184859-61184878 None:intergenic 35.0%
AAAATGAAGCTTAAATGGGG+TGG + chr8_3:61184912-61184931 Msa1299820:CDS 35.0%
! GATTGTCTTGCATTCTTTTG+TGG + chr8_3:61184934-61184953 Msa1299820:CDS 35.0%
! TCTTGCATTCTTTTGTGGAT+CGG + chr8_3:61184939-61184958 Msa1299820:CDS 35.0%
! TCAAACCCATTGGTTATTGT+GGG + chr8_3:61184965-61184984 Msa1299820:CDS 35.0%
! TTTTACCCTTGAACTCAAGA+AGG - chr8_3:61184995-61185014 None:intergenic 35.0%
! TTTAGTTACGTGTTTGGAGT+GGG - chr8_3:61185135-61185154 None:intergenic 35.0%
CCAAAATTGAAGCATGTCAA+GGG - chr8_3:61185223-61185242 None:intergenic 35.0%
TCCAAAATTGAAGCATGTCA+AGG - chr8_3:61185224-61185243 None:intergenic 35.0%
! TGACATGCTTCAATTTTGGA+AGG + chr8_3:61185224-61185243 Msa1299820:three_prime_UTR 35.0%
TTTGGAAGGTTAACAATGCA+TGG + chr8_3:61185238-61185257 Msa1299820:three_prime_UTR 35.0%
GACTACAACAACTGTTATCT+TGG + chr8_3:61185265-61185284 Msa1299820:three_prime_UTR 35.0%
AACTGTTATCTTGGTGAAAC+TGG + chr8_3:61185274-61185293 Msa1299820:three_prime_UTR 35.0%
! GGAGCCTACCCATTAATTTT+TGG + chr8_3:61178906-61178925 Msa1299820:five_prime_UTR 40.0%
!! ATCTTGTCTTTTCTCTGGAG+TGG + chr8_3:61179000-61179019 Msa1299820:five_prime_UTR 40.0%
! AGAATTCGAGTTCGACAAGA+TGG - chr8_3:61179087-61179106 None:intergenic 40.0%
CACTTACAGTAACTCGTTTG+GGG - chr8_3:61179159-61179178 None:intergenic 40.0%
AAGACACTCTCTATGTGGTT+AGG - chr8_3:61179346-61179365 None:intergenic 40.0%
! ATAACCAATGCTGTCGATTG+TGG - chr8_3:61179627-61179646 None:intergenic 40.0%
ATTTGAGGGTTACCTTTGTG+TGG + chr8_3:61179669-61179688 Msa1299820:intron 40.0%
CTGCATGATTTAGACAACAG+AGG - chr8_3:61179923-61179942 None:intergenic 40.0%
GCAGCACTATTACTATATGG+TGG + chr8_3:61179955-61179974 Msa1299820:intron 40.0%
!! CGTGTTTGATTTGGTTTGGT+CGG - chr8_3:61180181-61180200 None:intergenic 40.0%
!! GGTTTTGTGTCGAAGTGAAT+GGG + chr8_3:61180256-61180275 Msa1299820:five_prime_UTR 40.0%
ATCTGAGAAATTGTTGACGG+CGG - chr8_3:61180337-61180356 None:intergenic 40.0%
GGGATCTGAGAAATTGTTGA+CGG - chr8_3:61180340-61180359 None:intergenic 40.0%
! TGTTTCTGTTTCGTCACTGA+CGG - chr8_3:61180385-61180404 None:intergenic 40.0%
GAAACAGAAACAGTCACCAA+TGG + chr8_3:61180393-61180412 Msa1299820:exon 40.0%
CGAATATCTAACCATGCCAT+TGG - chr8_3:61180412-61180431 None:intergenic 40.0%
! TTTTGATCCTCTACGGAGAA+TGG + chr8_3:61180467-61180486 Msa1299820:CDS 40.0%
GAGAGGAGAATAACGATAAG+TGG - chr8_3:61180593-61180612 None:intergenic 40.0%
TAGGAAGAAGAAGAAAAGCG+AGG - chr8_3:61180615-61180634 None:intergenic 40.0%
AAGTTTCTCTTCTCTTCTGC+AGG + chr8_3:61180661-61180680 Msa1299820:CDS 40.0%
!! TCAAAAGGCATTCCAAGTGT+TGG + chr8_3:61181105-61181124 Msa1299820:intron 40.0%
TTCTGTGGAGGTAGATTGAA+AGG + chr8_3:61181139-61181158 Msa1299820:intron 40.0%
AATCTGGATTCTCCTTGATG+AGG + chr8_3:61181197-61181216 Msa1299820:intron 40.0%
ATCTGGATTCTCCTTGATGA+GGG + chr8_3:61181198-61181217 Msa1299820:intron 40.0%
ATAAAGTGCATCCCTCATCA+AGG - chr8_3:61181212-61181231 None:intergenic 40.0%
AACAGGTGAGGAGTTATAAC+GGG + chr8_3:61181239-61181258 Msa1299820:intron 40.0%
! AGGCCAGATGATAGAGATTT+TGG + chr8_3:61181280-61181299 Msa1299820:intron 40.0%
! ATGGGAAGTACACTATACAG+AGG - chr8_3:61181447-61181466 None:intergenic 40.0%
GGGATTTGCCTCAACTAAAA+TGG - chr8_3:61181466-61181485 None:intergenic 40.0%
CCCTGCATATGATTAATGCA+AGG + chr8_3:61181483-61181502 Msa1299820:intron 40.0%
CCTGAAGAGTTCACCAAAAT+AGG - chr8_3:61181621-61181640 None:intergenic 40.0%
!!! CCTATTTTGGTGAACTCTTC+AGG + chr8_3:61181618-61181637 Msa1299820:intron 40.0%
!! TTTGTCGATTCTCTCTGACA+TGG + chr8_3:61181756-61181775 Msa1299820:intron 40.0%
TCACAGCCGCAAAAAACATT+TGG - chr8_3:61181969-61181988 None:intergenic 40.0%
! AATTTGGCTTCTCCTAGATG+AGG + chr8_3:61182018-61182037 Msa1299820:intron 40.0%
! ATTTGGCTTCTCCTAGATGA+GGG + chr8_3:61182019-61182038 Msa1299820:intron 40.0%
CTAAAGTACATCCCTCATCT+AGG - chr8_3:61182033-61182052 None:intergenic 40.0%
AAGGCGAGGAGTTAATAAAC+AGG + chr8_3:61182066-61182085 Msa1299820:intron 40.0%
TAGAAGATAGAGAGCAAGAG+AGG + chr8_3:61182101-61182120 Msa1299820:intron 40.0%
TAGAGAGCAAGAGAGGAATT+TGG + chr8_3:61182108-61182127 Msa1299820:intron 40.0%
CTAGAATCAGAATCTTCTCC+AGG - chr8_3:61182174-61182193 None:intergenic 40.0%
AGTCCAATGTATGGGGTTAT+TGG + chr8_3:61182192-61182211 Msa1299820:intron 40.0%
TCACCAATAACCCCATACAT+TGG - chr8_3:61182198-61182217 None:intergenic 40.0%
AGGAGATCCCAGTAAAATAG+AGG - chr8_3:61182236-61182255 None:intergenic 40.0%
CACTTCAATAGTTCCCATCA+AGG - chr8_3:61182621-61182640 None:intergenic 40.0%
GACAATGATCCACAAAAGCA+TGG - chr8_3:61183084-61183103 None:intergenic 40.0%
! GTATGGTTCTGCTTCTGTAT+TGG + chr8_3:61183117-61183136 Msa1299820:intron 40.0%
TAGTACTTATGAGCAGTTGG+TGG + chr8_3:61183229-61183248 Msa1299820:intron 40.0%
! TTGATACCCCTTGTTTCATG+AGG + chr8_3:61183494-61183513 Msa1299820:intron 40.0%
! TGATACCCCTTGTTTCATGA+GGG + chr8_3:61183495-61183514 Msa1299820:intron 40.0%
TTGGTTGACACAGCAAAGAA+AGG + chr8_3:61183728-61183747 Msa1299820:intron 40.0%
GGGAATAAGAAGGAAAAAGG+GGG - chr8_3:61183829-61183848 None:intergenic 40.0%
GGGGAATAAGAAGGAAAAAG+GGG - chr8_3:61183830-61183849 None:intergenic 40.0%
ACACATTACCTGCAAACCAA+GGG - chr8_3:61183850-61183869 None:intergenic 40.0%
AACACATTACCTGCAAACCA+AGG - chr8_3:61183851-61183870 None:intergenic 40.0%
!! ATGGACTTGTTGTCCATTTC+AGG + chr8_3:61183888-61183907 Msa1299820:CDS 40.0%
GGATCAAGAACCAGGATTAT+AGG - chr8_3:61183938-61183957 None:intergenic 40.0%
!! GAACTGGAGTACTTTTCAGA+AGG + chr8_3:61183994-61184013 Msa1299820:CDS 40.0%
AACAAGCAATTCCTGTCTTC+GGG - chr8_3:61184025-61184044 None:intergenic 40.0%
GAACAAGCAATTCCTGTCTT+CGG - chr8_3:61184026-61184045 None:intergenic 40.0%
ACAAGGAACAGGATGATGTT+TGG + chr8_3:61184076-61184095 Msa1299820:CDS 40.0%
ATCTTACTCGTACAGATCCA+AGG + chr8_3:61184188-61184207 Msa1299820:CDS 40.0%
! CTCCTTTTTGCCACAGTTTT+TGG + chr8_3:61184285-61184304 Msa1299820:CDS 40.0%
ACAAGCTGAACCAAAAACTG+TGG - chr8_3:61184298-61184317 None:intergenic 40.0%
GTCTGCACAAATAGGCAAAA+TGG - chr8_3:61184349-61184368 None:intergenic 40.0%
TGTGCAGACTGTATCATTTG+TGG + chr8_3:61184360-61184379 Msa1299820:intron 40.0%
ATAAACAGAGATCAGATGCG+TGG - chr8_3:61184822-61184841 None:intergenic 40.0%
CTGATCTCTGTTTATCTTGC+AGG + chr8_3:61184827-61184846 Msa1299820:intron 40.0%
TATTGCCTCTAATACTCCCA+TGG + chr8_3:61184886-61184905 Msa1299820:CDS 40.0%
!! TTACTCCATGGGAGTATTAG+AGG - chr8_3:61184894-61184913 None:intergenic 40.0%
! CTCAAACCCATTGGTTATTG+TGG + chr8_3:61184964-61184983 Msa1299820:CDS 40.0%
! CAAACCCATTGGTTATTGTG+GGG + chr8_3:61184966-61184985 Msa1299820:CDS 40.0%
CATGGCAAGGATGAATATGT+TGG - chr8_3:61185063-61185082 None:intergenic 40.0%
GTTGACGAATAATCATGGCA+AGG - chr8_3:61185076-61185095 None:intergenic 40.0%
GTTTAGTTACGTGTTTGGAG+TGG - chr8_3:61185136-61185155 None:intergenic 40.0%
TGAAACTCATTCACAGACCA+AGG - chr8_3:61185171-61185190 None:intergenic 40.0%
! CCCTTGACATGCTTCAATTT+TGG + chr8_3:61185220-61185239 Msa1299820:three_prime_UTR 40.0%
AGGATTGCAGAGACTTACGA+TGG - chr8_3:61178873-61178892 None:intergenic 45.0%
AAAAGACAAGATACGCGCAG+AGG - chr8_3:61178992-61179011 None:intergenic 45.0%
! CGCGTATCTTGTCTTTTCTC+TGG + chr8_3:61178995-61179014 Msa1299820:five_prime_UTR 45.0%
! ATTCGAGTTCGACAAGATGG+AGG - chr8_3:61179084-61179103 None:intergenic 45.0%
GAATCAGAGATGAGAGGAGA+TGG - chr8_3:61179110-61179129 None:intergenic 45.0%
GTACAGTTGTAAGTCGACAC+CGG - chr8_3:61179291-61179310 None:intergenic 45.0%
ACAACTGTACGTGTCTGTCT+TGG + chr8_3:61179301-61179320 Msa1299820:intron 45.0%
GAGGTAAGACACTCTCTATG+TGG - chr8_3:61179351-61179370 None:intergenic 45.0%
!! CATAGAGAGTGTCTTACCTC+AGG + chr8_3:61179351-61179370 Msa1299820:intron 45.0%
! ATGCTGTCGATTGTGGATAG+CGG - chr8_3:61179620-61179639 None:intergenic 45.0%
CTATCCACAATCGACAGCAT+TGG + chr8_3:61179620-61179639 Msa1299820:intron 45.0%
! TTGAGAGCACGATGGGTTTA+GGG - chr8_3:61179731-61179750 None:intergenic 45.0%
! TTTGAGAGCACGATGGGTTT+AGG - chr8_3:61179732-61179751 None:intergenic 45.0%
! TAGGGATTTGAGAGCACGAT+GGG - chr8_3:61179738-61179757 None:intergenic 45.0%
! TTAGGGATTTGAGAGCACGA+TGG - chr8_3:61179739-61179758 None:intergenic 45.0%
!! TGGTTTGGTCGGTCTTTGTA+AGG - chr8_3:61180170-61180189 None:intergenic 45.0%
!! CGGTTTTGTGTCGAAGTGAA+TGG + chr8_3:61180255-61180274 Msa1299820:five_prime_UTR 45.0%
TAAGATTTCGCTCCACCAAC+CGG + chr8_3:61180301-61180320 Msa1299820:five_prime_UTR 45.0%
AGAAACAGTCACCAATGGCA+TGG + chr8_3:61180398-61180417 Msa1299820:exon 45.0%
AGAATGGCAAGATGCACACA+TGG + chr8_3:61180483-61180502 Msa1299820:CDS 45.0%
AGAAGAAGAAAAGCGAGGAG+AGG - chr8_3:61180610-61180629 None:intergenic 45.0%
AGCTCTCACAAACCAACACT+TGG - chr8_3:61181120-61181139 None:intergenic 45.0%
!! TTGGTTTGTGAGAGCTTCTG+TGG + chr8_3:61181124-61181143 Msa1299820:intron 45.0%
TTGGAGAGAGATAGAAAGGC+TGG + chr8_3:61181299-61181318 Msa1299820:intron 45.0%
AGAGATAGAAAGGCTGGAGA+GGG + chr8_3:61181305-61181324 Msa1299820:intron 45.0%
AGCTTCAGGTATGCATAGCA+AGG - chr8_3:61181697-61181716 None:intergenic 45.0%
TGCTATGCATACCTGAAGCT+CGG + chr8_3:61181697-61181716 Msa1299820:intron 45.0%
! TCACATTTTACCCGAGCTTC+AGG - chr8_3:61181711-61181730 None:intergenic 45.0%
TGAAGCTCGGGTAAAATGTG+AGG + chr8_3:61181710-61181729 Msa1299820:intron 45.0%
GAAGCTCGGGTAAAATGTGA+GGG + chr8_3:61181711-61181730 Msa1299820:intron 45.0%
AGAGATAAGAAGGCCAGAGA+GGG + chr8_3:61182133-61182152 Msa1299820:intron 45.0%
TGTATGGGGTTATTGGTGAG+AGG + chr8_3:61182199-61182218 Msa1299820:intron 45.0%
! GAGTAGTTGCAGAGGTTTTC+AGG - chr8_3:61182987-61183006 None:intergenic 45.0%
GTCCCAATGGTGAACGTAAA+TGG - chr8_3:61183032-61183051 None:intergenic 45.0%
! AAAAGCATGGCAGAGACAAC+GGG - chr8_3:61183071-61183090 None:intergenic 45.0%
! CAAAAGCATGGCAGAGACAA+CGG - chr8_3:61183072-61183091 None:intergenic 45.0%
! TTGTCTCTGCCATGCTTTTG+TGG + chr8_3:61183072-61183091 Msa1299820:CDS 45.0%
! CTGCTTATAGTTAAGGGCAC+CGG - chr8_3:61183523-61183542 None:intergenic 45.0%
GCAAACCAAGGGGAATAAGA+AGG - chr8_3:61183839-61183858 None:intergenic 45.0%
!! TCTTATTCCCCTTGGTTTGC+AGG + chr8_3:61183839-61183858 Msa1299820:intron 45.0%
CACATTACCTGCAAACCAAG+GGG - chr8_3:61183849-61183868 None:intergenic 45.0%
AGAAGTTCGGATCAAGAACC+AGG - chr8_3:61183946-61183965 None:intergenic 45.0%
TGACCAGATGGGAAGAAGTT+CGG - chr8_3:61183959-61183978 None:intergenic 45.0%
!! GAAAAGTACTCCAGTTCCGT+AGG - chr8_3:61183991-61184010 None:intergenic 45.0%
GAACAGGATGATGTTTGGAC+TGG + chr8_3:61184081-61184100 Msa1299820:CDS 45.0%
!! ATGATGTTTGGACTGGTCTC+AGG + chr8_3:61184088-61184107 Msa1299820:CDS 45.0%
AGAACAGGCCAGTACATATG+AGG - chr8_3:61184123-61184142 None:intergenic 45.0%
GGCCTGTTCTACTGCTTATA+TGG + chr8_3:61184133-61184152 Msa1299820:CDS 45.0%
TGGATGGGAATTCCTACATG+AGG + chr8_3:61184153-61184172 Msa1299820:CDS 45.0%
TAGATGGAGAAGTTGTGCCT+TGG - chr8_3:61184208-61184227 None:intergenic 45.0%
GTAGCCCCACAATAACCAAT+GGG - chr8_3:61184973-61184992 None:intergenic 45.0%
GGCTACCTTCTTGAGTTCAA+GGG + chr8_3:61184987-61185006 Msa1299820:CDS 45.0%
GGCGATACATAGCAATGGTA+AGG - chr8_3:61185202-61185221 None:intergenic 45.0%
TCAAGGGCGATACATAGCAA+TGG - chr8_3:61185207-61185226 None:intergenic 45.0%
!! TTTATATAAAATATAGAATT+TGG + chr8_3:61182002-61182021 Msa1299820:intron 5.0%
!! TTATATCTTAAATTATAATA+TGG - chr8_3:61183460-61183479 None:intergenic 5.0%
ACGGAGGAATCAGCGAAAGA+GGG - chr8_3:61178829-61178848 None:intergenic 50.0%
AACGGAGGAATCAGCGAAAG+AGG - chr8_3:61178830-61178849 None:intergenic 50.0%
CAGAGACTTACGATGGTGAG+CGG - chr8_3:61178866-61178885 None:intergenic 50.0%
TCTGCAATCCTCTCTCTCAG+TGG + chr8_3:61178882-61178901 Msa1299820:five_prime_UTR 50.0%
! AGTAACTCGTTTGGGGCTTG+TGG - chr8_3:61179152-61179171 None:intergenic 50.0%
TGAGAAATTGTTGACGGCGG+AGG - chr8_3:61180334-61180353 None:intergenic 50.0%
!! GAGAAGTTGGTGGTGGTAGA+GGG - chr8_3:61180360-61180379 None:intergenic 50.0%
TTCTGTTTCGTCACTGACGG+TGG - chr8_3:61180382-61180401 None:intergenic 50.0%
CATCTTGCCATTCTCCGTAG+AGG - chr8_3:61180477-61180496 None:intergenic 50.0%
GTTTGTGAGAGCTTCTGTGG+AGG + chr8_3:61181127-61181146 Msa1299820:intron 50.0%
GAGAGATAGAAAGGCTGGAG+AGG + chr8_3:61181304-61181323 Msa1299820:intron 50.0%
GAGATAGAAAGGCTGGAGAG+GGG + chr8_3:61181306-61181325 Msa1299820:intron 50.0%
GACTGGGGCAATGTTGTTCT+CGG + chr8_3:61181373-61181392 Msa1299820:intron 50.0%
! TTCTCGGTTTTACTGGGACC+AGG + chr8_3:61181389-61181408 Msa1299820:intron 50.0%
! TCTCGGTTTTACTGGGACCA+GGG + chr8_3:61181390-61181409 Msa1299820:intron 50.0%
GCTATGCATACCTGAAGCTC+GGG + chr8_3:61181698-61181717 Msa1299820:intron 50.0%
GAGAGATAAGAAGGCCAGAG+AGG + chr8_3:61182132-61182151 Msa1299820:intron 50.0%
GAGATAAGAAGGCCAGAGAG+GGG + chr8_3:61182134-61182153 Msa1299820:intron 50.0%
CCATGACAGAGTAGTTGCAG+AGG - chr8_3:61182995-61183014 None:intergenic 50.0%
CCTCTGCAACTACTCTGTCA+TGG + chr8_3:61182992-61183011 Msa1299820:CDS 50.0%
GCAACTACTCTGTCATGGCA+TGG + chr8_3:61182997-61183016 Msa1299820:CDS 50.0%
CGGTACCCTCATGAAACAAG+GGG - chr8_3:61183503-61183522 None:intergenic 50.0%
CCGGTACCCTCATGAAACAA+GGG - chr8_3:61183504-61183523 None:intergenic 50.0%
! CCCTTGTTTCATGAGGGTAC+CGG + chr8_3:61183501-61183520 Msa1299820:intron 50.0%
ACCGGTACCCTCATGAAACA+AGG - chr8_3:61183505-61183524 None:intergenic 50.0%
GATCCGAACTTCTTCCCATC+TGG + chr8_3:61183953-61183972 Msa1299820:CDS 50.0%
AGTACTCCAGTTCCGTAGGA+CGG - chr8_3:61183987-61184006 None:intergenic 50.0%
!! GTTTGGACTGGTCTCAGGAT+TGG + chr8_3:61184093-61184112 Msa1299820:CDS 50.0%
GATACAGTAGCGCCTCATGT+AGG - chr8_3:61184168-61184187 None:intergenic 50.0%
GGTAGCCCCACAATAACCAA+TGG - chr8_3:61184974-61184993 None:intergenic 50.0%
GGGCTACCTTCTTGAGTTCA+AGG + chr8_3:61184986-61185005 Msa1299820:CDS 50.0%
AGCGGTGGGAAGAACAGCAA+CGG - chr8_3:61178848-61178867 None:intergenic 55.0%
GACTTACGATGGTGAGCGGT+GGG - chr8_3:61178862-61178881 None:intergenic 55.0%
AGACTTACGATGGTGAGCGG+TGG - chr8_3:61178863-61178882 None:intergenic 55.0%
GCAATCCTCTCTCTCAGTGG+CGG + chr8_3:61178885-61178904 Msa1299820:five_prime_UTR 55.0%
CTGGAGTGGCGAACAGAGAA+CGG + chr8_3:61179014-61179033 Msa1299820:five_prime_UTR 55.0%
CGACAAGATGGAGGCTTAGC+CGG - chr8_3:61179075-61179094 None:intergenic 55.0%
GGAGGATACAATCCGGTTGG+TGG - chr8_3:61180316-61180335 None:intergenic 55.0%
TGACGGCGGAGGATACAATC+CGG - chr8_3:61180323-61180342 None:intergenic 55.0%
!! GGAGAAGTTGGTGGTGGTAG+AGG - chr8_3:61180361-61180380 None:intergenic 55.0%
ACTGACGGTGGAGAAGTTGG+TGG - chr8_3:61180370-61180389 None:intergenic 55.0%
GTCACTGACGGTGGAGAAGT+TGG - chr8_3:61180373-61180392 None:intergenic 55.0%
! GCGGCTTCTCTTGTTGCTTC+TGG + chr8_3:61180547-61180566 Msa1299820:CDS 55.0%
TAGAAAGGCTGGAGAGGGGT+TGG + chr8_3:61181310-61181329 Msa1299820:intron 55.0%
GAGAGGGGTTGGAGAGGATT+CGG + chr8_3:61181321-61181340 Msa1299820:intron 55.0%
TAACTGGGTAGCAGCTACCC+TGG - chr8_3:61181410-61181429 None:intergenic 55.0%
AGCTCTCTCTAACCCCTCTC+TGG - chr8_3:61182149-61182168 None:intergenic 55.0%
AGTGTTGCGAGTGTGAGACG+TGG + chr8_3:61182492-61182511 Msa1299820:intron 55.0%
! CGAGTGTGAGACGTGGATTG+AGG + chr8_3:61182499-61182518 Msa1299820:intron 55.0%
ACGTTCACCATTGGGACACG+CGG + chr8_3:61183035-61183054 Msa1299820:CDS 55.0%
! GGACGGGTTTCTGACCAGAT+GGG - chr8_3:61183970-61183989 None:intergenic 55.0%
! AGGACGGGTTTCTGACCAGA+TGG - chr8_3:61183971-61183990 None:intergenic 55.0%
CTGGTCAGAAACCCGTCCTA+CGG + chr8_3:61183972-61183991 Msa1299820:CDS 55.0%
AGAAACCCGTCCTACGGAAC+TGG + chr8_3:61183978-61183997 Msa1299820:CDS 55.0%
GTACTCCAGTTCCGTAGGAC+GGG - chr8_3:61183986-61184005 None:intergenic 55.0%
AGAAGGAGAGACCCGAAGAC+AGG + chr8_3:61184011-61184030 Msa1299820:CDS 55.0%
GGATCGGAGCTCAAACCCAT+TGG + chr8_3:61184955-61184974 Msa1299820:CDS 55.0%
GGTGGGAAGAACAGCAACGG+AGG - chr8_3:61178845-61178864 None:intergenic 60.0%
! TGCTTGACGGTGGGTGATGG+AGG - chr8_3:61179044-61179063 None:intergenic 60.0%
TCGTGCTTGACGGTGGGTGA+TGG - chr8_3:61179047-61179066 None:intergenic 60.0%
GGCGGAGGATACAATCCGGT+TGG - chr8_3:61180319-61180338 None:intergenic 60.0%
!! GACGGTGGAGAAGTTGGTGG+TGG - chr8_3:61180367-61180386 None:intergenic 60.0%
GGGGTTAGAGAGAGCTCTCC+TGG + chr8_3:61182153-61182172 Msa1299820:intron 60.0%
CGTTCACCATTGGGACACGC+GGG + chr8_3:61183036-61183055 Msa1299820:CDS 60.0%
ACAGTTCCCGCGTGTCCCAA+TGG - chr8_3:61183045-61183064 None:intergenic 60.0%
AGGCTCCGCCACTGAGAGAG+AGG - chr8_3:61178893-61178912 None:intergenic 65.0%
GTCGCGTCGTGCTTGACGGT+GGG - chr8_3:61179053-61179072 None:intergenic 65.0%
ACCGTCAAGCACGACGCGAC+CGG + chr8_3:61179053-61179072 Msa1299820:five_prime_UTR 65.0%
AGGCTGGAGAGGGGTTGGAG+AGG + chr8_3:61181315-61181334 Msa1299820:intron 65.0%
GGTCGCGTCGTGCTTGACGG+TGG - chr8_3:61179054-61179073 None:intergenic 70.0%
GCCGGTCGCGTCGTGCTTGA+CGG - chr8_3:61179057-61179076 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 61178813 61185534 61178813 ID=Msa1299820;Name=Msa1299820
chr8_3 mRNA 61178813 61185534 61178813 ID=Msa1299820-mRNA-1;Parent=Msa1299820;Name=Msa1299820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=611|0.75|0.8|1|0.75|0.6|5|371|407
chr8_3 exon 61178813 61179171 61178813 ID=Msa1299820-mRNA-1:exon:17980;Parent=Msa1299820-mRNA-1
chr8_3 exon 61180160 61180682 61180160 ID=Msa1299820-mRNA-1:exon:17981;Parent=Msa1299820-mRNA-1
chr8_3 exon 61182934 61183116 61182934 ID=Msa1299820-mRNA-1:exon:17982;Parent=Msa1299820-mRNA-1
chr8_3 exon 61183861 61184315 61183861 ID=Msa1299820-mRNA-1:exon:17983;Parent=Msa1299820-mRNA-1
chr8_3 exon 61184849 61185534 61184849 ID=Msa1299820-mRNA-1:exon:17984;Parent=Msa1299820-mRNA-1
chr8_3 five_prime_UTR 61178813 61179171 61178813 ID=Msa1299820-mRNA-1:five_prime_utr;Parent=Msa1299820-mRNA-1
chr8_3 five_prime_UTR 61180160 61180411 61180160 ID=Msa1299820-mRNA-1:five_prime_utr;Parent=Msa1299820-mRNA-1
chr8_3 CDS 61180412 61180682 61180412 ID=Msa1299820-mRNA-1:cds;Parent=Msa1299820-mRNA-1
chr8_3 CDS 61182934 61183116 61182934 ID=Msa1299820-mRNA-1:cds;Parent=Msa1299820-mRNA-1
chr8_3 CDS 61183861 61184315 61183861 ID=Msa1299820-mRNA-1:cds;Parent=Msa1299820-mRNA-1
chr8_3 CDS 61184849 61185163 61184849 ID=Msa1299820-mRNA-1:cds;Parent=Msa1299820-mRNA-1
chr8_3 three_prime_UTR 61185164 61185534 61185164 ID=Msa1299820-mRNA-1:three_prime_utr;Parent=Msa1299820-mRNA-1
Gene Sequence

>Msa1299820

ATGGCATGGTTAGATATTCGTTCGCTTCTTACATTATCTGCAATTTTCCGTTTGATTTTGATCCTCTACGGAGAATGGCAAGATGCACACATGGAAGTTCGATACACTGACGTTGATTACATCGTGTTTTCTGATGCGGCTTCTCTTGTTGCTTCTGGTTTTTCTCCTTATCAAAGAACCACTTATCGTTATTCTCCTCTCCTCGCTTTTCTTCTTCTTCCTAATCATTTCATTCATCTCTCTTGGGGAAAGTTTCTCTTCTCTTCTGCAGATATACTTGTGGGATATTTTATCTATTATATTCTAAAGCTGCAGAAGGTTCCTGAAAACCTCTGCAACTACTCTGTCATGGCATGGCTTTTGAATCCATTTACGTTCACCATTGGGACACGCGGGAACTGTGAACCCGTTGTCTCTGCCATGCTTTTGTGGATCATTGTCTGTCTTATGAAAGGTAATGTGTTACAATCAGCTTTTTGGTATGGACTTGTTGTCCATTTCAGGATTTATCCTATAATTTATTCTATTCCTATAATCCTGGTTCTTGATCCGAACTTCTTCCCATCTGGTCAGAAACCCGTCCTACGGAACTGGAGTACTTTTCAGAAGGAGAGACCCGAAGACAGGAATTGCTTGTTCACCCCACTTAATTTCTTGAAAAGCTTATTCACAAGGAACAGGATGATGTTTGGACTGGTCTCAGGATTGGTTTTCCTCATATGTACTGGCCTGTTCTACTGCTTATATGGATGGGAATTCCTACATGAGGCGCTACTGTATCATCTTACTCGTACAGATCCAAGGCACAACTTCTCCATCTATTTCTATCATATATATCTTCATTATGGGAATGATATTTCAGTTGTGGAAAAGCTTGTCTCCTTTTTGCCACAGTTTTTGGTTCAGCTTGTGATTACCGCACAATACTTTGTTTGGTTCTTCTGCTTATTGCCTCTAATACTCCCATGGAGTAAAATGAAGCTTAAATGGGGTGGATTGTCTTGCATTCTTTTGTGGATCGGAGCTCAAACCCATTGGTTATTGTGGGGCTACCTTCTTGAGTTCAAGGGTAAAAATGTCTTTTTACAGCTCTGGGCAGCAAGCTTACTGTTTCTTGCAGCCAACATATTCATCCTTGCCATGATTATTCGTCAACATAATTGTTCTTCTGTTTTCAAAGCTTTAGAGAATACCCACTCCAAACACGTAACTAAACTTGAATGA
Protein sequence

>Msa1299820

MAWLDIRSLLTLSAIFRLILILYGEWQDAHMEVRYTDVDYIVFSDAASLVASGFSPYQRTTYRYSPLLAFLLLPNHFIHLSWGKFLFSSADILVGYFIYYILKLQKVPENLCNYSVMAWLLNPFTFTIGTRGNCEPVVSAMLLWIIVCLMKGNVLQSAFWYGLVVHFRIYPIIYSIPIILVLDPNFFPSGQKPVLRNWSTFQKERPEDRNCLFTPLNFLKSLFTRNRMMFGLVSGLVFLICTGLFYCLYGWEFLHEALLYHLTRTDPRHNFSIYFYHIYLHYGNDISVVEKLVSFLPQFLVQLVITAQYFVWFFCLLPLILPWSKMKLKWGGLSCILLWIGAQTHWLLWGYLLEFKGKNVFLQLWAASLLFLAANIFILAMIIRQHNCSSVFKALENTHSKHVTKLE*