AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1444740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1444740 MtrunA17_Chr4g0041021 95.550 382 17 0 1 382 1 382 0.0 746
Msa1444740 MtrunA17_Chr2g0325491 43.152 387 176 7 11 382 4 361 1.88e-84 261
Msa1444740 MtrunA17_Chr8g0360531 52.459 61 29 0 2 62 1 61 5.09e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1444740 AT2G31130.6 59.459 74 24 1 4 77 1 68 2.80e-20 92.0
Msa1444740 AT2G31130.3 59.459 74 24 1 4 77 1 68 2.80e-20 92.0
Msa1444740 AT2G31130.1 59.459 74 24 1 4 77 1 68 2.80e-20 92.0
Msa1444740 AT2G31130.4 59.459 74 24 1 4 77 1 68 2.80e-20 92.0
Msa1444740 AT2G31130.2 59.459 74 24 1 4 77 1 68 2.80e-20 92.0
Msa1444740 AT2G31130.5 59.459 74 24 1 4 77 1 68 2.80e-20 92.0

Find 105 sgRNAs with CRISPR-Local

Find 518 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATCTTTCCATGAAATTT+TGG 0.133339 tig0030819:+15423 None:intergenic
TTATGCCTCAATTCTTTAAA+AGG 0.159091 tig0030819:+17405 None:intergenic
TCCTTCAATTTCATGTGTTT+TGG 0.177090 tig0030819:-15513 Msa1444740:CDS
CTTCAGATTACCAACTTCTT+TGG 0.191632 tig0030819:+10703 None:intergenic
CTTTCTCTTTCTTTATCTTT+TGG 0.191821 tig0030819:-17429 Msa1444740:five_prime_UTR
TGGATGTGGACGGCATAAAT+TGG 0.210693 tig0030819:-16659 Msa1444740:CDS
GCATCAGTAACCTGATCTTT+TGG 0.256965 tig0030819:+15467 None:intergenic
TTGCTTTCTAGCAGATTTCT+TGG 0.260392 tig0030819:+10545 None:intergenic
AAGACAGCATGTTGGGAAAA+AGG 0.312564 tig0030819:-15261 Msa1444740:CDS
TGCTAGAAAGCAAGAGTATA+AGG 0.317925 tig0030819:-10535 Msa1444740:CDS
TGTGATGGCGTGCGTGTATC+TGG 0.319600 tig0030819:+15149 None:intergenic
TTCTCTGGTAGGTTTATCTA+TGG 0.325519 tig0030819:-14823 Msa1444740:intron
AAATCAAGTAAATGAGAAAA+TGG 0.332230 tig0030819:-15210 Msa1444740:CDS
CTTATAAGTTGAGACAATTC+AGG 0.344668 tig0030819:-16719 Msa1444740:five_prime_UTR
AGTGATTTCATTGAATATCT+TGG 0.346778 tig0030819:+15181 None:intergenic
TTCAGATTACCAACTTCTTT+GGG 0.351485 tig0030819:+10704 None:intergenic
TGAATCCTCGGTTGTTTGCT+TGG 0.362328 tig0030819:+15388 None:intergenic
ATCATCAACCCTTCTTCGTT+CGG 0.364084 tig0030819:-17383 Msa1444740:five_prime_UTR
CTCGTTCAAGACAGCATGTT+GGG 0.366914 tig0030819:-15268 Msa1444740:CDS
AGGATATTAATGTACCCTTC+AGG 0.369256 tig0030819:-10302 Msa1444740:three_prime_UTR
CGAGTGGATAATATGCAAAT+AGG 0.377339 tig0030819:+10187 None:intergenic
CCCTTCTTCGTTCGGTTCAA+AGG 0.379770 tig0030819:-17375 Msa1444740:five_prime_UTR
GAAGCCAATCCAAAATTTCA+TGG 0.382371 tig0030819:-15432 Msa1444740:CDS
AGAATCAGATGCAGACTGTT+GGG 0.391691 tig0030819:-15580 Msa1444740:CDS
TTAACTTGTACCAGAACATA+AGG 0.392992 tig0030819:+14993 None:intergenic
ATCTACAGAAGCTCCCATTC+AGG 0.403281 tig0030819:+10399 None:intergenic
AAAGATCAGGTTACTGATGC+TGG 0.409528 tig0030819:-15464 Msa1444740:CDS
AGAGTTGTGACTTGAGAAGA+AGG 0.409768 tig0030819:+17489 None:intergenic
GAATTTAGATCAAACATTAC+AGG 0.419398 tig0030819:-10460 Msa1444740:CDS
TGAGCAGTTCCCTTATGTTC+TGG 0.421839 tig0030819:-15003 Msa1444740:CDS
TTAATTTCATTACGATGGTC+AGG 0.423438 tig0030819:+15038 None:intergenic
GGAAATCAAGTTTGTGGGAT+TGG 0.428175 tig0030819:+10343 None:intergenic
CTCTGAATTCCCAAAAGATC+AGG 0.431774 tig0030819:-15477 Msa1444740:CDS
AAGGATATTAAATCAAATCT+TGG 0.438091 tig0030819:-15242 Msa1444740:CDS
TATGCCTCAATTCTTTAAAA+GGG 0.439571 tig0030819:+17406 None:intergenic
TTTGCATAATTTACTCATCC+AGG 0.441361 tig0030819:+10373 None:intergenic
ATGATCAATCTTTGAATCCT+CGG 0.445144 tig0030819:+15376 None:intergenic
TCCAAAACACATGAAATTGA+AGG 0.457238 tig0030819:+15512 None:intergenic
CCTTCTTCGTTCGGTTCAAA+GGG 0.457644 tig0030819:-17374 Msa1444740:intron
TAGTGTTTCAAAGCCAGCTT+TGG 0.463367 tig0030819:-15087 Msa1444740:CDS
GAAGTGGAAATCAAGTTTGT+GGG 0.463863 tig0030819:+10338 None:intergenic
AGAAGAAGGGTACGAGGAAG+AGG 0.463956 tig0030819:+17503 None:intergenic
CCCTTTGAACCGAACGAAGA+AGG 0.465518 tig0030819:+17374 None:intergenic
CAAGGAAACGTGCACCTTGA+AGG 0.469065 tig0030819:+17539 None:intergenic
AGAAGTGGAAATCAAGTTTG+TGG 0.471818 tig0030819:+10337 None:intergenic
GATATTCAATGAAATCACTT+TGG 0.472630 tig0030819:-15177 Msa1444740:CDS
GACAATTTACGATTGTTTGA+AGG 0.474352 tig0030819:-16697 Msa1444740:five_prime_UTR
TTTCATGGAAAGATCTGAAA+AGG 0.475433 tig0030819:-15417 Msa1444740:CDS
GGATATTAATGTACCCTTCA+GGG 0.485655 tig0030819:-10301 Msa1444740:three_prime_UTR
AGCAGAAGCTAAAACCTTCA+AGG 0.486400 tig0030819:-17553 Msa1444740:five_prime_UTR
GCTTCTGCTATTCTGGCGCT+AGG 0.486613 tig0030819:+17567 None:intergenic
AGTATAAGGAGCTTGCAGTA+TGG 0.488570 tig0030819:-10521 Msa1444740:CDS
GTACATTAATATCCTTCATA+AGG 0.488937 tig0030819:+10310 None:intergenic
GAATTAGTTCCCAAAGAAGT+TGG 0.489534 tig0030819:-10713 Msa1444740:CDS
ATATCATGTCTTCTGCCTCC+AGG 0.497633 tig0030819:+16601 None:intergenic
CCACTTCTAAGTCCTTATGA+AGG 0.505104 tig0030819:-10322 Msa1444740:three_prime_UTR
GAAATTTGAAAATATGTGCC+TGG 0.506581 tig0030819:-16619 Msa1444740:CDS
CTTGCCACTTCATCCAAAGC+TGG 0.509797 tig0030819:+15074 None:intergenic
TATTATGATCACCATGGATG+TGG 0.516106 tig0030819:-16673 Msa1444740:exon
GCTTGAGGAAACTTGTGTTA+TGG 0.522590 tig0030819:-10753 Msa1444740:CDS
GAGAATCAGATGCAGACTGT+TGG 0.523090 tig0030819:-15581 Msa1444740:CDS
GGCTTTGAAACACTAGCTAC+AGG 0.524775 tig0030819:+15095 None:intergenic
AAGTTATATTCTGATATCGT+TGG 0.526909 tig0030819:-15545 Msa1444740:CDS
CAACATCTAAAATTCCCTGA+AGG 0.527154 tig0030819:+10287 None:intergenic
CTTCAGATGATCTTCTTGCA+CGG 0.536473 tig0030819:+10775 None:intergenic
TAACTTGTACCAGAACATAA+GGG 0.537497 tig0030819:+14994 None:intergenic
CCTTTGAACCGAACGAAGAA+GGG 0.538606 tig0030819:+17375 None:intergenic
TAGTGTGTCTGAACCTGAAT+GGG 0.539352 tig0030819:-10412 Msa1444740:CDS
AAAGCCAGCTTTGGATGAAG+TGG 0.539961 tig0030819:-15078 Msa1444740:CDS
ATTTATGCCGTCCACATCCA+TGG 0.554553 tig0030819:+16662 None:intergenic
GAAACTTGTGTTATGGTGAC+TGG 0.554745 tig0030819:-10746 Msa1444740:CDS
GGATGTGGACGGCATAAATT+GGG 0.555198 tig0030819:-16658 Msa1444740:CDS
CATTATGAACTCGATCAGAA+TGG 0.556921 tig0030819:+10143 None:intergenic
ATAGTGTGTCTGAACCTGAA+TGG 0.563017 tig0030819:-10413 Msa1444740:CDS
CAAAGAAGTTGGTAATCTGA+AGG 0.564590 tig0030819:-10702 Msa1444740:CDS
GTGGACGGCATAAATTGGGT+TGG 0.566544 tig0030819:-16654 Msa1444740:CDS
TGGTAATCTGAAGGCTAACA+AGG 0.567175 tig0030819:-10693 Msa1444740:intron
GGAGCTTCTGTAGATATACC+TGG 0.567594 tig0030819:-10391 Msa1444740:exon
AGAAGATCATCTGAAGCTTG+AGG 0.576051 tig0030819:-10768 Msa1444740:CDS
AAGATCAGGTTACTGATGCT+GGG 0.576388 tig0030819:-15463 Msa1444740:CDS
AACATCTAAAATTCCCTGAA+GGG 0.582057 tig0030819:+10288 None:intergenic
CCTTCATAAGGACTTAGAAG+TGG 0.585787 tig0030819:+10322 None:intergenic
AAGGAGCTTGCAGTATGGCA+TGG 0.587503 tig0030819:-10516 Msa1444740:CDS
ATGGTGGTTCTATCTCATCC+AGG 0.590037 tig0030819:-14765 Msa1444740:intron
GAAATCTCACAACCTTGTGA+TGG 0.590279 tig0030819:+15134 None:intergenic
TTTAAGAAAACAAGGCGGCA+AGG 0.591309 tig0030819:-10579 Msa1444740:intron
ATTGGTACGAGTTCTTATGA+TGG 0.602949 tig0030819:-14951 Msa1444740:intron
TCTCGTTCAAGACAGCATGT+TGG 0.610151 tig0030819:-15269 Msa1444740:CDS
GAATCAGATGCAGACTGTTG+GGG 0.611114 tig0030819:-15579 Msa1444740:CDS
AATGATGTTGTACATAAGAC+CGG 0.614771 tig0030819:-15344 Msa1444740:CDS
GAGTTGTGACTTGAGAAGAA+GGG 0.625930 tig0030819:+17490 None:intergenic
AGATGACATAATCAAAGCAC+CGG 0.626102 tig0030819:+15325 None:intergenic
TTTAGATCAAACATTACAGG+AGG 0.628569 tig0030819:-10457 Msa1444740:CDS
ATGATCACCATGGATGTGGA+CGG 0.637739 tig0030819:-16669 Msa1444740:CDS
AAGTTACAAATTATTCTGCG+TGG 0.648826 tig0030819:+10238 None:intergenic
GAAGGATATTATGATCACCA+TGG 0.654134 tig0030819:-16679 Msa1444740:exon
CAATTGACAATATCAACGAG+TGG 0.660089 tig0030819:+10171 None:intergenic
GACTTGAGAAGAAGGGTACG+AGG 0.672383 tig0030819:+17497 None:intergenic
TGATGATTGTTCTAATAGCA+TGG 0.676086 tig0030819:-14784 Msa1444740:CDS
GATACACGCACGCCATCACA+AGG 0.680730 tig0030819:-15146 Msa1444740:CDS
TGAAATGAAGAGTACACGTG+TGG 0.699903 tig0030819:-17594 Msa1444740:five_prime_UTR
TAATACCAAGCAAACAACCG+AGG 0.708381 tig0030819:-15393 Msa1444740:CDS
ATTTGAAAATATGTGCCTGG+AGG 0.710944 tig0030819:-16616 Msa1444740:CDS
GGCAGAAGACATGATATACG+AGG 0.734207 tig0030819:-16595 Msa1444740:intron
TGATTGTTCTAATAGCATGG+TGG 0.760060 tig0030819:-14781 Msa1444740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATGAAATAGATAAATA+AGG + tig0030819:10466-10485 None:intergenic 10.0%
!! TCATTCATAAAAAATAAATT+AGG + tig0030819:11859-11878 None:intergenic 10.0%
!!! TCATTAAAAAATTATTTTAG+AGG - tig0030819:14862-14881 Msa1444740:intron 10.0%
!!! TGTTTTGAAATTTATTTTAT+AGG + tig0030819:15091-15110 None:intergenic 10.0%
!!! AATAGAGATAATTTTTTTAA+GGG + tig0030819:17108-17127 None:intergenic 10.0%
!!! AAATAGAGATAATTTTTTTA+AGG + tig0030819:17109-17128 None:intergenic 10.0%
!! TTAAAAAAATTATCTCTATT+TGG - tig0030819:17108-17127 Msa1444740:intron 10.0%
!! TAAAATAGTCAAAATGTTTA+AGG - tig0030819:11534-11553 Msa1444740:intron 15.0%
!! TAAAATAGTCAAAATGTTTA+AGG - tig0030819:11534-11553 Msa1444740:intron 15.0%
!! AAAATAGTCAAAATGTTTAA+GGG - tig0030819:11535-11554 Msa1444740:intron 15.0%
!! TCAAATATAAATAAAACTCA+AGG + tig0030819:11961-11980 None:intergenic 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG - tig0030819:13877-13896 Msa1444740:intron 15.0%
!! GTTTAATATGTAAAAATAGT+GGG + tig0030819:13964-13983 None:intergenic 15.0%
!! TGTTTAATATGTAAAAATAG+TGG + tig0030819:13965-13984 None:intergenic 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG - tig0030819:14118-14137 Msa1444740:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG - tig0030819:14119-14138 Msa1444740:intron 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG - tig0030819:14409-14428 Msa1444740:intron 15.0%
!! AAACTAAAGTAAAAAGATAA+GGG - tig0030819:14410-14429 Msa1444740:intron 15.0%
!!! AAAAAAAAAGTTATTTTCAG+TGG + tig0030819:14778-14797 None:intergenic 15.0%
!! CATAAAAATAAATAGTTAAG+AGG - tig0030819:14942-14961 Msa1444740:intron 15.0%
!!! TTTATTTTATAGGAAAATGT+TGG + tig0030819:15081-15100 None:intergenic 15.0%
!! AAAAAATATCTAATTTCAGA+CGG + tig0030819:15453-15472 None:intergenic 15.0%
!! GCAATAAAATTCTTTATTAA+TGG + tig0030819:15879-15898 None:intergenic 15.0%
!!! TTGAGTTATTTATGATTTTA+TGG - tig0030819:16603-16622 Msa1444740:CDS 15.0%
!!! GTTCAATATTTTATAAAACA+AGG + tig0030819:17543-17562 None:intergenic 15.0%
!!! CTAAAAATTAAAACTTCTTT+TGG - tig0030819:17634-17653 Msa1444740:five_prime_UTR 15.0%
!!! GTTTTAGAAGATAAAGTTAT+TGG - tig0030819:10689-10708 Msa1444740:intron 20.0%
!!! GGAAATTATGGTTTTAATTT+TGG - tig0030819:10749-10768 Msa1444740:CDS 20.0%
!! TAGTTAATTACCTGATTAAA+TGG - tig0030819:10778-10797 Msa1444740:CDS 20.0%
!! TAATAACAAACCATTTAATC+AGG + tig0030819:10791-10810 None:intergenic 20.0%
!!! TTATTATTGCTTCATGTTTT+TGG - tig0030819:10805-10824 Msa1444740:intron 20.0%
!!! AATTGCAAAACACAATTTTA+GGG + tig0030819:11329-11348 None:intergenic 20.0%
!! AATGCTTACAACAATAATTA+AGG + tig0030819:11409-11428 None:intergenic 20.0%
!! TCATTCATAAAAAACAAACT+AGG + tig0030819:11828-11847 None:intergenic 20.0%
!! CATAAAAAATAAATTAGGCA+TGG + tig0030819:11854-11873 None:intergenic 20.0%
!! TATATAAGAAATATAGTAGC+TGG + tig0030819:12115-12134 None:intergenic 20.0%
!! TCTTATATATGTTTGTTCTT+TGG - tig0030819:12126-12145 Msa1444740:intron 20.0%
!! CTTATATATGTTTGTTCTTT+GGG - tig0030819:12127-12146 Msa1444740:intron 20.0%
!! AAGGATATTAAATCAAATCT+TGG - tig0030819:12512-12531 Msa1444740:intron 20.0%
!! AAATCAAGTAAATGAGAAAA+TGG - tig0030819:12544-12563 Msa1444740:intron 20.0%
!!! CATTTTTAATTTCATTACGA+TGG + tig0030819:12724-12743 None:intergenic 20.0%
!!! TGTATTTTTTCTCTTTGATT+TGG - tig0030819:12865-12884 Msa1444740:intron 20.0%
!!! TTTAATAGTATTGTTTTCTC+TGG - tig0030819:12916-12935 Msa1444740:intron 20.0%
!! GAATTATATGAAATAATACC+TGG + tig0030819:13010-13029 None:intergenic 20.0%
!!! TTTCTCTTATAGTTTTTCTA+AGG - tig0030819:13274-13293 Msa1444740:intron 20.0%
!!! CATATTTAAGTACTTTTCAT+TGG + tig0030819:13940-13959 None:intergenic 20.0%
!!! TATTACTCATTTTTACAAGT+GGG - tig0030819:13998-14017 Msa1444740:intron 20.0%
!! GTAATAAAATTTGTACTACT+TGG + tig0030819:14066-14085 None:intergenic 20.0%
!! CATTAAAATCACATAACTAT+AGG + tig0030819:14460-14479 None:intergenic 20.0%
!!! ACTTTAAAATTGTAGCTTAA+TGG + tig0030819:14537-14556 None:intergenic 20.0%
!! GAAACACTAAAATAATGTAA+AGG - tig0030819:14831-14850 Msa1444740:intron 20.0%
!! TAAAACTAAATGATTCTGAA+TGG - tig0030819:15141-15160 Msa1444740:CDS 20.0%
!! GAAGAATATAACTTAAAACA+TGG + tig0030819:15185-15204 None:intergenic 20.0%
!!! TTTTTTTTCGACTATGTTAT+AGG - tig0030819:15467-15486 Msa1444740:CDS 20.0%
!!! AAAAGGTATATAATTTGCAT+GGG + tig0030819:15671-15690 None:intergenic 20.0%
!!! AAAAAGGTATATAATTTGCA+TGG + tig0030819:15672-15691 None:intergenic 20.0%
!!! ATGCAAATTATATACCTTTT+TGG - tig0030819:15671-15690 Msa1444740:intron 20.0%
!! AAAAGATGGAAGAAAAAAAA+GGG + tig0030819:15931-15950 None:intergenic 20.0%
!! TAAAAGATGGAAGAAAAAAA+AGG + tig0030819:15932-15951 None:intergenic 20.0%
!!! TTTCTAACACCATTATTTTT+TGG - tig0030819:15982-16001 Msa1444740:intron 20.0%
!! TCACAAAATAACATTCAAAT+TGG + tig0030819:16016-16035 None:intergenic 20.0%
!! ATGATTTAATATGCACATAT+AGG - tig0030819:16078-16097 Msa1444740:intron 20.0%
!!! AGATAATTTTTTTAAGGGAA+GGG + tig0030819:17103-17122 None:intergenic 20.0%
!!! GAAAATGTAATTTAAGTTAG+AGG + tig0030819:17151-17170 None:intergenic 20.0%
!!! CTAACTTAAATTACATTTTC+CGG - tig0030819:17151-17170 Msa1444740:intron 20.0%
!! CTTTCTCTTTCTTTATCTTT+TGG - tig0030819:10325-10344 Msa1444740:three_prime_UTR 25.0%
!! TATGCCTCAATTCTTTAAAA+GGG + tig0030819:10351-10370 None:intergenic 25.0%
! TTATGCCTCAATTCTTTAAA+AGG + tig0030819:10352-10371 None:intergenic 25.0%
! ATGTTTGGTAAATTAGTTGA+AGG - tig0030819:10656-10675 Msa1444740:intron 25.0%
! TTATTGGATTGTTCTGTTAT+TGG - tig0030819:10705-10724 Msa1444740:CDS 25.0%
! TGTTATGTCTTTATGATTAG+TGG - tig0030819:10896-10915 Msa1444740:intron 25.0%
!! TTCATGATCAATGTACTTTT+AGG - tig0030819:10925-10944 Msa1444740:intron 25.0%
! CTCATATTGTATATACACAA+TGG - tig0030819:11214-11233 Msa1444740:intron 25.0%
!! TGGATTCTTTAGTTTCAAAT+CGG - tig0030819:11234-11253 Msa1444740:intron 25.0%
!! GAATTGCAAAACACAATTTT+AGG + tig0030819:11330-11349 None:intergenic 25.0%
! AATAATTAAGGCAGAATACT+AGG + tig0030819:11397-11416 None:intergenic 25.0%
! CTAAGAAAAAATTACAGCAT+AGG - tig0030819:11666-11685 Msa1444740:intron 25.0%
! AATACCATGCCTAATTTATA+TGG - tig0030819:11878-11897 Msa1444740:intron 25.0%
! AAGTTATATTCTGATATCGT+TGG - tig0030819:12209-12228 Msa1444740:intron 25.0%
! AGTGATTTCATTGAATATCT+TGG + tig0030819:12576-12595 None:intergenic 25.0%
! GATATTCAATGAAATCACTT+TGG - tig0030819:12577-12596 Msa1444740:intron 25.0%
! AAACATGAGATAAAGTCATA+AGG + tig0030819:12838-12857 None:intergenic 25.0%
!!! TGATCATTTTTAACTTCGAA+TGG - tig0030819:12889-12908 Msa1444740:intron 25.0%
!!! GATCATTTTTAACTTCGAAT+GGG - tig0030819:12890-12909 Msa1444740:intron 25.0%
!!! AGTTACTGAGTTTTGATATT+TGG - tig0030819:13036-13055 Msa1444740:intron 25.0%
! AAAAATTCTTTCAGCTTGAA+CGG - tig0030819:13528-13547 Msa1444740:intron 25.0%
! CTACACAGTTTAAATATCTT+GGG + tig0030819:13662-13681 None:intergenic 25.0%
!!! CTATTACTCATTTTTACAAG+TGG - tig0030819:13997-14016 Msa1444740:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG + tig0030819:14025-14044 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG - tig0030819:14038-14057 Msa1444740:intron 25.0%
! TATTACTTCTTTATGCAAGT+GGG - tig0030819:14039-14058 Msa1444740:intron 25.0%
! TTATTACTTCTTTATGCAAG+TGG - tig0030819:14038-14057 Msa1444740:intron 25.0%
! TATTACTTCTTTATGCAAGT+GGG - tig0030819:14039-14058 Msa1444740:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG + tig0030819:14025-14044 None:intergenic 25.0%
! CTTACTACTATTCACAAAAA+GGG - tig0030819:15274-15293 Msa1444740:CDS 25.0%
!! TGTTGTTATTCAGATTTCTA+TGG + tig0030819:15382-15401 None:intergenic 25.0%
!!! TTTTTGGAACTTCTACATTA+GGG - tig0030819:15687-15706 Msa1444740:intron 25.0%
! AAAGATGGAAGAAAAAAAAG+GGG + tig0030819:15930-15949 None:intergenic 25.0%
! ATGATTTAATAGCCACATAT+AGG - tig0030819:16035-16054 Msa1444740:intron 25.0%
! TTACTATGATAAATGTTGGT+AGG - tig0030819:16106-16125 Msa1444740:intron 25.0%
! GAAAGAAACAGAGAAATAAA+GGG + tig0030819:16475-16494 None:intergenic 25.0%
! AGAAAGAAACAGAGAAATAA+AGG + tig0030819:16476-16495 None:intergenic 25.0%
! CAACTGTTCAAAATAAATCA+AGG + tig0030819:16586-16605 None:intergenic 25.0%
!!! TATACTTTTTCCCTATTAGT+AGG - tig0030819:16669-16688 Msa1444740:CDS 25.0%
! ACTGAATGGTTTAATACTAT+CGG + tig0030819:16833-16852 None:intergenic 25.0%
! ATCATTACTGTTATAGAACA+AGG - tig0030819:16948-16967 Msa1444740:intron 25.0%
!!! GAGATAATTTTTTTAAGGGA+AGG + tig0030819:17104-17123 None:intergenic 25.0%
! GAATTTAGATCAAACATTAC+AGG - tig0030819:17294-17313 Msa1444740:intron 25.0%
! GTACATTAATATCCTTCATA+AGG + tig0030819:17447-17466 None:intergenic 25.0%
AGAGGAACAAAAACAAAACA+AGG + tig0030819:10236-10255 None:intergenic 30.0%
CATAAAACAAAAACCCATGA+AGG + tig0030819:10413-10432 None:intergenic 30.0%
ACAAAGAAGTTAAACCTTGT+AGG - tig0030819:10631-10650 Msa1444740:intron 30.0%
TAAACCTTGTAGGTTATGTT+TGG - tig0030819:10641-10660 Msa1444740:intron 30.0%
TTTACCAAACATAACCTACA+AGG + tig0030819:10648-10667 None:intergenic 30.0%
! GGTAAATTAGTTGAAGGTTT+TGG - tig0030819:10662-10681 Msa1444740:intron 30.0%
!! ATTAGTTGAAGGTTTTGGTA+TGG - tig0030819:10667-10686 Msa1444740:intron 30.0%
! CTTATAAGTTGAGACAATTC+AGG - tig0030819:11035-11054 Msa1444740:intron 30.0%
GACAATTTACGATTGTTTGA+AGG - tig0030819:11057-11076 Msa1444740:intron 30.0%
GAAATTTGAAAATATGTGCC+TGG - tig0030819:11135-11154 Msa1444740:intron 30.0%
ATTAACGTCCCATATAGATT+AGG + tig0030819:11746-11765 None:intergenic 30.0%
CATAAAAAACAAACTAGGCA+TGG + tig0030819:11823-11842 None:intergenic 30.0%
GAAACTGATAAAGTTCTATC+AGG + tig0030819:11929-11948 None:intergenic 30.0%
ATAAAACTCAAGGAAGTCAA+AGG + tig0030819:11951-11970 None:intergenic 30.0%
TGAGCTCATGCAAAAATATT+AGG + tig0030819:12030-12049 None:intergenic 30.0%
! ATTTTTGCATGAGCTCATAA+CGG - tig0030819:12033-12052 Msa1444740:intron 30.0%
! TCCTTCAATTTCATGTGTTT+TGG - tig0030819:12241-12260 Msa1444740:intron 30.0%
TCCAAAACACATGAAATTGA+AGG + tig0030819:12245-12264 None:intergenic 30.0%
! CTTTCCATGAAATTTTGGAT+TGG + tig0030819:12329-12348 None:intergenic 30.0%
! CAGATCTTTCCATGAAATTT+TGG + tig0030819:12334-12353 None:intergenic 30.0%
TTTCATGGAAAGATCTGAAA+AGG - tig0030819:12337-12356 Msa1444740:intron 30.0%
ATGATCAATCTTTGAATCCT+CGG + tig0030819:12381-12400 None:intergenic 30.0%
AATGATGTTGTACATAAGAC+CGG - tig0030819:12410-12429 Msa1444740:intron 30.0%
TTAATTTCATTACGATGGTC+AGG + tig0030819:12719-12738 None:intergenic 30.0%
! TAACTTGTACCAGAACATAA+GGG + tig0030819:12763-12782 None:intergenic 30.0%
!! TTAACTTGTACCAGAACATA+AGG + tig0030819:12764-12783 None:intergenic 30.0%
! ATAGTATTGTTTTCTCTGGT+AGG - tig0030819:12920-12939 Msa1444740:intron 30.0%
TGATGATTGTTCTAATAGCA+TGG - tig0030819:12970-12989 Msa1444740:intron 30.0%
!!! GAAGCATTTTAACTCACTAT+AGG - tig0030819:13079-13098 Msa1444740:intron 30.0%
TTAACTCACTATAGGCATTA+TGG - tig0030819:13087-13106 Msa1444740:intron 30.0%
TTTGTATCACATAAAACACC+TGG - tig0030819:13555-13574 Msa1444740:intron 30.0%
TTGTATCACATAAAACACCT+GGG - tig0030819:13556-13575 Msa1444740:intron 30.0%
GCTACACAGTTTAAATATCT+TGG + tig0030819:13663-13682 None:intergenic 30.0%
TATTTAAACTGTGTAGCTTG+TGG - tig0030819:13666-13685 Msa1444740:intron 30.0%
! TCTAGCTTAGAGTTGAAATT+TGG + tig0030819:13705-13724 None:intergenic 30.0%
AGTAGAAGCAAGAGATTATA+TGG + tig0030819:13757-13776 None:intergenic 30.0%
TATAATCTCTTGCTTCTACT+CGG - tig0030819:13757-13776 Msa1444740:intron 30.0%
TTGTTAAAGAACTACCATTG+TGG + tig0030819:13810-13829 None:intergenic 30.0%
ACAATGGTAGTTCTTTAACA+AGG - tig0030819:13809-13828 Msa1444740:intron 30.0%
TTTAACAAGGACTCCTTAAA+TGG - tig0030819:13822-13841 Msa1444740:intron 30.0%
CCTTATTAGTGTATTGTCAT+TGG + tig0030819:13914-13933 None:intergenic 30.0%
CCAATGACAATACACTAATA+AGG - tig0030819:13911-13930 Msa1444740:intron 30.0%
!!! TTTAGTTTTGAACGCACTTA+CGG + tig0030819:14398-14417 None:intergenic 30.0%
! TAAGAGGCAAAACAATTTTC+CGG - tig0030819:14958-14977 Msa1444740:CDS 30.0%
GGAAAATGTTGGTATATTAG+TGG + tig0030819:15070-15089 None:intergenic 30.0%
AGAAAATTGTACGTAAAGCA+TGG + tig0030819:15246-15265 None:intergenic 30.0%
GCTTACTACTATTCACAAAA+AGG - tig0030819:15273-15292 Msa1444740:CDS 30.0%
!! AAAGGGACATTACTTTTGTT+TGG - tig0030819:15291-15310 Msa1444740:CDS 30.0%
AGAAATCTGAATAACAACAG+TGG - tig0030819:15383-15402 Msa1444740:CDS 30.0%
ATATCTAATTTCAGACGGAA+AGG + tig0030819:15448-15467 None:intergenic 30.0%
! TGGAGAAAACTTTGTTGTAA+GGG + tig0030819:15550-15569 None:intergenic 30.0%
! ATGGAGAAAACTTTGTTGTA+AGG + tig0030819:15551-15570 None:intergenic 30.0%
CTAATGTAGAAGTTCCAAAA+AGG + tig0030819:15688-15707 None:intergenic 30.0%
!!! CTTTTTGGAACTTCTACATT+AGG - tig0030819:15686-15705 Msa1444740:intron 30.0%
! AGAATTTTATTGCCAACACA+TGG - tig0030819:15886-15905 Msa1444740:intron 30.0%
! TCTTCCATCTTTTATGTTTG+AGG - tig0030819:15938-15957 Msa1444740:intron 30.0%
! CTTCCATCTTTTATGTTTGA+GGG - tig0030819:15939-15958 Msa1444740:intron 30.0%
GACTCGATACCAAAAAATAA+TGG + tig0030819:15994-16013 None:intergenic 30.0%
GCAGTTACTATGATAAATGT+TGG - tig0030819:16102-16121 Msa1444740:intron 30.0%
TGAAGTAATCACAGTGAAAT+TGG - tig0030819:16205-16224 Msa1444740:intron 30.0%
! ATTTCTCTGTTTCTTTCTTG+TGG - tig0030819:16478-16497 Msa1444740:intron 30.0%
ATCGTAAGATCCTACTAATA+GGG + tig0030819:16682-16701 None:intergenic 30.0%
AATCGTAAGATCCTACTAAT+AGG + tig0030819:16683-16702 None:intergenic 30.0%
TTCAGATTACCAACTTCTTT+GGG + tig0030819:17053-17072 None:intergenic 30.0%
!!! TTTCCGGTTTTAAGAAAACA+AGG - tig0030819:17167-17186 Msa1444740:intron 30.0%
GGAAACAGTGAAAAAGTAAA+CGG - tig0030819:17259-17278 Msa1444740:intron 30.0%
TTTAGATCAAACATTACAGG+AGG - tig0030819:17297-17316 Msa1444740:intron 30.0%
TTTGCATAATTTACTCATCC+AGG + tig0030819:17384-17403 None:intergenic 30.0%
! AACATCTAAAATTCCCTGAA+GGG + tig0030819:17469-17488 None:intergenic 30.0%
AAGTTACAAATTATTCTGCG+TGG + tig0030819:17519-17538 None:intergenic 30.0%
!! TTGGCCCTTTTAAAGAATTG+AGG - tig0030819:10344-10363 Msa1444740:three_prime_UTR 35.0%
!! AAAGGGTATTTCTCCTTCAT+GGG - tig0030819:10397-10416 Msa1444740:exon 35.0%
!! GTTGAAGCTTTTGACTGTTT+AGG - tig0030819:10608-10627 Msa1444740:intron 35.0%
TGTTATTGGCAGGTACAAAA+TGG - tig0030819:10719-10738 Msa1444740:CDS 35.0%
GTTATTGGCAGGTACAAAAT+GGG - tig0030819:10720-10739 Msa1444740:CDS 35.0%
AATCTATTTGTGTCATGAGC+TGG - tig0030819:10850-10869 Msa1444740:intron 35.0%
GAAGGATATTATGATCACCA+TGG - tig0030819:11075-11094 Msa1444740:intron 35.0%
TATTATGATCACCATGGATG+TGG - tig0030819:11081-11100 Msa1444740:intron 35.0%
ATTTGAAAATATGTGCCTGG+AGG - tig0030819:11138-11157 Msa1444740:intron 35.0%
ATGACATGTATCACAAGCAA+TGG + tig0030819:11291-11310 None:intergenic 35.0%
! CAACAGGTGCCATATAAATT+AGG + tig0030819:11890-11909 None:intergenic 35.0%
! TTTTAGTGAACTGAGACAAC+AGG + tig0030819:11906-11925 None:intergenic 35.0%
CTGGCAAGATTGAAAAACAA+TGG + tig0030819:12096-12115 None:intergenic 35.0%
TATGTTTGTTCTTTGGGTAC+AGG - tig0030819:12133-12152 Msa1444740:intron 35.0%
!! TTCATGTGTTTTGGATGAGA+AGG - tig0030819:12250-12269 Msa1444740:intron 35.0%
! CATCAGTAACCTGATCTTTT+GGG + tig0030819:12289-12308 None:intergenic 35.0%
GAAGCCAATCCAAAATTTCA+TGG - tig0030819:12322-12341 Msa1444740:intron 35.0%
AGATGACATAATCAAAGCAC+CGG + tig0030819:12432-12451 None:intergenic 35.0%
TCAGCTGAAGAAAAACAGAT+TGG - tig0030819:12785-12804 Msa1444740:intron 35.0%
ATTGGTACGAGTTCTTATGA+TGG - tig0030819:12803-12822 Msa1444740:intron 35.0%
TTCTCTGGTAGGTTTATCTA+TGG - tig0030819:12931-12950 Msa1444740:intron 35.0%
TGATTGTTCTAATAGCATGG+TGG - tig0030819:12973-12992 Msa1444740:intron 35.0%
AAGATTCATGAGTTGCATAG+AGG + tig0030819:13237-13256 None:intergenic 35.0%
CGAGAATAAAATAAGCTCAG+CGG + tig0030819:13441-13460 None:intergenic 35.0%
!!! CGCTGAGCTTATTTTATTCT+CGG - tig0030819:13439-13458 Msa1444740:intron 35.0%
!!! GCTGAGCTTATTTTATTCTC+GGG - tig0030819:13440-13459 Msa1444740:intron 35.0%
!!! AGCTTATTTTATTCTCGGGT+TGG - tig0030819:13444-13463 Msa1444740:intron 35.0%
TGTATCACATAAAACACCTG+GGG - tig0030819:13557-13576 Msa1444740:intron 35.0%
AACAGCCATCAAATTCAAGT+GGG + tig0030819:13603-13622 None:intergenic 35.0%
TAACAGCCATCAAATTCAAG+TGG + tig0030819:13604-13623 None:intergenic 35.0%
!!! TTCTCTGTCGTTTTGTACTA+TGG - tig0030819:13635-13654 Msa1444740:intron 35.0%
GCAACTTTAGCAAAAGTTGA+CGG + tig0030819:13731-13750 None:intergenic 35.0%
ATAATCTCTTGCTTCTACTC+GGG - tig0030819:13758-13777 Msa1444740:intron 35.0%
AAATAAGTGATGTGTCACGT+GGG + tig0030819:13850-13869 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG + tig0030819:13851-13870 None:intergenic 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG - tig0030819:14202-14221 Msa1444740:intron 35.0%
! AATTTTTCTTCCTCCAATGG+AGG - tig0030819:14205-14224 Msa1444740:intron 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG - tig0030819:14206-14225 Msa1444740:intron 35.0%
TAACTATAGGACTGCAACAA+GGG + tig0030819:14447-14466 None:intergenic 35.0%
ATAACTATAGGACTGCAACA+AGG + tig0030819:14448-14467 None:intergenic 35.0%
ATTCCCATTTCCATGTATCA+TGG - tig0030819:14886-14905 Msa1444740:intron 35.0%
ACACCATGATACATGGAAAT+GGG + tig0030819:14892-14911 None:intergenic 35.0%
AACACCATGATACATGGAAA+TGG + tig0030819:14893-14912 None:intergenic 35.0%
ATTTCCATGTATCATGGTGT+TGG - tig0030819:14892-14911 Msa1444740:intron 35.0%
TCTGTAGCATCTGATGAAAA+TGG - tig0030819:15205-15224 Msa1444740:CDS 35.0%
! GGAGAAAACTTTGTTGTAAG+GGG + tig0030819:15549-15568 None:intergenic 35.0%
GATTTCAACCAACATGTGAT+TGG + tig0030819:15640-15659 None:intergenic 35.0%
! ATCACATGTTGGTTGAAATC+AGG - tig0030819:15640-15659 Msa1444740:intron 35.0%
TAAAACACTCAATTCCCTTC+TGG - tig0030819:15802-15821 Msa1444740:intron 35.0%
AAAACACTCAATTCCCTTCT+GGG - tig0030819:15803-15822 Msa1444740:intron 35.0%
TAACCAAATTCTACCCAGAA+GGG + tig0030819:15819-15838 None:intergenic 35.0%
ATAACCAAATTCTACCCAGA+AGG + tig0030819:15820-15839 None:intergenic 35.0%
! TTTTATTGCCAACACATGGT+CGG - tig0030819:15890-15909 Msa1444740:intron 35.0%
! CATCTTTTATGTTTGAGGGT+GGG - tig0030819:15943-15962 Msa1444740:intron 35.0%
! ATCTTTTATGTTTGAGGGTG+GGG - tig0030819:15944-15963 Msa1444740:intron 35.0%
AACTCTGATGTGATGACTAT+AGG - tig0030819:16179-16198 Msa1444740:intron 35.0%
AAATTGGTATGATTGCGAGT+TGG - tig0030819:16221-16240 Msa1444740:intron 35.0%
!! TCTGGACTTTTTCCCAAATT+TGG - tig0030819:16250-16269 Msa1444740:intron 35.0%
!! CTGGACTTTTTCCCAAATTT+GGG - tig0030819:16251-16270 Msa1444740:intron 35.0%
!! ACTTTTTCCCAAATTTGGGT+TGG - tig0030819:16255-16274 Msa1444740:intron 35.0%
!! CTTTTTCCCAAATTTGGGTT+GGG - tig0030819:16256-16275 Msa1444740:intron 35.0%
AAGAAACCCAACCCAAATTT+GGG + tig0030819:16265-16284 None:intergenic 35.0%
TAAGAAACCCAACCCAAATT+TGG + tig0030819:16266-16285 None:intergenic 35.0%
AAAACCTCTTTCTTCTCTCA+CGG - tig0030819:16369-16388 Msa1444740:intron 35.0%
ACAGAGAAATAAAGGGAAGA+GGG + tig0030819:16468-16487 None:intergenic 35.0%
AACAGAGAAATAAAGGGAAG+AGG + tig0030819:16469-16488 None:intergenic 35.0%
GACAAAGTTACTGATAACAG+AGG + tig0030819:16506-16525 None:intergenic 35.0%
GGTTGAAAGATTGTAAGTTG+AGG + tig0030819:16717-16736 None:intergenic 35.0%
AAGAACAACACGAAACTGAA+TGG + tig0030819:16847-16866 None:intergenic 35.0%
GAATTAGTTCCCAAAGAAGT+TGG - tig0030819:17041-17060 Msa1444740:intron 35.0%
CTTCAGATTACCAACTTCTT+TGG + tig0030819:17054-17073 None:intergenic 35.0%
!! CAAAGAAGTTGGTAATCTGA+AGG - tig0030819:17052-17071 Msa1444740:intron 35.0%
!!! TTTTTTTAAGGGAAGGGAGT+AGG + tig0030819:17097-17116 None:intergenic 35.0%
! TTGCTTTCTAGCAGATTTCT+TGG + tig0030819:17212-17231 None:intergenic 35.0%
! TGCTAGAAAGCAAGAGTATA+AGG - tig0030819:17219-17238 Msa1444740:intron 35.0%
GAAGTGGAAATCAAGTTTGT+GGG + tig0030819:17419-17438 None:intergenic 35.0%
AGAAGTGGAAATCAAGTTTG+TGG + tig0030819:17420-17439 None:intergenic 35.0%
AGGATATTAATGTACCCTTC+AGG - tig0030819:17452-17471 Msa1444740:five_prime_UTR 35.0%
GGATATTAATGTACCCTTCA+GGG - tig0030819:17453-17472 Msa1444740:five_prime_UTR 35.0%
! CAACATCTAAAATTCCCTGA+AGG + tig0030819:17470-17489 None:intergenic 35.0%
CGAGTGGATAATATGCAAAT+AGG + tig0030819:17570-17589 None:intergenic 35.0%
CAATTGACAATATCAACGAG+TGG + tig0030819:17586-17605 None:intergenic 35.0%
CATTATGAACTCGATCAGAA+TGG + tig0030819:17614-17633 None:intergenic 35.0%
! TGAAATGAAGAGTACACGTG+TGG - tig0030819:10160-10179 Msa1444740:three_prime_UTR 40.0%
!!! GGTTTTAGCTTCTGCTATTC+TGG + tig0030819:10197-10216 None:intergenic 40.0%
AGCAGAAGCTAAAACCTTCA+AGG - tig0030819:10201-10220 Msa1444740:three_prime_UTR 40.0%
GAGTTGTGACTTGAGAAGAA+GGG + tig0030819:10267-10286 None:intergenic 40.0%
AGAGTTGTGACTTGAGAAGA+AGG + tig0030819:10268-10287 None:intergenic 40.0%
ATCATCAACCCTTCTTCGTT+CGG - tig0030819:10371-10390 Msa1444740:three_prime_UTR 40.0%
!! CAAAGGGTATTTCTCCTTCA+TGG - tig0030819:10396-10415 Msa1444740:exon 40.0%
TGAGACAGAAGATTCTGTTG+AGG - tig0030819:10585-10604 Msa1444740:intron 40.0%
GAGACAGAAGATTCTGTTGA+GGG - tig0030819:10586-10605 Msa1444740:intron 40.0%
TGGATTGTTCTGTTATTGGC+AGG - tig0030819:10709-10728 Msa1444740:CDS 40.0%
AATGGGACAGTGGGAAATTA+TGG - tig0030819:10737-10756 Msa1444740:CDS 40.0%
TTTGTGTCATGAGCTGGAAA+TGG - tig0030819:10856-10875 Msa1444740:intron 40.0%
CATGTATCACAAGCAATGGT+AGG + tig0030819:11287-11306 None:intergenic 40.0%
CTAGGTACACATAAACCAAG+AGG + tig0030819:11379-11398 None:intergenic 40.0%
CATGTCTAATACCTCGCTAA+AGG + tig0030819:11495-11514 None:intergenic 40.0%
CATGTCTAATACCTCGCTAA+AGG + tig0030819:11495-11514 None:intergenic 40.0%
ACACCCATGCCTAATCTATA+TGG - tig0030819:11734-11753 Msa1444740:intron 40.0%
CACCCATGCCTAATCTATAT+GGG - tig0030819:11735-11754 Msa1444740:intron 40.0%
GTCCCATATAGATTAGGCAT+GGG + tig0030819:11740-11759 None:intergenic 40.0%
! GGTGCCATATAAATTAGGCA+TGG + tig0030819:11885-11904 None:intergenic 40.0%
TGAAAAACAATGGCAGTGCA+GGG + tig0030819:12086-12105 None:intergenic 40.0%
TTGAAAAACAATGGCAGTGC+AGG + tig0030819:12087-12106 None:intergenic 40.0%
TGTTCTTTGGGTACAGGATA+CGG - tig0030819:12139-12158 Msa1444740:intron 40.0%
AGAATCAGATGCAGACTGTT+GGG - tig0030819:12174-12193 Msa1444740:intron 40.0%
CTCTGAATTCCCAAAAGATC+AGG - tig0030819:12277-12296 Msa1444740:intron 40.0%
! GCATCAGTAACCTGATCTTT+TGG + tig0030819:12290-12309 None:intergenic 40.0%
AAAGATCAGGTTACTGATGC+TGG - tig0030819:12290-12309 Msa1444740:intron 40.0%
AAGATCAGGTTACTGATGCT+GGG - tig0030819:12291-12310 Msa1444740:intron 40.0%
TAATACCAAGCAAACAACCG+AGG - tig0030819:12361-12380 Msa1444740:intron 40.0%
AAGACAGCATGTTGGGAAAA+AGG - tig0030819:12493-12512 Msa1444740:intron 40.0%
GAAATCTCACAACCTTGTGA+TGG + tig0030819:12623-12642 None:intergenic 40.0%
TAGTGTTTCAAAGCCAGCTT+TGG - tig0030819:12667-12686 Msa1444740:intron 40.0%
CTTATCCAACTAAGTGGTGA+CGG - tig0030819:13167-13186 Msa1444740:intron 40.0%
CATTAGGAGAGTAGCTCATA+TGG + tig0030819:13331-13350 None:intergenic 40.0%
GCATGTAGAGAGAAGACATT+AGG + tig0030819:13347-13366 None:intergenic 40.0%
AAACTCAGCTTAGGTGGTTT+GGG + tig0030819:13369-13388 None:intergenic 40.0%
!! AGATAGTGGAAACTCAGCTT+AGG + tig0030819:13378-13397 None:intergenic 40.0%
GGTAAGACTAGACAAGATAG+TGG + tig0030819:13392-13411 None:intergenic 40.0%
AAGATGTTGTGTTGGATGTG+CGG + tig0030819:13413-13432 None:intergenic 40.0%
!! TAAGATCGACGGTGTTGTAT+GGG + tig0030819:13493-13512 None:intergenic 40.0%
TTCAAGTGGGGTGATTGAAA+TGG + tig0030819:13590-13609 None:intergenic 40.0%
ATCACCCCACTTGAATTTGA+TGG - tig0030819:13595-13614 Msa1444740:intron 40.0%
ACAGCCATCAAATTCAAGTG+GGG + tig0030819:13602-13621 None:intergenic 40.0%
GGAGTCATTGAGTCCTTAAT+AGG + tig0030819:13893-13912 None:intergenic 40.0%
AAGGAACGGGCAACTATATA+AGG + tig0030819:14174-14193 None:intergenic 40.0%
TATAGTTGCCCGTTCCTTAA+CGG - tig0030819:14176-14195 Msa1444740:intron 40.0%
GAAAAATTGAGTCCCCGTTA+AGG + tig0030819:14193-14212 None:intergenic 40.0%
! GCGGATTATATAGTCCTACT+CGG + tig0030819:14337-14356 None:intergenic 40.0%
! TCCGCAAAAAGTATGCATCT+CGG - tig0030819:14352-14371 Msa1444740:intron 40.0%
!! ACCGAGATGCATACTTTTTG+CGG + tig0030819:14356-14375 None:intergenic 40.0%
! AAAAGTATGCATCTCGGTGA+TGG - tig0030819:14358-14377 Msa1444740:intron 40.0%
ATCTGATGAAAATGGTGCAC+TGG - tig0030819:15213-15232 Msa1444740:CDS 40.0%
! TCATCGTTTTCCAACCACTA+GGG + tig0030819:15333-15352 None:intergenic 40.0%
TGAATAACAACAGTGGCTCT+AGG - tig0030819:15390-15409 Msa1444740:CDS 40.0%
! GAATAACAACAGTGGCTCTA+GGG - tig0030819:15391-15410 Msa1444740:CDS 40.0%
!! AATAACAACAGTGGCTCTAG+GGG - tig0030819:15392-15411 Msa1444740:CDS 40.0%
!! CCAACATGTGATTGGTTTGA+GGG + tig0030819:15632-15651 None:intergenic 40.0%
!! ACCAACATGTGATTGGTTTG+AGG + tig0030819:15633-15652 None:intergenic 40.0%
AACTTCTACATTAGGGTGCA+GGG - tig0030819:15694-15713 Msa1444740:intron 40.0%
ATTCCCTTCTGGGTAGAATT+TGG - tig0030819:15813-15832 Msa1444740:intron 40.0%
TGGAAGATAAAAGACACGTG+AGG + tig0030819:15859-15878 None:intergenic 40.0%
CCACCCTCAAACATAAAAGA+TGG + tig0030819:15945-15964 None:intergenic 40.0%
! CCATCTTTTATGTTTGAGGG+TGG - tig0030819:15942-15961 Msa1444740:intron 40.0%
! TCTTTTATGTTTGAGGGTGG+GGG - tig0030819:15945-15964 Msa1444740:intron 40.0%
ACATCAGAGTTTGTGTTTCG+TGG + tig0030819:16170-16189 None:intergenic 40.0%
GTCTACGTATGATCAAGATG+TGG + tig0030819:16738-16757 None:intergenic 40.0%
CTTCAGATGATCTTCTTGCA+CGG + tig0030819:16982-17001 None:intergenic 40.0%
! AGAAGATCATCTGAAGCTTG+AGG - tig0030819:16986-17005 Msa1444740:intron 40.0%
GCTTGAGGAAACTTGTGTTA+TGG - tig0030819:17001-17020 Msa1444740:intron 40.0%
GAAACTTGTGTTATGGTGAC+TGG - tig0030819:17008-17027 Msa1444740:intron 40.0%
TGGTAATCTGAAGGCTAACA+AGG - tig0030819:17061-17080 Msa1444740:intron 40.0%
!!! CCGCCTTGTTTTCTTAAAAC+CGG + tig0030819:17173-17192 None:intergenic 40.0%
!!! CCGGTTTTAAGAAAACAAGG+CGG - tig0030819:17170-17189 Msa1444740:intron 40.0%
TTTAAGAAAACAAGGCGGCA+AGG - tig0030819:17175-17194 Msa1444740:intron 40.0%
AGTATAAGGAGCTTGCAGTA+TGG - tig0030819:17233-17252 Msa1444740:intron 40.0%
ATAGTGTGTCTGAACCTGAA+TGG - tig0030819:17341-17360 Msa1444740:intron 40.0%
TAGTGTGTCTGAACCTGAAT+GGG - tig0030819:17342-17361 Msa1444740:intron 40.0%
GGAAATCAAGTTTGTGGGAT+TGG + tig0030819:17414-17433 None:intergenic 40.0%
CCTTCATAAGGACTTAGAAG+TGG + tig0030819:17435-17454 None:intergenic 40.0%
CCACTTCTAAGTCCTTATGA+AGG - tig0030819:17432-17451 Msa1444740:five_prime_UTR 40.0%
! ATTCTGCGTGGAGAGATTTT+AGG + tig0030819:17507-17526 None:intergenic 40.0%
CCTTTGAACCGAACGAAGAA+GGG + tig0030819:10382-10401 None:intergenic 45.0%
CCTTCTTCGTTCGGTTCAAA+GGG - tig0030819:10380-10399 Msa1444740:three_prime_UTR 45.0%
CAGGTACAAAATGGGACAGT+GGG - tig0030819:10728-10747 Msa1444740:CDS 45.0%
ATGATCACCATGGATGTGGA+CGG - tig0030819:11085-11104 Msa1444740:intron 45.0%
ATTTATGCCGTCCACATCCA+TGG + tig0030819:11095-11114 None:intergenic 45.0%
TGGATGTGGACGGCATAAAT+TGG - tig0030819:11095-11114 Msa1444740:intron 45.0%
GGATGTGGACGGCATAAATT+GGG - tig0030819:11096-11115 Msa1444740:intron 45.0%
ATATCATGTCTTCTGCCTCC+AGG + tig0030819:11156-11175 None:intergenic 45.0%
GGCAGAAGACATGATATACG+AGG - tig0030819:11159-11178 Msa1444740:intron 45.0%
AGGAAATGCAGCTCTACATG+CGG + tig0030819:11359-11378 None:intergenic 45.0%
TGTAGAGCTGCATTTCCTCT+TGG - tig0030819:11361-11380 Msa1444740:intron 45.0%
GCATTGTAGTCAAAGCCATG+TGG - tig0030819:11424-11443 Msa1444740:intron 45.0%
! GCCTCTAGCTGGTTTAAACA+GGG - tig0030819:11468-11487 Msa1444740:intron 45.0%
ACCCTGTTTAAACCAGCTAG+AGG + tig0030819:11472-11491 None:intergenic 45.0%
TTAAACAGGGTCCTTTAGCG+AGG - tig0030819:11481-11500 Msa1444740:intron 45.0%
! GCCTCTAGCTGGTTTAAACA+GGG - tig0030819:11468-11487 Msa1444740:intron 45.0%
ACCCTGTTTAAACCAGCTAG+AGG + tig0030819:11472-11491 None:intergenic 45.0%
TTAAACAGGGTCCTTTAGCG+AGG - tig0030819:11481-11500 Msa1444740:intron 45.0%
CGTCCCATATAGATTAGGCA+TGG + tig0030819:11741-11760 None:intergenic 45.0%
GAGAATCAGATGCAGACTGT+TGG - tig0030819:12173-12192 Msa1444740:intron 45.0%
GAATCAGATGCAGACTGTTG+GGG - tig0030819:12175-12194 Msa1444740:intron 45.0%
TGAATCCTCGGTTGTTTGCT+TGG + tig0030819:12369-12388 None:intergenic 45.0%
TCTCGTTCAAGACAGCATGT+TGG - tig0030819:12485-12504 Msa1444740:intron 45.0%
CTCGTTCAAGACAGCATGTT+GGG - tig0030819:12486-12505 Msa1444740:intron 45.0%
!! GGCTTTGAAACACTAGCTAC+AGG + tig0030819:12662-12681 None:intergenic 45.0%
!! AAAGCCAGCTTTGGATGAAG+TGG - tig0030819:12676-12695 Msa1444740:intron 45.0%
TGAGCAGTTCCCTTATGTTC+TGG - tig0030819:12751-12770 Msa1444740:intron 45.0%
! ATGGTGGTTCTATCTCATCC+AGG - tig0030819:12989-13008 Msa1444740:intron 45.0%
CCACTTAGTTGGATAAGGCT+TGG + tig0030819:13164-13183 None:intergenic 45.0%
! CCAAGCCTTATCCAACTAAG+TGG - tig0030819:13161-13180 Msa1444740:intron 45.0%
CGTCACCACTTAGTTGGATA+AGG + tig0030819:13169-13188 None:intergenic 45.0%
AGTCATATCACAAGAGGCAG+TGG + tig0030819:13303-13322 None:intergenic 45.0%
GAGGGTAGTCATATCACAAG+AGG + tig0030819:13309-13328 None:intergenic 45.0%
AGGAGAGTAGCTCATATGGA+GGG + tig0030819:13327-13346 None:intergenic 45.0%
TAGGAGAGTAGCTCATATGG+AGG + tig0030819:13328-13347 None:intergenic 45.0%
GAAACTCAGCTTAGGTGGTT+TGG + tig0030819:13370-13389 None:intergenic 45.0%
TAGTGGAAACTCAGCTTAGG+TGG + tig0030819:13375-13394 None:intergenic 45.0%
CGGAGATGAAGATGTTGTGT+TGG + tig0030819:13421-13440 None:intergenic 45.0%
GTTGTATGGGATGGAGTGTA+GGG + tig0030819:13480-13499 None:intergenic 45.0%
TGTTGTATGGGATGGAGTGT+AGG + tig0030819:13481-13500 None:intergenic 45.0%
!! GTAAGATCGACGGTGTTGTA+TGG + tig0030819:13494-13513 None:intergenic 45.0%
GGGGTGATTGAAATGGAAGA+GGG + tig0030819:13583-13602 None:intergenic 45.0%
TGGGGTGATTGAAATGGAAG+AGG + tig0030819:13584-13603 None:intergenic 45.0%
!! GCTTCTAAGAGCATCCACAA+TGG - tig0030819:13793-13812 Msa1444740:intron 45.0%
TCTCTCTCCTGGGTAACTAA+CGG + tig0030819:14147-14166 None:intergenic 45.0%
TTAGTTACCCAGGAGAGAGA+GGG - tig0030819:14147-14166 Msa1444740:intron 45.0%
ATAGTTGCCCGTTCCTTAAC+GGG - tig0030819:14177-14196 Msa1444740:intron 45.0%
ATTGAGTCCCCGTTAAGGAA+CGG + tig0030819:14188-14207 None:intergenic 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG - tig0030819:14239-14258 Msa1444740:intron 45.0%
! AGCCTTAGAGCATCTCCAAT+GGG + tig0030819:14269-14288 None:intergenic 45.0%
! AAGCCTTAGAGCATCTCCAA+TGG + tig0030819:14270-14289 None:intergenic 45.0%
CAGTCCAACACCATGATACA+TGG + tig0030819:14899-14918 None:intergenic 45.0%
! GTATCATGGTGTTGGACTGT+TGG - tig0030819:14900-14919 Msa1444740:intron 45.0%
! GCAAAACAATTTTCCGGAGC+AGG - tig0030819:14964-14983 Msa1444740:CDS 45.0%
CAGTTCAATTGGTGAGCTGA+GGG - tig0030819:14987-15006 Msa1444740:CDS 45.0%
ACTCCTAGTTAGAACCCCTT+GGG + tig0030819:15016-15035 None:intergenic 45.0%
AACTCCTAGTTAGAACCCCT+TGG + tig0030819:15017-15036 None:intergenic 45.0%
AGTGGTTGTGTTCGCTTTCA+GGG + tig0030819:15052-15071 None:intergenic 45.0%
TAGTGGTTGTGTTCGCTTTC+AGG + tig0030819:15053-15072 None:intergenic 45.0%
ATTTCCATGCAATCCCCTAG+TGG - tig0030819:15316-15335 Msa1444740:CDS 45.0%
! CATCGTTTTCCAACCACTAG+GGG + tig0030819:15332-15351 None:intergenic 45.0%
! CTCATCGTTTTCCAACCACT+AGG + tig0030819:15334-15353 None:intergenic 45.0%
CTAGTGGTTGGAAAACGATG+AGG - tig0030819:15332-15351 Msa1444740:CDS 45.0%
TGGTTGGAAAACGATGAGGT+TGG - tig0030819:15336-15355 Msa1444740:CDS 45.0%
TCCAACAGGTTACTGTCAAC+CGG + tig0030819:15509-15528 None:intergenic 45.0%
TGACAGTAACCTGTTGGACA+CGG - tig0030819:15511-15530 Msa1444740:CDS 45.0%
GCACGTTAAGCAAGTGGTTA+AGG + tig0030819:15596-15615 None:intergenic 45.0%
!! TGTGATTGGTTTGAGGGAGA+AGG + tig0030819:15626-15645 None:intergenic 45.0%
CCCTCAAACCAATCACATGT+TGG - tig0030819:15629-15648 Msa1444740:intron 45.0%
GAACTTCTACATTAGGGTGC+AGG - tig0030819:15693-15712 Msa1444740:intron 45.0%
GGATCAGGTGTCTTTGACAT+GGG - tig0030819:15715-15734 Msa1444740:intron 45.0%
ATTCTAGACCGACCATGTGT+TGG + tig0030819:15901-15920 None:intergenic 45.0%
ACTGCAAGTGCACCTATATG+TGG + tig0030819:16050-16069 None:intergenic 45.0%
GTTTGTGTTTCGTGGATCGT+AGG + tig0030819:16162-16181 None:intergenic 45.0%
!! ATTGCGAGTTGGTTACTGTC+TGG - tig0030819:16232-16251 Msa1444740:intron 45.0%
AAATAAAGGGAAGAGGGAGG+AGG + tig0030819:16462-16481 None:intergenic 45.0%
GAGAAATAAAGGGAAGAGGG+AGG + tig0030819:16465-16484 None:intergenic 45.0%
ATCTACAGAAGCTCCCATTC+AGG + tig0030819:17358-17377 None:intergenic 45.0%
GGAGCTTCTGTAGATATACC+TGG - tig0030819:17363-17382 Msa1444740:intron 45.0%
CAAGGAAACGTGCACCTTGA+AGG + tig0030819:10218-10237 None:intergenic 50.0%
! AGAAGAAGGGTACGAGGAAG+AGG + tig0030819:10254-10273 None:intergenic 50.0%
! GACTTGAGAAGAAGGGTACG+AGG + tig0030819:10260-10279 None:intergenic 50.0%
CCCTTCTTCGTTCGGTTCAA+AGG - tig0030819:10379-10398 Msa1444740:three_prime_UTR 50.0%
CCCTTTGAACCGAACGAAGA+AGG + tig0030819:10383-10402 None:intergenic 50.0%
GCAGGTACAAAATGGGACAG+TGG - tig0030819:10727-10746 Msa1444740:CDS 50.0%
GTGGACGGCATAAATTGGGT+TGG - tig0030819:11100-11119 Msa1444740:intron 50.0%
! CGCCTCTAGCTGGTTTAAAC+AGG - tig0030819:11467-11486 Msa1444740:intron 50.0%
! ATGTTTAAGGCGCCTCTAGC+TGG - tig0030819:11547-11566 Msa1444740:intron 50.0%
! CGCCTCTAGCTGGTTTAAAC+AGG - tig0030819:11467-11486 Msa1444740:intron 50.0%
! CTTGCCACTTCATCCAAAGC+TGG + tig0030819:12683-12702 None:intergenic 50.0%
TGTAGCCGTCACCACTTAGT+TGG + tig0030819:13175-13194 None:intergenic 50.0%
!! ACTAAGTGGTGACGGCTACA+TGG - tig0030819:13175-13194 Msa1444740:intron 50.0%
!! ATCGACGGTGTTGTATGGGA+TGG + tig0030819:13489-13508 None:intergenic 50.0%
CCACACAGCTGTAAGATCGA+CGG + tig0030819:13504-13523 None:intergenic 50.0%
ATCTCTTGCTTCTACTCGGG+CGG - tig0030819:13761-13780 Msa1444740:intron 50.0%
TGTCACGTGGGCTCCATTTA+AGG + tig0030819:13838-13857 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG + tig0030819:14146-14165 None:intergenic 50.0%
GTTAGTTACCCAGGAGAGAG+AGG - tig0030819:14146-14165 Msa1444740:intron 50.0%
ATAAGGACCCTCTCTCTCCT+GGG + tig0030819:14157-14176 None:intergenic 50.0%
TATAAGGACCCTCTCTCTCC+TGG + tig0030819:14158-14177 None:intergenic 50.0%
TAGTTGCCCGTTCCTTAACG+GGG - tig0030819:14178-14197 Msa1444740:intron 50.0%
TTGAGTCCCCGTTAAGGAAC+GGG + tig0030819:14187-14206 None:intergenic 50.0%
CTCCAATGGAGGGTCCTTAA+CGG - tig0030819:14216-14235 Msa1444740:intron 50.0%
TCCAATGGAGGGTCCTTAAC+GGG - tig0030819:14217-14236 Msa1444740:intron 50.0%
TGGGGGGTCCTTACTTAACA+AGG + tig0030819:14250-14269 None:intergenic 50.0%
GTTAAGTAAGGACCCCCCAT+TGG - tig0030819:14251-14270 Msa1444740:intron 50.0%
! CTTAGAGCATCTCCAATGGG+GGG + tig0030819:14266-14285 None:intergenic 50.0%
! CCTTAGAGCATCTCCAATGG+GGG + tig0030819:14267-14286 None:intergenic 50.0%
! GCCTTAGAGCATCTCCAATG+GGG + tig0030819:14268-14287 None:intergenic 50.0%
! GTTGGACTGTTGGCTGCTTT+AGG - tig0030819:14910-14929 Msa1444740:intron 50.0%
ACCAATTGAACTGCCTGCTC+CGG + tig0030819:14980-14999 None:intergenic 50.0%
GCAGTTCAATTGGTGAGCTG+AGG - tig0030819:14986-15005 Msa1444740:CDS 50.0%
! ACACCCAAGGGGTTCTAACT+AGG - tig0030819:15010-15029 Msa1444740:CDS 50.0%
! AGGTACGAAGTATCCACCAC+CGG - tig0030819:15487-15506 Msa1444740:CDS 50.0%
AACAGGTTACTGTCAACCGG+TGG + tig0030819:15506-15525 None:intergenic 50.0%
ACCGGTTGACAGTAACCTGT+TGG - tig0030819:15505-15524 Msa1444740:CDS 50.0%
AGTAACCTGTTGGACACGGA+AGG - tig0030819:15515-15534 Msa1444740:CDS 50.0%
TTCTCCATTTGCGAGAGTCG+TGG - tig0030819:15563-15582 Msa1444740:CDS 50.0%
TGATCCACGACTCTCGCAAA+TGG + tig0030819:15570-15589 None:intergenic 50.0%
TACATTAGGGTGCAGGGATC+AGG - tig0030819:15700-15719 Msa1444740:intron 50.0%
GGGATCAGGTGTCTTTGACA+TGG - tig0030819:15714-15733 Msa1444740:intron 50.0%
TAGGATCGTGAGTCAGATCG+TGG - tig0030819:16125-16144 Msa1444740:intron 50.0%
AGGATCGTGAGTCAGATCGT+GGG - tig0030819:16126-16145 Msa1444740:intron 50.0%
TTCGTGGATCGTAGGATCGT+GGG + tig0030819:16154-16173 None:intergenic 50.0%
TTTCGTGGATCGTAGGATCG+TGG + tig0030819:16155-16174 None:intergenic 50.0%
CTCTGCTCAGATCTTCGTGA+TGG - tig0030819:16345-16364 Msa1444740:intron 50.0%
AGAAAATGAGGTGGCTTCGC+AGG + tig0030819:16418-16437 None:intergenic 50.0%
! AGCCACCTCATTTTCTTCCG+AGG - tig0030819:16422-16441 Msa1444740:intron 50.0%
! GCCACCTCATTTTCTTCCGA+GGG - tig0030819:16423-16442 Msa1444740:intron 50.0%
! CCACCTCATTTTCTTCCGAG+GGG - tig0030819:16424-16443 Msa1444740:intron 50.0%
AGTCCCCTCGGAAGAAAATG+AGG + tig0030819:16430-16449 None:intergenic 50.0%
AAGGAGCTTGCAGTATGGCA+TGG - tig0030819:17238-17257 Msa1444740:intron 50.0%
GCTTCTGCTATTCTGGCGCT+AGG + tig0030819:10190-10209 None:intergenic 55.0%
ACCTTCGGATGCTTGCCACA+TGG + tig0030819:11442-11461 None:intergenic 55.0%
! TGTGATGGCGTGCGTGTATC+TGG + tig0030819:12608-12627 None:intergenic 55.0%
GATACACGCACGCCATCACA+AGG - tig0030819:12608-12627 Msa1444740:intron 55.0%
CCGTCGATCTTACAGCTGTG+TGG - tig0030819:13501-13520 Msa1444740:intron 55.0%
TTGAAATGGAAGAGGGCCCC+AGG + tig0030819:13576-13595 None:intergenic 55.0%
CGTTAAGGACCCTCCATTGG+AGG + tig0030819:14218-14237 None:intergenic 55.0%
CCAATGGAGGGTCCTTAACG+GGG - tig0030819:14218-14237 Msa1444740:intron 55.0%
ACAAGGACCACTCCCCGTTA+AGG + tig0030819:14233-14252 None:intergenic 55.0%
CCCCCATTGGAGATGCTCTA+AGG - tig0030819:14264-14283 Msa1444740:intron 55.0%
AGTCCTACTCGGAGAGTCGA+GGG + tig0030819:14326-14345 None:intergenic 55.0%
TAGTCCTACTCGGAGAGTCG+AGG + tig0030819:14327-14346 None:intergenic 55.0%
! TGCATCTCGGTGATGGCTCT+TGG - tig0030819:14365-14384 Msa1444740:intron 55.0%
TCCGGAGCAGGCAGTTCAAT+TGG - tig0030819:14976-14995 Msa1444740:CDS 55.0%
CCAACCACTAGGGGATTGCA+TGG + tig0030819:15323-15342 None:intergenic 55.0%
CCATGCAATCCCCTAGTGGT+TGG - tig0030819:15320-15339 Msa1444740:CDS 55.0%
AGGTTACTGTCAACCGGTGG+TGG + tig0030819:15503-15522 None:intergenic 55.0%
ACTCACCTTCCGTGTCCAAC+AGG + tig0030819:15523-15542 None:intergenic 55.0%
! GTTTGAGGGAGAAGGAGCAC+GGG + tig0030819:15618-15637 None:intergenic 55.0%
GGTTTGAGGGAGAAGGAGCA+CGG + tig0030819:15619-15638 None:intergenic 55.0%
TATGTTTGAGGGTGGGGGCA+TGG - tig0030819:15950-15969 Msa1444740:intron 55.0%
CAGGCCGTGAGAGAAGAAAG+AGG + tig0030819:16376-16395 None:intergenic 55.0%
! TGGAGGAAGGTGTGAGAGAC+AGG + tig0030819:16395-16414 None:intergenic 55.0%
AAATGAGGTGGCTTCGCAGG+TGG + tig0030819:16415-16434 None:intergenic 55.0%
CCCCTCGGAAGAAAATGAGG+TGG + tig0030819:16427-16446 None:intergenic 55.0%
GCAGCTCTACATGCGGCAGT+GGG + tig0030819:11352-11371 None:intergenic 60.0%
TGCAGCTCTACATGCGGCAG+TGG + tig0030819:11353-11372 None:intergenic 60.0%
GCCATGTGGCAAGCATCCGA+AGG - tig0030819:11438-11457 Msa1444740:intron 60.0%
!! GCTAGAGGCGCTGAGACCTT+CGG + tig0030819:11457-11476 None:intergenic 60.0%
AAGGTCTCAGCGCCTCTAGC+TGG - tig0030819:11457-11476 Msa1444740:intron 60.0%
GTGGGACCCGTTAGTTACCC+AGG - tig0030819:14137-14156 Msa1444740:intron 60.0%
CCCCGTTAAGGACCCTCCAT+TGG + tig0030819:14221-14240 None:intergenic 60.0%
GTGAGCTGAGGGACACCCAA+GGG - tig0030819:14998-15017 Msa1444740:CDS 60.0%
TGAGCTGAGGGACACCCAAG+GGG - tig0030819:14999-15018 Msa1444740:CDS 60.0%
GCACGGGCACGTTAAGCAAG+TGG + tig0030819:15602-15621 None:intergenic 60.0%
CTTCCGAGGGGACTGTGACA+CGG - tig0030819:16436-16455 Msa1444740:intron 60.0%
GGAGGGTCCTTAACGGGGAG+TGG - tig0030819:14223-14242 Msa1444740:intron 65.0%
CCTACTCGGAGAGTCGAGGG+AGG + tig0030819:14323-14342 None:intergenic 65.0%
CCTCCCTCGACTCTCCGAGT+AGG - tig0030819:14320-14339 Msa1444740:intron 65.0%
GGTGAGCTGAGGGACACCCA+AGG - tig0030819:14997-15016 Msa1444740:CDS 65.0%
GTGGCTTCGCAGGTGGAGGA+AGG + tig0030819:16408-16427 None:intergenic 65.0%
TGAGGTGGCTTCGCAGGTGG+AGG + tig0030819:16412-16431 None:intergenic 65.0%
AGGCCGTGTCACAGTCCCCT+CGG + tig0030819:16442-16461 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0030819 gene 10119 17657 10119 ID=Msa1444740;Name=Msa1444740
tig0030819 mRNA 10119 17657 10119 ID=Msa1444740-mRNA-1;Parent=Msa1444740;Name=Msa1444740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=350|1|1|1|0.8|0.66|6|282|382
tig0030819 exon 10119 10595 10119 ID=Msa1444740-mRNA-1:exon:14647;Parent=Msa1444740-mRNA-1
tig0030819 exon 10694 10812 10694 ID=Msa1444740-mRNA-1:exon:14646;Parent=Msa1444740-mRNA-1
tig0030819 exon 14766 14834 14766 ID=Msa1444740-mRNA-1:exon:14645;Parent=Msa1444740-mRNA-1
tig0030819 exon 14952 15621 14952 ID=Msa1444740-mRNA-1:exon:14644;Parent=Msa1444740-mRNA-1
tig0030819 exon 16596 16758 16596 ID=Msa1444740-mRNA-1:exon:14643;Parent=Msa1444740-mRNA-1
tig0030819 exon 17375 17657 17375 ID=Msa1444740-mRNA-1:exon:14642;Parent=Msa1444740-mRNA-1
tig0030819 five_prime_UTR 17375 17657 17375 ID=Msa1444740-mRNA-1:five_prime_utr;Parent=Msa1444740-mRNA-1
tig0030819 five_prime_UTR 16692 16758 16692 ID=Msa1444740-mRNA-1:five_prime_utr;Parent=Msa1444740-mRNA-1
tig0030819 CDS 16596 16691 16596 ID=Msa1444740-mRNA-1:cds;Parent=Msa1444740-mRNA-1
tig0030819 CDS 14952 15621 14952 ID=Msa1444740-mRNA-1:cds;Parent=Msa1444740-mRNA-1
tig0030819 CDS 14766 14834 14766 ID=Msa1444740-mRNA-1:cds;Parent=Msa1444740-mRNA-1
tig0030819 CDS 10694 10812 10694 ID=Msa1444740-mRNA-1:cds;Parent=Msa1444740-mRNA-1
tig0030819 CDS 10401 10595 10401 ID=Msa1444740-mRNA-1:cds;Parent=Msa1444740-mRNA-1
tig0030819 three_prime_UTR 10119 10400 10119 ID=Msa1444740-mRNA-1:three_prime_utr;Parent=Msa1444740-mRNA-1
Gene Sequence

>Msa1444740

ATGATCACCATGGATGTGGACGGCATAAATTGGGTTGGAAACTTGTATCAGAAATTTGAAAATATGTGCCTGGAGGCAGAAGACATGATATACGAGGATACGGTTGAATATATTGAGAATCAGATGCAGACTGTTGGGGAAAATGTGAAAAAGTTATATTCTGATATCGTTGGAGATTTACTTCCTTCAATTTCATGTGTTTTGGATGAGAAGGAAGACTCTGAATTCCCAAAAGATCAGGTTACTGATGCTGGGTTCTGTAAGAAGCCAATCCAAAATTTCATGGAAAGATCTGAAAAGGCTAATACCAAGCAAACAACCGAGGATTCAAAGATTGATCATAATGCTGATAATGATGTTGTACATAAGACCGGTGCTTTGATTATGTCATCTTCAAAAAGTTCTGTCAAAAAAAGAAATATTGTTTCTCGTTCAAGACAGCATGTTGGGAAAAAGGATATTAAATCAAATCTTGGCATTGATGAAAATCAAGTAAATGAGAAAATGGCTGCAACCAAGATATTCAATGAAATCACTTTGGAAGAACCAGATACACGCACGCCATCACAAGGTTGTGAGATTTCAAATGAAGATCAAAATCCTGTAGCTAGTGTTTCAAAGCCAGCTTTGGATGAAGTGGCAAGACTTGCTTCTGAACCTGACCATCGTAATGAAATTAAAAATGCTTGTACTGAGCAGTTCCCTTATGTTCTGGTACAAGTTAAATCAGCTGAAGAAAAACAGATTGGTACGAGTTCTTATGATGGTTTATCTATGGATAGAACAATACAGTGTGATGATTGTTCTAATAGCATGGTGGTTCTATCTCATCCAGAACAAGGTCATAAAACCGTGCAAGAAGATCATCTGAAGCTTGAGGAAACTTGTGTTATGGTGACTGGAGATGATCTCGAATTAGTTCCCAAAGAAGTTGGTAATCTGAAGGCTAACAAGAAAACAAGGCGGCAAGGCTTTTCTTTATCCAAGAAATCTGCTAGAAAGCAAGAGTATAAGGAGCTTGCAGTATGGCATGGAAACAGTGAAAAAGTAAACGGAGTTTCAATGAAGAATTTAGATCAAACATTACAGGAGGATCAAAAGAAGTTACTGCTTCATAGTGTGTCTGAACCTGAATGGGAGCTTCTGTAG

Protein sequence

>Msa1444740

MITMDVDGINWVGNLYQKFENMCLEAEDMIYEDTVEYIENQMQTVGENVKKLYSDIVGDLLPSISCVLDEKEDSEFPKDQVTDAGFCKKPIQNFMERSEKANTKQTTEDSKIDHNADNDVVHKTGALIMSSSKSSVKKRNIVSRSRQHVGKKDIKSNLGIDENQVNEKMAATKIFNEITLEEPDTRTPSQGCEISNEDQNPVASVSKPALDEVARLASEPDHRNEIKNACTEQFPYVLVQVKSAEEKQIGTSSYDGLSMDRTIQCDDCSNSMVVLSHPEQGHKTVQEDHLKLEETCVMVTGDDLELVPKEVGNLKANKKTRRQGFSLSKKSARKQEYKELAVWHGNSEKVNGVSMKNLDQTLQEDQKKLLLHSVSEPEWELL*