Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348430 | XP_003603550.1 | 96.164 | 391 | 14 | 1 | 1 | 391 | 1 | 390 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348430 | sp|Q9SJA7|SOX_ARATH | 62.025 | 395 | 143 | 3 | 2 | 390 | 5 | 398 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348430 | G7J2T2 | 96.164 | 391 | 14 | 1 | 1 | 391 | 1 | 390 | 0.0 | 781 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026700 | Msa1348430 | 0.805953 | 1.040665e-49 | -8.615850e-47 |
| Msa0718500 | Msa1348430 | 0.833598 | 4.865414e-56 | -8.615850e-47 |
| Msa0759610 | Msa1348430 | 0.814915 | 1.208205e-51 | -8.615850e-47 |
| Msa0801150 | Msa1348430 | 0.834223 | 3.394432e-56 | -8.615850e-47 |
| Msa0839530 | Msa1348430 | 0.830741 | 2.476134e-55 | -8.615850e-47 |
| Msa0135330 | Msa1348430 | 0.803607 | 3.215915e-49 | -8.615850e-47 |
| Msa0145200 | Msa1348430 | 0.804634 | 1.966314e-49 | -8.615850e-47 |
| Msa0195140 | Msa1348430 | -0.801820 | 7.518968e-49 | -8.615850e-47 |
| Msa1004720 | Msa1348430 | -0.809663 | 1.692905e-50 | -8.615850e-47 |
| Msa0240590 | Msa1348430 | -0.803370 | 3.600697e-49 | -8.615850e-47 |
| Msa0575380 | Msa1348430 | 0.814869 | 1.236912e-51 | -8.615850e-47 |
| Msa0930210 | Msa1348430 | 0.827785 | 1.291093e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348430 | MtrunA17_Chr3g0139041 | 96.164 | 391 | 14 | 1 | 1 | 391 | 1 | 390 | 0.0 | 781 |
| Msa1348430 | MtrunA17_Chr3g0139051 | 75.835 | 389 | 92 | 2 | 4 | 391 | 6 | 393 | 0.0 | 628 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1348430 | AT2G24580.1 | 62.025 | 395 | 143 | 3 | 2 | 390 | 5 | 398 | 0.0 | 523 |
Find 118 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCAACTTACCGGAAAAT+TGG | 0.173878 | tig0010468:+17791 | Msa1348430:CDS |
| CCAAATGACATCTAAGATTT+AGG | 0.201701 | tig0010468:+18557 | Msa1348430:CDS |
| GAATGGGTTGAAGGTATATT+TGG | 0.252986 | tig0010468:+18294 | Msa1348430:CDS |
| TTTGGTAAGGTTTATGTATA+CGG | 0.258322 | tig0010468:+18159 | Msa1348430:CDS |
| TTTAAGATGGCTCCGGTTAT+TGG | 0.277339 | tig0010468:+18459 | Msa1348430:CDS |
| GAACCCCACGGTCTCTTATC+AGG | 0.277612 | tig0010468:-18246 | None:intergenic |
| TGGAGACTCATGTTTGTTAC+TGG | 0.314415 | tig0010468:+18070 | Msa1348430:CDS |
| CTTGCTGGTGGTTGAGGAGC+TGG | 0.325773 | tig0010468:-17747 | None:intergenic |
| CGAATTTGTCGGCAACTTGC+TGG | 0.334129 | tig0010468:-17762 | None:intergenic |
| CCTAAATCTTAGATGTCATT+TGG | 0.347651 | tig0010468:-18557 | None:intergenic |
| TGTGATGATGAATGAGTTAA+AGG | 0.351791 | tig0010468:+18272 | Msa1348430:CDS |
| CATGAAGGTAAATTCGTAAT+TGG | 0.356936 | tig0010468:+18108 | Msa1348430:CDS |
| AATAAGTTAGTTAAAAGAAT+TGG | 0.363920 | tig0010468:+18021 | Msa1348430:CDS |
| TGTATACGGAACACCCGTTC+TGG | 0.367868 | tig0010468:+18173 | Msa1348430:CDS |
| TTCCGGTAAGTTGAATTTGC+CGG | 0.377261 | tig0010468:-17785 | None:intergenic |
| GTCAATATCTTACCAATAAC+CGG | 0.400144 | tig0010468:-18471 | None:intergenic |
| TGATGGAATCATACAAACTT+TGG | 0.400823 | tig0010468:+17599 | Msa1348430:CDS |
| ATGGGCCCATGTCAAGGTGC+TGG | 0.401428 | tig0010468:-17666 | None:intergenic |
| ATTCAACTTACCGGAAAATT+GGG | 0.403849 | tig0010468:+17792 | Msa1348430:CDS |
| TCAAAACCATTACTACCCTT+TGG | 0.419758 | tig0010468:+17576 | Msa1348430:CDS |
| TTCGGGTCATGGGTTTAAGA+TGG | 0.432502 | tig0010468:+18446 | Msa1348430:CDS |
| CGCTTACCAAGCTGCCAAAA+GGG | 0.435208 | tig0010468:+17462 | Msa1348430:CDS |
| AGGATGACTGGGTCGTTGAA+TGG | 0.439447 | tig0010468:-17685 | None:intergenic |
| TTGATGAAAGCGGCGGTTCA+CGG | 0.442976 | tig0010468:+18207 | Msa1348430:CDS |
| TGATAAGAGACCGTGGGGTT+CGG | 0.446371 | tig0010468:+18248 | Msa1348430:CDS |
| TCAATCACAAAATCCTCATC+TGG | 0.453932 | tig0010468:-18375 | None:intergenic |
| GCTGGTGGTTGAGGAGCTGG+TGG | 0.457134 | tig0010468:-17744 | None:intergenic |
| GAATTTGCCGGCGAATTTGT+CGG | 0.465102 | tig0010468:-17773 | None:intergenic |
| ATGTTTCAAGTCAACCTCAT+TGG | 0.466534 | tig0010468:-18517 | None:intergenic |
| CGGCAACTTGCTGGTGGTTG+AGG | 0.471524 | tig0010468:-17753 | None:intergenic |
| GGATGACTGGGTCGTTGAAT+GGG | 0.476633 | tig0010468:-17684 | None:intergenic |
| CCATCACCAAAGGGTAGTAA+TGG | 0.479104 | tig0010468:-17582 | None:intergenic |
| CTGGTGGTTGAGGAGCTGGT+GGG | 0.479799 | tig0010468:-17743 | None:intergenic |
| CAGTTTGATGTGATTATCGT+CGG | 0.485107 | tig0010468:+17415 | Msa1348430:CDS |
| TGGGCCCATGTCAAGGTGCT+GGG | 0.488184 | tig0010468:-17665 | None:intergenic |
| AAACCAGGATACTCCAGAAC+GGG | 0.488893 | tig0010468:-18186 | None:intergenic |
| TCGATAACGGAAAGGATGAC+TGG | 0.499509 | tig0010468:-17697 | None:intergenic |
| CACCACCGTGGCTCTTCCCA+CGG | 0.500105 | tig0010468:+17523 | Msa1348430:CDS |
| GAGTTAAAGGAATGGGTTGA+AGG | 0.505787 | tig0010468:+18285 | Msa1348430:CDS |
| AATAAACGTCGTAGCCCACT+TGG | 0.507960 | tig0010468:-17636 | None:intergenic |
| ATCGTCGGAGCCGGCGTCAT+GGG | 0.511916 | tig0010468:+17430 | Msa1348430:CDS |
| CCATTACTACCCTTTGGTGA+TGG | 0.515191 | tig0010468:+17582 | Msa1348430:CDS |
| TGTTACTGGAGGATTAAAGA+AGG | 0.516115 | tig0010468:+18084 | Msa1348430:CDS |
| CAAAGCCCAGCACCTTGACA+TGG | 0.516206 | tig0010468:+17660 | Msa1348430:CDS |
| CAAACTTTGGAAAGAAGCTC+AGG | 0.518749 | tig0010468:+17612 | Msa1348430:CDS |
| AACTTACCGGAAAATTGGGT+GGG | 0.525415 | tig0010468:+17796 | Msa1348430:CDS |
| CGTGGGAAGAGCCACGGTGG+TGG | 0.526610 | tig0010468:-17522 | None:intergenic |
| GATGTGATTATCGTCGGAGC+CGG | 0.528057 | tig0010468:+17421 | Msa1348430:CDS |
| TATCGTCGGAGCCGGCGTCA+TGG | 0.528247 | tig0010468:+17429 | Msa1348430:CDS |
| GGGTTGAAGGTATATTTGGT+GGG | 0.530189 | tig0010468:+18298 | Msa1348430:CDS |
| ACACCCGTTCTGGAGTATCC+TGG | 0.533689 | tig0010468:+18183 | Msa1348430:CDS |
| TCATGGGTTTAAGATGGCTC+CGG | 0.534121 | tig0010468:+18452 | Msa1348430:CDS |
| CGTTGAATGGGCCCATGTCA+AGG | 0.534705 | tig0010468:-17672 | None:intergenic |
| TTGACTCAACTTGTGGTGGA+TGG | 0.537067 | tig0010468:+18489 | Msa1348430:CDS |
| TGACTCAACTTGTGGTGGAT+GGG | 0.537265 | tig0010468:+18490 | Msa1348430:CDS |
| GAAGGTAAATTCGTAATTGG+TGG | 0.537982 | tig0010468:+18111 | Msa1348430:CDS |
| ATAGGTAGCACGAATGGTGC+GGG | 0.538731 | tig0010468:-17551 | None:intergenic |
| AAGTTAGTTAAAAGAATTGG+CGG | 0.543718 | tig0010468:+18024 | Msa1348430:CDS |
| ATGCAAGATTGTTTCACCAC+TGG | 0.544545 | tig0010468:-18339 | None:intergenic |
| GACTCAACTTGTGGTGGATG+GGG | 0.548693 | tig0010468:+18491 | Msa1348430:CDS |
| AAGCGGCGGTTCACGGTGGT+CGG | 0.560174 | tig0010468:+18214 | Msa1348430:CDS |
| GATGAATGAGTTAAAGGAAT+GGG | 0.561000 | tig0010468:+18278 | Msa1348430:CDS |
| TGTATGATTCCATCACCAAA+GGG | 0.565360 | tig0010468:-17591 | None:intergenic |
| TGGTGGTTGAGGAGCTGGTG+GGG | 0.569538 | tig0010468:-17742 | None:intergenic |
| TTGTATGATTCCATCACCAA+AGG | 0.570668 | tig0010468:-17592 | None:intergenic |
| GTTACTGGAGGATTAAAGAA+GGG | 0.571143 | tig0010468:+18085 | Msa1348430:CDS |
| CAACTTACCGGAAAATTGGG+TGG | 0.574541 | tig0010468:+17795 | Msa1348430:CDS |
| TTTCCGTTATCGAAAACTGC+CGG | 0.577492 | tig0010468:+17707 | Msa1348430:CDS |
| TTTGGCAGCTTGGTAAGCGG+TGG | 0.578304 | tig0010468:-17458 | None:intergenic |
| CGATAACGGAAAGGATGACT+GGG | 0.583598 | tig0010468:-17696 | None:intergenic |
| AGACTCATGTTTGTTACTGG+AGG | 0.585228 | tig0010468:+18073 | Msa1348430:CDS |
| AACCCCACGGTCTCTTATCA+GGG | 0.589215 | tig0010468:-18245 | None:intergenic |
| GGTTGAAGGTATATTTGGTG+GGG | 0.591110 | tig0010468:+18299 | Msa1348430:CDS |
| GAAAGACAACACAAAGGTGA+CGG | 0.591577 | tig0010468:+17906 | Msa1348430:CDS |
| CGTGGTAACTGTTGGAGCGT+GGG | 0.592036 | tig0010468:+17996 | Msa1348430:CDS |
| CAAGTTGCCGACAAATTCGC+CGG | 0.592904 | tig0010468:+17766 | Msa1348430:CDS |
| CAGTATGCCACCGTGTTCAG+TGG | 0.593018 | tig0010468:-17824 | None:intergenic |
| TGGGTTGAAGGTATATTTGG+TGG | 0.596963 | tig0010468:+18297 | Msa1348430:CDS |
| TTGAATATAGGTAGCACGAA+TGG | 0.600981 | tig0010468:-17557 | None:intergenic |
| AGGATTAAAGAAGGGCATGA+AGG | 0.601588 | tig0010468:+18093 | Msa1348430:CDS |
| GTAAGCGAGTGTCTGAAACA+TGG | 0.603260 | tig0010468:-17866 | None:intergenic |
| AAAGCCCAGCACCTTGACAT+GGG | 0.605253 | tig0010468:+17661 | Msa1348430:CDS |
| GCGAATGGTGAAAAGTTTCG+CGG | 0.614581 | tig0010468:+17964 | Msa1348430:CDS |
| GTGGGCTTGTCCACTGAACA+CGG | 0.616816 | tig0010468:+17814 | Msa1348430:CDS |
| TATAGGTAGCACGAATGGTG+CGG | 0.617133 | tig0010468:-17552 | None:intergenic |
| ATTTGTCGGCAACTTGCTGG+TGG | 0.619796 | tig0010468:-17759 | None:intergenic |
| GAGTGTCTGAAACATGGCAG+TGG | 0.623398 | tig0010468:-17860 | None:intergenic |
| GTAACAAACATGAGTCTCCA+CGG | 0.623803 | tig0010468:-18067 | None:intergenic |
| ATCAAACTGAGAATCCTCCA+TGG | 0.630391 | tig0010468:-17401 | None:intergenic |
| GATATTGACTCAACTTGTGG+TGG | 0.632361 | tig0010468:+18485 | Msa1348430:CDS |
| GAAAGAAGCTCAGGCCCAAG+TGG | 0.634846 | tig0010468:+17621 | Msa1348430:CDS |
| GCTTACCAAGCTGCCAAAAG+GGG | 0.635400 | tig0010468:+17463 | Msa1348430:CDS |
| GTATCCTGGTTTGATGAAAG+CGG | 0.638868 | tig0010468:+18197 | Msa1348430:CDS |
| TAACAAACATGAGTCTCCAC+GGG | 0.640451 | tig0010468:-18066 | None:intergenic |
| GCGTGGTAACTGTTGGAGCG+TGG | 0.640546 | tig0010468:+17995 | Msa1348430:CDS |
| TCCTGGTTTGATGAAAGCGG+CGG | 0.643170 | tig0010468:+18200 | Msa1348430:CDS |
| TAAGATATTGACTCAACTTG+TGG | 0.647466 | tig0010468:+18482 | Msa1348430:CDS |
| AATGGTGCGGGATTCACCGT+GGG | 0.647649 | tig0010468:-17539 | None:intergenic |
| TGATGAATGAGTTAAAGGAA+TGG | 0.652223 | tig0010468:+18277 | Msa1348430:CDS |
| TGTTGATTCAAGTGAGCCAG+TGG | 0.653308 | tig0010468:+18323 | Msa1348430:CDS |
| ATAAACGTCGTAGCCCACTT+GGG | 0.656688 | tig0010468:-17635 | None:intergenic |
| ATTCACCGTGGGAAGAGCCA+CGG | 0.656819 | tig0010468:-17528 | None:intergenic |
| TGACCCTGATAAGAGACCGT+GGG | 0.660404 | tig0010468:+18242 | Msa1348430:CDS |
| ACCGCCGCTTTCATCAAACC+AGG | 0.661511 | tig0010468:-18201 | None:intergenic |
| GTATTCAATGACACCAGATG+AGG | 0.662964 | tig0010468:+18362 | Msa1348430:CDS |
| TGAAATTCCGATAAAACCCG+TGG | 0.665272 | tig0010468:+18050 | Msa1348430:CDS |
| ATCATCACAACCGAACCCCA+CGG | 0.667993 | tig0010468:-18258 | None:intergenic |
| AAAGAAGCTCAGGCCCAAGT+GGG | 0.673586 | tig0010468:+17622 | Msa1348430:CDS |
| GAATGGTGCGGGATTCACCG+TGG | 0.676672 | tig0010468:-17540 | None:intergenic |
| GGTGGAACTTCCCATGACGC+CGG | 0.677539 | tig0010468:-17440 | None:intergenic |
| CACCGTGGGAAGAGCCACGG+TGG | 0.685084 | tig0010468:-17525 | None:intergenic |
| GGTGGATGGGGAAACCAATG+AGG | 0.686695 | tig0010468:+18503 | Msa1348430:CDS |
| CAAACCAGGATACTCCAGAA+CGG | 0.691879 | tig0010468:-18187 | None:intergenic |
| GACCCTGATAAGAGACCGTG+GGG | 0.710999 | tig0010468:+18243 | Msa1348430:CDS |
| ATGAAAGCGGCGGTTCACGG+TGG | 0.717613 | tig0010468:+18210 | Msa1348430:CDS |
| GTGACCCTGATAAGAGACCG+TGG | 0.727740 | tig0010468:+18241 | Msa1348430:CDS |
| TTTGACTTTCTCCACCACCG+TGG | 0.727973 | tig0010468:+17511 | Msa1348430:CDS |
| GGCTTGTCCACTGAACACGG+TGG | 0.742191 | tig0010468:+17817 | Msa1348430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGTTAGTTAAAAGAAT+TGG | + | tig0010468:18021-18040 | Msa1348430:CDS | 15.0% |
| !! | AATAAGTTAGTTAAAAGAAT+TGG | + | tig0010468:18021-18040 | Msa1348430:CDS | 15.0% |
| !!! | GATTTTGTGATTGATTTTTT+GGG | + | tig0010468:18384-18403 | Msa1348430:CDS | 20.0% |
| !!! | GATTTTGTGATTGATTTTTT+GGG | + | tig0010468:18384-18403 | Msa1348430:CDS | 20.0% |
| !!! | GTAGTAATGGTTTTGAATAT+AGG | - | tig0010468:17572-17591 | None:intergenic | 25.0% |
| ! | AAGTTAGTTAAAAGAATTGG+CGG | + | tig0010468:18024-18043 | Msa1348430:CDS | 25.0% |
| ! | TTTGGTAAGGTTTATGTATA+CGG | + | tig0010468:18159-18178 | Msa1348430:CDS | 25.0% |
| !!! | GGATTTTGTGATTGATTTTT+TGG | + | tig0010468:18383-18402 | Msa1348430:CDS | 25.0% |
| !! | TTTGGAAAAAATGTGGTTTT+GGG | + | tig0010468:18414-18433 | Msa1348430:CDS | 25.0% |
| !!! | GTAGTAATGGTTTTGAATAT+AGG | - | tig0010468:17572-17591 | None:intergenic | 25.0% |
| ! | AAGTTAGTTAAAAGAATTGG+CGG | + | tig0010468:18024-18043 | Msa1348430:CDS | 25.0% |
| ! | TTTGGTAAGGTTTATGTATA+CGG | + | tig0010468:18159-18178 | Msa1348430:CDS | 25.0% |
| !!! | GGATTTTGTGATTGATTTTT+TGG | + | tig0010468:18383-18402 | Msa1348430:CDS | 25.0% |
| !! | TTTGGAAAAAATGTGGTTTT+GGG | + | tig0010468:18414-18433 | Msa1348430:CDS | 25.0% |
| TGATGGAATCATACAAACTT+TGG | + | tig0010468:17599-17618 | Msa1348430:CDS | 30.0% | |
| AATTCAACTTACCGGAAAAT+TGG | + | tig0010468:17791-17810 | Msa1348430:CDS | 30.0% | |
| ATTCAACTTACCGGAAAATT+GGG | + | tig0010468:17792-17811 | Msa1348430:CDS | 30.0% | |
| !!! | TGTTTTGAAAGACAACACAA+AGG | + | tig0010468:17900-17919 | Msa1348430:CDS | 30.0% |
| CATGAAGGTAAATTCGTAAT+TGG | + | tig0010468:18108-18127 | Msa1348430:CDS | 30.0% | |
| !!! | TTTTGCTAGCTTTTTTGGTA+AGG | + | tig0010468:18146-18165 | Msa1348430:CDS | 30.0% |
| ! | TGTGATGATGAATGAGTTAA+AGG | + | tig0010468:18272-18291 | Msa1348430:CDS | 30.0% |
| TGATGAATGAGTTAAAGGAA+TGG | + | tig0010468:18277-18296 | Msa1348430:CDS | 30.0% | |
| GATGAATGAGTTAAAGGAAT+GGG | + | tig0010468:18278-18297 | Msa1348430:CDS | 30.0% | |
| !!! | TTTGTGATTGATTTTTTGGG+TGG | + | tig0010468:18387-18406 | Msa1348430:CDS | 30.0% |
| ! | GTTTGGAAAAAATGTGGTTT+TGG | + | tig0010468:18413-18432 | Msa1348430:CDS | 30.0% |
| GTCAATATCTTACCAATAAC+CGG | - | tig0010468:18474-18493 | None:intergenic | 30.0% | |
| !! | TAAGATATTGACTCAACTTG+TGG | + | tig0010468:18482-18501 | Msa1348430:CDS | 30.0% |
| !!! | AGGTTGACTTGAAACATTTT+AGG | + | tig0010468:18523-18542 | Msa1348430:CDS | 30.0% |
| !!! | GACTTGAAACATTTTAGGAT+TGG | + | tig0010468:18528-18547 | Msa1348430:CDS | 30.0% |
| TGATGGAATCATACAAACTT+TGG | + | tig0010468:17599-17618 | Msa1348430:CDS | 30.0% | |
| AATTCAACTTACCGGAAAAT+TGG | + | tig0010468:17791-17810 | Msa1348430:CDS | 30.0% | |
| ATTCAACTTACCGGAAAATT+GGG | + | tig0010468:17792-17811 | Msa1348430:CDS | 30.0% | |
| !!! | TGTTTTGAAAGACAACACAA+AGG | + | tig0010468:17900-17919 | Msa1348430:CDS | 30.0% |
| CATGAAGGTAAATTCGTAAT+TGG | + | tig0010468:18108-18127 | Msa1348430:CDS | 30.0% | |
| !!! | TTTTGCTAGCTTTTTTGGTA+AGG | + | tig0010468:18146-18165 | Msa1348430:CDS | 30.0% |
| ! | TGTGATGATGAATGAGTTAA+AGG | + | tig0010468:18272-18291 | Msa1348430:CDS | 30.0% |
| TGATGAATGAGTTAAAGGAA+TGG | + | tig0010468:18277-18296 | Msa1348430:CDS | 30.0% | |
| GATGAATGAGTTAAAGGAAT+GGG | + | tig0010468:18278-18297 | Msa1348430:CDS | 30.0% | |
| !!! | TTTGTGATTGATTTTTTGGG+TGG | + | tig0010468:18387-18406 | Msa1348430:CDS | 30.0% |
| ! | GTTTGGAAAAAATGTGGTTT+TGG | + | tig0010468:18413-18432 | Msa1348430:CDS | 30.0% |
| GTCAATATCTTACCAATAAC+CGG | - | tig0010468:18474-18493 | None:intergenic | 30.0% | |
| !! | TAAGATATTGACTCAACTTG+TGG | + | tig0010468:18482-18501 | Msa1348430:CDS | 30.0% |
| !!! | AGGTTGACTTGAAACATTTT+AGG | + | tig0010468:18523-18542 | Msa1348430:CDS | 30.0% |
| !!! | GACTTGAAACATTTTAGGAT+TGG | + | tig0010468:18528-18547 | Msa1348430:CDS | 30.0% |
| CAGTTTGATGTGATTATCGT+CGG | + | tig0010468:17415-17434 | Msa1348430:CDS | 35.0% | |
| TTGAATATAGGTAGCACGAA+TGG | - | tig0010468:17560-17579 | None:intergenic | 35.0% | |
| TCAAAACCATTACTACCCTT+TGG | + | tig0010468:17576-17595 | Msa1348430:CDS | 35.0% | |
| TGTATGATTCCATCACCAAA+GGG | - | tig0010468:17594-17613 | None:intergenic | 35.0% | |
| TTGTATGATTCCATCACCAA+AGG | - | tig0010468:17595-17614 | None:intergenic | 35.0% | |
| !! | GTGACGGATATAAAAAACGA+CGG | + | tig0010468:17922-17941 | Msa1348430:CDS | 35.0% |
| AAAAAATGCGTGGTAACTGT+TGG | + | tig0010468:17988-18007 | Msa1348430:CDS | 35.0% | |
| TGTTACTGGAGGATTAAAGA+AGG | + | tig0010468:18084-18103 | Msa1348430:CDS | 35.0% | |
| GTTACTGGAGGATTAAAGAA+GGG | + | tig0010468:18085-18104 | Msa1348430:CDS | 35.0% | |
| GAAGGTAAATTCGTAATTGG+TGG | + | tig0010468:18111-18130 | Msa1348430:CDS | 35.0% | |
| CCAAAAAAGCTAGCAAAAGT+TGG | - | tig0010468:18144-18163 | None:intergenic | 35.0% | |
| !!! | CCAACTTTTGCTAGCTTTTT+TGG | + | tig0010468:18141-18160 | Msa1348430:CDS | 35.0% |
| !! | GAATGGGTTGAAGGTATATT+TGG | + | tig0010468:18294-18313 | Msa1348430:CDS | 35.0% |
| TCAATCACAAAATCCTCATC+TGG | - | tig0010468:18378-18397 | None:intergenic | 35.0% | |
| TGGTGAGTTTGGAAAAAATG+TGG | + | tig0010468:18407-18426 | Msa1348430:CDS | 35.0% | |
| !!! | AAAAATGTGGTTTTGGGTGT+TGG | + | tig0010468:18420-18439 | Msa1348430:CDS | 35.0% |
| !!! | AAAATGTGGTTTTGGGTGTT+GGG | + | tig0010468:18421-18440 | Msa1348430:CDS | 35.0% |
| ! | ATGTTTCAAGTCAACCTCAT+TGG | - | tig0010468:18520-18539 | None:intergenic | 35.0% |
| CAGTTTGATGTGATTATCGT+CGG | + | tig0010468:17415-17434 | Msa1348430:CDS | 35.0% | |
| TTGAATATAGGTAGCACGAA+TGG | - | tig0010468:17560-17579 | None:intergenic | 35.0% | |
| TCAAAACCATTACTACCCTT+TGG | + | tig0010468:17576-17595 | Msa1348430:CDS | 35.0% | |
| TGTATGATTCCATCACCAAA+GGG | - | tig0010468:17594-17613 | None:intergenic | 35.0% | |
| TTGTATGATTCCATCACCAA+AGG | - | tig0010468:17595-17614 | None:intergenic | 35.0% | |
| !! | GTGACGGATATAAAAAACGA+CGG | + | tig0010468:17922-17941 | Msa1348430:CDS | 35.0% |
| AAAAAATGCGTGGTAACTGT+TGG | + | tig0010468:17988-18007 | Msa1348430:CDS | 35.0% | |
| TGTTACTGGAGGATTAAAGA+AGG | + | tig0010468:18084-18103 | Msa1348430:CDS | 35.0% | |
| GTTACTGGAGGATTAAAGAA+GGG | + | tig0010468:18085-18104 | Msa1348430:CDS | 35.0% | |
| GAAGGTAAATTCGTAATTGG+TGG | + | tig0010468:18111-18130 | Msa1348430:CDS | 35.0% | |
| CCAAAAAAGCTAGCAAAAGT+TGG | - | tig0010468:18144-18163 | None:intergenic | 35.0% | |
| !!! | CCAACTTTTGCTAGCTTTTT+TGG | + | tig0010468:18141-18160 | Msa1348430:CDS | 35.0% |
| !! | GAATGGGTTGAAGGTATATT+TGG | + | tig0010468:18294-18313 | Msa1348430:CDS | 35.0% |
| TCAATCACAAAATCCTCATC+TGG | - | tig0010468:18378-18397 | None:intergenic | 35.0% | |
| TGGTGAGTTTGGAAAAAATG+TGG | + | tig0010468:18407-18426 | Msa1348430:CDS | 35.0% | |
| !!! | AAAAATGTGGTTTTGGGTGT+TGG | + | tig0010468:18420-18439 | Msa1348430:CDS | 35.0% |
| !!! | AAAATGTGGTTTTGGGTGTT+GGG | + | tig0010468:18421-18440 | Msa1348430:CDS | 35.0% |
| ! | ATGTTTCAAGTCAACCTCAT+TGG | - | tig0010468:18520-18539 | None:intergenic | 35.0% |
| ! | CAAACTTTGGAAAGAAGCTC+AGG | + | tig0010468:17612-17631 | Msa1348430:CDS | 40.0% |
| TTTCCGTTATCGAAAACTGC+CGG | + | tig0010468:17707-17726 | Msa1348430:CDS | 40.0% | |
| ! | TTTCCGGCAGTTTTCGATAA+CGG | - | tig0010468:17713-17732 | None:intergenic | 40.0% |
| !! | GGTGGGGTATTTTATGTTTC+CGG | - | tig0010468:17729-17748 | None:intergenic | 40.0% |
| ! | TTCCGGTAAGTTGAATTTGC+CGG | - | tig0010468:17788-17807 | None:intergenic | 40.0% |
| AACTTACCGGAAAATTGGGT+GGG | + | tig0010468:17796-17815 | Msa1348430:CDS | 40.0% | |
| CAGACACTCGCTTACAAAAA+CGG | + | tig0010468:17874-17893 | Msa1348430:CDS | 40.0% | |
| GAAAGACAACACAAAGGTGA+CGG | + | tig0010468:17906-17925 | Msa1348430:CDS | 40.0% | |
| ACGGATATAAAAAACGACGG+AGG | + | tig0010468:17925-17944 | Msa1348430:CDS | 40.0% | |
| ! | GTTGTAGTTTTTACCGCGAA+TGG | + | tig0010468:17949-17968 | Msa1348430:CDS | 40.0% |
| TGAAATTCCGATAAAACCCG+TGG | + | tig0010468:18050-18069 | Msa1348430:CDS | 40.0% | |
| TAACAAACATGAGTCTCCAC+GGG | - | tig0010468:18069-18088 | None:intergenic | 40.0% | |
| GTAACAAACATGAGTCTCCA+CGG | - | tig0010468:18070-18089 | None:intergenic | 40.0% | |
| ! | TGGAGACTCATGTTTGTTAC+TGG | + | tig0010468:18070-18089 | Msa1348430:CDS | 40.0% |
| ! | AGACTCATGTTTGTTACTGG+AGG | + | tig0010468:18073-18092 | Msa1348430:CDS | 40.0% |
| ! | AGGATTAAAGAAGGGCATGA+AGG | + | tig0010468:18093-18112 | Msa1348430:CDS | 40.0% |
| ! | GTATCCTGGTTTGATGAAAG+CGG | + | tig0010468:18197-18216 | Msa1348430:CDS | 40.0% |
| !! | GAGTTAAAGGAATGGGTTGA+AGG | + | tig0010468:18285-18304 | Msa1348430:CDS | 40.0% |
| ! | TGGGTTGAAGGTATATTTGG+TGG | + | tig0010468:18297-18316 | Msa1348430:CDS | 40.0% |
| ! | GGGTTGAAGGTATATTTGGT+GGG | + | tig0010468:18298-18317 | Msa1348430:CDS | 40.0% |
| ! | GGTTGAAGGTATATTTGGTG+GGG | + | tig0010468:18299-18318 | Msa1348430:CDS | 40.0% |
| ATGCAAGATTGTTTCACCAC+TGG | - | tig0010468:18342-18361 | None:intergenic | 40.0% | |
| GTATTCAATGACACCAGATG+AGG | + | tig0010468:18362-18381 | Msa1348430:CDS | 40.0% | |
| !!! | GATTTTTTGGGTGGTGAGTT+TGG | + | tig0010468:18396-18415 | Msa1348430:CDS | 40.0% |
| ! | TTTAAGATGGCTCCGGTTAT+TGG | + | tig0010468:18459-18478 | Msa1348430:CDS | 40.0% |
| !! | GATATTGACTCAACTTGTGG+TGG | + | tig0010468:18485-18504 | Msa1348430:CDS | 40.0% |
| ! | CAAACTTTGGAAAGAAGCTC+AGG | + | tig0010468:17612-17631 | Msa1348430:CDS | 40.0% |
| TTTCCGTTATCGAAAACTGC+CGG | + | tig0010468:17707-17726 | Msa1348430:CDS | 40.0% | |
| ! | TTTCCGGCAGTTTTCGATAA+CGG | - | tig0010468:17713-17732 | None:intergenic | 40.0% |
| !! | GGTGGGGTATTTTATGTTTC+CGG | - | tig0010468:17729-17748 | None:intergenic | 40.0% |
| ! | TTCCGGTAAGTTGAATTTGC+CGG | - | tig0010468:17788-17807 | None:intergenic | 40.0% |
| AACTTACCGGAAAATTGGGT+GGG | + | tig0010468:17796-17815 | Msa1348430:CDS | 40.0% | |
| CAGACACTCGCTTACAAAAA+CGG | + | tig0010468:17874-17893 | Msa1348430:CDS | 40.0% | |
| GAAAGACAACACAAAGGTGA+CGG | + | tig0010468:17906-17925 | Msa1348430:CDS | 40.0% | |
| ACGGATATAAAAAACGACGG+AGG | + | tig0010468:17925-17944 | Msa1348430:CDS | 40.0% | |
| ! | GTTGTAGTTTTTACCGCGAA+TGG | + | tig0010468:17949-17968 | Msa1348430:CDS | 40.0% |
| TGAAATTCCGATAAAACCCG+TGG | + | tig0010468:18050-18069 | Msa1348430:CDS | 40.0% | |
| TAACAAACATGAGTCTCCAC+GGG | - | tig0010468:18069-18088 | None:intergenic | 40.0% | |
| GTAACAAACATGAGTCTCCA+CGG | - | tig0010468:18070-18089 | None:intergenic | 40.0% | |
| ! | TGGAGACTCATGTTTGTTAC+TGG | + | tig0010468:18070-18089 | Msa1348430:CDS | 40.0% |
| ! | AGACTCATGTTTGTTACTGG+AGG | + | tig0010468:18073-18092 | Msa1348430:CDS | 40.0% |
| ! | AGGATTAAAGAAGGGCATGA+AGG | + | tig0010468:18093-18112 | Msa1348430:CDS | 40.0% |
| ! | GTATCCTGGTTTGATGAAAG+CGG | + | tig0010468:18197-18216 | Msa1348430:CDS | 40.0% |
| !! | GAGTTAAAGGAATGGGTTGA+AGG | + | tig0010468:18285-18304 | Msa1348430:CDS | 40.0% |
| ! | TGGGTTGAAGGTATATTTGG+TGG | + | tig0010468:18297-18316 | Msa1348430:CDS | 40.0% |
| ! | GGGTTGAAGGTATATTTGGT+GGG | + | tig0010468:18298-18317 | Msa1348430:CDS | 40.0% |
| ! | GGTTGAAGGTATATTTGGTG+GGG | + | tig0010468:18299-18318 | Msa1348430:CDS | 40.0% |
| ATGCAAGATTGTTTCACCAC+TGG | - | tig0010468:18342-18361 | None:intergenic | 40.0% | |
| GTATTCAATGACACCAGATG+AGG | + | tig0010468:18362-18381 | Msa1348430:CDS | 40.0% | |
| !!! | GATTTTTTGGGTGGTGAGTT+TGG | + | tig0010468:18396-18415 | Msa1348430:CDS | 40.0% |
| ! | TTTAAGATGGCTCCGGTTAT+TGG | + | tig0010468:18459-18478 | Msa1348430:CDS | 40.0% |
| !! | GATATTGACTCAACTTGTGG+TGG | + | tig0010468:18485-18504 | Msa1348430:CDS | 40.0% |
| !!! | GAGTGTTTTGAGACCCCTTT+TGG | - | tig0010468:17479-17498 | None:intergenic | 45.0% |
| TATAGGTAGCACGAATGGTG+CGG | - | tig0010468:17555-17574 | None:intergenic | 45.0% | |
| CCATCACCAAAGGGTAGTAA+TGG | - | tig0010468:17585-17604 | None:intergenic | 45.0% | |
| CCATTACTACCCTTTGGTGA+TGG | + | tig0010468:17582-17601 | Msa1348430:CDS | 45.0% | |
| ATAAACGTCGTAGCCCACTT+GGG | - | tig0010468:17638-17657 | None:intergenic | 45.0% | |
| AATAAACGTCGTAGCCCACT+TGG | - | tig0010468:17639-17658 | None:intergenic | 45.0% | |
| !! | CGATAACGGAAAGGATGACT+GGG | - | tig0010468:17699-17718 | None:intergenic | 45.0% |
| !! | TCGATAACGGAAAGGATGAC+TGG | - | tig0010468:17700-17719 | None:intergenic | 45.0% |
| !!! | GGCAGTTTTCGATAACGGAA+AGG | - | tig0010468:17708-17727 | None:intergenic | 45.0% |
| GAATTTGCCGGCGAATTTGT+CGG | - | tig0010468:17776-17795 | None:intergenic | 45.0% | |
| CAACTTACCGGAAAATTGGG+TGG | + | tig0010468:17795-17814 | Msa1348430:CDS | 45.0% | |
| ! | AACATGGCAGTGGCTTTTGT+GGG | - | tig0010468:17853-17872 | None:intergenic | 45.0% |
| ! | AAACATGGCAGTGGCTTTTG+TGG | - | tig0010468:17854-17873 | None:intergenic | 45.0% |
| ! | GTAAGCGAGTGTCTGAAACA+TGG | - | tig0010468:17869-17888 | None:intergenic | 45.0% |
| ! | GCGAAACTTTTCACCATTCG+CGG | - | tig0010468:17965-17984 | None:intergenic | 45.0% |
| GCGAATGGTGAAAAGTTTCG+CGG | + | tig0010468:17964-17983 | Msa1348430:CDS | 45.0% | |
| GTTTCGCGGTAAAAAATGCG+TGG | + | tig0010468:17978-17997 | Msa1348430:CDS | 45.0% | |
| !! | TGAGTCTCCACGGGTTTTAT+CGG | - | tig0010468:18060-18079 | None:intergenic | 45.0% |
| AAACCAGGATACTCCAGAAC+GGG | - | tig0010468:18189-18208 | None:intergenic | 45.0% | |
| CAAACCAGGATACTCCAGAA+CGG | - | tig0010468:18190-18209 | None:intergenic | 45.0% | |
| !! | TGTTGATTCAAGTGAGCCAG+TGG | + | tig0010468:18323-18342 | Msa1348430:CDS | 45.0% |
| !!! | GGTTTTGGGTGTTGGGTTTT+CGG | + | tig0010468:18428-18447 | Msa1348430:CDS | 45.0% |
| !!! | GTTTTGGGTGTTGGGTTTTC+GGG | + | tig0010468:18429-18448 | Msa1348430:CDS | 45.0% |
| TTCGGGTCATGGGTTTAAGA+TGG | + | tig0010468:18446-18465 | Msa1348430:CDS | 45.0% | |
| ! | TCATGGGTTTAAGATGGCTC+CGG | + | tig0010468:18452-18471 | Msa1348430:CDS | 45.0% |
| ! | TTGACTCAACTTGTGGTGGA+TGG | + | tig0010468:18489-18508 | Msa1348430:CDS | 45.0% |
| !! | TGACTCAACTTGTGGTGGAT+GGG | + | tig0010468:18490-18509 | Msa1348430:CDS | 45.0% |
| !!! | GAGTGTTTTGAGACCCCTTT+TGG | - | tig0010468:17479-17498 | None:intergenic | 45.0% |
| TATAGGTAGCACGAATGGTG+CGG | - | tig0010468:17555-17574 | None:intergenic | 45.0% | |
| CCATCACCAAAGGGTAGTAA+TGG | - | tig0010468:17585-17604 | None:intergenic | 45.0% | |
| CCATTACTACCCTTTGGTGA+TGG | + | tig0010468:17582-17601 | Msa1348430:CDS | 45.0% | |
| ATAAACGTCGTAGCCCACTT+GGG | - | tig0010468:17638-17657 | None:intergenic | 45.0% | |
| AATAAACGTCGTAGCCCACT+TGG | - | tig0010468:17639-17658 | None:intergenic | 45.0% | |
| !! | CGATAACGGAAAGGATGACT+GGG | - | tig0010468:17699-17718 | None:intergenic | 45.0% |
| !! | TCGATAACGGAAAGGATGAC+TGG | - | tig0010468:17700-17719 | None:intergenic | 45.0% |
| !!! | GGCAGTTTTCGATAACGGAA+AGG | - | tig0010468:17708-17727 | None:intergenic | 45.0% |
| GAATTTGCCGGCGAATTTGT+CGG | - | tig0010468:17776-17795 | None:intergenic | 45.0% | |
| CAACTTACCGGAAAATTGGG+TGG | + | tig0010468:17795-17814 | Msa1348430:CDS | 45.0% | |
| ! | AACATGGCAGTGGCTTTTGT+GGG | - | tig0010468:17853-17872 | None:intergenic | 45.0% |
| ! | AAACATGGCAGTGGCTTTTG+TGG | - | tig0010468:17854-17873 | None:intergenic | 45.0% |
| ! | GTAAGCGAGTGTCTGAAACA+TGG | - | tig0010468:17869-17888 | None:intergenic | 45.0% |
| ! | GCGAAACTTTTCACCATTCG+CGG | - | tig0010468:17965-17984 | None:intergenic | 45.0% |
| GCGAATGGTGAAAAGTTTCG+CGG | + | tig0010468:17964-17983 | Msa1348430:CDS | 45.0% | |
| GTTTCGCGGTAAAAAATGCG+TGG | + | tig0010468:17978-17997 | Msa1348430:CDS | 45.0% | |
| !! | TGAGTCTCCACGGGTTTTAT+CGG | - | tig0010468:18060-18079 | None:intergenic | 45.0% |
| AAACCAGGATACTCCAGAAC+GGG | - | tig0010468:18189-18208 | None:intergenic | 45.0% | |
| CAAACCAGGATACTCCAGAA+CGG | - | tig0010468:18190-18209 | None:intergenic | 45.0% | |
| !! | TGTTGATTCAAGTGAGCCAG+TGG | + | tig0010468:18323-18342 | Msa1348430:CDS | 45.0% |
| !!! | GGTTTTGGGTGTTGGGTTTT+CGG | + | tig0010468:18428-18447 | Msa1348430:CDS | 45.0% |
| !!! | GTTTTGGGTGTTGGGTTTTC+GGG | + | tig0010468:18429-18448 | Msa1348430:CDS | 45.0% |
| TTCGGGTCATGGGTTTAAGA+TGG | + | tig0010468:18446-18465 | Msa1348430:CDS | 45.0% | |
| ! | TCATGGGTTTAAGATGGCTC+CGG | + | tig0010468:18452-18471 | Msa1348430:CDS | 45.0% |
| ! | TTGACTCAACTTGTGGTGGA+TGG | + | tig0010468:18489-18508 | Msa1348430:CDS | 45.0% |
| !! | TGACTCAACTTGTGGTGGAT+GGG | + | tig0010468:18490-18509 | Msa1348430:CDS | 45.0% |
| GATGTGATTATCGTCGGAGC+CGG | + | tig0010468:17421-17440 | Msa1348430:CDS | 50.0% | |
| ! | CCTTTTGGCAGCTTGGTAAG+CGG | - | tig0010468:17464-17483 | None:intergenic | 50.0% |
| CGCTTACCAAGCTGCCAAAA+GGG | + | tig0010468:17462-17481 | Msa1348430:CDS | 50.0% | |
| GCTTACCAAGCTGCCAAAAG+GGG | + | tig0010468:17463-17482 | Msa1348430:CDS | 50.0% | |
| ! | TTTGACTTTCTCCACCACCG+TGG | + | tig0010468:17511-17530 | Msa1348430:CDS | 50.0% |
| ATAGGTAGCACGAATGGTGC+GGG | - | tig0010468:17554-17573 | None:intergenic | 50.0% | |
| AAAGAAGCTCAGGCCCAAGT+GGG | + | tig0010468:17622-17641 | Msa1348430:CDS | 50.0% | |
| AAAGCCCAGCACCTTGACAT+GGG | + | tig0010468:17661-17680 | Msa1348430:CDS | 50.0% | |
| GGATGACTGGGTCGTTGAAT+GGG | - | tig0010468:17687-17706 | None:intergenic | 50.0% | |
| AGGATGACTGGGTCGTTGAA+TGG | - | tig0010468:17688-17707 | None:intergenic | 50.0% | |
| !! | ATTTGTCGGCAACTTGCTGG+TGG | - | tig0010468:17762-17781 | None:intergenic | 50.0% |
| CGAATTTGTCGGCAACTTGC+TGG | - | tig0010468:17765-17784 | None:intergenic | 50.0% | |
| CAAGTTGCCGACAAATTCGC+CGG | + | tig0010468:17766-17785 | Msa1348430:CDS | 50.0% | |
| CGCCGGCAAATTCAACTTAC+CGG | + | tig0010468:17783-17802 | Msa1348430:CDS | 50.0% | |
| ! | GACAAGCCCACCCAATTTTC+CGG | - | tig0010468:17805-17824 | None:intergenic | 50.0% |
| ! | GAGTGTCTGAAACATGGCAG+TGG | - | tig0010468:17863-17882 | None:intergenic | 50.0% |
| TGTATACGGAACACCCGTTC+TGG | + | tig0010468:18173-18192 | Msa1348430:CDS | 50.0% | |
| ! | TCCTGGTTTGATGAAAGCGG+CGG | + | tig0010468:18200-18219 | Msa1348430:CDS | 50.0% |
| TTGATGAAAGCGGCGGTTCA+CGG | + | tig0010468:18207-18226 | Msa1348430:CDS | 50.0% | |
| TGACCCTGATAAGAGACCGT+GGG | + | tig0010468:18242-18261 | Msa1348430:CDS | 50.0% | |
| AACCCCACGGTCTCTTATCA+GGG | - | tig0010468:18248-18267 | None:intergenic | 50.0% | |
| TGATAAGAGACCGTGGGGTT+CGG | + | tig0010468:18248-18267 | Msa1348430:CDS | 50.0% | |
| ATCATCACAACCGAACCCCA+CGG | - | tig0010468:18261-18280 | None:intergenic | 50.0% | |
| !!! | GTGTTGGGTTTTCGGGTCAT+GGG | + | tig0010468:18436-18455 | Msa1348430:CDS | 50.0% |
| !! | GACTCAACTTGTGGTGGATG+GGG | + | tig0010468:18491-18510 | Msa1348430:CDS | 50.0% |
| GATGTGATTATCGTCGGAGC+CGG | + | tig0010468:17421-17440 | Msa1348430:CDS | 50.0% | |
| ! | CCTTTTGGCAGCTTGGTAAG+CGG | - | tig0010468:17464-17483 | None:intergenic | 50.0% |
| CGCTTACCAAGCTGCCAAAA+GGG | + | tig0010468:17462-17481 | Msa1348430:CDS | 50.0% | |
| GCTTACCAAGCTGCCAAAAG+GGG | + | tig0010468:17463-17482 | Msa1348430:CDS | 50.0% | |
| ! | TTTGACTTTCTCCACCACCG+TGG | + | tig0010468:17511-17530 | Msa1348430:CDS | 50.0% |
| ATAGGTAGCACGAATGGTGC+GGG | - | tig0010468:17554-17573 | None:intergenic | 50.0% | |
| AAAGAAGCTCAGGCCCAAGT+GGG | + | tig0010468:17622-17641 | Msa1348430:CDS | 50.0% | |
| AAAGCCCAGCACCTTGACAT+GGG | + | tig0010468:17661-17680 | Msa1348430:CDS | 50.0% | |
| GGATGACTGGGTCGTTGAAT+GGG | - | tig0010468:17687-17706 | None:intergenic | 50.0% | |
| AGGATGACTGGGTCGTTGAA+TGG | - | tig0010468:17688-17707 | None:intergenic | 50.0% | |
| !! | ATTTGTCGGCAACTTGCTGG+TGG | - | tig0010468:17762-17781 | None:intergenic | 50.0% |
| CGAATTTGTCGGCAACTTGC+TGG | - | tig0010468:17765-17784 | None:intergenic | 50.0% | |
| CAAGTTGCCGACAAATTCGC+CGG | + | tig0010468:17766-17785 | Msa1348430:CDS | 50.0% | |
| CGCCGGCAAATTCAACTTAC+CGG | + | tig0010468:17783-17802 | Msa1348430:CDS | 50.0% | |
| ! | GACAAGCCCACCCAATTTTC+CGG | - | tig0010468:17805-17824 | None:intergenic | 50.0% |
| ! | GAGTGTCTGAAACATGGCAG+TGG | - | tig0010468:17863-17882 | None:intergenic | 50.0% |
| TGTATACGGAACACCCGTTC+TGG | + | tig0010468:18173-18192 | Msa1348430:CDS | 50.0% | |
| ! | TCCTGGTTTGATGAAAGCGG+CGG | + | tig0010468:18200-18219 | Msa1348430:CDS | 50.0% |
| TTGATGAAAGCGGCGGTTCA+CGG | + | tig0010468:18207-18226 | Msa1348430:CDS | 50.0% | |
| TGACCCTGATAAGAGACCGT+GGG | + | tig0010468:18242-18261 | Msa1348430:CDS | 50.0% | |
| AACCCCACGGTCTCTTATCA+GGG | - | tig0010468:18248-18267 | None:intergenic | 50.0% | |
| TGATAAGAGACCGTGGGGTT+CGG | + | tig0010468:18248-18267 | Msa1348430:CDS | 50.0% | |
| ATCATCACAACCGAACCCCA+CGG | - | tig0010468:18261-18280 | None:intergenic | 50.0% | |
| !!! | GTGTTGGGTTTTCGGGTCAT+GGG | + | tig0010468:18436-18455 | Msa1348430:CDS | 50.0% |
| !! | GACTCAACTTGTGGTGGATG+GGG | + | tig0010468:18491-18510 | Msa1348430:CDS | 50.0% |
| TTTGGCAGCTTGGTAAGCGG+TGG | - | tig0010468:17461-17480 | None:intergenic | 55.0% | |
| CCGCTTACCAAGCTGCCAAA+AGG | + | tig0010468:17461-17480 | Msa1348430:CDS | 55.0% | |
| ! | TGAGACCCCTTTTGGCAGCT+TGG | - | tig0010468:17471-17490 | None:intergenic | 55.0% |
| ATTCACCGTGGGAAGAGCCA+CGG | - | tig0010468:17531-17550 | None:intergenic | 55.0% | |
| AATGGTGCGGGATTCACCGT+GGG | - | tig0010468:17542-17561 | None:intergenic | 55.0% | |
| GAAAGAAGCTCAGGCCCAAG+TGG | + | tig0010468:17621-17640 | Msa1348430:CDS | 55.0% | |
| CAAAGCCCAGCACCTTGACA+TGG | + | tig0010468:17660-17679 | Msa1348430:CDS | 55.0% | |
| CGTTGAATGGGCCCATGTCA+AGG | - | tig0010468:17675-17694 | None:intergenic | 55.0% | |
| GTGGGCTTGTCCACTGAACA+CGG | + | tig0010468:17814-17833 | Msa1348430:CDS | 55.0% | |
| CAGTATGCCACCGTGTTCAG+TGG | - | tig0010468:17827-17846 | None:intergenic | 55.0% | |
| CGTGGTAACTGTTGGAGCGT+GGG | + | tig0010468:17996-18015 | Msa1348430:CDS | 55.0% | |
| !! | ACACCCGTTCTGGAGTATCC+TGG | + | tig0010468:18183-18202 | Msa1348430:CDS | 55.0% |
| ! | ACCGCCGCTTTCATCAAACC+AGG | - | tig0010468:18204-18223 | None:intergenic | 55.0% |
| GTGACCCTGATAAGAGACCG+TGG | + | tig0010468:18241-18260 | Msa1348430:CDS | 55.0% | |
| GACCCTGATAAGAGACCGTG+GGG | + | tig0010468:18243-18262 | Msa1348430:CDS | 55.0% | |
| GAACCCCACGGTCTCTTATC+AGG | - | tig0010468:18249-18268 | None:intergenic | 55.0% | |
| !!! | GGTGTTGGGTTTTCGGGTCA+TGG | + | tig0010468:18435-18454 | Msa1348430:CDS | 55.0% |
| GGTGGATGGGGAAACCAATG+AGG | + | tig0010468:18503-18522 | Msa1348430:CDS | 55.0% | |
| TTTGGCAGCTTGGTAAGCGG+TGG | - | tig0010468:17461-17480 | None:intergenic | 55.0% | |
| CCGCTTACCAAGCTGCCAAA+AGG | + | tig0010468:17461-17480 | Msa1348430:CDS | 55.0% | |
| ! | TGAGACCCCTTTTGGCAGCT+TGG | - | tig0010468:17471-17490 | None:intergenic | 55.0% |
| ATTCACCGTGGGAAGAGCCA+CGG | - | tig0010468:17531-17550 | None:intergenic | 55.0% | |
| AATGGTGCGGGATTCACCGT+GGG | - | tig0010468:17542-17561 | None:intergenic | 55.0% | |
| GAAAGAAGCTCAGGCCCAAG+TGG | + | tig0010468:17621-17640 | Msa1348430:CDS | 55.0% | |
| CAAAGCCCAGCACCTTGACA+TGG | + | tig0010468:17660-17679 | Msa1348430:CDS | 55.0% | |
| CGTTGAATGGGCCCATGTCA+AGG | - | tig0010468:17675-17694 | None:intergenic | 55.0% | |
| GTGGGCTTGTCCACTGAACA+CGG | + | tig0010468:17814-17833 | Msa1348430:CDS | 55.0% | |
| CAGTATGCCACCGTGTTCAG+TGG | - | tig0010468:17827-17846 | None:intergenic | 55.0% | |
| CGTGGTAACTGTTGGAGCGT+GGG | + | tig0010468:17996-18015 | Msa1348430:CDS | 55.0% | |
| !! | ACACCCGTTCTGGAGTATCC+TGG | + | tig0010468:18183-18202 | Msa1348430:CDS | 55.0% |
| ! | ACCGCCGCTTTCATCAAACC+AGG | - | tig0010468:18204-18223 | None:intergenic | 55.0% |
| GTGACCCTGATAAGAGACCG+TGG | + | tig0010468:18241-18260 | Msa1348430:CDS | 55.0% | |
| GACCCTGATAAGAGACCGTG+GGG | + | tig0010468:18243-18262 | Msa1348430:CDS | 55.0% | |
| GAACCCCACGGTCTCTTATC+AGG | - | tig0010468:18249-18268 | None:intergenic | 55.0% | |
| !!! | GGTGTTGGGTTTTCGGGTCA+TGG | + | tig0010468:18435-18454 | Msa1348430:CDS | 55.0% |
| GGTGGATGGGGAAACCAATG+AGG | + | tig0010468:18503-18522 | Msa1348430:CDS | 55.0% | |
| GGTGGAACTTCCCATGACGC+CGG | - | tig0010468:17443-17462 | None:intergenic | 60.0% | |
| GAATGGTGCGGGATTCACCG+TGG | - | tig0010468:17543-17562 | None:intergenic | 60.0% | |
| ! | TGGGCCCATGTCAAGGTGCT+GGG | - | tig0010468:17668-17687 | None:intergenic | 60.0% |
| ATGGGCCCATGTCAAGGTGC+TGG | - | tig0010468:17669-17688 | None:intergenic | 60.0% | |
| TGGTGGTTGAGGAGCTGGTG+GGG | - | tig0010468:17745-17764 | None:intergenic | 60.0% | |
| CTGGTGGTTGAGGAGCTGGT+GGG | - | tig0010468:17746-17765 | None:intergenic | 60.0% | |
| CTTGCTGGTGGTTGAGGAGC+TGG | - | tig0010468:17750-17769 | None:intergenic | 60.0% | |
| !! | CGGCAACTTGCTGGTGGTTG+AGG | - | tig0010468:17756-17775 | None:intergenic | 60.0% |
| GGCTTGTCCACTGAACACGG+TGG | + | tig0010468:17817-17836 | Msa1348430:CDS | 60.0% | |
| GCGTGGTAACTGTTGGAGCG+TGG | + | tig0010468:17995-18014 | Msa1348430:CDS | 60.0% | |
| ATGAAAGCGGCGGTTCACGG+TGG | + | tig0010468:18210-18229 | Msa1348430:CDS | 60.0% | |
| GGTGGAACTTCCCATGACGC+CGG | - | tig0010468:17443-17462 | None:intergenic | 60.0% | |
| GAATGGTGCGGGATTCACCG+TGG | - | tig0010468:17543-17562 | None:intergenic | 60.0% | |
| ! | TGGGCCCATGTCAAGGTGCT+GGG | - | tig0010468:17668-17687 | None:intergenic | 60.0% |
| ATGGGCCCATGTCAAGGTGC+TGG | - | tig0010468:17669-17688 | None:intergenic | 60.0% | |
| TGGTGGTTGAGGAGCTGGTG+GGG | - | tig0010468:17745-17764 | None:intergenic | 60.0% | |
| CTGGTGGTTGAGGAGCTGGT+GGG | - | tig0010468:17746-17765 | None:intergenic | 60.0% | |
| CTTGCTGGTGGTTGAGGAGC+TGG | - | tig0010468:17750-17769 | None:intergenic | 60.0% | |
| !! | CGGCAACTTGCTGGTGGTTG+AGG | - | tig0010468:17756-17775 | None:intergenic | 60.0% |
| GGCTTGTCCACTGAACACGG+TGG | + | tig0010468:17817-17836 | Msa1348430:CDS | 60.0% | |
| GCGTGGTAACTGTTGGAGCG+TGG | + | tig0010468:17995-18014 | Msa1348430:CDS | 60.0% | |
| ATGAAAGCGGCGGTTCACGG+TGG | + | tig0010468:18210-18229 | Msa1348430:CDS | 60.0% | |
| TATCGTCGGAGCCGGCGTCA+TGG | + | tig0010468:17429-17448 | Msa1348430:CDS | 65.0% | |
| ATCGTCGGAGCCGGCGTCAT+GGG | + | tig0010468:17430-17449 | Msa1348430:CDS | 65.0% | |
| CACCACCGTGGCTCTTCCCA+CGG | + | tig0010468:17523-17542 | Msa1348430:CDS | 65.0% | |
| GCTGGTGGTTGAGGAGCTGG+TGG | - | tig0010468:17747-17766 | None:intergenic | 65.0% | |
| AAGCGGCGGTTCACGGTGGT+CGG | + | tig0010468:18214-18233 | Msa1348430:CDS | 65.0% | |
| TATCGTCGGAGCCGGCGTCA+TGG | + | tig0010468:17429-17448 | Msa1348430:CDS | 65.0% | |
| ATCGTCGGAGCCGGCGTCAT+GGG | + | tig0010468:17430-17449 | Msa1348430:CDS | 65.0% | |
| CACCACCGTGGCTCTTCCCA+CGG | + | tig0010468:17523-17542 | Msa1348430:CDS | 65.0% | |
| GCTGGTGGTTGAGGAGCTGG+TGG | - | tig0010468:17747-17766 | None:intergenic | 65.0% | |
| AAGCGGCGGTTCACGGTGGT+CGG | + | tig0010468:18214-18233 | Msa1348430:CDS | 65.0% | |
| CGTGGGAAGAGCCACGGTGG+TGG | - | tig0010468:17525-17544 | None:intergenic | 70.0% | |
| CACCGTGGGAAGAGCCACGG+TGG | - | tig0010468:17528-17547 | None:intergenic | 70.0% | |
| CGTGGGAAGAGCCACGGTGG+TGG | - | tig0010468:17525-17544 | None:intergenic | 70.0% | |
| CACCGTGGGAAGAGCCACGG+TGG | - | tig0010468:17528-17547 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0010468 | gene | 17403 | 18578 | 17403 | ID=Msa1348430;Name=Msa1348430 |
| tig0010468 | mRNA | 17403 | 18578 | 17403 | ID=Msa1348430-mRNA-1;Parent=Msa1348430;Name=Msa1348430-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|391 |
| tig0010468 | exon | 17403 | 18578 | 17403 | ID=Msa1348430-mRNA-1:exon:6432;Parent=Msa1348430-mRNA-1 |
| tig0010468 | CDS | 17403 | 18578 | 17403 | ID=Msa1348430-mRNA-1:cds;Parent=Msa1348430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
