AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1004720


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1004720 MtrunA17_Chr7g0214801 97.826 460 7 2 1 460 1 457 0.0 924
Msa1004720 MtrunA17_Chr1g0195051 49.885 435 210 4 22 453 2 431 5.59e-150 435
Msa1004720 MtrunA17_Chr1g0180411 44.079 456 240 8 8 456 6 453 3.25e-129 383
Msa1004720 MtrunA17_Chr3g0145661 45.570 395 204 4 69 456 19 409 1.40e-126 374
Msa1004720 MtrunA17_Chr7g0272261 45.107 419 224 3 40 452 1 419 2.63e-124 369
Msa1004720 MtrunA17_Chr7g0264851 31.898 511 226 10 14 456 2 458 5.63e-87 275
Msa1004720 MtrunA17_Chr7g0264821 45.064 233 126 2 225 456 4 235 2.10e-71 227
Msa1004720 MtrunA17_Chr7g0264831 49.686 159 70 4 29 181 19 173 1.78e-41 147
Msa1004720 MtrunA17_Chr5g0421601 59.322 59 7 1 152 210 5 46 1.10e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1004720 AT5G47900.9 57.918 461 162 4 4 460 8 440 0.0 528
Msa1004720 AT5G47900.1 57.918 461 162 4 4 460 8 440 0.0 528
Msa1004720 AT5G47900.10 62.730 381 138 1 84 460 1 381 4.46e-174 493
Msa1004720 AT5G47900.8 58.374 406 137 4 4 405 8 385 1.78e-161 462
Msa1004720 AT5G47900.4 52.026 469 178 7 4 460 2 435 6.25e-159 457
Msa1004720 AT5G47900.7 53.499 443 137 5 4 405 8 422 1.10e-153 444
Msa1004720 AT5G47900.6 61.398 329 123 1 136 460 12 340 1.16e-142 412
Msa1004720 AT5G47900.2 58.689 351 113 4 1 347 5 327 2.09e-139 404
Msa1004720 AT5G27730.1 48.601 393 197 3 69 456 36 428 4.93e-129 382
Msa1004720 AT5G47900.11 60.547 256 97 1 209 460 1 256 1.19e-114 337
Msa1004720 AT5G27730.3 50.585 342 164 3 69 405 36 377 4.38e-114 341
Msa1004720 AT5G27730.4 52.218 293 136 2 69 357 36 328 3.00e-105 317
Msa1004720 AT5G47900.3 55.326 291 101 4 4 293 8 270 1.51e-101 305
Msa1004720 AT5G47900.5 54.422 294 102 4 4 293 8 273 1.22e-100 303
Msa1004720 AT5G27730.2 43.658 339 186 3 123 456 9 347 7.90e-95 291
Msa1004720 AT5G27730.5 45.139 288 153 3 123 405 9 296 3.64e-80 251

Find 112 sgRNAs with CRISPR-Local

Find 754 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCTCTTACTGTTTCT+TGG 0.131629 7_1:-2331366 None:intergenic
GGCATTGCCTTGGATTTATT+TGG 0.173138 7_1:+2337533 Msa1004720:CDS
TAAAATCCTTGAAGGAAAAT+TGG 0.184274 7_1:-2338141 None:intergenic
TGCCTCCTGATGCTCCTTCT+TGG 0.195149 7_1:+2336934 Msa1004720:CDS
TTACAGCTCTCTGTGAAATT+TGG 0.205026 7_1:+2335981 Msa1004720:CDS
TTTCTATATATAAAAGTAAA+AGG 0.235676 7_1:-2338743 None:intergenic
ATGATGCATATGATATATTT+TGG 0.259041 7_1:+2338696 Msa1004720:three_prime_UTR
TTGTCACAGCTAAAGTTAAT+TGG 0.267789 7_1:+2338457 Msa1004720:intron
GCTGCTGGCATTCTCTTTGC+TGG 0.289082 7_1:+2337691 Msa1004720:CDS
CGTGAAGATATCGTTAATTC+TGG 0.293626 7_1:+2336010 Msa1004720:CDS
TGAAGAGAATGATGAAGATT+TGG 0.304060 7_1:+2331663 Msa1004720:CDS
ATTTATCTTTGCTTGCTGTA+TGG 0.319433 7_1:+2336369 Msa1004720:CDS
GCGCTTAAGCTTCTTGCATT+AGG 0.338601 7_1:+2335364 Msa1004720:CDS
ACCTCTTGTCTTGTAGTATC+TGG 0.341845 7_1:+2337512 Msa1004720:CDS
TGCTTGGTTGGCTTGCATTA+TGG 0.344938 7_1:+2337216 Msa1004720:CDS
CTTTGCTGGAATATATTTGA+TGG 0.349023 7_1:+2337705 Msa1004720:CDS
GAATGATGAAGATTTGGAAA+TGG 0.359702 7_1:+2331669 Msa1004720:CDS
GATGCAAAGTACTCGATATA+TGG 0.361750 7_1:-2338805 None:intergenic
TGTCTCACTGCTGGTGCTGC+TGG 0.374086 7_1:+2337676 Msa1004720:CDS
GGAGAAGTTACATTTCTTCA+TGG 0.376788 7_1:+2338717 Msa1004720:three_prime_UTR
AATGATGAAGATTTGGAAAT+GGG 0.378578 7_1:+2331670 Msa1004720:CDS
CGCGTTAGTGATTTGACGTT+CGG 0.380117 7_1:+2335794 Msa1004720:CDS
TTTATCTTTGCTTGCTGTAT+GGG 0.383070 7_1:+2336370 Msa1004720:CDS
TGTTGGGAATTACCTTGAAA+TGG 0.386259 7_1:-2337251 None:intergenic
TTTGAAGCAGATAAGATTGA+TGG 0.388539 7_1:+2335823 Msa1004720:CDS
GATATCGATACTTTCTCAAA+AGG 0.392446 7_1:-2336039 None:intergenic
AGTCACCTTAAGAGTCCTTC+AGG 0.392641 7_1:-2336975 None:intergenic
ACAGGCGCCCGTGCATATAT+TGG 0.393241 7_1:-2336680 None:intergenic
GAAATTACAATGTTGTTATG+AGG 0.398185 7_1:-2338174 None:intergenic
CTTGAAGAAACAATGCAATA+TGG 0.399784 7_1:-2331454 None:intergenic
ACTCATGCAGCTTATGATAT+TGG 0.408037 7_1:+2334987 Msa1004720:intron
TTGATCCTGAAGGACTCTTA+AGG 0.410225 7_1:+2336970 Msa1004720:CDS
TGTAGTATCTGGCATTGCCT+TGG 0.412434 7_1:+2337523 Msa1004720:CDS
ACACTCACAGAAAATTTCAT+AGG 0.413861 7_1:-2336444 None:intergenic
CAGCTAAAGTTAATTGGAGT+TGG 0.414698 7_1:+2338463 Msa1004720:intron
AGTATAAATTCTCCTGACTA+TGG 0.416712 7_1:+2336906 Msa1004720:CDS
AAATTCCACCAACATTGCTT+TGG 0.420016 7_1:-2338585 None:intergenic
AAAATCCTTGAAGGAAAATT+GGG 0.421795 7_1:-2338140 None:intergenic
CAATGCAATATGGTAGGGTT+AGG 0.428226 7_1:-2331444 None:intergenic
TAATCTTTGTAGCTGAATCA+TGG 0.430117 7_1:-2331714 None:intergenic
GCAATTGTTACCTGCTTGGT+TGG 0.430215 7_1:+2337204 Msa1004720:CDS
GATCATTCCAACGACATTGC+AGG 0.438809 7_1:-2336618 None:intergenic
ATGATCGATCGTAGCTTGTT+GGG 0.449187 7_1:+2336635 Msa1004720:CDS
TGGGATGTACGTTCCCGATT+GGG 0.453793 7_1:+2336389 Msa1004720:CDS
AGTTATACTTGTCTCACTGC+TGG 0.456351 7_1:+2337667 Msa1004720:CDS
AATGATCGATCGTAGCTTGT+TGG 0.458059 7_1:+2336634 Msa1004720:CDS
TGACACCAAGAAGGAGCATC+AGG 0.462233 7_1:-2336939 None:intergenic
GGAGGCAATGGTCCATAGTC+AGG 0.466457 7_1:-2336918 None:intergenic
AATTTCATAGGTTCTGAAGA+TGG 0.472038 7_1:-2336432 None:intergenic
GTCGCATCAACTTTGCAAGA+TGG 0.475648 7_1:-2335322 None:intergenic
TGAGAAAGTATCGATATCAA+TGG 0.477114 7_1:+2336044 Msa1004720:CDS
TCATATTATTCTCCATTTCA+AGG 0.480946 7_1:+2337239 Msa1004720:CDS
TTCCCCAGTAAAATCCTTGA+AGG 0.485909 7_1:-2338149 None:intergenic
GGTTCTGAAGATGGTTCTGT+TGG 0.489976 7_1:-2336423 None:intergenic
GATGGCAATTGTTACCTGCT+TGG 0.491107 7_1:+2337200 Msa1004720:CDS
ATGATATTGGTGGATGATGC+TGG 0.492588 7_1:+2335000 Msa1004720:CDS
TGCTTGCAGGTTGATGTATG+TGG 0.492740 7_1:+2338036 Msa1004720:intron
GGTCCTCCTCATTAAGACAT+AGG 0.492880 7_1:-2338564 None:intergenic
AAGAAACAATGCAATATGGT+AGG 0.494291 7_1:-2331450 None:intergenic
ATATCGATACTTTCTCAAAA+GGG 0.495414 7_1:-2336038 None:intergenic
GTTTCACCTATGTCTTAATG+AGG 0.495589 7_1:+2338558 Msa1004720:three_prime_UTR
AAGAGTCCTTCAGGATCAAA+AGG 0.496523 7_1:-2336966 None:intergenic
AGCAACCGTTGAGAAGTTTG+AGG 0.498250 7_1:-2331823 None:intergenic
ATGGGATGTACGTTCCCGAT+TGG 0.499827 7_1:+2336388 Msa1004720:CDS
TGGAACTTCATACTCCCAAT+CGG 0.507436 7_1:-2336403 None:intergenic
TGGGTTTACAACATCTATAC+CGG 0.509722 7_1:+2336654 Msa1004720:CDS
CAAAGTTGATGCGACTAGAA+AGG 0.510229 7_1:+2335330 Msa1004720:CDS
GCTATTGTTAAACCATTCCA+TGG 0.518565 7_1:-2335051 None:intergenic
CTCAATCATTCTCCATGGAA+TGG 0.518820 7_1:+2335039 Msa1004720:CDS
ATGCATGCATGCCTATCCAT+TGG 0.532980 7_1:-2338083 None:intergenic
AAGATTGATGGGAATACTGC+AGG 0.547002 7_1:+2335835 Msa1004720:CDS
TTGAAGCAGATAAGATTGAT+GGG 0.548455 7_1:+2335824 Msa1004720:CDS
CATGGAGAATGATTGAGTGC+TGG 0.551745 7_1:-2335033 None:intergenic
GGACCAGCCTGCAATGTCGT+TGG 0.555369 7_1:+2336611 Msa1004720:CDS
GAGGAGGACCAAAGCAATGT+TGG 0.557492 7_1:+2338577 Msa1004720:three_prime_UTR
TATTGATAAAATCACCTACA+TGG 0.559841 7_1:+2338673 Msa1004720:three_prime_UTR
TGTGGAGTAAGAGGCGACAC+TGG 0.561390 7_1:+2336590 Msa1004720:CDS
TTGGAGTTGGATCATGAAGG+AGG 0.565228 7_1:+2338476 Msa1004720:exon
GGAAAATGTTGCAAGCTGCT+AGG 0.567015 7_1:-2338119 None:intergenic
TAGGTTAAATGTGGAGTAAG+AGG 0.567721 7_1:+2336581 Msa1004720:intron
GAAGGAGCATCAGGAGGCAA+TGG 0.569145 7_1:-2336930 None:intergenic
GGAACTTCATACTCCCAATC+GGG 0.571048 7_1:-2336402 None:intergenic
ATGGAATTATAGTTCAGTGA+TGG 0.571322 7_1:+2337182 Msa1004720:intron
GAGGACCAAAGCAATGTTGG+TGG 0.578128 7_1:+2338580 Msa1004720:three_prime_UTR
AGAAACAATGCAATATGGTA+GGG 0.578188 7_1:-2331449 None:intergenic
AATGTAAGATTCTAATTCTG+TGG 0.580044 7_1:-2337478 None:intergenic
CATGCAGCTTATGATATTGG+TGG 0.582042 7_1:+2334990 Msa1004720:intron
ATGGTTACCAAATAAATCCA+AGG 0.585044 7_1:-2337540 None:intergenic
ATTTATATAGTAGTAGATGG+TGG 0.586304 7_1:+2331582 Msa1004720:intron
CAGCACTCAATCATTCTCCA+TGG 0.586892 7_1:+2335034 Msa1004720:CDS
TAGTGATTTGACGTTCGGAG+TGG 0.588639 7_1:+2335799 Msa1004720:CDS
CCCGTGCATATATTGGTCTC+CGG 0.589463 7_1:-2336673 None:intergenic
ATCATATGCATCATCCATGT+AGG 0.591704 7_1:-2338687 None:intergenic
GGAGGAAGCAAATATGCTAG+TGG 0.593975 7_1:+2338494 Msa1004720:three_prime_UTR
ACAGAATTAGAATCTTACAT+TGG 0.594630 7_1:+2337480 Msa1004720:CDS
ATTCCAACGACATTGCAGGC+TGG 0.596770 7_1:-2336614 None:intergenic
ATAATGCAAGCCAACCAAGC+AGG 0.596844 7_1:-2337214 None:intergenic
GCCAGATACTACAAGACAAG+AGG 0.600740 7_1:-2337513 None:intergenic
GATACTACAAGACAAGAGGT+TGG 0.600915 7_1:-2337509 None:intergenic
TGCACTAGCATTCACATACA+AGG 0.605009 7_1:+2335113 Msa1004720:CDS
TCACCTATGTCTTAATGAGG+AGG 0.606864 7_1:+2338561 Msa1004720:three_prime_UTR
TAATTGGAGTTGGATCATGA+AGG 0.613374 7_1:+2338473 Msa1004720:CDS
CATTGGATGTCAGAGAATTG+CGG 0.615658 7_1:+2335946 Msa1004720:intron
AAAGGAGCTTGACACCAAGA+AGG 0.617752 7_1:-2336948 None:intergenic
ACCGGAGACCAATATATGCA+CGG 0.621670 7_1:+2336672 Msa1004720:CDS
AACAACCTCAAACTTCTCAA+CGG 0.626095 7_1:+2331818 Msa1004720:CDS
CCGGAGACCAATATATGCAC+GGG 0.629013 7_1:+2336673 Msa1004720:CDS
CTATAAAACTGTGAAAACAA+AGG 0.631948 7_1:+2331335 Msa1004720:five_prime_UTR
AACATGTGTTAGGTTAAATG+TGG 0.637640 7_1:+2336572 Msa1004720:intron
CACCAAGAAGGAGCATCAGG+AGG 0.654110 7_1:-2336936 None:intergenic
AGTTGATGCGACTAGAAAGG+CGG 0.689224 7_1:+2335333 Msa1004720:CDS
ATATTGGTGGATGATGCTGG+TGG 0.716550 7_1:+2335003 Msa1004720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAATAAAAAAATTT+AGG - chr7_1:2332303-2332322 None:intergenic 0.0%
!! TTTATAAAATAAAAAAATTT+AGG - chr7_1:2332303-2332322 None:intergenic 0.0%
!! ATTATTATCACTAAAAAATT+TGG - chr7_1:2332094-2332113 None:intergenic 10.0%
!! GAAAATATTAAAAAATATAG+AGG - chr7_1:2332835-2332854 None:intergenic 10.0%
!! AAAATTATAAAACAAGAAAT+AGG - chr7_1:2333116-2333135 None:intergenic 10.0%
!!! AAAATAGAACAATATTTTTT+TGG - chr7_1:2333218-2333237 None:intergenic 10.0%
!! TTTATTATATGATGATAAAA+AGG + chr7_1:2333697-2333716 Msa1004720:intron 10.0%
!! ATATGATAATATTACATATT+TGG - chr7_1:2333929-2333948 None:intergenic 10.0%
!!! AATATATTTTTATTTTTGGT+AGG + chr7_1:2333978-2333997 Msa1004720:intron 10.0%
!! TCATTATTTATTTATTTCAT+TGG + chr7_1:2335929-2335948 Msa1004720:intron 10.0%
!!! ATTATTTTTTTGAATATAAC+AGG + chr7_1:2336322-2336341 Msa1004720:intron 10.0%
!!! TTATTTTTTTGAATATAACA+GGG + chr7_1:2336323-2336342 Msa1004720:intron 10.0%
!! TTTCTATATATAAAAGTAAA+AGG - chr7_1:2338746-2338765 None:intergenic 10.0%
!! ATTATTATCACTAAAAAATT+TGG - chr7_1:2332094-2332113 None:intergenic 10.0%
!! GAAAATATTAAAAAATATAG+AGG - chr7_1:2332835-2332854 None:intergenic 10.0%
!! AAAATTATAAAACAAGAAAT+AGG - chr7_1:2333116-2333135 None:intergenic 10.0%
!!! AAAATAGAACAATATTTTTT+TGG - chr7_1:2333218-2333237 None:intergenic 10.0%
!! TTTATTATATGATGATAAAA+AGG + chr7_1:2333697-2333716 Msa1004720:intron 10.0%
!! ATATGATAATATTACATATT+TGG - chr7_1:2333929-2333948 None:intergenic 10.0%
!!! AATATATTTTTATTTTTGGT+AGG + chr7_1:2333978-2333997 Msa1004720:intron 10.0%
!! TCATTATTTATTTATTTCAT+TGG + chr7_1:2335929-2335948 Msa1004720:intron 10.0%
!!! ATTATTTTTTTGAATATAAC+AGG + chr7_1:2336322-2336341 Msa1004720:intron 10.0%
!!! TTATTTTTTTGAATATAACA+GGG + chr7_1:2336323-2336342 Msa1004720:intron 10.0%
!! TTTCTATATATAAAAGTAAA+AGG - chr7_1:2338746-2338765 None:intergenic 10.0%
!! TATATTTATATAGTAGTAGA+TGG + chr7_1:2331579-2331598 Msa1004720:intron 15.0%
!!! TATTTAGTTGATTTTGTTTT+AGG + chr7_1:2331943-2331962 Msa1004720:intron 15.0%
!! TTAGTGATGATTAATAAAAT+GGG + chr7_1:2332378-2332397 Msa1004720:intron 15.0%
!!! TTGTCAAAAAAAACATTTTT+TGG - chr7_1:2332763-2332782 None:intergenic 15.0%
!!! TATTTTTGCACAATTATAAT+GGG + chr7_1:2332878-2332897 Msa1004720:intron 15.0%
!!! ATATTGTGAAATTTTTTCAA+TGG - chr7_1:2333035-2333054 None:intergenic 15.0%
!! TAAGGAAACATATTTATTAT+TGG - chr7_1:2333147-2333166 None:intergenic 15.0%
!!! TTTTTCTGAAAAATTACTAA+GGG - chr7_1:2333290-2333309 None:intergenic 15.0%
!!! TTTTTTCTGAAAAATTACTA+AGG - chr7_1:2333291-2333310 None:intergenic 15.0%
!!! TCATTTTCTAAAATTATTAC+TGG + chr7_1:2334061-2334080 Msa1004720:intron 15.0%
!! GGTAAAGTTTATTTAATAAA+TGG + chr7_1:2334645-2334664 Msa1004720:intron 15.0%
!! TATCATAAAAGTTTATGTAT+AGG - chr7_1:2336189-2336208 None:intergenic 15.0%
!!! CAATTTAACTTCTTATATAT+TGG + chr7_1:2336521-2336540 Msa1004720:intron 15.0%
!! ATTATAACTGTAAATTCAAA+AGG - chr7_1:2336839-2336858 None:intergenic 15.0%
!! TTTGAATTTACAGTTATAAT+TGG + chr7_1:2336839-2336858 Msa1004720:intron 15.0%
!! TAATAAAAAACCAAAATGTT+GGG - chr7_1:2337270-2337289 None:intergenic 15.0%
!! TATCTTGAAGAATTTATTTA+CGG - chr7_1:2337838-2337857 None:intergenic 15.0%
!!! TTTTATCTTTGTTATAGAAA+TGG + chr7_1:2337910-2337929 Msa1004720:intron 15.0%
!! TAAAAAAATTACACAAACAT+GGG + chr7_1:2337980-2337999 Msa1004720:intron 15.0%
!!! ATTTTTTTTAAATCATGACT+TGG + chr7_1:2338389-2338408 Msa1004720:intron 15.0%
!! TATATTTATATAGTAGTAGA+TGG + chr7_1:2331579-2331598 Msa1004720:intron 15.0%
!!! TATTTAGTTGATTTTGTTTT+AGG + chr7_1:2331943-2331962 Msa1004720:intron 15.0%
!! TTAGTGATGATTAATAAAAT+GGG + chr7_1:2332378-2332397 Msa1004720:intron 15.0%
!!! TTGTCAAAAAAAACATTTTT+TGG - chr7_1:2332763-2332782 None:intergenic 15.0%
!!! TATTTTTGCACAATTATAAT+GGG + chr7_1:2332878-2332897 Msa1004720:intron 15.0%
!!! ATATTGTGAAATTTTTTCAA+TGG - chr7_1:2333035-2333054 None:intergenic 15.0%
!! TAAGGAAACATATTTATTAT+TGG - chr7_1:2333147-2333166 None:intergenic 15.0%
!!! TTTTTCTGAAAAATTACTAA+GGG - chr7_1:2333290-2333309 None:intergenic 15.0%
!!! TTTTTTCTGAAAAATTACTA+AGG - chr7_1:2333291-2333310 None:intergenic 15.0%
!!! TCATTTTCTAAAATTATTAC+TGG + chr7_1:2334061-2334080 Msa1004720:intron 15.0%
!! GGTAAAGTTTATTTAATAAA+TGG + chr7_1:2334645-2334664 Msa1004720:intron 15.0%
!! TATCATAAAAGTTTATGTAT+AGG - chr7_1:2336189-2336208 None:intergenic 15.0%
!!! CAATTTAACTTCTTATATAT+TGG + chr7_1:2336521-2336540 Msa1004720:intron 15.0%
!! ATTATAACTGTAAATTCAAA+AGG - chr7_1:2336839-2336858 None:intergenic 15.0%
!! TTTGAATTTACAGTTATAAT+TGG + chr7_1:2336839-2336858 Msa1004720:intron 15.0%
!! TAATAAAAAACCAAAATGTT+GGG - chr7_1:2337270-2337289 None:intergenic 15.0%
!! TATCTTGAAGAATTTATTTA+CGG - chr7_1:2337838-2337857 None:intergenic 15.0%
!!! TTTTATCTTTGTTATAGAAA+TGG + chr7_1:2337910-2337929 Msa1004720:intron 15.0%
!! TAAAAAAATTACACAAACAT+GGG + chr7_1:2337980-2337999 Msa1004720:intron 15.0%
!!! ATTTTTTTTAAATCATGACT+TGG + chr7_1:2338389-2338408 Msa1004720:intron 15.0%
!! AACTAAAAAGAAGCAAAATA+AGG - chr7_1:2331901-2331920 None:intergenic 20.0%
!! GTAGTAACATACAATAAATA+AGG + chr7_1:2332129-2332148 Msa1004720:intron 20.0%
!!! ATTTAGTTAATGGGTTTATT+AGG + chr7_1:2332326-2332345 Msa1004720:intron 20.0%
!!! TAGTTATTGCTAAATTTTGA+TGG + chr7_1:2332355-2332374 Msa1004720:intron 20.0%
!! GTTAGTGATGATTAATAAAA+TGG + chr7_1:2332377-2332396 Msa1004720:intron 20.0%
!! TAGTGATGATTAATAAAATG+GGG + chr7_1:2332379-2332398 Msa1004720:intron 20.0%
!! TTCTTGAGATTTAATAGATT+TGG + chr7_1:2332439-2332458 Msa1004720:intron 20.0%
!!! GTATTTTTGCACAATTATAA+TGG + chr7_1:2332877-2332896 Msa1004720:intron 20.0%
!! AAAATTATACAACAAAAACC+AGG - chr7_1:2333187-2333206 None:intergenic 20.0%
!!! CGTATATCTAGATATTTTTT+AGG + chr7_1:2333414-2333433 Msa1004720:intron 20.0%
!!! AACACTAGACATTTTTTATA+TGG + chr7_1:2333547-2333566 Msa1004720:intron 20.0%
!!! CATTTACAATAGTTTTTTGT+GGG - chr7_1:2333644-2333663 None:intergenic 20.0%
!!! AAAACTATTGTAAATGGATT+AGG + chr7_1:2333648-2333667 Msa1004720:intron 20.0%
!! CATACATCATTATCAAAAAA+AGG + chr7_1:2333737-2333756 Msa1004720:intron 20.0%
!! ATAGTAAAATGATATCATGA+AGG - chr7_1:2333892-2333911 None:intergenic 20.0%
!! ATTGGAAAATATAACATGAT+TGG - chr7_1:2334363-2334382 None:intergenic 20.0%
!!! ATCATGTTATATTTTCCAAT+TGG + chr7_1:2334363-2334382 Msa1004720:intron 20.0%
!! AAATATCAGTTAATTCCAAT+TGG - chr7_1:2334381-2334400 None:intergenic 20.0%
!!! TATTTGTCTTGTTTAAACTT+TGG + chr7_1:2334436-2334455 Msa1004720:intron 20.0%
!! GTAATTGAATTGAATGTAAT+AGG + chr7_1:2334670-2334689 Msa1004720:intron 20.0%
!! ATTTCATTTATTATTTGCCT+AGG - chr7_1:2334856-2334875 None:intergenic 20.0%
!! TAACTTATGATACTAATTGA+TGG + chr7_1:2334890-2334909 Msa1004720:intron 20.0%
!! AACTTATGATACTAATTGAT+GGG + chr7_1:2334891-2334910 Msa1004720:intron 20.0%
!! CCAACAATAAAAAGAAAAAA+TGG - chr7_1:2335090-2335109 None:intergenic 20.0%
!!! CCATTTTTTCTTTTTATTGT+TGG + chr7_1:2335087-2335106 Msa1004720:CDS 20.0%
!! TTTCACAAAATTTAAGCAAA+AGG - chr7_1:2335416-2335435 None:intergenic 20.0%
!!! GAGTTTTAGTTTCTTAATAT+AGG + chr7_1:2336086-2336105 Msa1004720:intron 20.0%
!! CTATATCATAAGATAAAACA+AGG - chr7_1:2336160-2336179 None:intergenic 20.0%
!! ATGAATTTAAACTTCCAAAT+AGG - chr7_1:2336492-2336511 None:intergenic 20.0%
!! TCATTGAAATTTATATAGCA+TGG + chr7_1:2337115-2337134 Msa1004720:intron 20.0%
!! AATTTATATAGCATGGTTTA+TGG + chr7_1:2337122-2337141 Msa1004720:intron 20.0%
!! GTAATAAAAAACCAAAATGT+TGG - chr7_1:2337271-2337290 None:intergenic 20.0%
!!! GGTTTTTTATTACTTTCTTT+AGG + chr7_1:2337278-2337297 Msa1004720:intron 20.0%
!!! TGGTTTTTTTAGTAGTTATA+TGG + chr7_1:2337930-2337949 Msa1004720:intron 20.0%
!! CTAAAAAAATTACACAAACA+TGG + chr7_1:2337979-2337998 Msa1004720:intron 20.0%
!!! GCAAGAGAAAATAATTTTAT+CGG - chr7_1:2338019-2338038 None:intergenic 20.0%
!!! CAATGTTTTAAAAATTGAAC+CGG - chr7_1:2338338-2338357 None:intergenic 20.0%
!!! TGATTTTATCAATAGATTAG+AGG - chr7_1:2338667-2338686 None:intergenic 20.0%
!!! ATGATGCATATGATATATTT+TGG + chr7_1:2338696-2338715 Msa1004720:three_prime_UTR 20.0%
!! AACTAAAAAGAAGCAAAATA+AGG - chr7_1:2331901-2331920 None:intergenic 20.0%
!! GTAGTAACATACAATAAATA+AGG + chr7_1:2332129-2332148 Msa1004720:intron 20.0%
!!! ATTTAGTTAATGGGTTTATT+AGG + chr7_1:2332326-2332345 Msa1004720:intron 20.0%
!!! TAGTTATTGCTAAATTTTGA+TGG + chr7_1:2332355-2332374 Msa1004720:intron 20.0%
!! GTTAGTGATGATTAATAAAA+TGG + chr7_1:2332377-2332396 Msa1004720:intron 20.0%
!! TAGTGATGATTAATAAAATG+GGG + chr7_1:2332379-2332398 Msa1004720:intron 20.0%
!! TTCTTGAGATTTAATAGATT+TGG + chr7_1:2332439-2332458 Msa1004720:intron 20.0%
!!! GTATTTTTGCACAATTATAA+TGG + chr7_1:2332877-2332896 Msa1004720:intron 20.0%
!! AAAATTATACAACAAAAACC+AGG - chr7_1:2333187-2333206 None:intergenic 20.0%
!!! CGTATATCTAGATATTTTTT+AGG + chr7_1:2333414-2333433 Msa1004720:intron 20.0%
!!! AACACTAGACATTTTTTATA+TGG + chr7_1:2333547-2333566 Msa1004720:intron 20.0%
!!! CATTTACAATAGTTTTTTGT+GGG - chr7_1:2333644-2333663 None:intergenic 20.0%
!!! AAAACTATTGTAAATGGATT+AGG + chr7_1:2333648-2333667 Msa1004720:intron 20.0%
!! CATACATCATTATCAAAAAA+AGG + chr7_1:2333737-2333756 Msa1004720:intron 20.0%
!! ATAGTAAAATGATATCATGA+AGG - chr7_1:2333892-2333911 None:intergenic 20.0%
!! ATTGGAAAATATAACATGAT+TGG - chr7_1:2334363-2334382 None:intergenic 20.0%
!!! ATCATGTTATATTTTCCAAT+TGG + chr7_1:2334363-2334382 Msa1004720:intron 20.0%
!! AAATATCAGTTAATTCCAAT+TGG - chr7_1:2334381-2334400 None:intergenic 20.0%
!!! TATTTGTCTTGTTTAAACTT+TGG + chr7_1:2334436-2334455 Msa1004720:intron 20.0%
!! GTAATTGAATTGAATGTAAT+AGG + chr7_1:2334670-2334689 Msa1004720:intron 20.0%
!! ATTTCATTTATTATTTGCCT+AGG - chr7_1:2334856-2334875 None:intergenic 20.0%
!! TAACTTATGATACTAATTGA+TGG + chr7_1:2334890-2334909 Msa1004720:intron 20.0%
!! AACTTATGATACTAATTGAT+GGG + chr7_1:2334891-2334910 Msa1004720:intron 20.0%
!! CCAACAATAAAAAGAAAAAA+TGG - chr7_1:2335090-2335109 None:intergenic 20.0%
!!! CCATTTTTTCTTTTTATTGT+TGG + chr7_1:2335087-2335106 Msa1004720:CDS 20.0%
!! TTTCACAAAATTTAAGCAAA+AGG - chr7_1:2335416-2335435 None:intergenic 20.0%
!!! GAGTTTTAGTTTCTTAATAT+AGG + chr7_1:2336086-2336105 Msa1004720:intron 20.0%
!! CTATATCATAAGATAAAACA+AGG - chr7_1:2336160-2336179 None:intergenic 20.0%
!! ATGAATTTAAACTTCCAAAT+AGG - chr7_1:2336492-2336511 None:intergenic 20.0%
!! TCATTGAAATTTATATAGCA+TGG + chr7_1:2337115-2337134 Msa1004720:intron 20.0%
!! AATTTATATAGCATGGTTTA+TGG + chr7_1:2337122-2337141 Msa1004720:intron 20.0%
!! GTAATAAAAAACCAAAATGT+TGG - chr7_1:2337271-2337290 None:intergenic 20.0%
!!! GGTTTTTTATTACTTTCTTT+AGG + chr7_1:2337278-2337297 Msa1004720:intron 20.0%
!!! TGGTTTTTTTAGTAGTTATA+TGG + chr7_1:2337930-2337949 Msa1004720:intron 20.0%
!! CTAAAAAAATTACACAAACA+TGG + chr7_1:2337979-2337998 Msa1004720:intron 20.0%
!!! GCAAGAGAAAATAATTTTAT+CGG - chr7_1:2338019-2338038 None:intergenic 20.0%
!!! CAATGTTTTAAAAATTGAAC+CGG - chr7_1:2338338-2338357 None:intergenic 20.0%
!!! TGATTTTATCAATAGATTAG+AGG - chr7_1:2338667-2338686 None:intergenic 20.0%
!!! ATGATGCATATGATATATTT+TGG + chr7_1:2338696-2338715 Msa1004720:three_prime_UTR 20.0%
!!! CTTTGTTTTCACAGTTTTAT+AGG - chr7_1:2331337-2331356 None:intergenic 25.0%
! CTATAAAACTGTGAAAACAA+AGG + chr7_1:2331335-2331354 Msa1004720:five_prime_UTR 25.0%
! ATTTATATAGTAGTAGATGG+TGG + chr7_1:2331582-2331601 Msa1004720:intron 25.0%
! AATGATGAAGATTTGGAAAT+GGG + chr7_1:2331670-2331689 Msa1004720:CDS 25.0%
! AAAAAGAAGCAAAATAAGGA+AGG - chr7_1:2331897-2331916 None:intergenic 25.0%
!!! TTGTTTTTTGTTTCCTTCAT+TGG + chr7_1:2332034-2332053 Msa1004720:intron 25.0%
! AAATAAGGTTTAACTCATGT+TGG + chr7_1:2332144-2332163 Msa1004720:intron 25.0%
! ATAACAATTTGATCACAAAG+AGG - chr7_1:2332688-2332707 None:intergenic 25.0%
! GAATTGTGAAACAAAAACTA+AGG - chr7_1:2333165-2333184 None:intergenic 25.0%
! CAATCATTGATATTACTCAT+AGG + chr7_1:2333323-2333342 Msa1004720:intron 25.0%
!!! GTTTATCATGCAACTTTTTT+AGG + chr7_1:2333382-2333401 Msa1004720:intron 25.0%
! CTTTATAAATGAATTTAGCG+CGG + chr7_1:2333479-2333498 Msa1004720:intron 25.0%
! TTTATAAATGAATTTAGCGC+GGG + chr7_1:2333480-2333499 Msa1004720:intron 25.0%
!! AAAACTACCTAATCTTGTTT+GGG - chr7_1:2333595-2333614 None:intergenic 25.0%
! TAAAACTACCTAATCTTGTT+TGG - chr7_1:2333596-2333615 None:intergenic 25.0%
!!! CCATTTACAATAGTTTTTTG+TGG - chr7_1:2333645-2333664 None:intergenic 25.0%
! CCACAAAAAACTATTGTAAA+TGG + chr7_1:2333642-2333661 Msa1004720:intron 25.0%
!! AGTAATCATAATTTTCCATG+AGG + chr7_1:2334181-2334200 Msa1004720:intron 25.0%
! AAACATTCTATAAGGCTAAA+AGG - chr7_1:2334272-2334291 None:intergenic 25.0%
!!! TTTTAGCCTTATAGAATGTT+TGG + chr7_1:2334271-2334290 Msa1004720:intron 25.0%
! GAATAGTTGAAGAAAGAAAA+AGG - chr7_1:2334326-2334345 None:intergenic 25.0%
! TAGTTTGAAAACGACAAATT+TGG + chr7_1:2334405-2334424 Msa1004720:intron 25.0%
!!! TGCATCGATAATTTACTTTT+AGG + chr7_1:2334505-2334524 Msa1004720:intron 25.0%
! GGCAAATATTAGTAATTTAG+TGG + chr7_1:2334526-2334545 Msa1004720:intron 25.0%
! ACACTTTCAATCTTAAGTAT+CGG + chr7_1:2334769-2334788 Msa1004720:intron 25.0%
! CAGTATAAATCAATGTAAGA+TGG - chr7_1:2334957-2334976 None:intergenic 25.0%
! CAAAATTTAAGCAAAAGGTT+CGG - chr7_1:2335411-2335430 None:intergenic 25.0%
!!! TCTTTTTTTGATGAATGTCA+AGG + chr7_1:2335473-2335492 Msa1004720:intron 25.0%
!! AAGGTGTTAAAGTAAAATGT+TGG + chr7_1:2335492-2335511 Msa1004720:intron 25.0%
!! TTAAAGTAAAATGTTGGTGA+TGG + chr7_1:2335498-2335517 Msa1004720:intron 25.0%
!!! TGTTATTTCACAACATATAC+AGG - chr7_1:2335541-2335560 None:intergenic 25.0%
! AATGCAATACATTACATACA+TGG - chr7_1:2335747-2335766 None:intergenic 25.0%
!! AATGAAGTTCTAACTTCATA+GGG - chr7_1:2335873-2335892 None:intergenic 25.0%
! ATATCGATACTTTCTCAAAA+GGG - chr7_1:2336041-2336060 None:intergenic 25.0%
!! TTTACATTTTCACACCTATT+TGG + chr7_1:2336475-2336494 Msa1004720:intron 25.0%
!! TTTTTAATAATCAGACGACT+AGG - chr7_1:2336795-2336814 None:intergenic 25.0%
!! GTGTAACTTTTTATTACAAC+AGG + chr7_1:2336878-2336897 Msa1004720:intron 25.0%
!! GAATTGCATTCTAAAAACAA+AGG - chr7_1:2337015-2337034 None:intergenic 25.0%
!!! CAAATAATTTGTTCATGTCA+AGG - chr7_1:2337093-2337112 None:intergenic 25.0%
!! CTCTAATTTTGTGTCTATTA+TGG + chr7_1:2337163-2337182 Msa1004720:intron 25.0%
! TCATATTATTCTCCATTTCA+AGG + chr7_1:2337239-2337258 Msa1004720:CDS 25.0%
! AGACTTTCAATATAAAGTGT+TGG + chr7_1:2337393-2337412 Msa1004720:intron 25.0%
! AATGTAAGATTCTAATTCTG+TGG - chr7_1:2337481-2337500 None:intergenic 25.0%
! ACAGAATTAGAATCTTACAT+TGG + chr7_1:2337480-2337499 Msa1004720:CDS 25.0%
! AAGAAAGAGTTAAGAGATAA+TGG - chr7_1:2337562-2337581 None:intergenic 25.0%
! ATAGCTTATATGAAAACAGT+TGG + chr7_1:2337881-2337900 Msa1004720:intron 25.0%
! AAAATCCTTGAAGGAAAATT+GGG - chr7_1:2338143-2338162 None:intergenic 25.0%
! TAAAATCCTTGAAGGAAAAT+TGG - chr7_1:2338144-2338163 None:intergenic 25.0%
! GAAATTACAATGTTGTTATG+AGG - chr7_1:2338177-2338196 None:intergenic 25.0%
! TTAGTAAATAACTGCAAAGT+GGG - chr7_1:2338206-2338225 None:intergenic 25.0%
! ATTAGTAAATAACTGCAAAG+TGG - chr7_1:2338207-2338226 None:intergenic 25.0%
!!! TGGTTCGATTTTTAAAACAT+TGG - chr7_1:2338235-2338254 None:intergenic 25.0%
!!! CTACAATTTTGTTTTTTGAG+CGG + chr7_1:2338278-2338297 Msa1004720:intron 25.0%
!!! CGGTTCAATTTTTAAAACAT+TGG + chr7_1:2338336-2338355 Msa1004720:intron 25.0%
!!! TGGAATTTTGAGAGAAATTT+TGG + chr7_1:2338600-2338619 Msa1004720:three_prime_UTR 25.0%
! TATTGATAAAATCACCTACA+TGG + chr7_1:2338673-2338692 Msa1004720:three_prime_UTR 25.0%
!!! CTTTGTTTTCACAGTTTTAT+AGG - chr7_1:2331337-2331356 None:intergenic 25.0%
! CTATAAAACTGTGAAAACAA+AGG + chr7_1:2331335-2331354 Msa1004720:five_prime_UTR 25.0%
! ATTTATATAGTAGTAGATGG+TGG + chr7_1:2331582-2331601 Msa1004720:intron 25.0%
! AATGATGAAGATTTGGAAAT+GGG + chr7_1:2331670-2331689 Msa1004720:CDS 25.0%
! AAAAAGAAGCAAAATAAGGA+AGG - chr7_1:2331897-2331916 None:intergenic 25.0%
!!! TTGTTTTTTGTTTCCTTCAT+TGG + chr7_1:2332034-2332053 Msa1004720:intron 25.0%
! AAATAAGGTTTAACTCATGT+TGG + chr7_1:2332144-2332163 Msa1004720:intron 25.0%
! ATAACAATTTGATCACAAAG+AGG - chr7_1:2332688-2332707 None:intergenic 25.0%
! GAATTGTGAAACAAAAACTA+AGG - chr7_1:2333165-2333184 None:intergenic 25.0%
! CAATCATTGATATTACTCAT+AGG + chr7_1:2333323-2333342 Msa1004720:intron 25.0%
!!! GTTTATCATGCAACTTTTTT+AGG + chr7_1:2333382-2333401 Msa1004720:intron 25.0%
! CTTTATAAATGAATTTAGCG+CGG + chr7_1:2333479-2333498 Msa1004720:intron 25.0%
! TTTATAAATGAATTTAGCGC+GGG + chr7_1:2333480-2333499 Msa1004720:intron 25.0%
!! AAAACTACCTAATCTTGTTT+GGG - chr7_1:2333595-2333614 None:intergenic 25.0%
! TAAAACTACCTAATCTTGTT+TGG - chr7_1:2333596-2333615 None:intergenic 25.0%
!!! CCATTTACAATAGTTTTTTG+TGG - chr7_1:2333645-2333664 None:intergenic 25.0%
! CCACAAAAAACTATTGTAAA+TGG + chr7_1:2333642-2333661 Msa1004720:intron 25.0%
!! AGTAATCATAATTTTCCATG+AGG + chr7_1:2334181-2334200 Msa1004720:intron 25.0%
! AAACATTCTATAAGGCTAAA+AGG - chr7_1:2334272-2334291 None:intergenic 25.0%
!!! TTTTAGCCTTATAGAATGTT+TGG + chr7_1:2334271-2334290 Msa1004720:intron 25.0%
! GAATAGTTGAAGAAAGAAAA+AGG - chr7_1:2334326-2334345 None:intergenic 25.0%
! TAGTTTGAAAACGACAAATT+TGG + chr7_1:2334405-2334424 Msa1004720:intron 25.0%
!!! TGCATCGATAATTTACTTTT+AGG + chr7_1:2334505-2334524 Msa1004720:intron 25.0%
! GGCAAATATTAGTAATTTAG+TGG + chr7_1:2334526-2334545 Msa1004720:intron 25.0%
! ACACTTTCAATCTTAAGTAT+CGG + chr7_1:2334769-2334788 Msa1004720:intron 25.0%
! CAGTATAAATCAATGTAAGA+TGG - chr7_1:2334957-2334976 None:intergenic 25.0%
! CAAAATTTAAGCAAAAGGTT+CGG - chr7_1:2335411-2335430 None:intergenic 25.0%
!!! TCTTTTTTTGATGAATGTCA+AGG + chr7_1:2335473-2335492 Msa1004720:intron 25.0%
!! AAGGTGTTAAAGTAAAATGT+TGG + chr7_1:2335492-2335511 Msa1004720:intron 25.0%
!! TTAAAGTAAAATGTTGGTGA+TGG + chr7_1:2335498-2335517 Msa1004720:intron 25.0%
!!! TGTTATTTCACAACATATAC+AGG - chr7_1:2335541-2335560 None:intergenic 25.0%
! AATGCAATACATTACATACA+TGG - chr7_1:2335747-2335766 None:intergenic 25.0%
!! AATGAAGTTCTAACTTCATA+GGG - chr7_1:2335873-2335892 None:intergenic 25.0%
! ATATCGATACTTTCTCAAAA+GGG - chr7_1:2336041-2336060 None:intergenic 25.0%
!! TTTACATTTTCACACCTATT+TGG + chr7_1:2336475-2336494 Msa1004720:intron 25.0%
!! TTTTTAATAATCAGACGACT+AGG - chr7_1:2336795-2336814 None:intergenic 25.0%
!! GTGTAACTTTTTATTACAAC+AGG + chr7_1:2336878-2336897 Msa1004720:intron 25.0%
!! GAATTGCATTCTAAAAACAA+AGG - chr7_1:2337015-2337034 None:intergenic 25.0%
!!! CAAATAATTTGTTCATGTCA+AGG - chr7_1:2337093-2337112 None:intergenic 25.0%
!! CTCTAATTTTGTGTCTATTA+TGG + chr7_1:2337163-2337182 Msa1004720:intron 25.0%
! TCATATTATTCTCCATTTCA+AGG + chr7_1:2337239-2337258 Msa1004720:CDS 25.0%
! AGACTTTCAATATAAAGTGT+TGG + chr7_1:2337393-2337412 Msa1004720:intron 25.0%
! AATGTAAGATTCTAATTCTG+TGG - chr7_1:2337481-2337500 None:intergenic 25.0%
! ACAGAATTAGAATCTTACAT+TGG + chr7_1:2337480-2337499 Msa1004720:CDS 25.0%
! AAGAAAGAGTTAAGAGATAA+TGG - chr7_1:2337562-2337581 None:intergenic 25.0%
! ATAGCTTATATGAAAACAGT+TGG + chr7_1:2337881-2337900 Msa1004720:intron 25.0%
! AAAATCCTTGAAGGAAAATT+GGG - chr7_1:2338143-2338162 None:intergenic 25.0%
! TAAAATCCTTGAAGGAAAAT+TGG - chr7_1:2338144-2338163 None:intergenic 25.0%
! GAAATTACAATGTTGTTATG+AGG - chr7_1:2338177-2338196 None:intergenic 25.0%
! TTAGTAAATAACTGCAAAGT+GGG - chr7_1:2338206-2338225 None:intergenic 25.0%
! ATTAGTAAATAACTGCAAAG+TGG - chr7_1:2338207-2338226 None:intergenic 25.0%
!!! TGGTTCGATTTTTAAAACAT+TGG - chr7_1:2338235-2338254 None:intergenic 25.0%
!!! CTACAATTTTGTTTTTTGAG+CGG + chr7_1:2338278-2338297 Msa1004720:intron 25.0%
!!! CGGTTCAATTTTTAAAACAT+TGG + chr7_1:2338336-2338355 Msa1004720:intron 25.0%
!!! TGGAATTTTGAGAGAAATTT+TGG + chr7_1:2338600-2338619 Msa1004720:three_prime_UTR 25.0%
! TATTGATAAAATCACCTACA+TGG + chr7_1:2338673-2338692 Msa1004720:three_prime_UTR 25.0%
AGAAACAATGCAATATGGTA+GGG - chr7_1:2331452-2331471 None:intergenic 30.0%
AAGAAACAATGCAATATGGT+AGG - chr7_1:2331453-2331472 None:intergenic 30.0%
CTTGAAGAAACAATGCAATA+TGG - chr7_1:2331457-2331476 None:intergenic 30.0%
TGAAGAGAATGATGAAGATT+TGG + chr7_1:2331663-2331682 Msa1004720:CDS 30.0%
GAATGATGAAGATTTGGAAA+TGG + chr7_1:2331669-2331688 Msa1004720:CDS 30.0%
TAATCTTTGTAGCTGAATCA+TGG - chr7_1:2331717-2331736 None:intergenic 30.0%
! TTGTTTCCTTCATTGGATTT+TGG + chr7_1:2332041-2332060 Msa1004720:intron 30.0%
! TGTTTCCTTCATTGGATTTT+GGG + chr7_1:2332042-2332061 Msa1004720:intron 30.0%
ACTAACGATCTTATGAGATA+CGG - chr7_1:2332180-2332199 None:intergenic 30.0%
TCAGATGTAAGTACATAGTT+AGG + chr7_1:2332212-2332231 Msa1004720:intron 30.0%
TAGGTACTTTGTACTTATGT+TGG + chr7_1:2332231-2332250 Msa1004720:intron 30.0%
TCAAGTAGTACCAACAAATT+GGG - chr7_1:2332473-2332492 None:intergenic 30.0%
!!! AGAGGTATCAACTAAGTTTT+CGG - chr7_1:2332817-2332836 None:intergenic 30.0%
TAAACGAACTCTACAAAACA+GGG - chr7_1:2332957-2332976 None:intergenic 30.0%
!!! ATATTCTGTTTTAGTGGACA+CGG - chr7_1:2333002-2333021 None:intergenic 30.0%
!! AGTTTTTGTTTCACAATTCC+TGG + chr7_1:2333166-2333185 Msa1004720:intron 30.0%
! TTTTGTGGGATTGTTAAGTT+GGG - chr7_1:2333630-2333649 None:intergenic 30.0%
! TTTTTGTGGGATTGTTAAGT+TGG - chr7_1:2333631-2333650 None:intergenic 30.0%
! AATGTATTGACACCAACATA+CGG + chr7_1:2334013-2334032 Msa1004720:intron 30.0%
! TTTCCATGAGGAAATGTTTT+AGG + chr7_1:2334193-2334212 Msa1004720:intron 30.0%
!! TTTTAGGTCTAGACATTGTT+TGG + chr7_1:2334209-2334228 Msa1004720:intron 30.0%
TGAAAACGACAAATTTGGTT+AGG + chr7_1:2334410-2334429 Msa1004720:intron 30.0%
TATGTTTGCTTTACACTATG+AGG + chr7_1:2334550-2334569 Msa1004720:intron 30.0%
TGCTATTCATTCTTAGACAA+CGG + chr7_1:2334624-2334643 Msa1004720:intron 30.0%
TCATTTATTATTTGCCTAGG+AGG - chr7_1:2334853-2334872 None:intergenic 30.0%
TTCTGTTCAAGAAACAGATA+AGG - chr7_1:2335301-2335320 None:intergenic 30.0%
TTGTGAAATAACAGCTATAG+CGG + chr7_1:2335548-2335567 Msa1004720:intron 30.0%
TAGTGTATCACAAAACAACA+GGG - chr7_1:2335607-2335626 None:intergenic 30.0%
ATAGTGTATCACAAAACAAC+AGG - chr7_1:2335608-2335627 None:intergenic 30.0%
! TTTGAAGCAGATAAGATTGA+TGG + chr7_1:2335823-2335842 Msa1004720:CDS 30.0%
TTGAAGCAGATAAGATTGAT+GGG + chr7_1:2335824-2335843 Msa1004720:CDS 30.0%
! CAATGAAGTTCTAACTTCAT+AGG - chr7_1:2335874-2335893 None:intergenic 30.0%
GATATCGATACTTTCTCAAA+AGG - chr7_1:2336042-2336061 None:intergenic 30.0%
!! TGAGAAAGTATCGATATCAA+TGG + chr7_1:2336044-2336063 Msa1004720:CDS 30.0%
! TTTTGAATATAACAGGGCTT+TGG + chr7_1:2336329-2336348 Msa1004720:intron 30.0%
!! ATTTATCTTTGCTTGCTGTA+TGG + chr7_1:2336369-2336388 Msa1004720:CDS 30.0%
!! TTTATCTTTGCTTGCTGTAT+GGG + chr7_1:2336370-2336389 Msa1004720:CDS 30.0%
!! AATTTCATAGGTTCTGAAGA+TGG - chr7_1:2336435-2336454 None:intergenic 30.0%
ACACTCACAGAAAATTTCAT+AGG - chr7_1:2336447-2336466 None:intergenic 30.0%
TATCTATCTGAACATGTGTT+AGG + chr7_1:2336562-2336581 Msa1004720:intron 30.0%
AACATGTGTTAGGTTAAATG+TGG + chr7_1:2336572-2336591 Msa1004720:intron 30.0%
AATTGGTTGTAAGTTGTTGA+CGG + chr7_1:2336856-2336875 Msa1004720:intron 30.0%
AGTATAAATTCTCCTGACTA+TGG + chr7_1:2336906-2336925 Msa1004720:CDS 30.0%
TTCTCGATATGAAGGAAAAT+TGG + chr7_1:2337032-2337051 Msa1004720:intron 30.0%
ATGGAATTATAGTTCAGTGA+TGG + chr7_1:2337182-2337201 Msa1004720:intron 30.0%
TTCCTTATATTGCTAAATGC+AGG + chr7_1:2337454-2337473 Msa1004720:intron 30.0%
ATGGTTACCAAATAAATCCA+AGG - chr7_1:2337543-2337562 None:intergenic 30.0%
! ATAAGCTCTTGTTGTAATGT+AGG + chr7_1:2337613-2337632 Msa1004720:intron 30.0%
CTTTGCTGGAATATATTTGA+TGG + chr7_1:2337705-2337724 Msa1004720:CDS 30.0%
TAGTAATAACTCTTCTGCAT+TGG + chr7_1:2337729-2337748 Msa1004720:intron 30.0%
GCTTATGACATGTTCATAAA+CGG + chr7_1:2337798-2337817 Msa1004720:intron 30.0%
! AATTATTTTCTCTTGCTTGC+AGG + chr7_1:2338023-2338042 Msa1004720:intron 30.0%
! ACTTCAATTTTCCAATGGAT+AGG + chr7_1:2338072-2338091 Msa1004720:CDS 30.0%
! ATTTTCCCAATTTTCCTTCA+AGG + chr7_1:2338135-2338154 Msa1004720:CDS 30.0%
! TTTTCCTTCAAGGATTTTAC+TGG + chr7_1:2338145-2338164 Msa1004720:CDS 30.0%
! TTTCCTTCAAGGATTTTACT+GGG + chr7_1:2338146-2338165 Msa1004720:CDS 30.0%
ATGTTTGTTCAAGGTTTAAC+TGG - chr7_1:2338255-2338274 None:intergenic 30.0%
TTGTAGACAATGTTTGTTCA+AGG - chr7_1:2338264-2338283 None:intergenic 30.0%
TTATTAGCGCATGAAAAATG+TGG - chr7_1:2338415-2338434 None:intergenic 30.0%
TTGTCACAGCTAAAGTTAAT+TGG + chr7_1:2338457-2338476 Msa1004720:intron 30.0%
AGAAACAATGCAATATGGTA+GGG - chr7_1:2331452-2331471 None:intergenic 30.0%
AAGAAACAATGCAATATGGT+AGG - chr7_1:2331453-2331472 None:intergenic 30.0%
CTTGAAGAAACAATGCAATA+TGG - chr7_1:2331457-2331476 None:intergenic 30.0%
TGAAGAGAATGATGAAGATT+TGG + chr7_1:2331663-2331682 Msa1004720:CDS 30.0%
GAATGATGAAGATTTGGAAA+TGG + chr7_1:2331669-2331688 Msa1004720:CDS 30.0%
TAATCTTTGTAGCTGAATCA+TGG - chr7_1:2331717-2331736 None:intergenic 30.0%
! TTGTTTCCTTCATTGGATTT+TGG + chr7_1:2332041-2332060 Msa1004720:intron 30.0%
! TGTTTCCTTCATTGGATTTT+GGG + chr7_1:2332042-2332061 Msa1004720:intron 30.0%
ACTAACGATCTTATGAGATA+CGG - chr7_1:2332180-2332199 None:intergenic 30.0%
TCAGATGTAAGTACATAGTT+AGG + chr7_1:2332212-2332231 Msa1004720:intron 30.0%
TAGGTACTTTGTACTTATGT+TGG + chr7_1:2332231-2332250 Msa1004720:intron 30.0%
TCAAGTAGTACCAACAAATT+GGG - chr7_1:2332473-2332492 None:intergenic 30.0%
!!! AGAGGTATCAACTAAGTTTT+CGG - chr7_1:2332817-2332836 None:intergenic 30.0%
TAAACGAACTCTACAAAACA+GGG - chr7_1:2332957-2332976 None:intergenic 30.0%
!!! ATATTCTGTTTTAGTGGACA+CGG - chr7_1:2333002-2333021 None:intergenic 30.0%
!! AGTTTTTGTTTCACAATTCC+TGG + chr7_1:2333166-2333185 Msa1004720:intron 30.0%
! TTTTGTGGGATTGTTAAGTT+GGG - chr7_1:2333630-2333649 None:intergenic 30.0%
! TTTTTGTGGGATTGTTAAGT+TGG - chr7_1:2333631-2333650 None:intergenic 30.0%
! AATGTATTGACACCAACATA+CGG + chr7_1:2334013-2334032 Msa1004720:intron 30.0%
! TTTCCATGAGGAAATGTTTT+AGG + chr7_1:2334193-2334212 Msa1004720:intron 30.0%
!! TTTTAGGTCTAGACATTGTT+TGG + chr7_1:2334209-2334228 Msa1004720:intron 30.0%
TGAAAACGACAAATTTGGTT+AGG + chr7_1:2334410-2334429 Msa1004720:intron 30.0%
TATGTTTGCTTTACACTATG+AGG + chr7_1:2334550-2334569 Msa1004720:intron 30.0%
TGCTATTCATTCTTAGACAA+CGG + chr7_1:2334624-2334643 Msa1004720:intron 30.0%
TCATTTATTATTTGCCTAGG+AGG - chr7_1:2334853-2334872 None:intergenic 30.0%
TTCTGTTCAAGAAACAGATA+AGG - chr7_1:2335301-2335320 None:intergenic 30.0%
TTGTGAAATAACAGCTATAG+CGG + chr7_1:2335548-2335567 Msa1004720:intron 30.0%
TAGTGTATCACAAAACAACA+GGG - chr7_1:2335607-2335626 None:intergenic 30.0%
ATAGTGTATCACAAAACAAC+AGG - chr7_1:2335608-2335627 None:intergenic 30.0%
! TTTGAAGCAGATAAGATTGA+TGG + chr7_1:2335823-2335842 Msa1004720:CDS 30.0%
TTGAAGCAGATAAGATTGAT+GGG + chr7_1:2335824-2335843 Msa1004720:CDS 30.0%
! CAATGAAGTTCTAACTTCAT+AGG - chr7_1:2335874-2335893 None:intergenic 30.0%
GATATCGATACTTTCTCAAA+AGG - chr7_1:2336042-2336061 None:intergenic 30.0%
!! TGAGAAAGTATCGATATCAA+TGG + chr7_1:2336044-2336063 Msa1004720:CDS 30.0%
! TTTTGAATATAACAGGGCTT+TGG + chr7_1:2336329-2336348 Msa1004720:intron 30.0%
!! ATTTATCTTTGCTTGCTGTA+TGG + chr7_1:2336369-2336388 Msa1004720:CDS 30.0%
!! TTTATCTTTGCTTGCTGTAT+GGG + chr7_1:2336370-2336389 Msa1004720:CDS 30.0%
!! AATTTCATAGGTTCTGAAGA+TGG - chr7_1:2336435-2336454 None:intergenic 30.0%
ACACTCACAGAAAATTTCAT+AGG - chr7_1:2336447-2336466 None:intergenic 30.0%
TATCTATCTGAACATGTGTT+AGG + chr7_1:2336562-2336581 Msa1004720:intron 30.0%
AACATGTGTTAGGTTAAATG+TGG + chr7_1:2336572-2336591 Msa1004720:intron 30.0%
AATTGGTTGTAAGTTGTTGA+CGG + chr7_1:2336856-2336875 Msa1004720:intron 30.0%
AGTATAAATTCTCCTGACTA+TGG + chr7_1:2336906-2336925 Msa1004720:CDS 30.0%
TTCTCGATATGAAGGAAAAT+TGG + chr7_1:2337032-2337051 Msa1004720:intron 30.0%
ATGGAATTATAGTTCAGTGA+TGG + chr7_1:2337182-2337201 Msa1004720:intron 30.0%
TTCCTTATATTGCTAAATGC+AGG + chr7_1:2337454-2337473 Msa1004720:intron 30.0%
ATGGTTACCAAATAAATCCA+AGG - chr7_1:2337543-2337562 None:intergenic 30.0%
! ATAAGCTCTTGTTGTAATGT+AGG + chr7_1:2337613-2337632 Msa1004720:intron 30.0%
CTTTGCTGGAATATATTTGA+TGG + chr7_1:2337705-2337724 Msa1004720:CDS 30.0%
TAGTAATAACTCTTCTGCAT+TGG + chr7_1:2337729-2337748 Msa1004720:intron 30.0%
GCTTATGACATGTTCATAAA+CGG + chr7_1:2337798-2337817 Msa1004720:intron 30.0%
! AATTATTTTCTCTTGCTTGC+AGG + chr7_1:2338023-2338042 Msa1004720:intron 30.0%
! ACTTCAATTTTCCAATGGAT+AGG + chr7_1:2338072-2338091 Msa1004720:CDS 30.0%
! ATTTTCCCAATTTTCCTTCA+AGG + chr7_1:2338135-2338154 Msa1004720:CDS 30.0%
! TTTTCCTTCAAGGATTTTAC+TGG + chr7_1:2338145-2338164 Msa1004720:CDS 30.0%
! TTTCCTTCAAGGATTTTACT+GGG + chr7_1:2338146-2338165 Msa1004720:CDS 30.0%
ATGTTTGTTCAAGGTTTAAC+TGG - chr7_1:2338255-2338274 None:intergenic 30.0%
TTGTAGACAATGTTTGTTCA+AGG - chr7_1:2338264-2338283 None:intergenic 30.0%
TTATTAGCGCATGAAAAATG+TGG - chr7_1:2338415-2338434 None:intergenic 30.0%
TTGTCACAGCTAAAGTTAAT+TGG + chr7_1:2338457-2338476 Msa1004720:intron 30.0%
! CTTCTTCTCTTACTGTTTCT+TGG - chr7_1:2331369-2331388 None:intergenic 35.0%
AACAACCTCAAACTTCTCAA+CGG + chr7_1:2331818-2331837 Msa1004720:CDS 35.0%
! CTTTCACTTGATGTTTTTCG+TGG + chr7_1:2331844-2331863 Msa1004720:CDS 35.0%
TTAACTCATGTTGGTCAAGT+TGG + chr7_1:2332153-2332172 Msa1004720:intron 35.0%
GTCAAGTAGTACCAACAAAT+TGG - chr7_1:2332474-2332493 None:intergenic 35.0%
CGTAATGGTATGTAAATGGA+CGG - chr7_1:2332657-2332676 None:intergenic 35.0%
CGTCCATTTACATACCATTA+CGG + chr7_1:2332655-2332674 Msa1004720:intron 35.0%
TAGCCGTAATGGTATGTAAA+TGG - chr7_1:2332661-2332680 None:intergenic 35.0%
AAACGAACTCTACAAAACAG+GGG - chr7_1:2332956-2332975 None:intergenic 35.0%
GTAAACGAACTCTACAAAAC+AGG - chr7_1:2332958-2332977 None:intergenic 35.0%
GTGTCCACTAAAACAGAATA+TGG + chr7_1:2333001-2333020 Msa1004720:intron 35.0%
!! GTAGCCATATTCTGTTTTAG+TGG - chr7_1:2333008-2333027 None:intergenic 35.0%
! TTTGTGGGATTGTTAAGTTG+GGG - chr7_1:2333629-2333648 None:intergenic 35.0%
CTAACCAACTACACGTTATT+AGG - chr7_1:2333766-2333785 None:intergenic 35.0%
!! TCACCATGTTGCTTTATCAT+TGG + chr7_1:2333817-2333836 Msa1004720:intron 35.0%
!! CACCATGTTGCTTTATCATT+GGG + chr7_1:2333818-2333837 Msa1004720:intron 35.0%
TTCCCAATGATAAAGCAACA+TGG - chr7_1:2333823-2333842 None:intergenic 35.0%
GAAATGACATTGAAACGCAA+TGG + chr7_1:2333840-2333859 Msa1004720:intron 35.0%
ATGAAGCACGAACACATATA+CGG - chr7_1:2334119-2334138 None:intergenic 35.0%
TGTTAGAAGTTGCATGCAAA+AGG - chr7_1:2334156-2334175 None:intergenic 35.0%
TTGCATGCAACTTCTAACAT+TGG + chr7_1:2334157-2334176 Msa1004720:intron 35.0%
AGACCTAAAACATTTCCTCA+TGG - chr7_1:2334199-2334218 None:intergenic 35.0%
TTATCCATGCCAGTTTCATT+AGG - chr7_1:2334239-2334258 None:intergenic 35.0%
! GAAGCACCAAACATTCTATA+AGG - chr7_1:2334280-2334299 None:intergenic 35.0%
!! GTCTTGTTTAAACTTTGGTC+TGG + chr7_1:2334441-2334460 Msa1004720:intron 35.0%
AACTTTGGTCTGGTGTAATT+TGG + chr7_1:2334451-2334470 Msa1004720:intron 35.0%
!!! GGAGTTTTAAACGTGAAGTT+TGG - chr7_1:2334823-2334842 None:intergenic 35.0%
! CTTCACGTTTAAAACTCCTT+TGG + chr7_1:2334825-2334844 Msa1004720:intron 35.0%
ACTCATGCAGCTTATGATAT+TGG + chr7_1:2334987-2335006 Msa1004720:intron 35.0%
GCTATTGTTAAACCATTCCA+TGG - chr7_1:2335054-2335073 None:intergenic 35.0%
! GCATTAGGCATTTTTCTTCA+AGG + chr7_1:2335379-2335398 Msa1004720:CDS 35.0%
! ATTTAAGCAAAAGGTTCGGT+TGG - chr7_1:2335407-2335426 None:intergenic 35.0%
! TTGACGGTTTGTTCAAATTC+CGG - chr7_1:2335687-2335706 None:intergenic 35.0%
CGATCTACGATTGACAAAAT+TGG + chr7_1:2335713-2335732 Msa1004720:intron 35.0%
!! TATTGCATTTTGTCGTTTGC+AGG + chr7_1:2335758-2335777 Msa1004720:intron 35.0%
TTACAGCTCTCTGTGAAATT+TGG + chr7_1:2335981-2336000 Msa1004720:CDS 35.0%
CGTGAAGATATCGTTAATTC+TGG + chr7_1:2336010-2336029 Msa1004720:CDS 35.0%
GACTTGAGACACAAGTTAAA+GGG - chr7_1:2336278-2336297 None:intergenic 35.0%
TGACTTGAGACACAAGTTAA+AGG - chr7_1:2336279-2336298 None:intergenic 35.0%
!! TTAACTTGTGTCTCAAGTCA+TGG + chr7_1:2336279-2336298 Msa1004720:intron 35.0%
TAGGTTAAATGTGGAGTAAG+AGG + chr7_1:2336581-2336600 Msa1004720:intron 35.0%
TGGGTTTACAACATCTATAC+CGG + chr7_1:2336654-2336673 Msa1004720:CDS 35.0%
! AAGAGTATAGAGGATCATAC+AGG - chr7_1:2336701-2336720 None:intergenic 35.0%
! CAGAACAACTAAGAGTATAG+AGG - chr7_1:2336711-2336730 None:intergenic 35.0%
GAATGCAATTCTCGATATGA+AGG + chr7_1:2337024-2337043 Msa1004720:intron 35.0%
TGTTGGGAATTACCTTGAAA+TGG - chr7_1:2337254-2337273 None:intergenic 35.0%
! CAAGGTAATTCCCAACATTT+TGG + chr7_1:2337257-2337276 Msa1004720:intron 35.0%
! ATTACATTTGAAAGCGTGTC+TGG - chr7_1:2337341-2337360 None:intergenic 35.0%
TGTAATCACATGTATCGTGT+CGG + chr7_1:2337355-2337374 Msa1004720:intron 35.0%
GTCCTGCATTTAGCAATATA+AGG - chr7_1:2337459-2337478 None:intergenic 35.0%
! GCATGACTTCAATTTTCCAA+TGG + chr7_1:2338067-2338086 Msa1004720:CDS 35.0%
! TTCCTTCAAGGATTTTACTG+GGG + chr7_1:2338147-2338166 Msa1004720:CDS 35.0%
CAGCTAAAGTTAATTGGAGT+TGG + chr7_1:2338463-2338482 Msa1004720:intron 35.0%
TAATTGGAGTTGGATCATGA+AGG + chr7_1:2338473-2338492 Msa1004720:CDS 35.0%
GTTTCACCTATGTCTTAATG+AGG + chr7_1:2338558-2338577 Msa1004720:three_prime_UTR 35.0%
AAATTCCACCAACATTGCTT+TGG - chr7_1:2338588-2338607 None:intergenic 35.0%
!!! TTTGAGAGAAATTTTGGAGC+TGG + chr7_1:2338606-2338625 Msa1004720:three_prime_UTR 35.0%
ATCATATGCATCATCCATGT+AGG - chr7_1:2338690-2338709 None:intergenic 35.0%
GGAGAAGTTACATTTCTTCA+TGG + chr7_1:2338717-2338736 Msa1004720:three_prime_UTR 35.0%
! GATGCAAAGTACTCGATATA+TGG - chr7_1:2338808-2338827 None:intergenic 35.0%
! CTTCTTCTCTTACTGTTTCT+TGG - chr7_1:2331369-2331388 None:intergenic 35.0%
AACAACCTCAAACTTCTCAA+CGG + chr7_1:2331818-2331837 Msa1004720:CDS 35.0%
! CTTTCACTTGATGTTTTTCG+TGG + chr7_1:2331844-2331863 Msa1004720:CDS 35.0%
TTAACTCATGTTGGTCAAGT+TGG + chr7_1:2332153-2332172 Msa1004720:intron 35.0%
GTCAAGTAGTACCAACAAAT+TGG - chr7_1:2332474-2332493 None:intergenic 35.0%
CGTAATGGTATGTAAATGGA+CGG - chr7_1:2332657-2332676 None:intergenic 35.0%
CGTCCATTTACATACCATTA+CGG + chr7_1:2332655-2332674 Msa1004720:intron 35.0%
TAGCCGTAATGGTATGTAAA+TGG - chr7_1:2332661-2332680 None:intergenic 35.0%
AAACGAACTCTACAAAACAG+GGG - chr7_1:2332956-2332975 None:intergenic 35.0%
GTAAACGAACTCTACAAAAC+AGG - chr7_1:2332958-2332977 None:intergenic 35.0%
GTGTCCACTAAAACAGAATA+TGG + chr7_1:2333001-2333020 Msa1004720:intron 35.0%
!! GTAGCCATATTCTGTTTTAG+TGG - chr7_1:2333008-2333027 None:intergenic 35.0%
! TTTGTGGGATTGTTAAGTTG+GGG - chr7_1:2333629-2333648 None:intergenic 35.0%
CTAACCAACTACACGTTATT+AGG - chr7_1:2333766-2333785 None:intergenic 35.0%
!! TCACCATGTTGCTTTATCAT+TGG + chr7_1:2333817-2333836 Msa1004720:intron 35.0%
!! CACCATGTTGCTTTATCATT+GGG + chr7_1:2333818-2333837 Msa1004720:intron 35.0%
TTCCCAATGATAAAGCAACA+TGG - chr7_1:2333823-2333842 None:intergenic 35.0%
GAAATGACATTGAAACGCAA+TGG + chr7_1:2333840-2333859 Msa1004720:intron 35.0%
ATGAAGCACGAACACATATA+CGG - chr7_1:2334119-2334138 None:intergenic 35.0%
TGTTAGAAGTTGCATGCAAA+AGG - chr7_1:2334156-2334175 None:intergenic 35.0%
TTGCATGCAACTTCTAACAT+TGG + chr7_1:2334157-2334176 Msa1004720:intron 35.0%
AGACCTAAAACATTTCCTCA+TGG - chr7_1:2334199-2334218 None:intergenic 35.0%
TTATCCATGCCAGTTTCATT+AGG - chr7_1:2334239-2334258 None:intergenic 35.0%
! GAAGCACCAAACATTCTATA+AGG - chr7_1:2334280-2334299 None:intergenic 35.0%
!! GTCTTGTTTAAACTTTGGTC+TGG + chr7_1:2334441-2334460 Msa1004720:intron 35.0%
AACTTTGGTCTGGTGTAATT+TGG + chr7_1:2334451-2334470 Msa1004720:intron 35.0%
!!! GGAGTTTTAAACGTGAAGTT+TGG - chr7_1:2334823-2334842 None:intergenic 35.0%
! CTTCACGTTTAAAACTCCTT+TGG + chr7_1:2334825-2334844 Msa1004720:intron 35.0%
ACTCATGCAGCTTATGATAT+TGG + chr7_1:2334987-2335006 Msa1004720:intron 35.0%
GCTATTGTTAAACCATTCCA+TGG - chr7_1:2335054-2335073 None:intergenic 35.0%
! GCATTAGGCATTTTTCTTCA+AGG + chr7_1:2335379-2335398 Msa1004720:CDS 35.0%
! ATTTAAGCAAAAGGTTCGGT+TGG - chr7_1:2335407-2335426 None:intergenic 35.0%
! TTGACGGTTTGTTCAAATTC+CGG - chr7_1:2335687-2335706 None:intergenic 35.0%
CGATCTACGATTGACAAAAT+TGG + chr7_1:2335713-2335732 Msa1004720:intron 35.0%
!! TATTGCATTTTGTCGTTTGC+AGG + chr7_1:2335758-2335777 Msa1004720:intron 35.0%
TTACAGCTCTCTGTGAAATT+TGG + chr7_1:2335981-2336000 Msa1004720:CDS 35.0%
CGTGAAGATATCGTTAATTC+TGG + chr7_1:2336010-2336029 Msa1004720:CDS 35.0%
GACTTGAGACACAAGTTAAA+GGG - chr7_1:2336278-2336297 None:intergenic 35.0%
TGACTTGAGACACAAGTTAA+AGG - chr7_1:2336279-2336298 None:intergenic 35.0%
!! TTAACTTGTGTCTCAAGTCA+TGG + chr7_1:2336279-2336298 Msa1004720:intron 35.0%
TAGGTTAAATGTGGAGTAAG+AGG + chr7_1:2336581-2336600 Msa1004720:intron 35.0%
TGGGTTTACAACATCTATAC+CGG + chr7_1:2336654-2336673 Msa1004720:CDS 35.0%
! AAGAGTATAGAGGATCATAC+AGG - chr7_1:2336701-2336720 None:intergenic 35.0%
! CAGAACAACTAAGAGTATAG+AGG - chr7_1:2336711-2336730 None:intergenic 35.0%
GAATGCAATTCTCGATATGA+AGG + chr7_1:2337024-2337043 Msa1004720:intron 35.0%
TGTTGGGAATTACCTTGAAA+TGG - chr7_1:2337254-2337273 None:intergenic 35.0%
! CAAGGTAATTCCCAACATTT+TGG + chr7_1:2337257-2337276 Msa1004720:intron 35.0%
! ATTACATTTGAAAGCGTGTC+TGG - chr7_1:2337341-2337360 None:intergenic 35.0%
TGTAATCACATGTATCGTGT+CGG + chr7_1:2337355-2337374 Msa1004720:intron 35.0%
GTCCTGCATTTAGCAATATA+AGG - chr7_1:2337459-2337478 None:intergenic 35.0%
! GCATGACTTCAATTTTCCAA+TGG + chr7_1:2338067-2338086 Msa1004720:CDS 35.0%
! TTCCTTCAAGGATTTTACTG+GGG + chr7_1:2338147-2338166 Msa1004720:CDS 35.0%
CAGCTAAAGTTAATTGGAGT+TGG + chr7_1:2338463-2338482 Msa1004720:intron 35.0%
TAATTGGAGTTGGATCATGA+AGG + chr7_1:2338473-2338492 Msa1004720:CDS 35.0%
GTTTCACCTATGTCTTAATG+AGG + chr7_1:2338558-2338577 Msa1004720:three_prime_UTR 35.0%
AAATTCCACCAACATTGCTT+TGG - chr7_1:2338588-2338607 None:intergenic 35.0%
!!! TTTGAGAGAAATTTTGGAGC+TGG + chr7_1:2338606-2338625 Msa1004720:three_prime_UTR 35.0%
ATCATATGCATCATCCATGT+AGG - chr7_1:2338690-2338709 None:intergenic 35.0%
GGAGAAGTTACATTTCTTCA+TGG + chr7_1:2338717-2338736 Msa1004720:three_prime_UTR 35.0%
! GATGCAAAGTACTCGATATA+TGG - chr7_1:2338808-2338827 None:intergenic 35.0%
CAATGCAATATGGTAGGGTT+AGG - chr7_1:2331447-2331466 None:intergenic 40.0%
!! TCCTTCATTGGATTTTGGGT+TGG + chr7_1:2332046-2332065 Msa1004720:intron 40.0%
!!! CCTTCATTGGATTTTGGGTT+GGG + chr7_1:2332047-2332066 Msa1004720:intron 40.0%
!!! TTTTGGGTTGGGTTGTGTTT+TGG + chr7_1:2332058-2332077 Msa1004720:intron 40.0%
!! TGATTGACTTGAGAGTGATG+AGG + chr7_1:2332402-2332421 Msa1004720:intron 40.0%
ACTTGAGAGTGATGAGGTAA+AGG + chr7_1:2332408-2332427 Msa1004720:intron 40.0%
CTTGAGAGTGATGAGGTAAA+GGG + chr7_1:2332409-2332428 Msa1004720:intron 40.0%
GGATGCTATACCCAATTTGT+TGG + chr7_1:2332460-2332479 Msa1004720:intron 40.0%
AGAGAATCCAAAGAGTTTGC+AGG + chr7_1:2332499-2332518 Msa1004720:intron 40.0%
! GGTATCAACTAAGTTTTCGG+CGG - chr7_1:2332814-2332833 None:intergenic 40.0%
GGAAGTGGTGAAACTTAGAT+TGG - chr7_1:2333574-2333593 None:intergenic 40.0%
ACCACTTCCCAAACAAGATT+AGG + chr7_1:2333585-2333604 Msa1004720:intron 40.0%
! ACCTAATCTTGTTTGGGAAG+TGG - chr7_1:2333589-2333608 None:intergenic 40.0%
!! TTGTGGGATTGTTAAGTTGG+GGG - chr7_1:2333628-2333647 None:intergenic 40.0%
GTGTCCTAATAACGTGTAGT+TGG + chr7_1:2333759-2333778 Msa1004720:intron 40.0%
TGATAAAGCAACATGGTGAG+TGG - chr7_1:2333816-2333835 None:intergenic 40.0%
! TTTGGTGTGCCTAATGAAAC+TGG + chr7_1:2334227-2334246 Msa1004720:intron 40.0%
!! AATGTTTGGTGCTTCTCACA+TGG + chr7_1:2334285-2334304 Msa1004720:intron 40.0%
!! ATGTTTGGTGCTTCTCACAT+GGG + chr7_1:2334286-2334305 Msa1004720:intron 40.0%
TGGTCTGGTGTAATTTGGTT+AGG + chr7_1:2334456-2334475 Msa1004720:intron 40.0%
ATTCGTGTCTTTGCATGTAC+CGG - chr7_1:2334584-2334603 None:intergenic 40.0%
!! CTTACGCATAAGTGTTGAGT+TGG + chr7_1:2334733-2334752 Msa1004720:intron 40.0%
!! CATAAGTGTTGAGTTGGTGT+CGG + chr7_1:2334739-2334758 Msa1004720:intron 40.0%
!! CTTAAGTATCGGTGTTGCAT+AGG + chr7_1:2334780-2334799 Msa1004720:intron 40.0%
CATGCAGCTTATGATATTGG+TGG + chr7_1:2334990-2335009 Msa1004720:intron 40.0%
! ATGATATTGGTGGATGATGC+TGG + chr7_1:2335000-2335019 Msa1004720:CDS 40.0%
CTCAATCATTCTCCATGGAA+TGG + chr7_1:2335039-2335058 Msa1004720:CDS 40.0%
TGCACTAGCATTCACATACA+AGG + chr7_1:2335113-2335132 Msa1004720:CDS 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_1:2335330-2335349 Msa1004720:CDS 40.0%
TCGTAGATCGCGTAAATTGA+CGG - chr7_1:2335703-2335722 None:intergenic 40.0%
AAGATTGATGGGAATACTGC+AGG + chr7_1:2335835-2335854 Msa1004720:CDS 40.0%
CATTGGATGTCAGAGAATTG+CGG + chr7_1:2335946-2335965 Msa1004720:intron 40.0%
TGGAACTTCATACTCCCAAT+CGG - chr7_1:2336406-2336425 None:intergenic 40.0%
! AATGATCGATCGTAGCTTGT+TGG + chr7_1:2336634-2336653 Msa1004720:CDS 40.0%
!! ATGATCGATCGTAGCTTGTT+GGG + chr7_1:2336635-2336654 Msa1004720:CDS 40.0%
AAGAGTCCTTCAGGATCAAA+AGG - chr7_1:2336969-2336988 None:intergenic 40.0%
TTGATCCTGAAGGACTCTTA+AGG + chr7_1:2336970-2336989 Msa1004720:CDS 40.0%
GTAGGTGTTAATGTCGTGTT+TGG - chr7_1:2337315-2337334 None:intergenic 40.0%
GATACTACAAGACAAGAGGT+TGG - chr7_1:2337512-2337531 None:intergenic 40.0%
ACCTCTTGTCTTGTAGTATC+TGG + chr7_1:2337512-2337531 Msa1004720:CDS 40.0%
GGCATTGCCTTGGATTTATT+TGG + chr7_1:2337533-2337552 Msa1004720:CDS 40.0%
AGTTATACTTGTCTCACTGC+TGG + chr7_1:2337667-2337686 Msa1004720:CDS 40.0%
! GCATTGGATTTGTTCGAGAT+AGG + chr7_1:2337745-2337764 Msa1004720:intron 40.0%
TTCCCCAGTAAAATCCTTGA+AGG - chr7_1:2338152-2338171 None:intergenic 40.0%
AATTGAACCGGCAAGATACA+TGG - chr7_1:2338326-2338345 None:intergenic 40.0%
TCACCTATGTCTTAATGAGG+AGG + chr7_1:2338561-2338580 Msa1004720:three_prime_UTR 40.0%
CAATGCAATATGGTAGGGTT+AGG - chr7_1:2331447-2331466 None:intergenic 40.0%
!! TCCTTCATTGGATTTTGGGT+TGG + chr7_1:2332046-2332065 Msa1004720:intron 40.0%
!!! CCTTCATTGGATTTTGGGTT+GGG + chr7_1:2332047-2332066 Msa1004720:intron 40.0%
!!! TTTTGGGTTGGGTTGTGTTT+TGG + chr7_1:2332058-2332077 Msa1004720:intron 40.0%
!! TGATTGACTTGAGAGTGATG+AGG + chr7_1:2332402-2332421 Msa1004720:intron 40.0%
ACTTGAGAGTGATGAGGTAA+AGG + chr7_1:2332408-2332427 Msa1004720:intron 40.0%
CTTGAGAGTGATGAGGTAAA+GGG + chr7_1:2332409-2332428 Msa1004720:intron 40.0%
GGATGCTATACCCAATTTGT+TGG + chr7_1:2332460-2332479 Msa1004720:intron 40.0%
AGAGAATCCAAAGAGTTTGC+AGG + chr7_1:2332499-2332518 Msa1004720:intron 40.0%
! GGTATCAACTAAGTTTTCGG+CGG - chr7_1:2332814-2332833 None:intergenic 40.0%
GGAAGTGGTGAAACTTAGAT+TGG - chr7_1:2333574-2333593 None:intergenic 40.0%
ACCACTTCCCAAACAAGATT+AGG + chr7_1:2333585-2333604 Msa1004720:intron 40.0%
! ACCTAATCTTGTTTGGGAAG+TGG - chr7_1:2333589-2333608 None:intergenic 40.0%
!! TTGTGGGATTGTTAAGTTGG+GGG - chr7_1:2333628-2333647 None:intergenic 40.0%
GTGTCCTAATAACGTGTAGT+TGG + chr7_1:2333759-2333778 Msa1004720:intron 40.0%
TGATAAAGCAACATGGTGAG+TGG - chr7_1:2333816-2333835 None:intergenic 40.0%
! TTTGGTGTGCCTAATGAAAC+TGG + chr7_1:2334227-2334246 Msa1004720:intron 40.0%
!! AATGTTTGGTGCTTCTCACA+TGG + chr7_1:2334285-2334304 Msa1004720:intron 40.0%
!! ATGTTTGGTGCTTCTCACAT+GGG + chr7_1:2334286-2334305 Msa1004720:intron 40.0%
TGGTCTGGTGTAATTTGGTT+AGG + chr7_1:2334456-2334475 Msa1004720:intron 40.0%
ATTCGTGTCTTTGCATGTAC+CGG - chr7_1:2334584-2334603 None:intergenic 40.0%
!! CTTACGCATAAGTGTTGAGT+TGG + chr7_1:2334733-2334752 Msa1004720:intron 40.0%
!! CATAAGTGTTGAGTTGGTGT+CGG + chr7_1:2334739-2334758 Msa1004720:intron 40.0%
!! CTTAAGTATCGGTGTTGCAT+AGG + chr7_1:2334780-2334799 Msa1004720:intron 40.0%
CATGCAGCTTATGATATTGG+TGG + chr7_1:2334990-2335009 Msa1004720:intron 40.0%
! ATGATATTGGTGGATGATGC+TGG + chr7_1:2335000-2335019 Msa1004720:CDS 40.0%
CTCAATCATTCTCCATGGAA+TGG + chr7_1:2335039-2335058 Msa1004720:CDS 40.0%
TGCACTAGCATTCACATACA+AGG + chr7_1:2335113-2335132 Msa1004720:CDS 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_1:2335330-2335349 Msa1004720:CDS 40.0%
TCGTAGATCGCGTAAATTGA+CGG - chr7_1:2335703-2335722 None:intergenic 40.0%
AAGATTGATGGGAATACTGC+AGG + chr7_1:2335835-2335854 Msa1004720:CDS 40.0%
CATTGGATGTCAGAGAATTG+CGG + chr7_1:2335946-2335965 Msa1004720:intron 40.0%
TGGAACTTCATACTCCCAAT+CGG - chr7_1:2336406-2336425 None:intergenic 40.0%
! AATGATCGATCGTAGCTTGT+TGG + chr7_1:2336634-2336653 Msa1004720:CDS 40.0%
!! ATGATCGATCGTAGCTTGTT+GGG + chr7_1:2336635-2336654 Msa1004720:CDS 40.0%
AAGAGTCCTTCAGGATCAAA+AGG - chr7_1:2336969-2336988 None:intergenic 40.0%
TTGATCCTGAAGGACTCTTA+AGG + chr7_1:2336970-2336989 Msa1004720:CDS 40.0%
GTAGGTGTTAATGTCGTGTT+TGG - chr7_1:2337315-2337334 None:intergenic 40.0%
GATACTACAAGACAAGAGGT+TGG - chr7_1:2337512-2337531 None:intergenic 40.0%
ACCTCTTGTCTTGTAGTATC+TGG + chr7_1:2337512-2337531 Msa1004720:CDS 40.0%
GGCATTGCCTTGGATTTATT+TGG + chr7_1:2337533-2337552 Msa1004720:CDS 40.0%
AGTTATACTTGTCTCACTGC+TGG + chr7_1:2337667-2337686 Msa1004720:CDS 40.0%
! GCATTGGATTTGTTCGAGAT+AGG + chr7_1:2337745-2337764 Msa1004720:intron 40.0%
TTCCCCAGTAAAATCCTTGA+AGG - chr7_1:2338152-2338171 None:intergenic 40.0%
AATTGAACCGGCAAGATACA+TGG - chr7_1:2338326-2338345 None:intergenic 40.0%
TCACCTATGTCTTAATGAGG+AGG + chr7_1:2338561-2338580 Msa1004720:three_prime_UTR 40.0%
AGCAACCGTTGAGAAGTTTG+AGG - chr7_1:2331826-2331845 None:intergenic 45.0%
! TTTTCGTGGTCTCACTGTTG+CGG + chr7_1:2331858-2331877 Msa1004720:CDS 45.0%
CCCAACCCAAAATCCAATGA+AGG - chr7_1:2332050-2332069 None:intergenic 45.0%
!!! GTTGGGTTGTGTTTTGGTGT+TGG + chr7_1:2332064-2332083 Msa1004720:intron 45.0%
! AAAGAGGCATGTAGCCGTAA+TGG - chr7_1:2332672-2332691 None:intergenic 45.0%
!! GCTTTGCAGATGACGGATAT+AGG - chr7_1:2332980-2332999 None:intergenic 45.0%
AGTCACATGTGTCCGTATGT+TGG - chr7_1:2334028-2334047 None:intergenic 45.0%
TGTGCCTAATGAAACTGGCA+TGG + chr7_1:2334232-2334251 Msa1004720:intron 45.0%
! ATATTGGTGGATGATGCTGG+TGG + chr7_1:2335003-2335022 Msa1004720:CDS 45.0%
CATGGAGAATGATTGAGTGC+TGG - chr7_1:2335036-2335055 None:intergenic 45.0%
CAGCACTCAATCATTCTCCA+TGG + chr7_1:2335034-2335053 Msa1004720:CDS 45.0%
GTCGCATCAACTTTGCAAGA+TGG - chr7_1:2335325-2335344 None:intergenic 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_1:2335333-2335352 Msa1004720:CDS 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_1:2335341-2335360 Msa1004720:CDS 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_1:2335342-2335361 Msa1004720:CDS 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_1:2335364-2335383 Msa1004720:CDS 45.0%
GCTATAGCAGTGCAACATAC+CGG + chr7_1:2335665-2335684 Msa1004720:intron 45.0%
!! TGCATTTTGTCGTTTGCAGG+AGG + chr7_1:2335761-2335780 Msa1004720:intron 45.0%
CGCGTTAGTGATTTGACGTT+CGG + chr7_1:2335794-2335813 Msa1004720:CDS 45.0%
TAGTGATTTGACGTTCGGAG+TGG + chr7_1:2335799-2335818 Msa1004720:CDS 45.0%
GGAACTTCATACTCCCAATC+GGG - chr7_1:2336405-2336424 None:intergenic 45.0%
!! GGTTCTGAAGATGGTTCTGT+TGG - chr7_1:2336426-2336445 None:intergenic 45.0%
GATCATTCCAACGACATTGC+AGG - chr7_1:2336621-2336640 None:intergenic 45.0%
ACCGGAGACCAATATATGCA+CGG + chr7_1:2336672-2336691 Msa1004720:CDS 45.0%
AAAGGAGCTTGACACCAAGA+AGG - chr7_1:2336951-2336970 None:intergenic 45.0%
! CAAGCTCCTTTTGATCCTGA+AGG + chr7_1:2336960-2336979 Msa1004720:CDS 45.0%
AGTCACCTTAAGAGTCCTTC+AGG - chr7_1:2336978-2336997 None:intergenic 45.0%
GATGGCAATTGTTACCTGCT+TGG + chr7_1:2337200-2337219 Msa1004720:CDS 45.0%
GCAATTGTTACCTGCTTGGT+TGG + chr7_1:2337204-2337223 Msa1004720:CDS 45.0%
ATAATGCAAGCCAACCAAGC+AGG - chr7_1:2337217-2337236 None:intergenic 45.0%
!! TGCTTGGTTGGCTTGCATTA+TGG + chr7_1:2337216-2337235 Msa1004720:CDS 45.0%
GCCAGATACTACAAGACAAG+AGG - chr7_1:2337516-2337535 None:intergenic 45.0%
TGTAGTATCTGGCATTGCCT+TGG + chr7_1:2337523-2337542 Msa1004720:CDS 45.0%
!! TGCTTGCAGGTTGATGTATG+TGG + chr7_1:2338036-2338055 Msa1004720:intron 45.0%
ATGCATGCATGCCTATCCAT+TGG - chr7_1:2338086-2338105 None:intergenic 45.0%
GGAAAATGTTGCAAGCTGCT+AGG - chr7_1:2338122-2338141 None:intergenic 45.0%
CCATGATCCATGTATCTTGC+CGG + chr7_1:2338316-2338335 Msa1004720:intron 45.0%
TTGGAGTTGGATCATGAAGG+AGG + chr7_1:2338476-2338495 Msa1004720:exon 45.0%
GGAGGAAGCAAATATGCTAG+TGG + chr7_1:2338494-2338513 Msa1004720:three_prime_UTR 45.0%
GGTCCTCCTCATTAAGACAT+AGG - chr7_1:2338567-2338586 None:intergenic 45.0%
AGCAACCGTTGAGAAGTTTG+AGG - chr7_1:2331826-2331845 None:intergenic 45.0%
! TTTTCGTGGTCTCACTGTTG+CGG + chr7_1:2331858-2331877 Msa1004720:CDS 45.0%
CCCAACCCAAAATCCAATGA+AGG - chr7_1:2332050-2332069 None:intergenic 45.0%
!!! GTTGGGTTGTGTTTTGGTGT+TGG + chr7_1:2332064-2332083 Msa1004720:intron 45.0%
! AAAGAGGCATGTAGCCGTAA+TGG - chr7_1:2332672-2332691 None:intergenic 45.0%
!! GCTTTGCAGATGACGGATAT+AGG - chr7_1:2332980-2332999 None:intergenic 45.0%
AGTCACATGTGTCCGTATGT+TGG - chr7_1:2334028-2334047 None:intergenic 45.0%
TGTGCCTAATGAAACTGGCA+TGG + chr7_1:2334232-2334251 Msa1004720:intron 45.0%
! ATATTGGTGGATGATGCTGG+TGG + chr7_1:2335003-2335022 Msa1004720:CDS 45.0%
CATGGAGAATGATTGAGTGC+TGG - chr7_1:2335036-2335055 None:intergenic 45.0%
CAGCACTCAATCATTCTCCA+TGG + chr7_1:2335034-2335053 Msa1004720:CDS 45.0%
GTCGCATCAACTTTGCAAGA+TGG - chr7_1:2335325-2335344 None:intergenic 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_1:2335333-2335352 Msa1004720:CDS 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_1:2335341-2335360 Msa1004720:CDS 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_1:2335342-2335361 Msa1004720:CDS 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_1:2335364-2335383 Msa1004720:CDS 45.0%
GCTATAGCAGTGCAACATAC+CGG + chr7_1:2335665-2335684 Msa1004720:intron 45.0%
!! TGCATTTTGTCGTTTGCAGG+AGG + chr7_1:2335761-2335780 Msa1004720:intron 45.0%
CGCGTTAGTGATTTGACGTT+CGG + chr7_1:2335794-2335813 Msa1004720:CDS 45.0%
TAGTGATTTGACGTTCGGAG+TGG + chr7_1:2335799-2335818 Msa1004720:CDS 45.0%
GGAACTTCATACTCCCAATC+GGG - chr7_1:2336405-2336424 None:intergenic 45.0%
!! GGTTCTGAAGATGGTTCTGT+TGG - chr7_1:2336426-2336445 None:intergenic 45.0%
GATCATTCCAACGACATTGC+AGG - chr7_1:2336621-2336640 None:intergenic 45.0%
ACCGGAGACCAATATATGCA+CGG + chr7_1:2336672-2336691 Msa1004720:CDS 45.0%
AAAGGAGCTTGACACCAAGA+AGG - chr7_1:2336951-2336970 None:intergenic 45.0%
! CAAGCTCCTTTTGATCCTGA+AGG + chr7_1:2336960-2336979 Msa1004720:CDS 45.0%
AGTCACCTTAAGAGTCCTTC+AGG - chr7_1:2336978-2336997 None:intergenic 45.0%
GATGGCAATTGTTACCTGCT+TGG + chr7_1:2337200-2337219 Msa1004720:CDS 45.0%
GCAATTGTTACCTGCTTGGT+TGG + chr7_1:2337204-2337223 Msa1004720:CDS 45.0%
ATAATGCAAGCCAACCAAGC+AGG - chr7_1:2337217-2337236 None:intergenic 45.0%
!! TGCTTGGTTGGCTTGCATTA+TGG + chr7_1:2337216-2337235 Msa1004720:CDS 45.0%
GCCAGATACTACAAGACAAG+AGG - chr7_1:2337516-2337535 None:intergenic 45.0%
TGTAGTATCTGGCATTGCCT+TGG + chr7_1:2337523-2337542 Msa1004720:CDS 45.0%
!! TGCTTGCAGGTTGATGTATG+TGG + chr7_1:2338036-2338055 Msa1004720:intron 45.0%
ATGCATGCATGCCTATCCAT+TGG - chr7_1:2338086-2338105 None:intergenic 45.0%
GGAAAATGTTGCAAGCTGCT+AGG - chr7_1:2338122-2338141 None:intergenic 45.0%
CCATGATCCATGTATCTTGC+CGG + chr7_1:2338316-2338335 Msa1004720:intron 45.0%
TTGGAGTTGGATCATGAAGG+AGG + chr7_1:2338476-2338495 Msa1004720:exon 45.0%
GGAGGAAGCAAATATGCTAG+TGG + chr7_1:2338494-2338513 Msa1004720:three_prime_UTR 45.0%
GGTCCTCCTCATTAAGACAT+AGG - chr7_1:2338567-2338586 None:intergenic 45.0%
!! AATATATTTATGTTTATTAT+TGG + chr7_1:2331513-2331532 Msa1004720:intron 5.0%
!! TTATAAAAAAATTTAGTTAA+TGG + chr7_1:2332316-2332335 Msa1004720:intron 5.0%
!! TATAAAAAAATTTAGTTAAT+GGG + chr7_1:2332317-2332336 Msa1004720:intron 5.0%
!!! ATTTTTTAATATTTTCATTT+AGG + chr7_1:2332839-2332858 Msa1004720:intron 5.0%
!!! TTTTTTAATATTTTCATTTA+GGG + chr7_1:2332840-2332859 Msa1004720:intron 5.0%
!!! TTTTTGATAATATTTTTTTT+AGG + chr7_1:2333062-2333081 Msa1004720:intron 5.0%
!!! TTGAAATATATTTTTATTTT+TGG + chr7_1:2333974-2333993 Msa1004720:intron 5.0%
!! AATATATTTATGTTTATTAT+TGG + chr7_1:2331513-2331532 Msa1004720:intron 5.0%
!! TTATAAAAAAATTTAGTTAA+TGG + chr7_1:2332316-2332335 Msa1004720:intron 5.0%
!! TATAAAAAAATTTAGTTAAT+GGG + chr7_1:2332317-2332336 Msa1004720:intron 5.0%
!!! ATTTTTTAATATTTTCATTT+AGG + chr7_1:2332839-2332858 Msa1004720:intron 5.0%
!!! TTTTTTAATATTTTCATTTA+GGG + chr7_1:2332840-2332859 Msa1004720:intron 5.0%
!!! TTTTTGATAATATTTTTTTT+AGG + chr7_1:2333062-2333081 Msa1004720:intron 5.0%
!!! TTGAAATATATTTTTATTTT+TGG + chr7_1:2333974-2333993 Msa1004720:intron 5.0%
!!! GGGTTGTGTTTTGGTGTTGG+TGG + chr7_1:2332067-2332086 Msa1004720:intron 50.0%
GTCGAGTTTCGACGAGTCAT+CGG - chr7_1:2332277-2332296 None:intergenic 50.0%
CGTGCAACCTGCAAACTCTT+TGG - chr7_1:2332509-2332528 None:intergenic 50.0%
!! ACGCGTTGAAGAGGAGTATC+GGG - chr7_1:2333514-2333533 None:intergenic 50.0%
! CACGCGTTGAAGAGGAGTAT+CGG - chr7_1:2333515-2333534 None:intergenic 50.0%
AAGCAACATGGTGAGTGGTG+AGG - chr7_1:2333811-2333830 None:intergenic 50.0%
! GTCTTTGCATGTACCGGTGT+CGG - chr7_1:2334578-2334597 None:intergenic 50.0%
!! AAACTCCTTTGGTGCCTCCT+AGG + chr7_1:2334836-2334855 Msa1004720:intron 50.0%
!! ATTTGCCTAGGAGGCACCAA+AGG - chr7_1:2334844-2334863 None:intergenic 50.0%
CGGCGCTATAACGTGCATAT+CGG + chr7_1:2335568-2335587 Msa1004720:intron 50.0%
ATGGGATGTACGTTCCCGAT+TGG + chr7_1:2336388-2336407 Msa1004720:CDS 50.0%
TGGGATGTACGTTCCCGATT+GGG + chr7_1:2336389-2336408 Msa1004720:CDS 50.0%
ATTCCAACGACATTGCAGGC+TGG - chr7_1:2336617-2336636 None:intergenic 50.0%
! CCCGTGCATATATTGGTCTC+CGG - chr7_1:2336676-2336695 None:intergenic 50.0%
CCGGAGACCAATATATGCAC+GGG + chr7_1:2336673-2336692 Msa1004720:CDS 50.0%
!! TGACACCAAGAAGGAGCATC+AGG - chr7_1:2336942-2336961 None:intergenic 50.0%
! TGAAAGCGTGTCTGGTGTGT+AGG - chr7_1:2337333-2337352 None:intergenic 50.0%
CCGGCAAGATACATGGATCA+TGG - chr7_1:2338319-2338338 None:intergenic 50.0%
GAGGAGGACCAAAGCAATGT+TGG + chr7_1:2338577-2338596 Msa1004720:three_prime_UTR 50.0%
GAGGACCAAAGCAATGTTGG+TGG + chr7_1:2338580-2338599 Msa1004720:three_prime_UTR 50.0%
!!! GGGTTGTGTTTTGGTGTTGG+TGG + chr7_1:2332067-2332086 Msa1004720:intron 50.0%
GTCGAGTTTCGACGAGTCAT+CGG - chr7_1:2332277-2332296 None:intergenic 50.0%
CGTGCAACCTGCAAACTCTT+TGG - chr7_1:2332509-2332528 None:intergenic 50.0%
!! ACGCGTTGAAGAGGAGTATC+GGG - chr7_1:2333514-2333533 None:intergenic 50.0%
! CACGCGTTGAAGAGGAGTAT+CGG - chr7_1:2333515-2333534 None:intergenic 50.0%
AAGCAACATGGTGAGTGGTG+AGG - chr7_1:2333811-2333830 None:intergenic 50.0%
! GTCTTTGCATGTACCGGTGT+CGG - chr7_1:2334578-2334597 None:intergenic 50.0%
!! AAACTCCTTTGGTGCCTCCT+AGG + chr7_1:2334836-2334855 Msa1004720:intron 50.0%
!! ATTTGCCTAGGAGGCACCAA+AGG - chr7_1:2334844-2334863 None:intergenic 50.0%
CGGCGCTATAACGTGCATAT+CGG + chr7_1:2335568-2335587 Msa1004720:intron 50.0%
ATGGGATGTACGTTCCCGAT+TGG + chr7_1:2336388-2336407 Msa1004720:CDS 50.0%
TGGGATGTACGTTCCCGATT+GGG + chr7_1:2336389-2336408 Msa1004720:CDS 50.0%
ATTCCAACGACATTGCAGGC+TGG - chr7_1:2336617-2336636 None:intergenic 50.0%
! CCCGTGCATATATTGGTCTC+CGG - chr7_1:2336676-2336695 None:intergenic 50.0%
CCGGAGACCAATATATGCAC+GGG + chr7_1:2336673-2336692 Msa1004720:CDS 50.0%
!! TGACACCAAGAAGGAGCATC+AGG - chr7_1:2336942-2336961 None:intergenic 50.0%
! TGAAAGCGTGTCTGGTGTGT+AGG - chr7_1:2337333-2337352 None:intergenic 50.0%
CCGGCAAGATACATGGATCA+TGG - chr7_1:2338319-2338338 None:intergenic 50.0%
GAGGAGGACCAAAGCAATGT+TGG + chr7_1:2338577-2338596 Msa1004720:three_prime_UTR 50.0%
GAGGACCAAAGCAATGTTGG+TGG + chr7_1:2338580-2338599 Msa1004720:three_prime_UTR 50.0%
GGACACGGCTTTGCAGATGA+CGG - chr7_1:2332987-2333006 None:intergenic 55.0%
!! GCGTTGAAGAGGAGTATCGG+GGG - chr7_1:2333512-2333531 None:intergenic 55.0%
!! CGCGTTGAAGAGGAGTATCG+GGG - chr7_1:2333513-2333532 None:intergenic 55.0%
CTCACACACACGCGTTGAAG+AGG - chr7_1:2333523-2333542 None:intergenic 55.0%
CATGGTGAGTGGTGAGGAGT+CGG - chr7_1:2333805-2333824 None:intergenic 55.0%
!! ACACTATGAGGCACCGACAC+CGG + chr7_1:2334562-2334581 Msa1004720:intron 55.0%
!! GTTGAGTTGGTGTCGGACAC+TGG + chr7_1:2334746-2334765 Msa1004720:intron 55.0%
TGTGGAGTAAGAGGCGACAC+TGG + chr7_1:2336590-2336609 Msa1004720:CDS 55.0%
ACAGGCGCCCGTGCATATAT+TGG - chr7_1:2336683-2336702 None:intergenic 55.0%
GGAGGCAATGGTCCATAGTC+AGG - chr7_1:2336921-2336940 None:intergenic 55.0%
!! GAAGGAGCATCAGGAGGCAA+TGG - chr7_1:2336933-2336952 None:intergenic 55.0%
TGCCTCCTGATGCTCCTTCT+TGG + chr7_1:2336934-2336953 Msa1004720:CDS 55.0%
!! CACCAAGAAGGAGCATCAGG+AGG - chr7_1:2336939-2336958 None:intergenic 55.0%
GCTGCTGGCATTCTCTTTGC+TGG + chr7_1:2337691-2337710 Msa1004720:CDS 55.0%
GGACACGGCTTTGCAGATGA+CGG - chr7_1:2332987-2333006 None:intergenic 55.0%
!! GCGTTGAAGAGGAGTATCGG+GGG - chr7_1:2333512-2333531 None:intergenic 55.0%
!! CGCGTTGAAGAGGAGTATCG+GGG - chr7_1:2333513-2333532 None:intergenic 55.0%
CTCACACACACGCGTTGAAG+AGG - chr7_1:2333523-2333542 None:intergenic 55.0%
CATGGTGAGTGGTGAGGAGT+CGG - chr7_1:2333805-2333824 None:intergenic 55.0%
!! ACACTATGAGGCACCGACAC+CGG + chr7_1:2334562-2334581 Msa1004720:intron 55.0%
!! GTTGAGTTGGTGTCGGACAC+TGG + chr7_1:2334746-2334765 Msa1004720:intron 55.0%
TGTGGAGTAAGAGGCGACAC+TGG + chr7_1:2336590-2336609 Msa1004720:CDS 55.0%
ACAGGCGCCCGTGCATATAT+TGG - chr7_1:2336683-2336702 None:intergenic 55.0%
GGAGGCAATGGTCCATAGTC+AGG - chr7_1:2336921-2336940 None:intergenic 55.0%
!! GAAGGAGCATCAGGAGGCAA+TGG - chr7_1:2336933-2336952 None:intergenic 55.0%
TGCCTCCTGATGCTCCTTCT+TGG + chr7_1:2336934-2336953 Msa1004720:CDS 55.0%
!! CACCAAGAAGGAGCATCAGG+AGG - chr7_1:2336939-2336958 None:intergenic 55.0%
GCTGCTGGCATTCTCTTTGC+TGG + chr7_1:2337691-2337710 Msa1004720:CDS 55.0%
! GAGTGGTGAGGAGTCGGTTC+AGG - chr7_1:2333799-2333818 None:intergenic 60.0%
GGACCAGCCTGCAATGTCGT+TGG + chr7_1:2336611-2336630 Msa1004720:CDS 60.0%
!! TGTCTCACTGCTGGTGCTGC+TGG + chr7_1:2337676-2337695 Msa1004720:CDS 60.0%
! GAGTGGTGAGGAGTCGGTTC+AGG - chr7_1:2333799-2333818 None:intergenic 60.0%
GGACCAGCCTGCAATGTCGT+TGG + chr7_1:2336611-2336630 Msa1004720:CDS 60.0%
!! TGTCTCACTGCTGGTGCTGC+TGG + chr7_1:2337676-2337695 Msa1004720:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 2331272 2338933 2331272 ID=Msa1004720;Name=Msa1004720
chr7_1 mRNA 2331272 2338933 2331272 ID=Msa1004720-mRNA-1;Parent=Msa1004720;Name=Msa1004720-mRNA-1;_AED=0.10;_eAED=0.10;_QI=243|1|1|1|0.92|0.85|14|441|460
chr7_1 exon 2331272 2331475 2331272 ID=Msa1004720-mRNA-1:exon:893;Parent=Msa1004720-mRNA-1
chr7_1 exon 2331595 2331879 2331595 ID=Msa1004720-mRNA-1:exon:894;Parent=Msa1004720-mRNA-1
chr7_1 exon 2334997 2335134 2334997 ID=Msa1004720-mRNA-1:exon:895;Parent=Msa1004720-mRNA-1
chr7_1 exon 2335319 2335400 2335319 ID=Msa1004720-mRNA-1:exon:896;Parent=Msa1004720-mRNA-1
chr7_1 exon 2335780 2335856 2335780 ID=Msa1004720-mRNA-1:exon:897;Parent=Msa1004720-mRNA-1
chr7_1 exon 2335959 2336065 2335959 ID=Msa1004720-mRNA-1:exon:898;Parent=Msa1004720-mRNA-1
chr7_1 exon 2336344 2336458 2336344 ID=Msa1004720-mRNA-1:exon:899;Parent=Msa1004720-mRNA-1
chr7_1 exon 2336584 2336700 2336584 ID=Msa1004720-mRNA-1:exon:900;Parent=Msa1004720-mRNA-1
chr7_1 exon 2336900 2336991 2336900 ID=Msa1004720-mRNA-1:exon:901;Parent=Msa1004720-mRNA-1
chr7_1 exon 2337194 2337260 2337194 ID=Msa1004720-mRNA-1:exon:902;Parent=Msa1004720-mRNA-1
chr7_1 exon 2337476 2337554 2337476 ID=Msa1004720-mRNA-1:exon:903;Parent=Msa1004720-mRNA-1
chr7_1 exon 2337635 2337726 2337635 ID=Msa1004720-mRNA-1:exon:904;Parent=Msa1004720-mRNA-1
chr7_1 exon 2338045 2338188 2338045 ID=Msa1004720-mRNA-1:exon:905;Parent=Msa1004720-mRNA-1
chr7_1 exon 2338466 2338933 2338466 ID=Msa1004720-mRNA-1:exon:906;Parent=Msa1004720-mRNA-1
chr7_1 five_prime_UTR 2331272 2331475 2331272 ID=Msa1004720-mRNA-1:five_prime_utr;Parent=Msa1004720-mRNA-1
chr7_1 five_prime_UTR 2331595 2331633 2331595 ID=Msa1004720-mRNA-1:five_prime_utr;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2331634 2331879 2331634 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2334997 2335134 2334997 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2335319 2335400 2335319 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2335780 2335856 2335780 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2335959 2336065 2335959 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2336344 2336458 2336344 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2336584 2336700 2336584 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2336900 2336991 2336900 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2337194 2337260 2337194 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2337476 2337554 2337476 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2337635 2337726 2337635 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2338045 2338188 2338045 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 CDS 2338466 2338492 2338466 ID=Msa1004720-mRNA-1:cds;Parent=Msa1004720-mRNA-1
chr7_1 three_prime_UTR 2338493 2338933 2338493 ID=Msa1004720-mRNA-1:three_prime_utr;Parent=Msa1004720-mRNA-1
Gene Sequence

>Msa1004720

ATGAAGAAATACGAAGCAATAAAGAGTTTTGAAGAGAATGATGAAGATTTGGAAATGGGTCATGAACAAGAACAACAGATCCATGATTCAGCTACAAAGATTATTAATAATGAAGAACTTTCTGCAATGATTTCTTCTTCTTCATCTTCATCAAGAAAACAAGAACAAGAACAACATCAACAACAACAACCTCAAACTTCTCAACGGTTGCTTTCACTTGATGTTTTTCGTGGTCTCACTGTTGCGCTTATGATATTGGTGGATGATGCTGGTGGACTTATTCCAGCACTCAATCATTCTCCATGGAATGGTTTAACAATAGCAGACTTTGTTATGCCATTTTTTCTTTTTATTGTTGGCGTTGCACTAGCATTCACATACAAGAAACCATCTTGCAAAGTTGATGCGACTAGAAAGGCGGTTTTACGGGCGCTTAAGCTTCTTGCATTAGGCATTTTTCTTCAAGGAGGCTATGTTCATCGCGTTAGTGATTTGACGTTCGGAGTGGATTTGAAGCAGATAAGATTGATGGGAATACTGCAGAGAATTGCGGTAGCATATTTGATTACAGCTCTCTGTGAAATTTGGCTCAAGCGTGAAGATATCGTTAATTCTGGATCATCCCTTTTGAGAAAGTATCGATATCAATGGGCTTTGGCTTTATTTCTATCTGTCATTTATCTTTGCTTGCTGTATGGGATGTACGTTCCCGATTGGGAGTATGAAGTTCCAACAGAACCATCTTCAGAACCTATGAAATTTTCTGTTAAATGTGGAGTAAGAGGCGACACTGGACCAGCCTGCAATGTCGTTGGAATGATCGATCGTAGCTTGTTGGGTTTACAACATCTATACCGGAGACCAATATATGCACGGGCGCCTGAATGCAGTATAAATTCTCCTGACTATGGACCATTGCCTCCTGATGCTCCTTCTTGGTGTCAAGCTCCTTTTGATCCTGAAGGACTCTTAAGTTCAGTGATGGCAATTGTTACCTGCTTGGTTGGCTTGCATTATGGTCATATTATTCTCCATTTCAAGGACCACAGAATTAGAATCTTACATTGGATGATTCCAACCTCTTGTCTTGTAGTATCTGGCATTGCCTTGGATTTATTTGGAATGCATGTAAATAAAGTTCTCTACTCATTTAGTTATACTTGTCTCACTGCTGGTGCTGCTGGCATTCTCTTTGCTGGAATATATTTGATGGTTGATGTATGTGGATATAGTCGCATGACTTCAATTTTCCAATGGATAGGCATGCATGCATTAATGATTTATGTCCTAGCAGCTTGCAACATTTTCCCAATTTTCCTTCAAGGATTTTACTGGGGAAATCCTCATAACAACATTCTAAAGTTAATTGGAGTTGGATCATGA

Protein sequence

>Msa1004720

MKKYEAIKSFEENDEDLEMGHEQEQQIHDSATKIINNEELSAMISSSSSSSRKQEQEQHQQQQPQTSQRLLSLDVFRGLTVALMILVDDAGGLIPALNHSPWNGLTIADFVMPFFLFIVGVALAFTYKKPSCKVDATRKAVLRALKLLALGIFLQGGYVHRVSDLTFGVDLKQIRLMGILQRIAVAYLITALCEIWLKREDIVNSGSSLLRKYRYQWALALFLSVIYLCLLYGMYVPDWEYEVPTEPSSEPMKFSVKCGVRGDTGPACNVVGMIDRSLLGLQHLYRRPIYARAPECSINSPDYGPLPPDAPSWCQAPFDPEGLLSSVMAIVTCLVGLHYGHIILHFKDHRIRILHWMIPTSCLVVSGIALDLFGMHVNKVLYSFSYTCLTAGAAGILFAGIYLMVDVCGYSRMTSIFQWIGMHALMIYVLAACNIFPIFLQGFYWGNPHNNILKLIGVGS*