Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359610 | XP_024631051.2 | 97.773 | 494 | 10 | 1 | 1 | 493 | 1 | 494 | 0.0 | 983 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359610 | sp|Q9LEV7|FBT6_ARATH | 59.213 | 483 | 197 | 0 | 5 | 487 | 21 | 503 | 0.0 | 595 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359610 | A0A1S2Y5D5 | 87.342 | 474 | 59 | 1 | 21 | 493 | 49 | 522 | 0.0 | 861 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1359610 | Msa1403690 | 0.839482 | 1.543186e-57 | -8.615850e-47 |
| Msa0713060 | Msa1359610 | 0.820479 | 6.710401e-53 | -8.615850e-47 |
| Msa0769720 | Msa1359610 | 0.807777 | 4.282918e-50 | -8.615850e-47 |
| Msa1252810 | Msa1359610 | 0.821322 | 4.293919e-53 | -8.615850e-47 |
| Msa0402800 | Msa1359610 | 0.800707 | 1.270030e-48 | -8.615850e-47 |
| Msa0316470 | Msa1359610 | 0.808203 | 3.476133e-50 | -8.615850e-47 |
| Msa1218160 | Msa1359610 | 0.802968 | 4.361177e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359610 | MtrunA17_Chr1g0150041 | 80.831 | 313 | 24 | 3 | 1 | 312 | 1 | 278 | 1.01e-172 | 487 |
| Msa1359610 | MtrunA17_Chr1g0150001 | 47.581 | 496 | 247 | 4 | 2 | 487 | 5 | 497 | 1.24e-157 | 457 |
| Msa1359610 | MtrunA17_Chr1g0150031 | 98.485 | 198 | 3 | 0 | 296 | 493 | 2 | 199 | 4.78e-138 | 395 |
| Msa1359610 | MtrunA17_Chr1g0205221 | 27.873 | 409 | 281 | 7 | 37 | 439 | 109 | 509 | 1.74e-48 | 175 |
| Msa1359610 | MtrunA17_Chr3g0098661 | 25.610 | 492 | 299 | 9 | 27 | 456 | 2 | 488 | 3.17e-43 | 159 |
| Msa1359610 | MtrunA17_Chr2g0293351 | 25.000 | 408 | 276 | 7 | 51 | 440 | 27 | 422 | 6.19e-29 | 119 |
| Msa1359610 | MtrunA17_Chr3g0079271 | 25.679 | 405 | 280 | 9 | 62 | 455 | 120 | 514 | 3.69e-23 | 102 |
| Msa1359610 | MtrunA17_Chr2g0293371 | 24.000 | 300 | 209 | 4 | 151 | 440 | 42 | 332 | 1.05e-16 | 81.6 |
| Msa1359610 | MtrunA17_Chr2g0293361 | 24.681 | 235 | 165 | 3 | 210 | 440 | 1 | 227 | 6.05e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1359610 | AT5G10820.1 | 59.213 | 483 | 197 | 0 | 5 | 487 | 21 | 503 | 0.0 | 595 |
| Msa1359610 | AT1G79710.2 | 47.423 | 485 | 251 | 2 | 4 | 487 | 11 | 492 | 9.74e-168 | 483 |
| Msa1359610 | AT1G79710.1 | 47.423 | 485 | 251 | 2 | 4 | 487 | 11 | 492 | 9.74e-168 | 483 |
| Msa1359610 | AT5G25050.1 | 45.175 | 487 | 260 | 2 | 5 | 487 | 9 | 492 | 5.07e-154 | 448 |
| Msa1359610 | AT5G25040.4 | 44.148 | 487 | 258 | 4 | 5 | 487 | 9 | 485 | 8.04e-140 | 412 |
| Msa1359610 | AT5G25040.2 | 41.992 | 512 | 258 | 5 | 5 | 487 | 9 | 510 | 2.71e-134 | 398 |
| Msa1359610 | AT1G79710.3 | 46.547 | 391 | 205 | 2 | 4 | 393 | 11 | 398 | 1.44e-130 | 385 |
| Msa1359610 | AT5G25040.1 | 44.496 | 427 | 227 | 3 | 5 | 430 | 9 | 426 | 7.67e-124 | 369 |
| Msa1359610 | AT5G25040.3 | 42.819 | 376 | 208 | 2 | 5 | 379 | 9 | 378 | 2.13e-104 | 317 |
| Msa1359610 | AT5G25040.5 | 46.802 | 344 | 170 | 3 | 147 | 487 | 5 | 338 | 1.93e-102 | 311 |
| Msa1359610 | AT2G32040.2 | 29.545 | 396 | 263 | 7 | 53 | 439 | 6 | 394 | 8.45e-49 | 174 |
| Msa1359610 | AT2G32040.1 | 29.369 | 412 | 273 | 9 | 37 | 439 | 123 | 525 | 1.21e-48 | 176 |
| Msa1359610 | AT5G54860.1 | 25.257 | 487 | 302 | 8 | 27 | 456 | 2 | 483 | 2.68e-44 | 163 |
| Msa1359610 | AT2G33280.1 | 24.818 | 411 | 284 | 9 | 62 | 459 | 103 | 501 | 6.44e-23 | 102 |
| Msa1359610 | AT2G33280.3 | 25.250 | 400 | 274 | 9 | 73 | 459 | 6 | 393 | 2.02e-22 | 100 |
| Msa1359610 | AT1G04570.1 | 26.107 | 429 | 296 | 11 | 44 | 462 | 86 | 503 | 2.81e-22 | 100 |
| Msa1359610 | AT1G04570.2 | 25.652 | 230 | 162 | 4 | 236 | 462 | 132 | 355 | 3.83e-17 | 83.6 |
| Msa1359610 | AT1G64890.1 | 22.426 | 437 | 301 | 10 | 1 | 431 | 1 | 405 | 4.00e-15 | 77.8 |
| Msa1359610 | AT2G33280.2 | 25.446 | 224 | 155 | 5 | 239 | 459 | 105 | 319 | 2.08e-14 | 75.1 |
Find 109 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTGCATTGACAATTGTTC+TGG | 0.171571 | tig0016715:-332223 | Msa1359610:CDS |
| CTACGTTGGAATTTGAAAAT+TGG | 0.214262 | tig0016715:-330807 | Msa1359610:CDS |
| CATGGATTCTTAAACCTATC+TGG | 0.221992 | tig0016715:-333230 | Msa1359610:CDS |
| TCTGGTTCTGGTGCTCTTCT+TGG | 0.244927 | tig0016715:-332949 | Msa1359610:CDS |
| TTAGGGGTCGCTTGGTCTTA+TGG | 0.248348 | tig0016715:-332253 | Msa1359610:intron |
| GGTGCAGTGGCTTCAATAAT+AGG | 0.259173 | tig0016715:-330936 | Msa1359610:CDS |
| TAGATTTGTTACACTTGTTT+TGG | 0.260439 | tig0016715:-330523 | Msa1359610:CDS |
| GGTTTCTTTGTTCATCATCT+TGG | 0.287418 | tig0016715:-332913 | Msa1359610:CDS |
| AACTAGTCACTGATTACTAT+TGG | 0.295416 | tig0016715:-333314 | Msa1359610:CDS |
| ACTCCAGCAACGACAAAATA+AGG | 0.315707 | tig0016715:+333162 | None:intergenic |
| ATTTCTCTAAACTTCAGTTT+TGG | 0.318615 | tig0016715:+330386 | None:intergenic |
| TTGGTGGCCTTATATCAAAA+TGG | 0.333437 | tig0016715:-330632 | Msa1359610:CDS |
| CTGCTATGAATGTTGGGTTT+AGG | 0.335500 | tig0016715:+333388 | None:intergenic |
| TAAGAATCACAGGCAAAATA+AGG | 0.338692 | tig0016715:-330743 | Msa1359610:CDS |
| GTGCAGTGGCTTCAATAATA+GGG | 0.341061 | tig0016715:-330935 | Msa1359610:CDS |
| CCTGCATTGACAATTGTTCT+GGG | 0.345500 | tig0016715:-332222 | Msa1359610:CDS |
| ATATGCAATATCAGGTCTAT+TGG | 0.355056 | tig0016715:-330844 | Msa1359610:CDS |
| CCACACAAACTCTGCAAATC+AGG | 0.355919 | tig0016715:+332979 | None:intergenic |
| GCAGGAATATTCCTAGTATA+TGG | 0.356591 | tig0016715:-333369 | Msa1359610:CDS |
| TGTTCATCATCTTGGTCCTC+AGG | 0.362448 | tig0016715:-332905 | Msa1359610:intron |
| AATGTTCCTTCAATTCCTAA+TGG | 0.382788 | tig0016715:+330684 | None:intergenic |
| CTCCGACGATATCCCATTAC+TGG | 0.386877 | tig0016715:+333186 | None:intergenic |
| CAACTCCTATATGCAATATC+AGG | 0.388681 | tig0016715:-330852 | Msa1359610:CDS |
| AGCATTGATAGCCATTCTAT+TGG | 0.394895 | tig0016715:+333420 | None:intergenic |
| TGGTGGCCTTATATCAAAAT+GGG | 0.409984 | tig0016715:-330631 | Msa1359610:CDS |
| TTTGTCGTTGCTGGAGTTGT+TGG | 0.416881 | tig0016715:-333156 | Msa1359610:CDS |
| GCCATTCTATTGGTTCTGTT+AGG | 0.421134 | tig0016715:+333430 | None:intergenic |
| AGGAATAGTATTGAGGTTCC+AGG | 0.421524 | tig0016715:-333009 | Msa1359610:CDS |
| ATATTCCTGCTATGAATGTT+GGG | 0.421667 | tig0016715:+333382 | None:intergenic |
| AATATTCCTGCTATGAATGT+TGG | 0.422576 | tig0016715:+333381 | None:intergenic |
| ACGTAGAGTTGAACTGTTGA+AGG | 0.432809 | tig0016715:+333270 | None:intergenic |
| TCCTAATGTTGGGCCTTATG+AGG | 0.433740 | tig0016715:-330490 | Msa1359610:CDS |
| TCCTCATAAGGCCCAACATT+AGG | 0.441850 | tig0016715:+330489 | None:intergenic |
| TTGAATATGCAGGAGTTTGT+TGG | 0.457566 | tig0016715:-330975 | Msa1359610:intron |
| TTTGTGCTTAGTACCATCAT+AGG | 0.457654 | tig0016715:+330714 | None:intergenic |
| CTTGGCCTATACCATATACT+AGG | 0.458394 | tig0016715:+333358 | None:intergenic |
| AGCACAAAACTATGTCCATT+AGG | 0.463739 | tig0016715:-330699 | Msa1359610:CDS |
| CTATGTCCATTAGGAATTGA+AGG | 0.463884 | tig0016715:-330690 | Msa1359610:CDS |
| ATGGATTCTTAAACCTATCT+GGG | 0.464122 | tig0016715:-333229 | Msa1359610:CDS |
| GTTGGTATAATCTATGCAAT+TGG | 0.464940 | tig0016715:-330957 | Msa1359610:CDS |
| ATATTCCTAGTATATGGTAT+AGG | 0.475760 | tig0016715:-333363 | Msa1359610:CDS |
| GAAGGAATCAACTCCTCATA+AGG | 0.481908 | tig0016715:+330477 | None:intergenic |
| AGGTGAGGTGAGTGTGGTTG+CGG | 0.485151 | tig0016715:-333103 | Msa1359610:CDS |
| CTTCTTGGTTATCTTGCTAG+TGG | 0.487565 | tig0016715:-332934 | Msa1359610:CDS |
| CCTGATTTGCAGAGTTTGTG+TGG | 0.489748 | tig0016715:-332979 | Msa1359610:CDS |
| TGAGGAGTTGATTCCTTCTG+AGG | 0.491264 | tig0016715:-330472 | Msa1359610:CDS |
| CTGATTTGCAGAGTTTGTGT+GGG | 0.494014 | tig0016715:-332978 | Msa1359610:CDS |
| AGTCGGCCCTGCATTCTCTC+AGG | 0.500818 | tig0016715:-331833 | Msa1359610:intron |
| ATCTATGAAAAGAGAACCAC+TGG | 0.501257 | tig0016715:-332192 | Msa1359610:CDS |
| GGTATAGGCCAAGGCTTCAC+AGG | 0.501541 | tig0016715:-333348 | Msa1359610:CDS |
| AATCAGTTCTAGTAACATGA+AGG | 0.503411 | tig0016715:+330586 | None:intergenic |
| CCCAGAACAATTGTCAATGC+AGG | 0.503491 | tig0016715:+332222 | None:intergenic |
| CTATTGATGCTTGTATTGCA+AGG | 0.511611 | tig0016715:-333029 | Msa1359610:CDS |
| CTTATATCAAAATGGGGTGG+AGG | 0.513361 | tig0016715:-330624 | Msa1359610:CDS |
| GTCTGCTACGATTGTTGCTG+TGG | 0.514938 | tig0016715:-333127 | Msa1359610:CDS |
| CTCATTTCACAAACCTCAGA+AGG | 0.515142 | tig0016715:+330459 | None:intergenic |
| TATTGCAAGGAATAGTATTG+AGG | 0.520684 | tig0016715:-333016 | Msa1359610:CDS |
| TGAATCTTGTTGTGTTGACA+TGG | 0.524137 | tig0016715:+333497 | None:intergenic |
| ATAGACCTGATATTGCATAT+AGG | 0.528384 | tig0016715:+330847 | None:intergenic |
| AATAAGGTGGATGCCTATGA+TGG | 0.535562 | tig0016715:-330727 | Msa1359610:CDS |
| TCCTAACAGAACCAATAGAA+TGG | 0.537468 | tig0016715:-333431 | Msa1359610:CDS |
| AGAGTTGAACTGTTGAAGGT+TGG | 0.538340 | tig0016715:+333274 | None:intergenic |
| CAGATAGGTTTAAGAATCCA+TGG | 0.538409 | tig0016715:+333231 | None:intergenic |
| CTAGTATATGGTATAGGCCA+AGG | 0.539645 | tig0016715:-333357 | Msa1359610:CDS |
| AGAGTGAGCCTGTGAAGCCT+TGG | 0.539998 | tig0016715:+333340 | None:intergenic |
| TGCAAATCAGGAGCCAACCC+TGG | 0.542040 | tig0016715:+332991 | None:intergenic |
| TCGGTTAGAATGCCCCAGAT+AGG | 0.542383 | tig0016715:+333216 | None:intergenic |
| ATGTGTATTGATAGCATTGG+TGG | 0.544527 | tig0016715:-330648 | Msa1359610:CDS |
| CTAAACCCAACATTCATAGC+AGG | 0.546989 | tig0016715:-333387 | Msa1359610:CDS |
| AATGTAGGAACGACAATTCG+AGG | 0.547125 | tig0016715:-331973 | Msa1359610:CDS |
| ACTTAATCTTCATTCTACGT+TGG | 0.547948 | tig0016715:-330821 | Msa1359610:CDS |
| CTTGCATAATGAAAAGAAGA+AGG | 0.548422 | tig0016715:-332169 | Msa1359610:intron |
| GATGCTGCTATAAGAATCAC+AGG | 0.548431 | tig0016715:-330753 | Msa1359610:CDS |
| AGAGGTACCTGAGAGAATGC+AGG | 0.554272 | tig0016715:+331826 | None:intergenic |
| CTTAATGTAACCACTCATGA+AGG | 0.563754 | tig0016715:-331883 | Msa1359610:CDS |
| TTAAAAGAACAGCCAACCAT+AGG | 0.564884 | tig0016715:+330556 | None:intergenic |
| TAGTATTGAGGTTCCAGGGT+TGG | 0.566971 | tig0016715:-333004 | Msa1359610:CDS |
| TGTGGGAGGTGAGGTGAGTG+TGG | 0.567101 | tig0016715:-333109 | Msa1359610:CDS |
| CGTTGCTGGAGTTGTTGGAA+CGG | 0.568419 | tig0016715:-333151 | Msa1359610:CDS |
| TGGTATACTGATTCTAAAGT+CGG | 0.568931 | tig0016715:-331850 | Msa1359610:CDS |
| TCTGCTACGATTGTTGCTGT+GGG | 0.569735 | tig0016715:-333126 | Msa1359610:CDS |
| GAGTGGTTACATTAAGAGCA+AGG | 0.572992 | tig0016715:+331890 | None:intergenic |
| CAATAAAGTATCCTCAAGCA+TGG | 0.577374 | tig0016715:-331939 | Msa1359610:CDS |
| TTATATCAAAATGGGGTGGA+GGG | 0.579386 | tig0016715:-330623 | Msa1359610:CDS |
| ATCAGTTCTAGTAACATGAA+GGG | 0.581853 | tig0016715:+330587 | None:intergenic |
| TGATATTGATGAAGAGACCT+TGG | 0.583427 | tig0016715:-330427 | Msa1359610:CDS |
| GAAAGGAACATGTAAAGTGA+TGG | 0.583589 | tig0016715:+331913 | None:intergenic |
| TGCAGTGGCTTCAATAATAG+GGG | 0.585973 | tig0016715:-330934 | Msa1359610:CDS |
| AATCTATGCAATTGGTGCAG+TGG | 0.592181 | tig0016715:-330949 | Msa1359610:CDS |
| AGTGATGGCTTCCATGCTTG+AGG | 0.593197 | tig0016715:+331928 | None:intergenic |
| TCTGTTAGGATTGATAACAA+TGG | 0.594770 | tig0016715:+333444 | None:intergenic |
| TTAATGTGTATTGATAGCAT+TGG | 0.600486 | tig0016715:-330651 | Msa1359610:CDS |
| TTACATTAAGAGCAAGGGAA+AGG | 0.602871 | tig0016715:+331896 | None:intergenic |
| GGAATAGTATTGAGGTTCCA+GGG | 0.603259 | tig0016715:-333008 | Msa1359610:CDS |
| GCTACGATTGTTGCTGTGGG+AGG | 0.603973 | tig0016715:-333123 | Msa1359610:CDS |
| AGTGGTTACATTAAGAGCAA+GGG | 0.607736 | tig0016715:+331891 | None:intergenic |
| TTCCAGTAATGGGATATCGT+CGG | 0.608018 | tig0016715:-333188 | Msa1359610:CDS |
| GAATCACAGGCAAAATAAGG+TGG | 0.610591 | tig0016715:-330740 | Msa1359610:CDS |
| TCCCATTACTGGAAAAGCGT+CGG | 0.613298 | tig0016715:+333197 | None:intergenic |
| TAGGAATATACTTCATACCA+TGG | 0.624013 | tig0016715:-333248 | Msa1359610:CDS |
| ATTTAAAGGAACAAGCTCCA+AGG | 0.627727 | tig0016715:+330410 | None:intergenic |
| GAGGTACCTGAGAGAATGCA+GGG | 0.635587 | tig0016715:+331827 | None:intergenic |
| GGCCTTATATCAAAATGGGG+TGG | 0.639767 | tig0016715:-330627 | Msa1359610:CDS |
| GATTGTTGCTGTGGGAGGTG+AGG | 0.648427 | tig0016715:-333118 | Msa1359610:CDS |
| GGGGTCGCTTGGTCTTATGG+CGG | 0.651608 | tig0016715:-332250 | Msa1359610:CDS |
| CAGTAATGGGATATCGTCGG+AGG | 0.679956 | tig0016715:-333185 | Msa1359610:CDS |
| TCAACAGTTCAACTCTACGT+AGG | 0.687400 | tig0016715:-333267 | Msa1359610:CDS |
| GGTGGCCTTATATCAAAATG+GGG | 0.688936 | tig0016715:-330630 | Msa1359610:CDS |
| TGGATTCTTAAACCTATCTG+GGG | 0.710158 | tig0016715:-333228 | Msa1359610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTGATAAATAAAAATGTTT+AGG | - | tig0016715:331090-331109 | Msa1359610:intron | 10.0% |
| !! | AGAATTAAACATACAAAATA+GGG | + | tig0016715:331026-331045 | None:intergenic | 15.0% |
| !! | TAGAATTAAACATACAAAAT+AGG | + | tig0016715:331027-331046 | None:intergenic | 15.0% |
| !!! | AATTTAGTTGATAAATCTTA+AGG | + | tig0016715:331456-331475 | None:intergenic | 15.0% |
| !! | TTAGTTAGTTAATGTTAAAT+TGG | - | tig0016715:331858-331877 | Msa1359610:CDS | 15.0% |
| !! | GCAAATGTAATTACTTATAA+GGG | + | tig0016715:331164-331183 | None:intergenic | 20.0% |
| !! | AGCAAATGTAATTACTTATA+AGG | + | tig0016715:331165-331184 | None:intergenic | 20.0% |
| !! | CTAAAAAATGATTAACATGA+TGG | + | tig0016715:331319-331338 | None:intergenic | 20.0% |
| !!! | CATCATGTTAATCATTTTTT+AGG | - | tig0016715:331317-331336 | Msa1359610:intron | 20.0% |
| !!! | CTGATTAAATACATTTTGTA+GGG | - | tig0016715:331881-331900 | Msa1359610:CDS | 20.0% |
| !!! | TGATTAAATACATTTTGTAG+GGG | - | tig0016715:331882-331901 | Msa1359610:CDS | 20.0% |
| !! | AATAAGGTGAAAAAAACTTA+TGG | - | tig0016715:332363-332382 | Msa1359610:intron | 20.0% |
| !!! | CTTTTAACATATAAGTACTT+AGG | + | tig0016715:332799-332818 | None:intergenic | 20.0% |
| !! | AACTCTATAAGAAAAAGAAA+TGG | + | tig0016715:332879-332898 | None:intergenic | 20.0% |
| ! | ATATTCCTAGTATATGGTAT+AGG | - | tig0016715:330524-330543 | Msa1359610:CDS | 25.0% |
| ! | AAAATAGAAAAACAAACCTG+AGG | + | tig0016715:331001-331020 | None:intergenic | 25.0% |
| ! | GCTATCAATAATTTGAATCA+TGG | - | tig0016715:331214-331233 | Msa1359610:intron | 25.0% |
| !!! | GAATCATGGTTTTAGTTTTT+AGG | - | tig0016715:331228-331247 | Msa1359610:intron | 25.0% |
| !!! | ATGGTTTTAGTTTTTAGGAT+TGG | - | tig0016715:331233-331252 | Msa1359610:intron | 25.0% |
| !! | ATTGAACGTTTTCAATTTCA+TGG | - | tig0016715:331381-331400 | Msa1359610:intron | 25.0% |
| !!! | AATGCTTCTGTTGTTATTTT+AGG | - | tig0016715:331616-331635 | Msa1359610:intron | 25.0% |
| !!! | ATGCTTCTGTTGTTATTTTA+GGG | - | tig0016715:331617-331636 | Msa1359610:intron | 25.0% |
| ! | ATAATGAAAAGAAGAAGGTT+AGG | - | tig0016715:331723-331742 | Msa1359610:intron | 25.0% |
| ! | TGTAAATAGGCTTATGAAAT+GGG | + | tig0016715:331767-331786 | None:intergenic | 25.0% |
| ! | TGATTTCACTTTGTGTAAAT+AGG | + | tig0016715:331780-331799 | None:intergenic | 25.0% |
| !! | GCTGATTAAATACATTTTGT+AGG | - | tig0016715:331880-331899 | Msa1359610:CDS | 25.0% |
| !! | GATTAAATACATTTTGTAGG+GGG | - | tig0016715:331883-331902 | Msa1359610:CDS | 25.0% |
| ! | AATCAGTATACCAGTAAAAA+TGG | + | tig0016715:332030-332049 | None:intergenic | 25.0% |
| !!! | TCCCATATTTTGTTTATAGA+TGG | - | tig0016715:332556-332575 | Msa1359610:intron | 25.0% |
| ! | GCCATCTATAAACAAAATAT+GGG | + | tig0016715:332560-332579 | None:intergenic | 25.0% |
| ! | AGCCATCTATAAACAAAATA+TGG | + | tig0016715:332561-332580 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACATCTTA+TGG | + | tig0016715:332681-332700 | None:intergenic | 25.0% |
| ! | ACATATAAGTACTTAGGTAT+AGG | + | tig0016715:332793-332812 | None:intergenic | 25.0% |
| !!! | TGTAGTTTTTTAGATACTTG+TGG | + | tig0016715:332989-333008 | None:intergenic | 25.0% |
| !! | TTAATGTGTATTGATAGCAT+TGG | - | tig0016715:333236-333255 | Msa1359610:CDS | 25.0% |
| !!! | TAGATTTGTTACACTTGTTT+TGG | - | tig0016715:333364-333383 | Msa1359610:CDS | 25.0% |
| !! | TTTTTCTTGTTCCTAATGTT+GGG | - | tig0016715:333387-333406 | Msa1359610:CDS | 25.0% |
| ! | TCTGTTAGGATTGATAACAA+TGG | + | tig0016715:330446-330465 | None:intergenic | 30.0% |
| ATATTCCTGCTATGAATGTT+GGG | + | tig0016715:330508-330527 | None:intergenic | 30.0% | |
| AATATTCCTGCTATGAATGT+TGG | + | tig0016715:330509-330528 | None:intergenic | 30.0% | |
| ! | AACTAGTCACTGATTACTAT+TGG | - | tig0016715:330573-330592 | Msa1359610:CDS | 30.0% |
| TAGGAATATACTTCATACCA+TGG | - | tig0016715:330639-330658 | Msa1359610:CDS | 30.0% | |
| ATGGATTCTTAAACCTATCT+GGG | - | tig0016715:330658-330677 | Msa1359610:CDS | 30.0% | |
| TATTGCAAGGAATAGTATTG+AGG | - | tig0016715:330871-330890 | Msa1359610:CDS | 30.0% | |
| !! | AGTTCTGAGATTGTATAGAA+TGG | - | tig0016715:331351-331370 | Msa1359610:intron | 30.0% |
| !!! | TGCTTCTGTTGTTATTTTAG+GGG | - | tig0016715:331618-331637 | Msa1359610:intron | 30.0% |
| CTTGCATAATGAAAAGAAGA+AGG | - | tig0016715:331718-331737 | Msa1359610:intron | 30.0% | |
| GTGTAAATAGGCTTATGAAA+TGG | + | tig0016715:331768-331787 | None:intergenic | 30.0% | |
| !! | TGGTATACTGATTCTAAAGT+CGG | - | tig0016715:332037-332056 | Msa1359610:intron | 30.0% |
| TCAATTTCCCAAAATATGAG+AGG | + | tig0016715:332082-332101 | None:intergenic | 30.0% | |
| ! | ACATTTTGTATTCAATTGCC+TGG | - | tig0016715:332183-332202 | Msa1359610:CDS | 30.0% |
| CTAGAGAGCTTATAGAAATA+AGG | - | tig0016715:332347-332366 | Msa1359610:intron | 30.0% | |
| AACTTTGTATGCAATTGCTT+AGG | - | tig0016715:332484-332503 | Msa1359610:intron | 30.0% | |
| ! | TCTTTTGATATAAACGCTTG+TGG | - | tig0016715:332615-332634 | Msa1359610:intron | 30.0% |
| !!! | TCACTTTTTTAGTCTCTGTT+TGG | + | tig0016715:332842-332861 | None:intergenic | 30.0% |
| GTTGGTATAATCTATGCAAT+TGG | - | tig0016715:332930-332949 | Msa1359610:CDS | 30.0% | |
| ATAGACCTGATATTGCATAT+AGG | + | tig0016715:333043-333062 | None:intergenic | 30.0% | |
| ATATGCAATATCAGGTCTAT+TGG | - | tig0016715:333043-333062 | Msa1359610:CDS | 30.0% | |
| ACTTAATCTTCATTCTACGT+TGG | - | tig0016715:333066-333085 | Msa1359610:CDS | 30.0% | |
| CTACGTTGGAATTTGAAAAT+TGG | - | tig0016715:333080-333099 | Msa1359610:CDS | 30.0% | |
| ATGACAACAAAAAAGTAGTC+AGG | + | tig0016715:333110-333129 | None:intergenic | 30.0% | |
| TAAGAATCACAGGCAAAATA+AGG | - | tig0016715:333144-333163 | Msa1359610:CDS | 30.0% | |
| AATGTTCCTTCAATTCCTAA+TGG | + | tig0016715:333206-333225 | None:intergenic | 30.0% | |
| ! | ATCAGTTCTAGTAACATGAA+GGG | + | tig0016715:333303-333322 | None:intergenic | 30.0% |
| ! | AATCAGTTCTAGTAACATGA+AGG | + | tig0016715:333304-333323 | None:intergenic | 30.0% |
| !! | GAACTGATTTTACTAACCTA+TGG | - | tig0016715:333315-333334 | Msa1359610:CDS | 30.0% |
| ! | TGATTTTACTAACCTATGGT+TGG | - | tig0016715:333319-333338 | Msa1359610:CDS | 30.0% |
| ! | GTTTTTCTTGTTCCTAATGT+TGG | - | tig0016715:333386-333405 | Msa1359610:CDS | 30.0% |
| !! | ACTTCAGTTTTGGCATTTAA+AGG | + | tig0016715:333494-333513 | None:intergenic | 30.0% |
| TCCTAACAGAACCAATAGAA+TGG | - | tig0016715:330456-330475 | Msa1359610:CDS | 35.0% | |
| !! | AGCATTGATAGCCATTCTAT+TGG | + | tig0016715:330470-330489 | None:intergenic | 35.0% |
| GCAGGAATATTCCTAGTATA+TGG | - | tig0016715:330518-330537 | Msa1359610:CDS | 35.0% | |
| CAGATAGGTTTAAGAATCCA+TGG | + | tig0016715:330659-330678 | None:intergenic | 35.0% | |
| CATGGATTCTTAAACCTATC+TGG | - | tig0016715:330657-330676 | Msa1359610:CDS | 35.0% | |
| TGGATTCTTAAACCTATCTG+GGG | - | tig0016715:330659-330678 | Msa1359610:CDS | 35.0% | |
| CTATTGATGCTTGTATTGCA+AGG | - | tig0016715:330858-330877 | Msa1359610:CDS | 35.0% | |
| GGTTTCTTTGTTCATCATCT+TGG | - | tig0016715:330974-330993 | Msa1359610:intron | 35.0% | |
| ATTACTTATAAGGGCTCTCT+GGG | + | tig0016715:331155-331174 | None:intergenic | 35.0% | |
| AATTACTTATAAGGGCTCTC+TGG | + | tig0016715:331156-331175 | None:intergenic | 35.0% | |
| ATATCGTAATGTCTGATGAG+TGG | - | tig0016715:331593-331612 | Msa1359610:intron | 35.0% | |
| ATCTATGAAAAGAGAACCAC+TGG | - | tig0016715:331695-331714 | Msa1359610:intron | 35.0% | |
| ! | CAATAAAGTATCCTCAAGCA+TGG | - | tig0016715:331948-331967 | Msa1359610:CDS | 35.0% |
| GAAAGGAACATGTAAAGTGA+TGG | + | tig0016715:331977-331996 | None:intergenic | 35.0% | |
| TTACATTAAGAGCAAGGGAA+AGG | + | tig0016715:331994-332013 | None:intergenic | 35.0% | |
| AGTGGTTACATTAAGAGCAA+GGG | + | tig0016715:331999-332018 | None:intergenic | 35.0% | |
| CTTAATGTAACCACTCATGA+AGG | - | tig0016715:332004-332023 | Msa1359610:intron | 35.0% | |
| ! | TCAGGTACCTCTCATATTTT+GGG | - | tig0016715:332072-332091 | Msa1359610:intron | 35.0% |
| AGTCATTACAGTTGAGATCT+CGG | - | tig0016715:332117-332136 | Msa1359610:intron | 35.0% | |
| TTGTATTCAATTGCCTGGAT+TGG | - | tig0016715:332188-332207 | Msa1359610:CDS | 35.0% | |
| AAAACTTATGGACATGTCAG+AGG | - | tig0016715:332375-332394 | Msa1359610:intron | 35.0% | |
| AGATCTTAACTGCAGTTACT+AGG | + | tig0016715:332423-332442 | None:intergenic | 35.0% | |
| AGTAACTGCAGTTAAGATCT+CGG | - | tig0016715:332423-332442 | Msa1359610:intron | 35.0% | |
| GCATACAAAGTTCAGTACAT+CGG | + | tig0016715:332476-332495 | None:intergenic | 35.0% | |
| CTAATGGGATTTCTGAATAC+AGG | - | tig0016715:332524-332543 | Msa1359610:intron | 35.0% | |
| TCACATAACTCAATCCAAAC+AGG | + | tig0016715:332590-332609 | None:intergenic | 35.0% | |
| CTGAAAACATCTTATGGACA+TGG | + | tig0016715:332675-332694 | None:intergenic | 35.0% | |
| ! | TTATTTTCGTAAGCTCCTGA+AGG | - | tig0016715:332696-332715 | Msa1359610:intron | 35.0% |
| ! | TGTTTTCATTAGCTACCTTC+AGG | + | tig0016715:332714-332733 | None:intergenic | 35.0% |
| CAAACTCCTGCATATTCAAA+GGG | + | tig0016715:332911-332930 | None:intergenic | 35.0% | |
| ACAAACTCCTGCATATTCAA+AGG | + | tig0016715:332912-332931 | None:intergenic | 35.0% | |
| TTGAATATGCAGGAGTTTGT+TGG | - | tig0016715:332912-332931 | Msa1359610:CDS | 35.0% | |
| CAACTCCTATATGCAATATC+AGG | - | tig0016715:333035-333054 | Msa1359610:CDS | 35.0% | |
| TTTGTGCTTAGTACCATCAT+AGG | + | tig0016715:333176-333195 | None:intergenic | 35.0% | |
| AGCACAAAACTATGTCCATT+AGG | - | tig0016715:333188-333207 | Msa1359610:CDS | 35.0% | |
| CTATGTCCATTAGGAATTGA+AGG | - | tig0016715:333197-333216 | Msa1359610:CDS | 35.0% | |
| ! | ATGTGTATTGATAGCATTGG+TGG | - | tig0016715:333239-333258 | Msa1359610:CDS | 35.0% |
| !! | TTGGTGGCCTTATATCAAAA+TGG | - | tig0016715:333255-333274 | Msa1359610:CDS | 35.0% |
| !! | TGGTGGCCTTATATCAAAAT+GGG | - | tig0016715:333256-333275 | Msa1359610:CDS | 35.0% |
| TTATATCAAAATGGGGTGGA+GGG | - | tig0016715:333264-333283 | Msa1359610:CDS | 35.0% | |
| TTAAAAGAACAGCCAACCAT+AGG | + | tig0016715:333334-333353 | None:intergenic | 35.0% | |
| TGATATTGATGAAGAGACCT+TGG | - | tig0016715:333460-333479 | Msa1359610:CDS | 35.0% | |
| ATTTAAAGGAACAAGCTCCA+AGG | + | tig0016715:333480-333499 | None:intergenic | 35.0% | |
| !! | GCCATTCTATTGGTTCTGTT+AGG | + | tig0016715:330460-330479 | None:intergenic | 40.0% |
| CTGCTATGAATGTTGGGTTT+AGG | + | tig0016715:330502-330521 | None:intergenic | 40.0% | |
| CTAAACCCAACATTCATAGC+AGG | - | tig0016715:330500-330519 | Msa1359610:CDS | 40.0% | |
| CTTGGCCTATACCATATACT+AGG | + | tig0016715:330532-330551 | None:intergenic | 40.0% | |
| CTAGTATATGGTATAGGCCA+AGG | - | tig0016715:330530-330549 | Msa1359610:CDS | 40.0% | |
| AGAGTTGAACTGTTGAAGGT+TGG | + | tig0016715:330616-330635 | None:intergenic | 40.0% | |
| ACGTAGAGTTGAACTGTTGA+AGG | + | tig0016715:330620-330639 | None:intergenic | 40.0% | |
| TCAACAGTTCAACTCTACGT+AGG | - | tig0016715:330620-330639 | Msa1359610:CDS | 40.0% | |
| ! | TTCCAGTAATGGGATATCGT+CGG | - | tig0016715:330699-330718 | Msa1359610:CDS | 40.0% |
| ACTCCAGCAACGACAAAATA+AGG | + | tig0016715:330728-330747 | None:intergenic | 40.0% | |
| ! | AGGAATAGTATTGAGGTTCC+AGG | - | tig0016715:330878-330897 | Msa1359610:CDS | 40.0% |
| ! | GGAATAGTATTGAGGTTCCA+GGG | - | tig0016715:330879-330898 | Msa1359610:CDS | 40.0% |
| ! | CTGATTTGCAGAGTTTGTGT+GGG | - | tig0016715:330909-330928 | Msa1359610:CDS | 40.0% |
| !!! | AGTTTGTGTGGGTTTTGTTC+TGG | - | tig0016715:330920-330939 | Msa1359610:CDS | 40.0% |
| CTTCTTGGTTATCTTGCTAG+TGG | - | tig0016715:330953-330972 | Msa1359610:CDS | 40.0% | |
| TCAGGGTTAGAAAAGTCTCA+AGG | - | tig0016715:331129-331148 | Msa1359610:intron | 40.0% | |
| AGGATTGGAGTTGAGCAATT+TGG | - | tig0016715:331248-331267 | Msa1359610:intron | 40.0% | |
| TTGGAGTTGAGCAATTTGGT+TGG | - | tig0016715:331252-331271 | Msa1359610:intron | 40.0% | |
| AAAGAACTGCTGTACTGTAC+AGG | + | tig0016715:331501-331520 | None:intergenic | 40.0% | |
| !!! | TTGTTATTTTAGGGGTCGCT+TGG | - | tig0016715:331626-331645 | Msa1359610:intron | 40.0% |
| ! | TCCTGCATTGACAATTGTTC+TGG | - | tig0016715:331664-331683 | Msa1359610:intron | 40.0% |
| ! | CCTGCATTGACAATTGTTCT+GGG | - | tig0016715:331665-331684 | Msa1359610:intron | 40.0% |
| ! | CTTTTCATTATGCAAGCCAG+TGG | + | tig0016715:331714-331733 | None:intergenic | 40.0% |
| ! | ATACATTTTGTAGGGGGTAG+TGG | - | tig0016715:331889-331908 | Msa1359610:CDS | 40.0% |
| AATGTAGGAACGACAATTCG+AGG | - | tig0016715:331914-331933 | Msa1359610:CDS | 40.0% | |
| GAGTGGTTACATTAAGAGCA+AGG | + | tig0016715:332000-332019 | None:intergenic | 40.0% | |
| GTAAAAATGGCCTTCATGAG+TGG | + | tig0016715:332017-332036 | None:intergenic | 40.0% | |
| !!! | CTCATGAAGGCCATTTTTAC+TGG | - | tig0016715:332017-332036 | Msa1359610:intron | 40.0% |
| ! | CTCAGGTACCTCTCATATTT+TGG | - | tig0016715:332071-332090 | Msa1359610:intron | 40.0% |
| ACAGTTGAGATCTCGGTTAT+TGG | - | tig0016715:332124-332143 | Msa1359610:intron | 40.0% | |
| CTGCAGTTACTAGGTACTAA+TGG | + | tig0016715:332414-332433 | None:intergenic | 40.0% | |
| GGCTATTGATGAACATCAGA+CGG | - | tig0016715:332444-332463 | Msa1359610:intron | 40.0% | |
| TAGCTAACTGCAGTGACTAA+TGG | - | tig0016715:332508-332527 | Msa1359610:intron | 40.0% | |
| AGCTAACTGCAGTGACTAAT+GGG | - | tig0016715:332509-332528 | Msa1359610:intron | 40.0% | |
| AGATGGCTAAAAGACCTGTT+TGG | - | tig0016715:332573-332592 | Msa1359610:intron | 40.0% | |
| TTTCCTCCCTTTGAATATGC+AGG | - | tig0016715:332902-332921 | Msa1359610:intron | 40.0% | |
| AATCTATGCAATTGGTGCAG+TGG | - | tig0016715:332938-332957 | Msa1359610:CDS | 40.0% | |
| GTGCAGTGGCTTCAATAATA+GGG | - | tig0016715:332952-332971 | Msa1359610:CDS | 40.0% | |
| TGCAGTGGCTTCAATAATAG+GGG | - | tig0016715:332953-332972 | Msa1359610:CDS | 40.0% | |
| GATGCTGCTATAAGAATCAC+AGG | - | tig0016715:333134-333153 | Msa1359610:CDS | 40.0% | |
| GAATCACAGGCAAAATAAGG+TGG | - | tig0016715:333147-333166 | Msa1359610:CDS | 40.0% | |
| AATAAGGTGGATGCCTATGA+TGG | - | tig0016715:333160-333179 | Msa1359610:CDS | 40.0% | |
| !! | GGTGGCCTTATATCAAAATG+GGG | - | tig0016715:333257-333276 | Msa1359610:CDS | 40.0% |
| !! | CTCCACCCCATTTTGATATA+AGG | + | tig0016715:333265-333284 | None:intergenic | 40.0% |
| CTTATATCAAAATGGGGTGG+AGG | - | tig0016715:333263-333282 | Msa1359610:CDS | 40.0% | |
| GAAGGAATCAACTCCTCATA+AGG | + | tig0016715:333413-333432 | None:intergenic | 40.0% | |
| CTCATTTCACAAACCTCAGA+AGG | + | tig0016715:333431-333450 | None:intergenic | 40.0% | |
| ! | AACCGACGCTTTTCCAGTAA+TGG | - | tig0016715:330688-330707 | Msa1359610:CDS | 45.0% |
| ! | ACCGACGCTTTTCCAGTAAT+GGG | - | tig0016715:330689-330708 | Msa1359610:CDS | 45.0% |
| ! | TCCCATTACTGGAAAAGCGT+CGG | + | tig0016715:330693-330712 | None:intergenic | 45.0% |
| !!! | AGGCCTTATTTTGTCGTTGC+TGG | - | tig0016715:330722-330741 | Msa1359610:CDS | 45.0% |
| TTTGTCGTTGCTGGAGTTGT+TGG | - | tig0016715:330731-330750 | Msa1359610:CDS | 45.0% | |
| TCTGCTACGATTGTTGCTGT+GGG | - | tig0016715:330761-330780 | Msa1359610:CDS | 45.0% | |
| ! | TAGTATTGAGGTTCCAGGGT+TGG | - | tig0016715:330883-330902 | Msa1359610:CDS | 45.0% |
| CCACACAAACTCTGCAAATC+AGG | + | tig0016715:330911-330930 | None:intergenic | 45.0% | |
| ! | CCTGATTTGCAGAGTTTGTG+TGG | - | tig0016715:330908-330927 | Msa1359610:CDS | 45.0% |
| !!! | TGTGGGTTTTGTTCTGGTTC+TGG | - | tig0016715:330926-330945 | Msa1359610:CDS | 45.0% |
| TGTTCATCATCTTGGTCCTC+AGG | - | tig0016715:330982-331001 | Msa1359610:intron | 45.0% | |
| CCCAGAACAATTGTCAATGC+AGG | + | tig0016715:331668-331687 | None:intergenic | 45.0% | |
| !! | TAGGGGGTAGTGGAAAATGT+AGG | - | tig0016715:331899-331918 | Msa1359610:CDS | 45.0% |
| ACTCCTGCATATTCAAAGGG+AGG | + | tig0016715:332908-332927 | None:intergenic | 45.0% | |
| GGTGCAGTGGCTTCAATAAT+AGG | - | tig0016715:332951-332970 | Msa1359610:CDS | 45.0% | |
| ! | GGCCTTATATCAAAATGGGG+TGG | - | tig0016715:333260-333279 | Msa1359610:CDS | 45.0% |
| ! | TCCTAATGTTGGGCCTTATG+AGG | - | tig0016715:333397-333416 | Msa1359610:CDS | 45.0% |
| TCCTCATAAGGCCCAACATT+AGG | + | tig0016715:333401-333420 | None:intergenic | 45.0% | |
| ! | TGAGGAGTTGATTCCTTCTG+AGG | - | tig0016715:333415-333434 | Msa1359610:CDS | 45.0% |
| TCGGTTAGAATGCCCCAGAT+AGG | + | tig0016715:330674-330693 | None:intergenic | 50.0% | |
| CTCCGACGATATCCCATTAC+TGG | + | tig0016715:330704-330723 | None:intergenic | 50.0% | |
| ! | CAGTAATGGGATATCGTCGG+AGG | - | tig0016715:330702-330721 | Msa1359610:CDS | 50.0% |
| CGTTGCTGGAGTTGTTGGAA+CGG | - | tig0016715:330736-330755 | Msa1359610:CDS | 50.0% | |
| GTCTGCTACGATTGTTGCTG+TGG | - | tig0016715:330760-330779 | Msa1359610:CDS | 50.0% | |
| !!! | GCGGCGTTGATGTGTTTTGT+TGG | - | tig0016715:330803-330822 | Msa1359610:CDS | 50.0% |
| !! | TCTGGTTCTGGTGCTCTTCT+TGG | - | tig0016715:330938-330957 | Msa1359610:CDS | 50.0% |
| GTTAGTCGTGTCACGACTCA+GGG | - | tig0016715:331112-331131 | Msa1359610:intron | 50.0% | |
| !! | TTAGGGGTCGCTTGGTCTTA+TGG | - | tig0016715:331634-331653 | Msa1359610:intron | 50.0% |
| AGTGATGGCTTCCATGCTTG+AGG | + | tig0016715:331962-331981 | None:intergenic | 50.0% | |
| ! | GAGGTACCTGAGAGAATGCA+GGG | + | tig0016715:332063-332082 | None:intergenic | 50.0% |
| !! | AGAGGTACCTGAGAGAATGC+AGG | + | tig0016715:332064-332083 | None:intergenic | 50.0% |
| TCACTGCAGGTAACCAATCC+AGG | + | tig0016715:332204-332223 | None:intergenic | 50.0% | |
| GGTATAGGCCAAGGCTTCAC+AGG | - | tig0016715:330539-330558 | Msa1359610:CDS | 55.0% | |
| AGAGTGAGCCTGTGAAGCCT+TGG | + | tig0016715:330550-330569 | None:intergenic | 55.0% | |
| GCTACGATTGTTGCTGTGGG+AGG | - | tig0016715:330764-330783 | Msa1359610:CDS | 55.0% | |
| GATTGTTGCTGTGGGAGGTG+AGG | - | tig0016715:330769-330788 | Msa1359610:CDS | 55.0% | |
| AGGTGAGGTGAGTGTGGTTG+CGG | - | tig0016715:330784-330803 | Msa1359610:CDS | 55.0% | |
| TGCAAATCAGGAGCCAACCC+TGG | + | tig0016715:330899-330918 | None:intergenic | 55.0% | |
| ! | GGTTAGTCGTGTCACGACTC+AGG | - | tig0016715:331111-331130 | Msa1359610:intron | 55.0% |
| TGGTTACCTGCAGTGACTGC+TGG | - | tig0016715:332208-332227 | Msa1359610:CDS | 55.0% | |
| GGTTACCTGCAGTGACTGCT+GGG | - | tig0016715:332209-332228 | Msa1359610:CDS | 55.0% | |
| GTTACCTGCAGTGACTGCTG+GGG | - | tig0016715:332210-332229 | Msa1359610:CDS | 55.0% | |
| CTGCTGGGGTTTCTGATTGC+AGG | - | tig0016715:332224-332243 | Msa1359610:CDS | 55.0% | |
| TGTGGGAGGTGAGGTGAGTG+TGG | - | tig0016715:330778-330797 | Msa1359610:CDS | 60.0% | |
| !! | GGGGTCGCTTGGTCTTATGG+CGG | - | tig0016715:331637-331656 | Msa1359610:intron | 60.0% |
| AGTCGGCCCTGCATTCTCTC+AGG | - | tig0016715:332054-332073 | Msa1359610:intron | 60.0% | |
| GAAACCCCAGCAGTCACTGC+AGG | + | tig0016715:332217-332236 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016715 | gene | 330392 | 333517 | 330392 | ID=Msa1359610;Name=Msa1359610 |
| tig0016715 | mRNA | 330392 | 333517 | 330392 | ID=Msa1359610-mRNA-1;Parent=Msa1359610;Name=Msa1359610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.5|1|1|1|4|0|493 |
| tig0016715 | exon | 332906 | 333517 | 332906 | ID=Msa1359610-mRNA-1:exon:11521;Parent=Msa1359610-mRNA-1 |
| tig0016715 | exon | 332170 | 332271 | 332170 | ID=Msa1359610-mRNA-1:exon:11520;Parent=Msa1359610-mRNA-1 |
| tig0016715 | exon | 331834 | 332007 | 331834 | ID=Msa1359610-mRNA-1:exon:11519;Parent=Msa1359610-mRNA-1 |
| tig0016715 | exon | 330392 | 330985 | 330392 | ID=Msa1359610-mRNA-1:exon:11518;Parent=Msa1359610-mRNA-1 |
| tig0016715 | CDS | 332906 | 333517 | 332906 | ID=Msa1359610-mRNA-1:cds;Parent=Msa1359610-mRNA-1 |
| tig0016715 | CDS | 332170 | 332271 | 332170 | ID=Msa1359610-mRNA-1:cds;Parent=Msa1359610-mRNA-1 |
| tig0016715 | CDS | 331834 | 332007 | 331834 | ID=Msa1359610-mRNA-1:cds;Parent=Msa1359610-mRNA-1 |
| tig0016715 | CDS | 330392 | 330985 | 330392 | ID=Msa1359610-mRNA-1:cds;Parent=Msa1359610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
