Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769720 | XP_013452693.1 | 97.243 | 399 | 8 | 1 | 1 | 396 | 1 | 399 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769720 | A0A072UB96 | 97.243 | 399 | 8 | 1 | 1 | 396 | 1 | 399 | 0.0 | 803 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0769720 | 0.809864 | 1.532468e-50 | -8.615850e-47 |
| Msa0001830 | Msa0769720 | 0.812178 | 4.831868e-51 | -8.615850e-47 |
| Msa0004480 | Msa0769720 | 0.884886 | 1.306540e-71 | -8.615850e-47 |
| Msa0005260 | Msa0769720 | 0.809520 | 1.817011e-50 | -8.615850e-47 |
| Msa0011050 | Msa0769720 | 0.818994 | 1.465671e-52 | -8.615850e-47 |
| Msa0026630 | Msa0769720 | 0.822562 | 2.217150e-53 | -8.615850e-47 |
| Msa0043850 | Msa0769720 | 0.848098 | 7.609156e-60 | -8.615850e-47 |
| Msa0052360 | Msa0769720 | 0.807720 | 4.403011e-50 | -8.615850e-47 |
| Msa0059900 | Msa0769720 | 0.829046 | 6.409343e-55 | -8.615850e-47 |
| Msa0061500 | Msa0769720 | 0.801664 | 8.091410e-49 | -8.615850e-47 |
| Msa0064140 | Msa0769720 | 0.822810 | 1.940504e-53 | -8.615850e-47 |
| Msa0071480 | Msa0769720 | 0.845845 | 3.149398e-59 | -8.615850e-47 |
| Msa0090380 | Msa0769720 | 0.828045 | 1.118256e-54 | -8.615850e-47 |
| Msa0090510 | Msa0769720 | 0.832980 | 6.933386e-56 | -8.615850e-47 |
| Msa0092410 | Msa0769720 | 0.800594 | 1.339476e-48 | -8.615850e-47 |
| Msa0104810 | Msa0769720 | 0.831697 | 1.440862e-55 | -8.615850e-47 |
| Msa0119430 | Msa0769720 | 0.837983 | 3.766282e-57 | -8.615850e-47 |
| Msa0119440 | Msa0769720 | 0.850423 | 1.714666e-60 | -8.615850e-47 |
| Msa0604570 | Msa0769720 | 0.838373 | 2.988484e-57 | -8.615850e-47 |
| Msa0628810 | Msa0769720 | 0.820659 | 6.103966e-53 | -8.615850e-47 |
| Msa0631320 | Msa0769720 | 0.848044 | 7.875383e-60 | -8.615850e-47 |
| Msa0645560 | Msa0769720 | 0.819538 | 1.102133e-52 | -8.615850e-47 |
| Msa0669700 | Msa0769720 | 0.824145 | 9.460627e-54 | -8.615850e-47 |
| Msa0669740 | Msa0769720 | 0.811294 | 7.523655e-51 | -8.615850e-47 |
| Msa0679670 | Msa0769720 | 0.810083 | 1.375102e-50 | -8.615850e-47 |
| Msa0729350 | Msa0769720 | 0.872695 | 2.609821e-67 | -8.615850e-47 |
| Msa0734940 | Msa0769720 | 0.839955 | 1.162575e-57 | -8.615850e-47 |
| Msa0748660 | Msa0769720 | 0.815597 | 8.521123e-52 | -8.615850e-47 |
| Msa0764920 | Msa0769720 | 0.814039 | 1.887495e-51 | -8.615850e-47 |
| Msa0769720 | Msa0771950 | 0.802108 | 6.561099e-49 | -8.615850e-47 |
| Msa0769720 | Msa0775560 | 0.801230 | 9.932653e-49 | -8.615850e-47 |
| Msa0769720 | Msa0794350 | 0.822420 | 2.391492e-53 | -8.615850e-47 |
| Msa0769720 | Msa0802240 | 0.806806 | 6.878158e-50 | -8.615850e-47 |
| Msa0769720 | Msa0807670 | 0.872471 | 3.099891e-67 | -8.615850e-47 |
| Msa0769720 | Msa0807680 | 0.879969 | 8.068812e-70 | -8.615850e-47 |
| Msa0769720 | Msa0812530 | 0.803799 | 2.933128e-49 | -8.615850e-47 |
| Msa0769720 | Msa0812950 | 0.815906 | 7.272586e-52 | -8.615850e-47 |
| Msa0769720 | Msa0823540 | 0.803553 | 3.300156e-49 | -8.615850e-47 |
| Msa0769720 | Msa0848440 | 0.822645 | 2.120749e-53 | -8.615850e-47 |
| Msa0769720 | Msa0852790 | 0.808673 | 2.758658e-50 | -8.615850e-47 |
| Msa0769720 | Msa0853440 | 0.817353 | 3.446803e-52 | -8.615850e-47 |
| Msa0769720 | Msa0860250 | 0.800087 | 1.698729e-48 | -8.615850e-47 |
| Msa0769720 | Msa0862620 | 0.812944 | 3.284670e-51 | -8.615850e-47 |
| Msa0769720 | Msa0863720 | 0.803722 | 3.043770e-49 | -8.615850e-47 |
| Msa0769720 | Msa0930740 | 0.801289 | 9.660829e-49 | -8.615850e-47 |
| Msa0769720 | Msa0945130 | 0.840211 | 9.970210e-58 | -8.615850e-47 |
| Msa0769720 | Msa0968050 | 0.860455 | 2.041636e-63 | -8.615850e-47 |
| Msa0769720 | Msa1016960 | 0.801817 | 7.527723e-49 | -8.615850e-47 |
| Msa0769720 | Msa1023310 | 0.824976 | 6.027858e-54 | -8.615850e-47 |
| Msa0769720 | Msa1043120 | 0.815838 | 7.530152e-52 | -8.615850e-47 |
| Msa0769720 | Msa1044510 | 0.822696 | 2.063077e-53 | -8.615850e-47 |
| Msa0769720 | Msa1062040 | 0.851816 | 6.934055e-61 | -8.615850e-47 |
| Msa0769720 | Msa1063370 | 0.808147 | 3.571831e-50 | -8.615850e-47 |
| Msa0769720 | Msa1063410 | 0.803517 | 3.356278e-49 | -8.615850e-47 |
| Msa0769720 | Msa1064510 | 0.816115 | 6.530778e-52 | -8.615850e-47 |
| Msa0769720 | Msa1070540 | 0.807768 | 4.302097e-50 | -8.615850e-47 |
| Msa0769720 | Msa1082520 | 0.801180 | 1.016722e-48 | -8.615850e-47 |
| Msa0769720 | Msa1089190 | 0.861322 | 1.112844e-63 | -8.615850e-47 |
| Msa0769720 | Msa1101240 | 0.804803 | 1.812806e-49 | -8.615850e-47 |
| Msa0769720 | Msa1107200 | 0.841563 | 4.403691e-58 | -8.615850e-47 |
| Msa0769720 | Msa1108720 | 0.827565 | 1.458572e-54 | -8.615850e-47 |
| Msa0769720 | Msa1109670 | 0.854668 | 1.055778e-61 | -8.615850e-47 |
| Msa0769720 | Msa1109810 | 0.809198 | 2.130276e-50 | -8.615850e-47 |
| Msa0769720 | Msa1113100 | 0.809843 | 1.548389e-50 | -8.615850e-47 |
| Msa0769720 | Msa1123720 | 0.802764 | 4.805495e-49 | -8.615850e-47 |
| Msa0769720 | Msa1131790 | 0.825032 | 5.847169e-54 | -8.615850e-47 |
| Msa0769720 | Msa1150780 | 0.843365 | 1.465472e-58 | -8.615850e-47 |
| Msa0769720 | Msa1150800 | 0.805874 | 1.081319e-49 | -8.615850e-47 |
| Msa0769720 | Msa1152410 | 0.803920 | 2.768957e-49 | -8.615850e-47 |
| Msa0769720 | Msa1153230 | 0.840168 | 1.022786e-57 | -8.615850e-47 |
| Msa0769720 | Msa1156820 | 0.803498 | 3.388352e-49 | -8.615850e-47 |
| Msa0769720 | Msa1180720 | 0.800713 | 1.266960e-48 | -8.615850e-47 |
| Msa0769720 | Msa1181060 | 0.828675 | 7.879723e-55 | -8.615850e-47 |
| Msa0769720 | Msa1183140 | 0.849484 | 3.138993e-60 | -8.615850e-47 |
| Msa0769720 | Msa1188350 | 0.811797 | 5.848997e-51 | -8.615850e-47 |
| Msa0769720 | Msa1212470 | 0.835623 | 1.507000e-56 | -8.615850e-47 |
| Msa0769720 | Msa1218160 | 0.862113 | 6.378443e-64 | -8.615850e-47 |
| Msa0769720 | Msa1220880 | 0.800636 | 1.313563e-48 | -8.615850e-47 |
| Msa0769720 | Msa1225580 | 0.841461 | 4.686931e-58 | -8.615850e-47 |
| Msa0769720 | Msa1229480 | 0.827896 | 1.214218e-54 | -8.615850e-47 |
| Msa0769720 | Msa1231190 | 0.833931 | 4.017027e-56 | -8.615850e-47 |
| Msa0769720 | Msa1238680 | 0.848206 | 7.106084e-60 | -8.615850e-47 |
| Msa0769720 | Msa1246780 | 0.816547 | 5.228271e-52 | -8.615850e-47 |
| Msa0769720 | Msa1246790 | 0.825585 | 4.326753e-54 | -8.615850e-47 |
| Msa0769720 | Msa1252810 | 0.804485 | 2.112030e-49 | -8.615850e-47 |
| Msa0769720 | Msa1260060 | 0.838618 | 2.583341e-57 | -8.615850e-47 |
| Msa0769720 | Msa1260680 | 0.835313 | 1.804838e-56 | -8.615850e-47 |
| Msa0769720 | Msa1277780 | 0.816121 | 6.509165e-52 | -8.615850e-47 |
| Msa0769720 | Msa1280170 | 0.833124 | 6.384320e-56 | -8.615850e-47 |
| Msa0769720 | Msa1285200 | 0.855480 | 6.134254e-62 | -8.615850e-47 |
| Msa0769720 | Msa1286210 | 0.814195 | 1.743777e-51 | -8.615850e-47 |
| Msa0769720 | Msa1286220 | 0.843786 | 1.131205e-58 | -8.615850e-47 |
| Msa0769720 | Msa1299780 | 0.842925 | 1.919633e-58 | -8.615850e-47 |
| Msa0769720 | Msa1307160 | 0.803042 | 4.209389e-49 | -8.615850e-47 |
| Msa0769720 | Msa1309760 | 0.844295 | 8.261362e-59 | -8.615850e-47 |
| Msa0769720 | Msa1312440 | 0.820185 | 7.839401e-53 | -8.615850e-47 |
| Msa0769720 | Msa1329900 | 0.823259 | 1.525357e-53 | -8.615850e-47 |
| Msa0769720 | Msa1334840 | 0.825004 | 5.937152e-54 | -8.615850e-47 |
| Msa0769720 | Msa1349860 | 0.800573 | 1.353021e-48 | -8.615850e-47 |
| Msa0769720 | Msa1355510 | 0.836045 | 1.177778e-56 | -8.615850e-47 |
| Msa0769720 | Msa1359610 | 0.807777 | 4.282918e-50 | -8.615850e-47 |
| Msa0769720 | Msa1364080 | 0.865775 | 4.622745e-65 | -8.615850e-47 |
| Msa0769720 | Msa1367530 | 0.818386 | 2.014482e-52 | -8.615850e-47 |
| Msa0769720 | Msa1389760 | 0.850140 | 2.057794e-60 | -8.615850e-47 |
| Msa0769720 | Msa1407880 | 0.805245 | 1.464965e-49 | -8.615850e-47 |
| Msa0769720 | Msa1421210 | 0.810588 | 1.069753e-50 | -8.615850e-47 |
| Msa0769720 | Msa1421900 | 0.801782 | 7.655747e-49 | -8.615850e-47 |
| Msa0769720 | Msa1424580 | 0.816342 | 5.810048e-52 | -8.615850e-47 |
| Msa0769720 | Msa1433410 | 0.829161 | 6.011089e-55 | -8.615850e-47 |
| Msa0769720 | Msa1443620 | 0.832141 | 1.119678e-55 | -8.615850e-47 |
| Msa0769720 | Msa1443640 | 0.802888 | 4.531126e-49 | -8.615850e-47 |
| Msa0133100 | Msa0769720 | 0.822495 | 2.298119e-53 | -8.615850e-47 |
| Msa0136630 | Msa0769720 | 0.827835 | 1.256303e-54 | -8.615850e-47 |
| Msa0137860 | Msa0769720 | 0.828753 | 7.542851e-55 | -8.615850e-47 |
| Msa0137980 | Msa0769720 | 0.845821 | 3.196932e-59 | -8.615850e-47 |
| Msa0138900 | Msa0769720 | 0.853141 | 2.906865e-61 | -8.615850e-47 |
| Msa0147790 | Msa0769720 | 0.823482 | 1.352987e-53 | -8.615850e-47 |
| Msa0151170 | Msa0769720 | 0.831273 | 1.832648e-55 | -8.615850e-47 |
| Msa0151220 | Msa0769720 | 0.844690 | 6.466370e-59 | -8.615850e-47 |
| Msa0152560 | Msa0769720 | 0.814111 | 1.819586e-51 | -8.615850e-47 |
| Msa0162690 | Msa0769720 | 0.813212 | 2.870021e-51 | -8.615850e-47 |
| Msa0176260 | Msa0769720 | 0.819718 | 1.002625e-52 | -8.615850e-47 |
| Msa0179100 | Msa0769720 | 0.812811 | 3.513863e-51 | -8.615850e-47 |
| Msa0183910 | Msa0769720 | 0.831849 | 1.321631e-55 | -8.615850e-47 |
| Msa0187310 | Msa0769720 | 0.853849 | 1.820438e-61 | -8.615850e-47 |
| Msa0196880 | Msa0769720 | 0.837184 | 6.038350e-57 | -8.615850e-47 |
| Msa0198730 | Msa0769720 | 0.800648 | 1.305953e-48 | -8.615850e-47 |
| Msa0213430 | Msa0769720 | 0.816147 | 6.424966e-52 | -8.615850e-47 |
| Msa0223140 | Msa0769720 | 0.820416 | 6.940562e-53 | -8.615850e-47 |
| Msa0224130 | Msa0769720 | 0.877693 | 5.120191e-69 | -8.615850e-47 |
| Msa0364790 | Msa0769720 | 0.871298 | 7.602417e-67 | -8.615850e-47 |
| Msa0365950 | Msa0769720 | 0.836322 | 1.001802e-56 | -8.615850e-47 |
| Msa0366770 | Msa0769720 | 0.817158 | 3.812857e-52 | -8.615850e-47 |
| Msa0380600 | Msa0769720 | 0.830196 | 3.364145e-55 | -8.615850e-47 |
| Msa0412260 | Msa0769720 | 0.835000 | 2.164289e-56 | -8.615850e-47 |
| Msa0413870 | Msa0769720 | 0.829219 | 5.819565e-55 | -8.615850e-47 |
| Msa0430240 | Msa0769720 | 0.831517 | 1.596565e-55 | -8.615850e-47 |
| Msa0456770 | Msa0769720 | 0.859945 | 2.909657e-63 | -8.615850e-47 |
| Msa0463490 | Msa0769720 | 0.804800 | 1.815139e-49 | -8.615850e-47 |
| Msa0472770 | Msa0769720 | 0.810619 | 1.053474e-50 | -8.615850e-47 |
| Msa0240270 | Msa0769720 | 0.802538 | 5.349215e-49 | -8.615850e-47 |
| Msa0259440 | Msa0769720 | 0.868748 | 5.185430e-66 | -8.615850e-47 |
| Msa0259580 | Msa0769720 | 0.861554 | 9.454405e-64 | -8.615850e-47 |
| Msa0260530 | Msa0769720 | 0.808036 | 3.771974e-50 | -8.615850e-47 |
| Msa0264680 | Msa0769720 | 0.835547 | 1.574742e-56 | -8.615850e-47 |
| Msa0265270 | Msa0769720 | 0.877030 | 8.711376e-69 | -8.615850e-47 |
| Msa0276430 | Msa0769720 | 0.883800 | 3.300611e-71 | -8.615850e-47 |
| Msa0279430 | Msa0769720 | 0.807478 | 4.957289e-50 | -8.615850e-47 |
| Msa0302510 | Msa0769720 | 0.815786 | 7.733061e-52 | -8.615850e-47 |
| Msa0302730 | Msa0769720 | 0.841365 | 4.968233e-58 | -8.615850e-47 |
| Msa0302840 | Msa0769720 | 0.805086 | 1.581790e-49 | -8.615850e-47 |
| Msa0305620 | Msa0769720 | 0.869070 | 4.076912e-66 | -8.615850e-47 |
| Msa0316470 | Msa0769720 | 0.874529 | 6.291696e-68 | -8.615850e-47 |
| Msa0319020 | Msa0769720 | 0.809787 | 1.592233e-50 | -8.615850e-47 |
| Msa0339720 | Msa0769720 | 0.816113 | 6.538471e-52 | -8.615850e-47 |
| Msa0358110 | Msa0769720 | 0.802760 | 4.815667e-49 | -8.615850e-47 |
| Msa0484800 | Msa0769720 | 0.809040 | 2.303297e-50 | -8.615850e-47 |
| Msa0488580 | Msa0769720 | 0.815197 | 1.046029e-51 | -8.615850e-47 |
| Msa0500400 | Msa0769720 | 0.825873 | 3.696875e-54 | -8.615850e-47 |
| Msa0524330 | Msa0769720 | 0.818403 | 1.995780e-52 | -8.615850e-47 |
| Msa0524440 | Msa0769720 | 0.827690 | 1.360902e-54 | -8.615850e-47 |
| Msa0534870 | Msa0769720 | 0.839917 | 1.189226e-57 | -8.615850e-47 |
| Msa0542530 | Msa0769720 | 0.820224 | 7.679320e-53 | -8.615850e-47 |
| Msa0550550 | Msa0769720 | 0.809785 | 1.593549e-50 | -8.615850e-47 |
| Msa0579670 | Msa0769720 | 0.838007 | 3.712634e-57 | -8.615850e-47 |
| Msa0584580 | Msa0769720 | 0.818980 | 1.476728e-52 | -8.615850e-47 |
| Msa0584600 | Msa0769720 | 0.815036 | 1.135295e-51 | -8.615850e-47 |
| Msa0588710 | Msa0769720 | 0.812839 | 3.463319e-51 | -8.615850e-47 |
| Msa0590390 | Msa0769720 | 0.807334 | 5.316934e-50 | -8.615850e-47 |
| Msa0592330 | Msa0769720 | 0.800035 | 1.740440e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769720 | MtrunA17_Chr0c01g0489311 | 97.243 | 399 | 8 | 1 | 1 | 396 | 1 | 399 | 0.0 | 803 |
| Msa0769720 | MtrunA17_Chr5g0414371 | 50.882 | 397 | 176 | 9 | 1 | 396 | 1 | 379 | 1.02e-126 | 370 |
| Msa0769720 | MtrunA17_Chr5g0414421 | 50.246 | 406 | 172 | 13 | 1 | 396 | 31 | 416 | 2.32e-126 | 370 |
| Msa0769720 | MtrunA17_Chr5g0414441 | 48.267 | 404 | 184 | 9 | 1 | 396 | 1 | 387 | 1.90e-122 | 359 |
| Msa0769720 | MtrunA17_Chr5g0414461 | 49.749 | 398 | 180 | 10 | 1 | 396 | 1 | 380 | 9.81e-122 | 357 |
| Msa0769720 | MtrunA17_Chr5g0414391 | 48.615 | 397 | 187 | 8 | 1 | 396 | 1 | 381 | 1.53e-119 | 352 |
| Msa0769720 | MtrunA17_Chr6g0456421 | 42.365 | 406 | 216 | 9 | 1 | 396 | 1 | 398 | 4.95e-102 | 308 |
| Msa0769720 | MtrunA17_Chr5g0414451 | 44.231 | 104 | 50 | 3 | 117 | 218 | 2 | 99 | 9.18e-15 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0769720 | AT1G13480.1 | 43.284 | 402 | 207 | 10 | 1 | 396 | 1 | 387 | 1.71e-100 | 304 |
| Msa0769720 | AT1G13520.1 | 44.059 | 404 | 201 | 11 | 1 | 396 | 1 | 387 | 3.67e-99 | 300 |
| Msa0769720 | AT1G13530.1 | 44.802 | 404 | 196 | 11 | 1 | 396 | 1 | 385 | 4.93e-96 | 292 |
| Msa0769720 | AT1G13500.1 | 45.432 | 405 | 193 | 12 | 1 | 396 | 1 | 386 | 3.11e-93 | 285 |
| Msa0769720 | AT1G13490.2 | 43.500 | 400 | 204 | 9 | 1 | 396 | 1 | 382 | 1.64e-92 | 283 |
| Msa0769720 | AT1G13470.1 | 44.776 | 402 | 192 | 14 | 1 | 396 | 1 | 378 | 9.40e-91 | 278 |
| Msa0769720 | AT1G13490.1 | 42.607 | 399 | 190 | 10 | 1 | 396 | 1 | 363 | 6.54e-87 | 268 |
| Msa0769720 | AT1G13540.1 | 40.988 | 405 | 206 | 13 | 1 | 396 | 1 | 381 | 5.46e-86 | 266 |
| Msa0769720 | AT1G61600.1 | 38.695 | 429 | 222 | 11 | 1 | 396 | 1 | 421 | 1.08e-83 | 262 |
| Msa0769720 | AT1G13510.1 | 42.079 | 404 | 202 | 14 | 1 | 396 | 1 | 380 | 1.04e-82 | 258 |
| Msa0769720 | AT1G13550.1 | 39.206 | 403 | 217 | 9 | 1 | 393 | 1 | 385 | 2.71e-77 | 244 |
Find 93 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACCAAAACACCAGAATT+AGG | 0.174233 | 5_2:-38330179 | None:intergenic |
| AGAATTTGAAGGGACTAATA+AGG | 0.248217 | 5_2:+38331802 | Msa0769720:CDS |
| TGATAATGATGATGGTAAAA+AGG | 0.249854 | 5_2:+38331535 | Msa0769720:CDS |
| TTGAAACCAACATCTTGTTT+TGG | 0.266282 | 5_2:+38330215 | Msa0769720:CDS |
| GATAATAAAAGTAGAAGTTT+TGG | 0.283238 | 5_2:-38332157 | None:intergenic |
| CAATCTCTGCAATATCAAAA+TGG | 0.292279 | 5_2:-38332068 | None:intergenic |
| AGGCCCTAATTCTGGTGTTT+TGG | 0.301149 | 5_2:+38330175 | Msa0769720:CDS |
| CCAAGACTTGAATCACTTGA+TGG | 0.321076 | 5_2:-38331296 | None:intergenic |
| GCTATGGTGAAATCGAATTC+TGG | 0.330908 | 5_2:-38331359 | None:intergenic |
| CCACCAGAAGGCCCTAATTC+TGG | 0.339823 | 5_2:+38330167 | Msa0769720:CDS |
| CTGATATCTAAAGGATGAAT+TGG | 0.361943 | 5_2:-38331137 | None:intergenic |
| ACACCAGAATTAGGGCCTTC+TGG | 0.363127 | 5_2:-38330170 | None:intergenic |
| AGATTACACTAGAGCAGAAA+TGG | 0.366742 | 5_2:+38331495 | Msa0769720:CDS |
| CAGGAGAGGGTTGGATGGCT+TGG | 0.376011 | 5_2:+38331743 | Msa0769720:CDS |
| GGGAGAGTACCATGAAGTTA+AGG | 0.382423 | 5_2:+38330241 | Msa0769720:CDS |
| GAACAGTGTGGGTTTGAGTA+TGG | 0.387431 | 5_2:+38331694 | Msa0769720:CDS |
| CCATCAAGTGATTCAAGTCT+TGG | 0.389444 | 5_2:+38331296 | Msa0769720:CDS |
| CCCTTCATGTTTATCAAAGA+AGG | 0.391686 | 5_2:+38331425 | Msa0769720:CDS |
| AAAGTGTTGTTGTGGGAAAA+TGG | 0.398385 | 5_2:+38331396 | Msa0769720:CDS |
| GGAGAGTACCATGAAGTTAA+GGG | 0.402330 | 5_2:+38330242 | Msa0769720:CDS |
| TACTATGTGATACATCTTCA+TGG | 0.407082 | 5_2:+38330392 | Msa0769720:CDS |
| ATCATCAGTTAAGGAGCAAA+TGG | 0.407106 | 5_2:+38331918 | Msa0769720:CDS |
| GTAGAAGCAAAGTTACATTA+AGG | 0.416879 | 5_2:+38331192 | Msa0769720:CDS |
| AGATATCAGTGACAAATATC+AGG | 0.417583 | 5_2:+38331151 | Msa0769720:CDS |
| TTACCAAAACACCAGAATTA+GGG | 0.422217 | 5_2:-38330178 | None:intergenic |
| AAAGAAGTGGTTGTAATTGC+TGG | 0.422244 | 5_2:+38331590 | Msa0769720:CDS |
| TGAGAGAATGAAGTGGGAGC+AGG | 0.430736 | 5_2:+38331724 | Msa0769720:CDS |
| GCTAAATCTGTTGCTGAAGA+TGG | 0.430828 | 5_2:+38331227 | Msa0769720:CDS |
| GGAATTTCAAGTTAAGAAAG+TGG | 0.435170 | 5_2:+38331778 | Msa0769720:CDS |
| TCAAACACCATCATCAGTTA+AGG | 0.444565 | 5_2:+38331909 | Msa0769720:CDS |
| AAGGCAAACCCTTAACTTCA+TGG | 0.449187 | 5_2:-38330250 | None:intergenic |
| AAGAAAGTGGAAGAATTTGA+AGG | 0.451778 | 5_2:+38331791 | Msa0769720:CDS |
| GAATGAAGTGGGAGCAGGAG+AGG | 0.455395 | 5_2:+38331729 | Msa0769720:CDS |
| TTTAATAGTATCAATAATGT+TGG | 0.466830 | 5_2:+38331665 | Msa0769720:CDS |
| AGCAAATGGGAATGAATGTC+TGG | 0.470727 | 5_2:+38331932 | Msa0769720:exon |
| GACAATGGCTGATTAAGAAC+TGG | 0.473764 | 5_2:-38330359 | None:intergenic |
| ATTTGCTCCTTAACTGATGA+TGG | 0.474106 | 5_2:-38331916 | None:intergenic |
| AATGAAGTGGGAGCAGGAGA+GGG | 0.474655 | 5_2:+38331730 | Msa0769720:CDS |
| GAAATCGAATTCTGGTTTCC+CGG | 0.474718 | 5_2:-38331351 | None:intergenic |
| GACTTCTTGTACAAAGAAAG+AGG | 0.484167 | 5_2:-38330122 | None:intergenic |
| GAATTTGAAGGGACTAATAA+GGG | 0.485288 | 5_2:+38331803 | Msa0769720:CDS |
| GAGAGGGTTGGATGGCTTGG+TGG | 0.489813 | 5_2:+38331746 | Msa0769720:CDS |
| TGCTGGGTGGGAAGCTATGA+TGG | 0.490086 | 5_2:+38331607 | Msa0769720:CDS |
| TCAAGTCTTGGAGAAGCATC+AGG | 0.497137 | 5_2:+38331308 | Msa0769720:CDS |
| TCCTTCTTTGATAAACATGA+AGG | 0.498261 | 5_2:-38331426 | None:intergenic |
| TTCTGAACATCTGTTTGCTA+TGG | 0.504829 | 5_2:-38331375 | None:intergenic |
| ATGTATCACATAGTATTGAT+TGG | 0.509699 | 5_2:-38330384 | None:intergenic |
| TTTGTTATAAAGAGATTGGA+TGG | 0.511821 | 5_2:+38331863 | Msa0769720:CDS |
| CATCTTCATGGCAAGAAAAG+AGG | 0.516256 | 5_2:+38330404 | Msa0769720:CDS |
| GTAGATGATTCCCTCCGTGC+CGG | 0.518251 | 5_2:+38331332 | Msa0769720:CDS |
| AAGTGGGAGCAGGAGAGGGT+TGG | 0.525230 | 5_2:+38331734 | Msa0769720:CDS |
| TAGATGATTCCCTCCGTGCC+GGG | 0.526204 | 5_2:+38331333 | Msa0769720:CDS |
| CTGATTAAGAACTGGAATGA+AGG | 0.530740 | 5_2:-38330351 | None:intergenic |
| TTCTGGTTTCCCGGCACGGA+GGG | 0.530934 | 5_2:-38331342 | None:intergenic |
| GAATTAGGGCCTTCTGGTGG+AGG | 0.531123 | 5_2:-38330164 | None:intergenic |
| CGAATTCTGGTTTCCCGGCA+CGG | 0.531178 | 5_2:-38331346 | None:intergenic |
| ATGGCTTGGTGGGAAAGAAA+AGG | 0.534199 | 5_2:+38331757 | Msa0769720:CDS |
| AGCTATGATGGATAATAAGA+TGG | 0.539308 | 5_2:+38331619 | Msa0769720:CDS |
| TCATCAGTTAAGGAGCAAAT+GGG | 0.542302 | 5_2:+38331919 | Msa0769720:CDS |
| TATTTGTCACTGATATCTAA+AGG | 0.544278 | 5_2:-38331146 | None:intergenic |
| AGAGGGTTGGATGGCTTGGT+GGG | 0.548797 | 5_2:+38331747 | Msa0769720:CDS |
| CCCAACCCAAAACAAGATGT+TGG | 0.552661 | 5_2:-38330221 | None:intergenic |
| GATTACACTAGAGCAGAAAT+GGG | 0.553713 | 5_2:+38331496 | Msa0769720:CDS |
| TTTGTACAAGAAGTCTGAAG+AGG | 0.555051 | 5_2:+38330130 | Msa0769720:CDS |
| GGGAGCAGGAGAGGGTTGGA+TGG | 0.555243 | 5_2:+38331738 | Msa0769720:CDS |
| GTTGGAGAAAAGAACAGTGT+GGG | 0.558075 | 5_2:+38331683 | Msa0769720:CDS |
| CTGATCTATAAAACAACTCA+AGG | 0.565365 | 5_2:-38330289 | None:intergenic |
| ATCTTCATGGCAAGAAAAGA+GGG | 0.569344 | 5_2:+38330405 | Msa0769720:CDS |
| AGTGGTTGTAATTGCTGGGT+GGG | 0.569655 | 5_2:+38331595 | Msa0769720:CDS |
| TTGAAGGGACTAATAAGGGA+TGG | 0.569939 | 5_2:+38331807 | Msa0769720:CDS |
| TGTTCAGAAAGTGTTGTTGT+GGG | 0.572278 | 5_2:+38331389 | Msa0769720:CDS |
| AGCAAAGTTACATTAAGGAG+TGG | 0.577098 | 5_2:+38331197 | Msa0769720:CDS |
| AAAATTTGGATGTTATGTGT+TGG | 0.578946 | 5_2:+38331832 | Msa0769720:CDS |
| AGAAAGTGGAAGAATTTGAA+GGG | 0.580351 | 5_2:+38331792 | Msa0769720:CDS |
| CCTTCTTTGATAAACATGAA+GGG | 0.590946 | 5_2:-38331425 | None:intergenic |
| CTGAAGATGGATACCCTCCA+AGG | 0.601083 | 5_2:+38331240 | Msa0769720:CDS |
| TATCACATAGTATTGATTGG+AGG | 0.603064 | 5_2:-38330381 | None:intergenic |
| CAATAGTTGAGAGAATGAAG+TGG | 0.612002 | 5_2:+38331717 | Msa0769720:CDS |
| ATGTTCAGAAAGTGTTGTTG+TGG | 0.614049 | 5_2:+38331388 | Msa0769720:CDS |
| GGAAGCATACAATAACTCAA+AGG | 0.617419 | 5_2:+38331067 | Msa0769720:CDS |
| CTCTCATTACCTCCACCAGA+AGG | 0.619265 | 5_2:+38330155 | Msa0769720:CDS |
| AATAGTTGAGAGAATGAAGT+GGG | 0.629735 | 5_2:+38331718 | Msa0769720:CDS |
| TGTTGGAGAAAAGAACAGTG+TGG | 0.630693 | 5_2:+38331682 | Msa0769720:CDS |
| AAGAAGTGGTTGTAATTGCT+GGG | 0.631620 | 5_2:+38331591 | Msa0769720:CDS |
| TATAGAATATGTATGTGACT+AGG | 0.634027 | 5_2:+38330099 | None:intergenic |
| TAACTCAAAGGAGGAAGACG+TGG | 0.642483 | 5_2:+38331079 | Msa0769720:CDS |
| AGCATACAATAACTCAAAGG+AGG | 0.645051 | 5_2:+38331070 | Msa0769720:CDS |
| TAGTATTGATTGGAGGACAA+TGG | 0.649023 | 5_2:-38330374 | None:intergenic |
| CCAGAATTAGGGCCTTCTGG+TGG | 0.656141 | 5_2:-38330167 | None:intergenic |
| AATGTAACTTTGCTTCTACG+AGG | 0.675300 | 5_2:-38331188 | None:intergenic |
| AAGTGGTTGTAATTGCTGGG+TGG | 0.699538 | 5_2:+38331594 | Msa0769720:CDS |
| ATTCTGGTTTCCCGGCACGG+AGG | 0.710825 | 5_2:-38331343 | None:intergenic |
| ATGATGGTGTTTGAAAGCAT+AGG | 0.759923 | 5_2:-38331900 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATAATTTCTTAACT+TGG | + | chr5_2:38330446-38330465 | Msa0769720:intron | 10.0% |
| !! | TCATGTAAAAAATTAAAAAT+TGG | - | chr5_2:38330985-38331004 | None:intergenic | 10.0% |
| !! | AAAATAATAATTTCTTAACT+TGG | + | chr5_2:38330446-38330465 | Msa0769720:intron | 10.0% |
| !! | TCATGTAAAAAATTAAAAAT+TGG | - | chr5_2:38330985-38331004 | None:intergenic | 10.0% |
| !! | TTTAATAGTATCAATAATGT+TGG | + | chr5_2:38331665-38331684 | Msa0769720:CDS | 15.0% |
| !! | TTTAATAGTATCAATAATGT+TGG | + | chr5_2:38331665-38331684 | Msa0769720:CDS | 15.0% |
| !!! | GACATTAATGTATTTTGATA+AGG | + | chr5_2:38330587-38330606 | Msa0769720:intron | 20.0% |
| !!! | TAAATTTTTCGTCTGTTATT+TGG | - | chr5_2:38330657-38330676 | None:intergenic | 20.0% |
| !!! | AATTAAAAATTGGTTCAACA+CGG | - | chr5_2:38330975-38330994 | None:intergenic | 20.0% |
| !! | AGTATTATACTGATGTAATT+TGG | + | chr5_2:38331030-38331049 | Msa0769720:intron | 20.0% |
| !!! | GATAATAAAAGTAGAAGTTT+TGG | - | chr5_2:38332160-38332179 | None:intergenic | 20.0% |
| !!! | GACATTAATGTATTTTGATA+AGG | + | chr5_2:38330587-38330606 | Msa0769720:intron | 20.0% |
| !!! | TAAATTTTTCGTCTGTTATT+TGG | - | chr5_2:38330657-38330676 | None:intergenic | 20.0% |
| !!! | AATTAAAAATTGGTTCAACA+CGG | - | chr5_2:38330975-38330994 | None:intergenic | 20.0% |
| !! | AGTATTATACTGATGTAATT+TGG | + | chr5_2:38331030-38331049 | Msa0769720:intron | 20.0% |
| !!! | GATAATAAAAGTAGAAGTTT+TGG | - | chr5_2:38332160-38332179 | None:intergenic | 20.0% |
| !!! | ATGTATCACATAGTATTGAT+TGG | - | chr5_2:38330387-38330406 | None:intergenic | 25.0% |
| !!! | TAATTTGGTTTTTCTTCTGT+AGG | + | chr5_2:38331045-38331064 | Msa0769720:intron | 25.0% |
| !!! | AATTTGGTTTTTCTTCTGTA+GGG | + | chr5_2:38331046-38331065 | Msa0769720:intron | 25.0% |
| ! | TATTTGTCACTGATATCTAA+AGG | - | chr5_2:38331149-38331168 | None:intergenic | 25.0% |
| !!! | TTTTCATGTGATAATGATGA+TGG | + | chr5_2:38331527-38331546 | Msa0769720:CDS | 25.0% |
| !!! | TGATAATGATGATGGTAAAA+AGG | + | chr5_2:38331535-38331554 | Msa0769720:CDS | 25.0% |
| !!! | GATAATGATGATGGTAAAAA+GGG | + | chr5_2:38331536-38331555 | Msa0769720:CDS | 25.0% |
| ! | AATAAGGGATGGAAAAAATT+TGG | + | chr5_2:38331818-38331837 | Msa0769720:CDS | 25.0% |
| ! | AAAATTTGGATGTTATGTGT+TGG | + | chr5_2:38331832-38331851 | Msa0769720:CDS | 25.0% |
| !!! | GACTTTTGTTATAAAGAGAT+TGG | + | chr5_2:38331859-38331878 | Msa0769720:CDS | 25.0% |
| !! | TTTGTTATAAAGAGATTGGA+TGG | + | chr5_2:38331863-38331882 | Msa0769720:CDS | 25.0% |
| !!! | ATCCATTTTTTTCATTCTCA+TGG | - | chr5_2:38331959-38331978 | None:intergenic | 25.0% |
| ! | TGAGAATGAAAAAAATGGAT+AGG | + | chr5_2:38331959-38331978 | Msa0769720:three_prime_UTR | 25.0% |
| !!! | ATGTATCACATAGTATTGAT+TGG | - | chr5_2:38330387-38330406 | None:intergenic | 25.0% |
| !!! | TAATTTGGTTTTTCTTCTGT+AGG | + | chr5_2:38331045-38331064 | Msa0769720:intron | 25.0% |
| !!! | AATTTGGTTTTTCTTCTGTA+GGG | + | chr5_2:38331046-38331065 | Msa0769720:intron | 25.0% |
| ! | TATTTGTCACTGATATCTAA+AGG | - | chr5_2:38331149-38331168 | None:intergenic | 25.0% |
| !!! | TTTTCATGTGATAATGATGA+TGG | + | chr5_2:38331527-38331546 | Msa0769720:CDS | 25.0% |
| !!! | TGATAATGATGATGGTAAAA+AGG | + | chr5_2:38331535-38331554 | Msa0769720:CDS | 25.0% |
| !!! | GATAATGATGATGGTAAAAA+GGG | + | chr5_2:38331536-38331555 | Msa0769720:CDS | 25.0% |
| ! | AATAAGGGATGGAAAAAATT+TGG | + | chr5_2:38331818-38331837 | Msa0769720:CDS | 25.0% |
| ! | AAAATTTGGATGTTATGTGT+TGG | + | chr5_2:38331832-38331851 | Msa0769720:CDS | 25.0% |
| !!! | GACTTTTGTTATAAAGAGAT+TGG | + | chr5_2:38331859-38331878 | Msa0769720:CDS | 25.0% |
| !! | TTTGTTATAAAGAGATTGGA+TGG | + | chr5_2:38331863-38331882 | Msa0769720:CDS | 25.0% |
| !!! | ATCCATTTTTTTCATTCTCA+TGG | - | chr5_2:38331959-38331978 | None:intergenic | 25.0% |
| ! | TGAGAATGAAAAAAATGGAT+AGG | + | chr5_2:38331959-38331978 | Msa0769720:three_prime_UTR | 25.0% |
| TTACCAAAACACCAGAATTA+GGG | - | chr5_2:38330181-38330200 | None:intergenic | 30.0% | |
| ATTACCAAAACACCAGAATT+AGG | - | chr5_2:38330182-38330201 | None:intergenic | 30.0% | |
| !! | TTGAAACCAACATCTTGTTT+TGG | + | chr5_2:38330215-38330234 | Msa0769720:CDS | 30.0% |
| !!! | TGAAACCAACATCTTGTTTT+GGG | + | chr5_2:38330216-38330235 | Msa0769720:CDS | 30.0% |
| CTGATCTATAAAACAACTCA+AGG | - | chr5_2:38330292-38330311 | None:intergenic | 30.0% | |
| !! | CTTGAGTTGTTTTATAGATC+AGG | + | chr5_2:38330290-38330309 | Msa0769720:intron | 30.0% |
| !! | TATCACATAGTATTGATTGG+AGG | - | chr5_2:38330384-38330403 | None:intergenic | 30.0% |
| TACTATGTGATACATCTTCA+TGG | + | chr5_2:38330392-38330411 | Msa0769720:CDS | 30.0% | |
| GGTACTATATAACTGACATT+TGG | - | chr5_2:38330504-38330523 | None:intergenic | 30.0% | |
| ATGTCAGTTATATAGTACCA+CGG | + | chr5_2:38330505-38330524 | Msa0769720:intron | 30.0% | |
| ! | AAATAACGGGGAATATACTT+AGG | + | chr5_2:38330538-38330557 | Msa0769720:intron | 30.0% |
| ACATTGAATTTCGATGACTT+TGG | + | chr5_2:38330563-38330582 | Msa0769720:intron | 30.0% | |
| TTTGCTAGTATTGTAGCATA+AGG | + | chr5_2:38330753-38330772 | Msa0769720:intron | 30.0% | |
| TTGCTAGTATTGTAGCATAA+GGG | + | chr5_2:38330754-38330773 | Msa0769720:intron | 30.0% | |
| TGTTAGATTTGAATACAGGT+TGG | + | chr5_2:38330889-38330908 | Msa0769720:intron | 30.0% | |
| GTTAGATTTGAATACAGGTT+GGG | + | chr5_2:38330890-38330909 | Msa0769720:intron | 30.0% | |
| CTGATATCTAAAGGATGAAT+TGG | - | chr5_2:38331140-38331159 | None:intergenic | 30.0% | |
| AGATATCAGTGACAAATATC+AGG | + | chr5_2:38331151-38331170 | Msa0769720:CDS | 30.0% | |
| GTAGAAGCAAAGTTACATTA+AGG | + | chr5_2:38331192-38331211 | Msa0769720:CDS | 30.0% | |
| TTCTACTTAAAAACCTTGGA+GGG | - | chr5_2:38331256-38331275 | None:intergenic | 30.0% | |
| CCTTCTTTGATAAACATGAA+GGG | - | chr5_2:38331428-38331447 | None:intergenic | 30.0% | |
| TCCTTCTTTGATAAACATGA+AGG | - | chr5_2:38331429-38331448 | None:intergenic | 30.0% | |
| !! | AGCTATGATGGATAATAAGA+TGG | + | chr5_2:38331619-38331638 | Msa0769720:CDS | 30.0% |
| !!! | ATGTAGCTGAAAGTTTTTTG+TGG | + | chr5_2:38331642-38331661 | Msa0769720:CDS | 30.0% |
| AATAGTTGAGAGAATGAAGT+GGG | + | chr5_2:38331718-38331737 | Msa0769720:CDS | 30.0% | |
| !! | GGAATTTCAAGTTAAGAAAG+TGG | + | chr5_2:38331778-38331797 | Msa0769720:CDS | 30.0% |
| AAGAAAGTGGAAGAATTTGA+AGG | + | chr5_2:38331791-38331810 | Msa0769720:CDS | 30.0% | |
| AGAAAGTGGAAGAATTTGAA+GGG | + | chr5_2:38331792-38331811 | Msa0769720:CDS | 30.0% | |
| AGAATTTGAAGGGACTAATA+AGG | + | chr5_2:38331802-38331821 | Msa0769720:CDS | 30.0% | |
| GAATTTGAAGGGACTAATAA+GGG | + | chr5_2:38331803-38331822 | Msa0769720:CDS | 30.0% | |
| GTCCATGAGAATGAAAAAAA+TGG | + | chr5_2:38331954-38331973 | Msa0769720:three_prime_UTR | 30.0% | |
| CAATCTCTGCAATATCAAAA+TGG | - | chr5_2:38332071-38332090 | None:intergenic | 30.0% | |
| TTACCAAAACACCAGAATTA+GGG | - | chr5_2:38330181-38330200 | None:intergenic | 30.0% | |
| ATTACCAAAACACCAGAATT+AGG | - | chr5_2:38330182-38330201 | None:intergenic | 30.0% | |
| !! | TTGAAACCAACATCTTGTTT+TGG | + | chr5_2:38330215-38330234 | Msa0769720:CDS | 30.0% |
| !!! | TGAAACCAACATCTTGTTTT+GGG | + | chr5_2:38330216-38330235 | Msa0769720:CDS | 30.0% |
| CTGATCTATAAAACAACTCA+AGG | - | chr5_2:38330292-38330311 | None:intergenic | 30.0% | |
| !! | CTTGAGTTGTTTTATAGATC+AGG | + | chr5_2:38330290-38330309 | Msa0769720:intron | 30.0% |
| !! | TATCACATAGTATTGATTGG+AGG | - | chr5_2:38330384-38330403 | None:intergenic | 30.0% |
| TACTATGTGATACATCTTCA+TGG | + | chr5_2:38330392-38330411 | Msa0769720:CDS | 30.0% | |
| GGTACTATATAACTGACATT+TGG | - | chr5_2:38330504-38330523 | None:intergenic | 30.0% | |
| ATGTCAGTTATATAGTACCA+CGG | + | chr5_2:38330505-38330524 | Msa0769720:intron | 30.0% | |
| ! | AAATAACGGGGAATATACTT+AGG | + | chr5_2:38330538-38330557 | Msa0769720:intron | 30.0% |
| ACATTGAATTTCGATGACTT+TGG | + | chr5_2:38330563-38330582 | Msa0769720:intron | 30.0% | |
| TTTGCTAGTATTGTAGCATA+AGG | + | chr5_2:38330753-38330772 | Msa0769720:intron | 30.0% | |
| TTGCTAGTATTGTAGCATAA+GGG | + | chr5_2:38330754-38330773 | Msa0769720:intron | 30.0% | |
| TGTTAGATTTGAATACAGGT+TGG | + | chr5_2:38330889-38330908 | Msa0769720:intron | 30.0% | |
| GTTAGATTTGAATACAGGTT+GGG | + | chr5_2:38330890-38330909 | Msa0769720:intron | 30.0% | |
| CTGATATCTAAAGGATGAAT+TGG | - | chr5_2:38331140-38331159 | None:intergenic | 30.0% | |
| AGATATCAGTGACAAATATC+AGG | + | chr5_2:38331151-38331170 | Msa0769720:CDS | 30.0% | |
| GTAGAAGCAAAGTTACATTA+AGG | + | chr5_2:38331192-38331211 | Msa0769720:CDS | 30.0% | |
| TTCTACTTAAAAACCTTGGA+GGG | - | chr5_2:38331256-38331275 | None:intergenic | 30.0% | |
| CCTTCTTTGATAAACATGAA+GGG | - | chr5_2:38331428-38331447 | None:intergenic | 30.0% | |
| TCCTTCTTTGATAAACATGA+AGG | - | chr5_2:38331429-38331448 | None:intergenic | 30.0% | |
| !! | AGCTATGATGGATAATAAGA+TGG | + | chr5_2:38331619-38331638 | Msa0769720:CDS | 30.0% |
| !!! | ATGTAGCTGAAAGTTTTTTG+TGG | + | chr5_2:38331642-38331661 | Msa0769720:CDS | 30.0% |
| AATAGTTGAGAGAATGAAGT+GGG | + | chr5_2:38331718-38331737 | Msa0769720:CDS | 30.0% | |
| !! | GGAATTTCAAGTTAAGAAAG+TGG | + | chr5_2:38331778-38331797 | Msa0769720:CDS | 30.0% |
| AAGAAAGTGGAAGAATTTGA+AGG | + | chr5_2:38331791-38331810 | Msa0769720:CDS | 30.0% | |
| AGAAAGTGGAAGAATTTGAA+GGG | + | chr5_2:38331792-38331811 | Msa0769720:CDS | 30.0% | |
| AGAATTTGAAGGGACTAATA+AGG | + | chr5_2:38331802-38331821 | Msa0769720:CDS | 30.0% | |
| GAATTTGAAGGGACTAATAA+GGG | + | chr5_2:38331803-38331822 | Msa0769720:CDS | 30.0% | |
| GTCCATGAGAATGAAAAAAA+TGG | + | chr5_2:38331954-38331973 | Msa0769720:three_prime_UTR | 30.0% | |
| CAATCTCTGCAATATCAAAA+TGG | - | chr5_2:38332071-38332090 | None:intergenic | 30.0% | |
| GACTTCTTGTACAAAGAAAG+AGG | - | chr5_2:38330125-38330144 | None:intergenic | 35.0% | |
| TTTGTACAAGAAGTCTGAAG+AGG | + | chr5_2:38330130-38330149 | Msa0769720:CDS | 35.0% | |
| !! | ACTCAAGGTTCATGTTTTGA+GGG | - | chr5_2:38330277-38330296 | None:intergenic | 35.0% |
| ! | AACTCAAGGTTCATGTTTTG+AGG | - | chr5_2:38330278-38330297 | None:intergenic | 35.0% |
| CTGATTAAGAACTGGAATGA+AGG | - | chr5_2:38330354-38330373 | None:intergenic | 35.0% | |
| !! | TAGTATTGATTGGAGGACAA+TGG | - | chr5_2:38330377-38330396 | None:intergenic | 35.0% |
| ATCTTCATGGCAAGAAAAGA+GGG | + | chr5_2:38330405-38330424 | Msa0769720:CDS | 35.0% | |
| ! | ACTTCAGTGACTTTGAGTTT+CGG | - | chr5_2:38330629-38330648 | None:intergenic | 35.0% |
| GAGCTGTTAGATTTGAATAC+AGG | + | chr5_2:38330885-38330904 | Msa0769720:intron | 35.0% | |
| ! | GGAAGCATACAATAACTCAA+AGG | + | chr5_2:38331067-38331086 | Msa0769720:CDS | 35.0% |
| AGCATACAATAACTCAAAGG+AGG | + | chr5_2:38331070-38331089 | Msa0769720:CDS | 35.0% | |
| AATGTAACTTTGCTTCTACG+AGG | - | chr5_2:38331191-38331210 | None:intergenic | 35.0% | |
| AGCAAAGTTACATTAAGGAG+TGG | + | chr5_2:38331197-38331216 | Msa0769720:CDS | 35.0% | |
| CTTCTACTTAAAAACCTTGG+AGG | - | chr5_2:38331257-38331276 | None:intergenic | 35.0% | |
| !!! | CTCCAAGGTTTTTAAGTAGA+AGG | + | chr5_2:38331255-38331274 | Msa0769720:CDS | 35.0% |
| CACCTTCTACTTAAAAACCT+TGG | - | chr5_2:38331260-38331279 | None:intergenic | 35.0% | |
| !!! | CAAGGTTTTTAAGTAGAAGG+TGG | + | chr5_2:38331258-38331277 | Msa0769720:CDS | 35.0% |
| ! | TTCTGAACATCTGTTTGCTA+TGG | - | chr5_2:38331378-38331397 | None:intergenic | 35.0% |
| !! | ATGTTCAGAAAGTGTTGTTG+TGG | + | chr5_2:38331388-38331407 | Msa0769720:CDS | 35.0% |
| !! | TGTTCAGAAAGTGTTGTTGT+GGG | + | chr5_2:38331389-38331408 | Msa0769720:CDS | 35.0% |
| !! | AAAGTGTTGTTGTGGGAAAA+TGG | + | chr5_2:38331396-38331415 | Msa0769720:CDS | 35.0% |
| CCCTTCATGTTTATCAAAGA+AGG | + | chr5_2:38331425-38331444 | Msa0769720:CDS | 35.0% | |
| AGATTACACTAGAGCAGAAA+TGG | + | chr5_2:38331495-38331514 | Msa0769720:CDS | 35.0% | |
| GATTACACTAGAGCAGAAAT+GGG | + | chr5_2:38331496-38331515 | Msa0769720:CDS | 35.0% | |
| TGCTGTTGTTCAAAAAGAAG+TGG | + | chr5_2:38331577-38331596 | Msa0769720:CDS | 35.0% | |
| AAAGAAGTGGTTGTAATTGC+TGG | + | chr5_2:38331590-38331609 | Msa0769720:CDS | 35.0% | |
| AAGAAGTGGTTGTAATTGCT+GGG | + | chr5_2:38331591-38331610 | Msa0769720:CDS | 35.0% | |
| CAATAGTTGAGAGAATGAAG+TGG | + | chr5_2:38331717-38331736 | Msa0769720:CDS | 35.0% | |
| ! | ATGATGGTGTTTGAAAGCAT+AGG | - | chr5_2:38331903-38331922 | None:intergenic | 35.0% |
| TCAAACACCATCATCAGTTA+AGG | + | chr5_2:38331909-38331928 | Msa0769720:CDS | 35.0% | |
| ATTTGCTCCTTAACTGATGA+TGG | - | chr5_2:38331919-38331938 | None:intergenic | 35.0% | |
| ATCATCAGTTAAGGAGCAAA+TGG | + | chr5_2:38331918-38331937 | Msa0769720:CDS | 35.0% | |
| TCATCAGTTAAGGAGCAAAT+GGG | + | chr5_2:38331919-38331938 | Msa0769720:CDS | 35.0% | |
| !!! | GTAGAAGTTTTGGTTTGCAT+GGG | - | chr5_2:38332150-38332169 | None:intergenic | 35.0% |
| !!! | AGTAGAAGTTTTGGTTTGCA+TGG | - | chr5_2:38332151-38332170 | None:intergenic | 35.0% |
| GACTTCTTGTACAAAGAAAG+AGG | - | chr5_2:38330125-38330144 | None:intergenic | 35.0% | |
| TTTGTACAAGAAGTCTGAAG+AGG | + | chr5_2:38330130-38330149 | Msa0769720:CDS | 35.0% | |
| !! | ACTCAAGGTTCATGTTTTGA+GGG | - | chr5_2:38330277-38330296 | None:intergenic | 35.0% |
| ! | AACTCAAGGTTCATGTTTTG+AGG | - | chr5_2:38330278-38330297 | None:intergenic | 35.0% |
| CTGATTAAGAACTGGAATGA+AGG | - | chr5_2:38330354-38330373 | None:intergenic | 35.0% | |
| !! | TAGTATTGATTGGAGGACAA+TGG | - | chr5_2:38330377-38330396 | None:intergenic | 35.0% |
| ATCTTCATGGCAAGAAAAGA+GGG | + | chr5_2:38330405-38330424 | Msa0769720:CDS | 35.0% | |
| ! | ACTTCAGTGACTTTGAGTTT+CGG | - | chr5_2:38330629-38330648 | None:intergenic | 35.0% |
| GAGCTGTTAGATTTGAATAC+AGG | + | chr5_2:38330885-38330904 | Msa0769720:intron | 35.0% | |
| ! | GGAAGCATACAATAACTCAA+AGG | + | chr5_2:38331067-38331086 | Msa0769720:CDS | 35.0% |
| AGCATACAATAACTCAAAGG+AGG | + | chr5_2:38331070-38331089 | Msa0769720:CDS | 35.0% | |
| AATGTAACTTTGCTTCTACG+AGG | - | chr5_2:38331191-38331210 | None:intergenic | 35.0% | |
| AGCAAAGTTACATTAAGGAG+TGG | + | chr5_2:38331197-38331216 | Msa0769720:CDS | 35.0% | |
| CTTCTACTTAAAAACCTTGG+AGG | - | chr5_2:38331257-38331276 | None:intergenic | 35.0% | |
| !!! | CTCCAAGGTTTTTAAGTAGA+AGG | + | chr5_2:38331255-38331274 | Msa0769720:CDS | 35.0% |
| CACCTTCTACTTAAAAACCT+TGG | - | chr5_2:38331260-38331279 | None:intergenic | 35.0% | |
| !!! | CAAGGTTTTTAAGTAGAAGG+TGG | + | chr5_2:38331258-38331277 | Msa0769720:CDS | 35.0% |
| ! | TTCTGAACATCTGTTTGCTA+TGG | - | chr5_2:38331378-38331397 | None:intergenic | 35.0% |
| !! | ATGTTCAGAAAGTGTTGTTG+TGG | + | chr5_2:38331388-38331407 | Msa0769720:CDS | 35.0% |
| !! | TGTTCAGAAAGTGTTGTTGT+GGG | + | chr5_2:38331389-38331408 | Msa0769720:CDS | 35.0% |
| !! | AAAGTGTTGTTGTGGGAAAA+TGG | + | chr5_2:38331396-38331415 | Msa0769720:CDS | 35.0% |
| CCCTTCATGTTTATCAAAGA+AGG | + | chr5_2:38331425-38331444 | Msa0769720:CDS | 35.0% | |
| AGATTACACTAGAGCAGAAA+TGG | + | chr5_2:38331495-38331514 | Msa0769720:CDS | 35.0% | |
| GATTACACTAGAGCAGAAAT+GGG | + | chr5_2:38331496-38331515 | Msa0769720:CDS | 35.0% | |
| TGCTGTTGTTCAAAAAGAAG+TGG | + | chr5_2:38331577-38331596 | Msa0769720:CDS | 35.0% | |
| AAAGAAGTGGTTGTAATTGC+TGG | + | chr5_2:38331590-38331609 | Msa0769720:CDS | 35.0% | |
| AAGAAGTGGTTGTAATTGCT+GGG | + | chr5_2:38331591-38331610 | Msa0769720:CDS | 35.0% | |
| CAATAGTTGAGAGAATGAAG+TGG | + | chr5_2:38331717-38331736 | Msa0769720:CDS | 35.0% | |
| ! | ATGATGGTGTTTGAAAGCAT+AGG | - | chr5_2:38331903-38331922 | None:intergenic | 35.0% |
| TCAAACACCATCATCAGTTA+AGG | + | chr5_2:38331909-38331928 | Msa0769720:CDS | 35.0% | |
| ATTTGCTCCTTAACTGATGA+TGG | - | chr5_2:38331919-38331938 | None:intergenic | 35.0% | |
| ATCATCAGTTAAGGAGCAAA+TGG | + | chr5_2:38331918-38331937 | Msa0769720:CDS | 35.0% | |
| TCATCAGTTAAGGAGCAAAT+GGG | + | chr5_2:38331919-38331938 | Msa0769720:CDS | 35.0% | |
| !!! | GTAGAAGTTTTGGTTTGCAT+GGG | - | chr5_2:38332150-38332169 | None:intergenic | 35.0% |
| !!! | AGTAGAAGTTTTGGTTTGCA+TGG | - | chr5_2:38332151-38332170 | None:intergenic | 35.0% |
| !!! | ACCAACATCTTGTTTTGGGT+TGG | + | chr5_2:38330220-38330239 | Msa0769720:CDS | 40.0% |
| !!! | CCAACATCTTGTTTTGGGTT+GGG | + | chr5_2:38330221-38330240 | Msa0769720:CDS | 40.0% |
| !! | GGAGAGTACCATGAAGTTAA+GGG | + | chr5_2:38330242-38330261 | Msa0769720:CDS | 40.0% |
| AAGGCAAACCCTTAACTTCA+TGG | - | chr5_2:38330253-38330272 | None:intergenic | 40.0% | |
| !!! | AGGTTCATGTTTTGAGGGAA+AGG | - | chr5_2:38330272-38330291 | None:intergenic | 40.0% |
| GACAATGGCTGATTAAGAAC+TGG | - | chr5_2:38330362-38330381 | None:intergenic | 40.0% | |
| CATCTTCATGGCAAGAAAAG+AGG | + | chr5_2:38330404-38330423 | Msa0769720:CDS | 40.0% | |
| TTATATAGTACCACGGCGTA+AGG | + | chr5_2:38330512-38330531 | Msa0769720:intron | 40.0% | |
| ACGGCGTAAGGTTGAAATAA+CGG | + | chr5_2:38330524-38330543 | Msa0769720:intron | 40.0% | |
| GAAACTCAAAGTCACTGAAG+TGG | + | chr5_2:38330628-38330647 | Msa0769720:intron | 40.0% | |
| TTAAACTCGATCGTCAAAGC+AGG | + | chr5_2:38330674-38330693 | Msa0769720:intron | 40.0% | |
| AACTCATGCACATGTACTCA+TGG | - | chr5_2:38330826-38330845 | None:intergenic | 40.0% | |
| TATCTCTATTACCCTGAACG+TGG | - | chr5_2:38330951-38330970 | None:intergenic | 40.0% | |
| GCTAAATCTGTTGCTGAAGA+TGG | + | chr5_2:38331227-38331246 | Msa0769720:CDS | 40.0% | |
| CCAAGACTTGAATCACTTGA+TGG | - | chr5_2:38331299-38331318 | None:intergenic | 40.0% | |
| CCATCAAGTGATTCAAGTCT+TGG | + | chr5_2:38331296-38331315 | Msa0769720:CDS | 40.0% | |
| !! | GAAATCGAATTCTGGTTTCC+CGG | - | chr5_2:38331354-38331373 | None:intergenic | 40.0% |
| GCTATGGTGAAATCGAATTC+TGG | - | chr5_2:38331362-38331381 | None:intergenic | 40.0% | |
| TGTTGGAGAAAAGAACAGTG+TGG | + | chr5_2:38331682-38331701 | Msa0769720:CDS | 40.0% | |
| GTTGGAGAAAAGAACAGTGT+GGG | + | chr5_2:38331683-38331702 | Msa0769720:CDS | 40.0% | |
| TTGAAGGGACTAATAAGGGA+TGG | + | chr5_2:38331807-38331826 | Msa0769720:CDS | 40.0% | |
| AGCAAATGGGAATGAATGTC+TGG | + | chr5_2:38331932-38331951 | Msa0769720:exon | 40.0% | |
| !!! | ACCAACATCTTGTTTTGGGT+TGG | + | chr5_2:38330220-38330239 | Msa0769720:CDS | 40.0% |
| !!! | CCAACATCTTGTTTTGGGTT+GGG | + | chr5_2:38330221-38330240 | Msa0769720:CDS | 40.0% |
| !! | GGAGAGTACCATGAAGTTAA+GGG | + | chr5_2:38330242-38330261 | Msa0769720:CDS | 40.0% |
| AAGGCAAACCCTTAACTTCA+TGG | - | chr5_2:38330253-38330272 | None:intergenic | 40.0% | |
| !!! | AGGTTCATGTTTTGAGGGAA+AGG | - | chr5_2:38330272-38330291 | None:intergenic | 40.0% |
| GACAATGGCTGATTAAGAAC+TGG | - | chr5_2:38330362-38330381 | None:intergenic | 40.0% | |
| CATCTTCATGGCAAGAAAAG+AGG | + | chr5_2:38330404-38330423 | Msa0769720:CDS | 40.0% | |
| TTATATAGTACCACGGCGTA+AGG | + | chr5_2:38330512-38330531 | Msa0769720:intron | 40.0% | |
| ACGGCGTAAGGTTGAAATAA+CGG | + | chr5_2:38330524-38330543 | Msa0769720:intron | 40.0% | |
| GAAACTCAAAGTCACTGAAG+TGG | + | chr5_2:38330628-38330647 | Msa0769720:intron | 40.0% | |
| TTAAACTCGATCGTCAAAGC+AGG | + | chr5_2:38330674-38330693 | Msa0769720:intron | 40.0% | |
| AACTCATGCACATGTACTCA+TGG | - | chr5_2:38330826-38330845 | None:intergenic | 40.0% | |
| TATCTCTATTACCCTGAACG+TGG | - | chr5_2:38330951-38330970 | None:intergenic | 40.0% | |
| GCTAAATCTGTTGCTGAAGA+TGG | + | chr5_2:38331227-38331246 | Msa0769720:CDS | 40.0% | |
| CCAAGACTTGAATCACTTGA+TGG | - | chr5_2:38331299-38331318 | None:intergenic | 40.0% | |
| CCATCAAGTGATTCAAGTCT+TGG | + | chr5_2:38331296-38331315 | Msa0769720:CDS | 40.0% | |
| !! | GAAATCGAATTCTGGTTTCC+CGG | - | chr5_2:38331354-38331373 | None:intergenic | 40.0% |
| GCTATGGTGAAATCGAATTC+TGG | - | chr5_2:38331362-38331381 | None:intergenic | 40.0% | |
| TGTTGGAGAAAAGAACAGTG+TGG | + | chr5_2:38331682-38331701 | Msa0769720:CDS | 40.0% | |
| GTTGGAGAAAAGAACAGTGT+GGG | + | chr5_2:38331683-38331702 | Msa0769720:CDS | 40.0% | |
| TTGAAGGGACTAATAAGGGA+TGG | + | chr5_2:38331807-38331826 | Msa0769720:CDS | 40.0% | |
| AGCAAATGGGAATGAATGTC+TGG | + | chr5_2:38331932-38331951 | Msa0769720:exon | 40.0% | |
| ! | AGGCCCTAATTCTGGTGTTT+TGG | + | chr5_2:38330175-38330194 | Msa0769720:CDS | 45.0% |
| CCCAACCCAAAACAAGATGT+TGG | - | chr5_2:38330224-38330243 | None:intergenic | 45.0% | |
| !! | GGGAGAGTACCATGAAGTTA+AGG | + | chr5_2:38330241-38330260 | Msa0769720:CDS | 45.0% |
| ! | GTTATTTCAACCTTACGCCG+TGG | - | chr5_2:38330525-38330544 | None:intergenic | 45.0% |
| CGGCGTAAGGTTGAAATAAC+GGG | + | chr5_2:38330525-38330544 | Msa0769720:intron | 45.0% | |
| GGCGTAAGGTTGAAATAACG+GGG | + | chr5_2:38330526-38330545 | Msa0769720:intron | 45.0% | |
| TAACTCAAAGGAGGAAGACG+TGG | + | chr5_2:38331079-38331098 | Msa0769720:CDS | 45.0% | |
| !! | TCAAGTCTTGGAGAAGCATC+AGG | + | chr5_2:38331308-38331327 | Msa0769720:CDS | 45.0% |
| AAGTGGTTGTAATTGCTGGG+TGG | + | chr5_2:38331594-38331613 | Msa0769720:CDS | 45.0% | |
| AGTGGTTGTAATTGCTGGGT+GGG | + | chr5_2:38331595-38331614 | Msa0769720:CDS | 45.0% | |
| GAACAGTGTGGGTTTGAGTA+TGG | + | chr5_2:38331694-38331713 | Msa0769720:CDS | 45.0% | |
| !! | ATGGCTTGGTGGGAAAGAAA+AGG | + | chr5_2:38331757-38331776 | Msa0769720:CDS | 45.0% |
| AAGAGGCCTAGTCACATACA+TGG | - | chr5_2:38330108-38330127 | None:intergenic | 45.0% | |
| ! | AGGCCCTAATTCTGGTGTTT+TGG | + | chr5_2:38330175-38330194 | Msa0769720:CDS | 45.0% |
| CCCAACCCAAAACAAGATGT+TGG | - | chr5_2:38330224-38330243 | None:intergenic | 45.0% | |
| !! | GGGAGAGTACCATGAAGTTA+AGG | + | chr5_2:38330241-38330260 | Msa0769720:CDS | 45.0% |
| ! | GTTATTTCAACCTTACGCCG+TGG | - | chr5_2:38330525-38330544 | None:intergenic | 45.0% |
| CGGCGTAAGGTTGAAATAAC+GGG | + | chr5_2:38330525-38330544 | Msa0769720:intron | 45.0% | |
| GGCGTAAGGTTGAAATAACG+GGG | + | chr5_2:38330526-38330545 | Msa0769720:intron | 45.0% | |
| TAACTCAAAGGAGGAAGACG+TGG | + | chr5_2:38331079-38331098 | Msa0769720:CDS | 45.0% | |
| !! | TCAAGTCTTGGAGAAGCATC+AGG | + | chr5_2:38331308-38331327 | Msa0769720:CDS | 45.0% |
| AAGTGGTTGTAATTGCTGGG+TGG | + | chr5_2:38331594-38331613 | Msa0769720:CDS | 45.0% | |
| AGTGGTTGTAATTGCTGGGT+GGG | + | chr5_2:38331595-38331614 | Msa0769720:CDS | 45.0% | |
| GAACAGTGTGGGTTTGAGTA+TGG | + | chr5_2:38331694-38331713 | Msa0769720:CDS | 45.0% | |
| !! | ATGGCTTGGTGGGAAAGAAA+AGG | + | chr5_2:38331757-38331776 | Msa0769720:CDS | 45.0% |
| CTCTCATTACCTCCACCAGA+AGG | + | chr5_2:38330155-38330174 | Msa0769720:CDS | 50.0% | |
| ACACCAGAATTAGGGCCTTC+TGG | - | chr5_2:38330173-38330192 | None:intergenic | 50.0% | |
| GTCAAAGCAGGCGTCACTTA+AGG | + | chr5_2:38330686-38330705 | Msa0769720:intron | 50.0% | |
| GCATCGTGCAACAGAGTTAG+AGG | - | chr5_2:38330854-38330873 | None:intergenic | 50.0% | |
| AACTCTGTTGCACGATGCAG+CGG | + | chr5_2:38330856-38330875 | Msa0769720:intron | 50.0% | |
| CTGAAGATGGATACCCTCCA+AGG | + | chr5_2:38331240-38331259 | Msa0769720:CDS | 50.0% | |
| TGAGAGAATGAAGTGGGAGC+AGG | + | chr5_2:38331724-38331743 | Msa0769720:CDS | 50.0% | |
| AATGAAGTGGGAGCAGGAGA+GGG | + | chr5_2:38331730-38331749 | Msa0769720:CDS | 50.0% | |
| CTCTCATTACCTCCACCAGA+AGG | + | chr5_2:38330155-38330174 | Msa0769720:CDS | 50.0% | |
| ACACCAGAATTAGGGCCTTC+TGG | - | chr5_2:38330173-38330192 | None:intergenic | 50.0% | |
| GTCAAAGCAGGCGTCACTTA+AGG | + | chr5_2:38330686-38330705 | Msa0769720:intron | 50.0% | |
| GCATCGTGCAACAGAGTTAG+AGG | - | chr5_2:38330854-38330873 | None:intergenic | 50.0% | |
| AACTCTGTTGCACGATGCAG+CGG | + | chr5_2:38330856-38330875 | Msa0769720:intron | 50.0% | |
| CTGAAGATGGATACCCTCCA+AGG | + | chr5_2:38331240-38331259 | Msa0769720:CDS | 50.0% | |
| TGAGAGAATGAAGTGGGAGC+AGG | + | chr5_2:38331724-38331743 | Msa0769720:CDS | 50.0% | |
| AATGAAGTGGGAGCAGGAGA+GGG | + | chr5_2:38331730-38331749 | Msa0769720:CDS | 50.0% | |
| GAATTAGGGCCTTCTGGTGG+AGG | - | chr5_2:38330167-38330186 | None:intergenic | 55.0% | |
| CCAGAATTAGGGCCTTCTGG+TGG | - | chr5_2:38330170-38330189 | None:intergenic | 55.0% | |
| CCACCAGAAGGCCCTAATTC+TGG | + | chr5_2:38330167-38330186 | Msa0769720:CDS | 55.0% | |
| GCAGCGAGTGCTAGAACTGT+TGG | - | chr5_2:38330929-38330948 | None:intergenic | 55.0% | |
| GTAGATGATTCCCTCCGTGC+CGG | + | chr5_2:38331332-38331351 | Msa0769720:CDS | 55.0% | |
| TAGATGATTCCCTCCGTGCC+GGG | + | chr5_2:38331333-38331352 | Msa0769720:CDS | 55.0% | |
| !! | CGAATTCTGGTTTCCCGGCA+CGG | - | chr5_2:38331349-38331368 | None:intergenic | 55.0% |
| TGCTGGGTGGGAAGCTATGA+TGG | + | chr5_2:38331607-38331626 | Msa0769720:CDS | 55.0% | |
| GAATGAAGTGGGAGCAGGAG+AGG | + | chr5_2:38331729-38331748 | Msa0769720:CDS | 55.0% | |
| !! | AGAGGGTTGGATGGCTTGGT+GGG | + | chr5_2:38331747-38331766 | Msa0769720:CDS | 55.0% |
| GAATTAGGGCCTTCTGGTGG+AGG | - | chr5_2:38330167-38330186 | None:intergenic | 55.0% | |
| CCAGAATTAGGGCCTTCTGG+TGG | - | chr5_2:38330170-38330189 | None:intergenic | 55.0% | |
| CCACCAGAAGGCCCTAATTC+TGG | + | chr5_2:38330167-38330186 | Msa0769720:CDS | 55.0% | |
| GCAGCGAGTGCTAGAACTGT+TGG | - | chr5_2:38330929-38330948 | None:intergenic | 55.0% | |
| GTAGATGATTCCCTCCGTGC+CGG | + | chr5_2:38331332-38331351 | Msa0769720:CDS | 55.0% | |
| TAGATGATTCCCTCCGTGCC+GGG | + | chr5_2:38331333-38331352 | Msa0769720:CDS | 55.0% | |
| !! | CGAATTCTGGTTTCCCGGCA+CGG | - | chr5_2:38331349-38331368 | None:intergenic | 55.0% |
| TGCTGGGTGGGAAGCTATGA+TGG | + | chr5_2:38331607-38331626 | Msa0769720:CDS | 55.0% | |
| GAATGAAGTGGGAGCAGGAG+AGG | + | chr5_2:38331729-38331748 | Msa0769720:CDS | 55.0% | |
| !! | AGAGGGTTGGATGGCTTGGT+GGG | + | chr5_2:38331747-38331766 | Msa0769720:CDS | 55.0% |
| TAGCACTCGCTGCCACGTTC+AGG | + | chr5_2:38330936-38330955 | Msa0769720:intron | 60.0% | |
| AGCACTCGCTGCCACGTTCA+GGG | + | chr5_2:38330937-38330956 | Msa0769720:intron | 60.0% | |
| !! | TTCTGGTTTCCCGGCACGGA+GGG | - | chr5_2:38331345-38331364 | None:intergenic | 60.0% |
| !! | ATTCTGGTTTCCCGGCACGG+AGG | - | chr5_2:38331346-38331365 | None:intergenic | 60.0% |
| AAGTGGGAGCAGGAGAGGGT+TGG | + | chr5_2:38331734-38331753 | Msa0769720:CDS | 60.0% | |
| CAGGAGAGGGTTGGATGGCT+TGG | + | chr5_2:38331743-38331762 | Msa0769720:CDS | 60.0% | |
| ! | GAGAGGGTTGGATGGCTTGG+TGG | + | chr5_2:38331746-38331765 | Msa0769720:CDS | 60.0% |
| TAGCACTCGCTGCCACGTTC+AGG | + | chr5_2:38330936-38330955 | Msa0769720:intron | 60.0% | |
| AGCACTCGCTGCCACGTTCA+GGG | + | chr5_2:38330937-38330956 | Msa0769720:intron | 60.0% | |
| !! | TTCTGGTTTCCCGGCACGGA+GGG | - | chr5_2:38331345-38331364 | None:intergenic | 60.0% |
| !! | ATTCTGGTTTCCCGGCACGG+AGG | - | chr5_2:38331346-38331365 | None:intergenic | 60.0% |
| AAGTGGGAGCAGGAGAGGGT+TGG | + | chr5_2:38331734-38331753 | Msa0769720:CDS | 60.0% | |
| CAGGAGAGGGTTGGATGGCT+TGG | + | chr5_2:38331743-38331762 | Msa0769720:CDS | 60.0% | |
| ! | GAGAGGGTTGGATGGCTTGG+TGG | + | chr5_2:38331746-38331765 | Msa0769720:CDS | 60.0% |
| GGGAGCAGGAGAGGGTTGGA+TGG | + | chr5_2:38331738-38331757 | Msa0769720:CDS | 65.0% | |
| GGGAGCAGGAGAGGGTTGGA+TGG | + | chr5_2:38331738-38331757 | Msa0769720:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 38330107 | 38332211 | 38330107 | ID=Msa0769720;Name=Msa0769720 |
| chr5_2 | mRNA | 38330107 | 38332211 | 38330107 | ID=Msa0769720-mRNA-1;Parent=Msa0769720;Name=Msa0769720-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.5|0.33|1|0|0.33|3|265|396 |
| chr5_2 | exon | 38330107 | 38330297 | 38330107 | ID=Msa0769720-mRNA-1:exon:12549;Parent=Msa0769720-mRNA-1 |
| chr5_2 | exon | 38330307 | 38330426 | 38330307 | ID=Msa0769720-mRNA-1:exon:12550;Parent=Msa0769720-mRNA-1 |
| chr5_2 | exon | 38331067 | 38332211 | 38331067 | ID=Msa0769720-mRNA-1:exon:12551;Parent=Msa0769720-mRNA-1 |
| chr5_2 | CDS | 38330107 | 38330297 | 38330107 | ID=Msa0769720-mRNA-1:cds;Parent=Msa0769720-mRNA-1 |
| chr5_2 | CDS | 38330307 | 38330426 | 38330307 | ID=Msa0769720-mRNA-1:cds;Parent=Msa0769720-mRNA-1 |
| chr5_2 | CDS | 38331067 | 38331946 | 38331067 | ID=Msa0769720-mRNA-1:cds;Parent=Msa0769720-mRNA-1 |
| chr5_2 | three_prime_UTR | 38331947 | 38332211 | 38331947 | ID=Msa0769720-mRNA-1:three_prime_utr;Parent=Msa0769720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
