Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365280 | XP_003610066.1 | 99.747 | 396 | 1 | 0 | 1 | 396 | 1 | 396 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365280 | sp|Q65XS5|BC10_ORYSJ | 37.931 | 319 | 158 | 10 | 101 | 387 | 78 | 388 | 5.72e-60 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365280 | G7JUB8 | 99.747 | 396 | 1 | 0 | 1 | 396 | 1 | 396 | 0.0 | 823 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1365280 | Msa1376420 | 0.815306 | 9.892672e-52 | -8.615850e-47 |
| Msa1365280 | Msa1391570 | 0.937151 | 5.520898e-98 | -8.615850e-47 |
| Msa1246690 | Msa1365280 | 0.908521 | 1.561929e-81 | -8.615850e-47 |
| Msa1333900 | Msa1365280 | 0.830468 | 2.887069e-55 | -8.615850e-47 |
| Msa1221780 | Msa1365280 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365280 | MtrunA17_Chr4g0071911 | 99.747 | 396 | 1 | 0 | 1 | 396 | 1 | 396 | 0.0 | 823 |
| Msa1365280 | MtrunA17_Chr2g0298501 | 78.173 | 394 | 83 | 3 | 1 | 393 | 1 | 392 | 0.0 | 640 |
| Msa1365280 | MtrunA17_Chr2g0298511 | 68.262 | 397 | 108 | 6 | 1 | 393 | 1 | 383 | 0.0 | 543 |
| Msa1365280 | MtrunA17_Chr1g0148241 | 63.472 | 386 | 135 | 2 | 14 | 393 | 13 | 398 | 0.0 | 525 |
| Msa1365280 | MtrunA17_Chr3g0138871 | 59.783 | 368 | 143 | 4 | 27 | 390 | 10 | 376 | 2.09e-172 | 486 |
| Msa1365280 | MtrunA17_Chr1g0151841 | 41.667 | 312 | 156 | 7 | 83 | 390 | 83 | 372 | 4.37e-76 | 240 |
| Msa1365280 | MtrunA17_Chr8g0341461 | 38.941 | 321 | 170 | 6 | 72 | 387 | 107 | 406 | 1.26e-70 | 227 |
| Msa1365280 | MtrunA17_Chr1g0209531 | 35.606 | 396 | 193 | 9 | 32 | 394 | 33 | 399 | 7.25e-70 | 225 |
| Msa1365280 | MtrunA17_Chr2g0276861 | 41.667 | 288 | 147 | 3 | 104 | 389 | 165 | 433 | 8.03e-70 | 226 |
| Msa1365280 | MtrunA17_Chr5g0423131 | 38.739 | 333 | 166 | 7 | 63 | 387 | 81 | 383 | 1.75e-68 | 221 |
| Msa1365280 | MtrunA17_Chr6g0484141 | 36.905 | 336 | 184 | 6 | 54 | 385 | 99 | 410 | 6.86e-66 | 215 |
| Msa1365280 | MtrunA17_Chr5g0394961 | 39.172 | 314 | 165 | 5 | 76 | 385 | 121 | 412 | 1.12e-64 | 212 |
| Msa1365280 | MtrunA17_Chr8g0384601 | 38.141 | 312 | 156 | 10 | 105 | 387 | 53 | 356 | 8.22e-61 | 200 |
| Msa1365280 | MtrunA17_Chr3g0136091 | 37.061 | 313 | 155 | 6 | 76 | 385 | 111 | 384 | 2.48e-60 | 200 |
| Msa1365280 | MtrunA17_Chr2g0289021 | 36.928 | 306 | 157 | 11 | 108 | 385 | 62 | 359 | 1.94e-56 | 189 |
| Msa1365280 | MtrunA17_Chr4g0073871 | 41.593 | 226 | 110 | 3 | 163 | 387 | 10 | 214 | 9.82e-55 | 180 |
| Msa1365280 | MtrunA17_Chr5g0394981 | 41.071 | 224 | 110 | 3 | 163 | 385 | 3 | 205 | 5.51e-52 | 172 |
| Msa1365280 | MtrunA17_Chr1g0170231 | 34.106 | 302 | 153 | 7 | 106 | 387 | 62 | 337 | 1.16e-45 | 160 |
| Msa1365280 | MtrunA17_Chr1g0170151 | 30.376 | 372 | 195 | 11 | 35 | 385 | 6 | 334 | 4.08e-39 | 143 |
| Msa1365280 | MtrunA17_Chr3g0137661 | 31.429 | 350 | 205 | 12 | 51 | 387 | 42 | 369 | 5.58e-39 | 143 |
| Msa1365280 | MtrunA17_Chr2g0322161 | 30.519 | 308 | 157 | 10 | 108 | 385 | 78 | 358 | 6.72e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1365280 | AT2G19160.2 | 67.342 | 395 | 124 | 5 | 1 | 393 | 1 | 392 | 0.0 | 573 |
| Msa1365280 | AT2G19160.1 | 67.342 | 395 | 124 | 5 | 1 | 393 | 1 | 392 | 0.0 | 573 |
| Msa1365280 | AT4G30060.2 | 67.424 | 396 | 123 | 5 | 1 | 392 | 1 | 394 | 0.0 | 568 |
| Msa1365280 | AT4G30060.1 | 67.424 | 396 | 123 | 5 | 1 | 392 | 1 | 394 | 0.0 | 568 |
| Msa1365280 | AT5G57270.3 | 65.782 | 377 | 123 | 5 | 22 | 393 | 10 | 385 | 0.0 | 528 |
| Msa1365280 | AT5G57270.1 | 65.782 | 377 | 123 | 5 | 22 | 393 | 10 | 385 | 0.0 | 528 |
| Msa1365280 | AT5G57270.4 | 65.782 | 377 | 123 | 5 | 22 | 393 | 10 | 385 | 0.0 | 528 |
| Msa1365280 | AT5G57270.5 | 65.782 | 377 | 123 | 5 | 22 | 393 | 10 | 385 | 0.0 | 528 |
| Msa1365280 | AT5G57270.2 | 65.782 | 377 | 123 | 5 | 22 | 393 | 10 | 385 | 0.0 | 528 |
| Msa1365280 | AT4G25870.1 | 60.465 | 387 | 147 | 6 | 12 | 393 | 1 | 386 | 0.0 | 519 |
| Msa1365280 | AT4G31350.4 | 63.271 | 373 | 135 | 2 | 21 | 393 | 4 | 374 | 7.03e-176 | 495 |
| Msa1365280 | AT4G31350.1 | 63.271 | 373 | 135 | 2 | 21 | 393 | 4 | 374 | 7.03e-176 | 495 |
| Msa1365280 | AT4G31350.2 | 63.271 | 373 | 135 | 2 | 21 | 393 | 4 | 374 | 7.03e-176 | 495 |
| Msa1365280 | AT4G31350.3 | 62.735 | 373 | 132 | 3 | 21 | 393 | 4 | 369 | 7.10e-171 | 482 |
| Msa1365280 | AT5G25970.1 | 43.816 | 283 | 135 | 4 | 108 | 387 | 119 | 380 | 1.26e-75 | 240 |
| Msa1365280 | AT5G25970.2 | 43.816 | 283 | 135 | 4 | 108 | 387 | 119 | 380 | 1.26e-75 | 240 |
| Msa1365280 | AT5G25970.3 | 43.816 | 283 | 135 | 4 | 108 | 387 | 119 | 380 | 1.26e-75 | 240 |
| Msa1365280 | AT1G73810.1 | 41.745 | 321 | 154 | 6 | 74 | 387 | 117 | 411 | 1.87e-75 | 240 |
| Msa1365280 | AT5G11730.1 | 43.463 | 283 | 136 | 5 | 108 | 387 | 118 | 379 | 1.18e-72 | 232 |
| Msa1365280 | AT1G10280.1 | 41.026 | 312 | 156 | 7 | 83 | 389 | 119 | 407 | 1.20e-70 | 228 |
| Msa1365280 | AT5G16170.1 | 42.908 | 282 | 144 | 3 | 108 | 387 | 136 | 402 | 2.80e-70 | 227 |
| Msa1365280 | AT3G21310.1 | 39.088 | 307 | 164 | 5 | 83 | 387 | 91 | 376 | 6.10e-70 | 225 |
| Msa1365280 | AT3G21310.3 | 39.088 | 307 | 164 | 5 | 83 | 387 | 91 | 376 | 6.10e-70 | 225 |
| Msa1365280 | AT1G68390.1 | 38.750 | 320 | 165 | 7 | 75 | 387 | 106 | 401 | 5.05e-69 | 223 |
| Msa1365280 | AT1G51770.1 | 42.049 | 283 | 140 | 4 | 108 | 387 | 124 | 385 | 6.81e-69 | 223 |
| Msa1365280 | AT1G10880.1 | 39.159 | 309 | 160 | 7 | 83 | 387 | 95 | 379 | 3.14e-65 | 213 |
| Msa1365280 | AT5G14550.3 | 37.778 | 315 | 159 | 9 | 101 | 386 | 58 | 364 | 2.41e-63 | 207 |
| Msa1365280 | AT5G14550.1 | 37.778 | 315 | 159 | 9 | 101 | 386 | 58 | 364 | 3.23e-63 | 207 |
| Msa1365280 | AT1G68380.1 | 38.811 | 286 | 149 | 6 | 108 | 389 | 124 | 387 | 8.75e-60 | 199 |
| Msa1365280 | AT5G14550.2 | 41.418 | 268 | 129 | 8 | 101 | 349 | 58 | 316 | 7.32e-59 | 195 |
| Msa1365280 | AT5G14550.4 | 37.954 | 303 | 148 | 10 | 101 | 386 | 58 | 337 | 1.43e-55 | 187 |
| Msa1365280 | AT1G62305.1 | 36.482 | 307 | 159 | 10 | 106 | 385 | 67 | 364 | 4.43e-55 | 186 |
| Msa1365280 | AT1G51770.2 | 37.809 | 283 | 125 | 5 | 108 | 387 | 124 | 358 | 1.98e-53 | 182 |
| Msa1365280 | AT1G11940.1 | 35.161 | 310 | 160 | 11 | 106 | 385 | 72 | 370 | 2.27e-53 | 182 |
| Msa1365280 | AT3G52060.1 | 33.103 | 290 | 158 | 7 | 108 | 387 | 75 | 338 | 4.91e-49 | 169 |
| Msa1365280 | AT5G25330.1 | 35.593 | 295 | 154 | 11 | 108 | 387 | 81 | 354 | 1.38e-46 | 164 |
| Msa1365280 | AT1G62305.3 | 35.357 | 280 | 137 | 7 | 106 | 366 | 67 | 321 | 3.58e-46 | 161 |
| Msa1365280 | AT5G22070.1 | 33.016 | 315 | 149 | 12 | 106 | 387 | 69 | 354 | 6.33e-42 | 151 |
| Msa1365280 | AT1G11940.2 | 41.899 | 179 | 95 | 4 | 106 | 278 | 72 | 247 | 3.56e-40 | 144 |
| Msa1365280 | AT1G62305.2 | 31.596 | 307 | 150 | 11 | 106 | 385 | 67 | 340 | 1.76e-39 | 144 |
| Msa1365280 | AT4G32290.1 | 33.677 | 291 | 170 | 9 | 108 | 387 | 93 | 371 | 1.45e-36 | 137 |
| Msa1365280 | AT3G21310.2 | 47.059 | 136 | 70 | 1 | 108 | 241 | 115 | 250 | 7.59e-36 | 132 |
Find 150 sgRNAs with CRISPR-Local
Find 506 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCTGCCGGCCGCATATTT+TGG | 0.032461 | tig0018212:-157650 | Msa1365280:three_prime_UTR |
| ATCTTCTCTTATTAGCTTTA+AGG | 0.068909 | tig0018212:-161163 | Msa1365280:intron |
| ATATTTAACATGGTAAATTT+TGG | 0.112275 | tig0018212:-157493 | Msa1365280:three_prime_UTR |
| ATTGAATTGAATTAAATTTC+TGG | 0.142756 | tig0018212:+164398 | None:intergenic |
| ACCTGTATTACTCAAAATTT+CGG | 0.191925 | tig0018212:-160197 | Msa1365280:CDS |
| GTCAGATAACTTGTTGCTTT+TGG | 0.194550 | tig0018212:-157735 | Msa1365280:three_prime_UTR |
| TCATGAGCCCTATATGATTT+TGG | 0.196809 | tig0018212:+159066 | None:intergenic |
| AGTCCAAGGTGTTGAATAAT+TGG | 0.203942 | tig0018212:+157792 | None:intergenic |
| TGAATTAAATTTCTGGTGTT+TGG | 0.219965 | tig0018212:+164405 | None:intergenic |
| CCTGTATTACTCAAAATTTC+GGG | 0.228123 | tig0018212:-160196 | Msa1365280:CDS |
| TGCATCGCGTGTTGTGATTA+AGG | 0.252817 | tig0018212:-163500 | Msa1365280:CDS |
| AACTCTGTTTGTTGGTGTTT+GGG | 0.264082 | tig0018212:+164443 | None:intergenic |
| GAAAGGAGGTTAACGATATA+AGG | 0.282463 | tig0018212:-157586 | Msa1365280:three_prime_UTR |
| AGCTAGTTTGATCGATTCTT+TGG | 0.297182 | tig0018212:-157757 | Msa1365280:three_prime_UTR |
| GGACCGAAAAGAATTGTTTC+TGG | 0.297694 | tig0018212:-163818 | Msa1365280:five_prime_UTR |
| TCATCGGTGTATTCTCTTGC+AGG | 0.305952 | tig0018212:+163529 | None:intergenic |
| AAAACAAAGTGCTGGTTATC+AGG | 0.312813 | tig0018212:+161475 | None:intergenic |
| AACAACTTGTCCAGTGTTTC+AGG | 0.313763 | tig0018212:+157826 | None:intergenic |
| TCGGACAAAGATTGGCGTTT+AGG | 0.323123 | tig0018212:-163754 | Msa1365280:CDS |
| CGATATAAGGTTGCTTCCTC+GGG | 0.327563 | tig0018212:-157573 | Msa1365280:three_prime_UTR |
| TTGACTGGTCCGAAAGAAAA+TGG | 0.328351 | tig0018212:-159092 | Msa1365280:CDS |
| AAACTCTGTTTGTTGGTGTT+TGG | 0.328816 | tig0018212:+164442 | None:intergenic |
| CAAAAGGTAAGCAGCATATA+TGG | 0.335007 | tig0018212:+157344 | None:intergenic |
| TTACTTGCCAACCTTCTTCC+AGG | 0.340675 | tig0018212:-159247 | Msa1365280:intron |
| GAATTAAATTTCTGGTGTTT+GGG | 0.341513 | tig0018212:+164406 | None:intergenic |
| AAGTCTTTCACCTCAACTTC+AGG | 0.344606 | tig0018212:+161096 | None:intergenic |
| CTTATTAGCTTTAAGGATCC+TGG | 0.362945 | tig0018212:-161156 | Msa1365280:intron |
| AAGATCAAAACTCTGTTTGT+TGG | 0.375767 | tig0018212:+164435 | None:intergenic |
| AATCCACATTGGCTTCTTCA+TGG | 0.376074 | tig0018212:+163684 | None:intergenic |
| CTTAATACCACAGCCTGGTT+TGG | 0.380386 | tig0018212:-159298 | Msa1365280:intron |
| GAGTGAATTTCCTAGCAAAT+AGG | 0.380561 | tig0018212:+157848 | None:intergenic |
| GTTGCTTCCTCGGGGATTGT+TGG | 0.390519 | tig0018212:-157564 | Msa1365280:three_prime_UTR |
| TGATGCAGAGAGACGGATAT+TGG | 0.394586 | tig0018212:-161515 | Msa1365280:CDS |
| AATGGCATCCAAAATCATAT+AGG | 0.399439 | tig0018212:-159074 | Msa1365280:CDS |
| AACATCTTTCGACGCATTCC+AGG | 0.404800 | tig0018212:-164255 | Msa1365280:intron |
| ATGGCATCCAAAATCATATA+GGG | 0.407190 | tig0018212:-159073 | Msa1365280:CDS |
| TGCAGATATTGCCCGGGTCT+CGG | 0.411129 | tig0018212:-163717 | Msa1365280:CDS |
| GTTGGCCTTGCTTGTGGAAT+GGG | 0.412422 | tig0018212:-157888 | Msa1365280:CDS |
| ACGATATAAGGTTGCTTCCT+CGG | 0.418086 | tig0018212:-157574 | Msa1365280:three_prime_UTR |
| TGAGCCGTTACTTTGTCAAC+CGG | 0.425501 | tig0018212:-162621 | Msa1365280:CDS |
| TGTCATATGAGAAACCAATA+TGG | 0.425967 | tig0018212:+157709 | None:intergenic |
| GGTGTGGGGTAAAATTTCTA+TGG | 0.434211 | tig0018212:-161539 | Msa1365280:CDS |
| CAAATCTTGATAATAATGAT+TGG | 0.437710 | tig0018212:+164318 | None:intergenic |
| TAACCTCCTTTCAATGTCTC+AGG | 0.438299 | tig0018212:+157597 | None:intergenic |
| CTCCCATTCCCATGCGGACC+AGG | 0.439348 | tig0018212:+161138 | None:intergenic |
| CAAAACTTTCTTAGTGAGAC+GGG | 0.440455 | tig0018212:+164355 | None:intergenic |
| ATCCTGGTCCGCATGGGAAT+GGG | 0.445467 | tig0018212:-161140 | Msa1365280:CDS |
| AAGTAACGGCTCACATGAAC+TGG | 0.446500 | tig0018212:+162631 | None:intergenic |
| ACCCAAAATATGCGGCCGGC+AGG | 0.450159 | tig0018212:+157648 | None:intergenic |
| GTCGCCTGGTTCCCTCCCAC+TGG | 0.454872 | tig0018212:-163419 | Msa1365280:CDS |
| AGATGAAGTCGGACAAAGAT+TGG | 0.456290 | tig0018212:-163762 | Msa1365280:CDS |
| TCTAGAAGAGAAGATGTAAC+AGG | 0.459145 | tig0018212:+163588 | None:intergenic |
| AAAATTTCGGGCTTACTGCC+AGG | 0.466717 | tig0018212:-160184 | Msa1365280:intron |
| CACATGAACTGGTTTAGACT+TGG | 0.467869 | tig0018212:+162642 | None:intergenic |
| GATCCTGGTCCGCATGGGAA+TGG | 0.469270 | tig0018212:-161141 | Msa1365280:CDS |
| CAAGGTAAACTGGCATTGCT+AGG | 0.472797 | tig0018212:-157624 | Msa1365280:three_prime_UTR |
| CAGGCTGAAGAACTGCTTTG+TGG | 0.473881 | tig0018212:+163607 | None:intergenic |
| GCAGCATGCTGTTATAGTTA+TGG | 0.473890 | tig0018212:-160226 | Msa1365280:CDS |
| ATGTCGTTTGCAGGTGGTGT+GGG | 0.476335 | tig0018212:-161554 | Msa1365280:intron |
| TACAGAAAGAAGTGCAAAGT+TGG | 0.477720 | tig0018212:-157906 | Msa1365280:intron |
| TGAAATTCTCACCTGGAAGA+AGG | 0.479456 | tig0018212:+159236 | None:intergenic |
| AATACCACAGCCTGGTTTGG+AGG | 0.479852 | tig0018212:-159295 | Msa1365280:intron |
| TGAGGTGAAAGACTTTAGAA+AGG | 0.485039 | tig0018212:-161088 | Msa1365280:CDS |
| GAAATTCACTCCTGAAACAC+TGG | 0.486818 | tig0018212:-157836 | Msa1365280:CDS |
| GGGAGGACGGTGCCGAGACC+CGG | 0.492209 | tig0018212:+163705 | None:intergenic |
| AGATTGGCGTTTAGGAAGCA+TGG | 0.501553 | tig0018212:-163746 | Msa1365280:CDS |
| GTGTATTCTCTTGCAGGAGC+AGG | 0.502351 | tig0018212:+163535 | None:intergenic |
| GCTGGTTATCAGGATCTTGA+AGG | 0.502696 | tig0018212:+161485 | None:intergenic |
| CTTACAAGAGGCTGACATCA+AGG | 0.502998 | tig0018212:+157302 | None:intergenic |
| CAATTCTTCCCCTCCAAACC+AGG | 0.505839 | tig0018212:+159285 | None:intergenic |
| TGTTACATCTTCTCTTCTAG+AGG | 0.506276 | tig0018212:-163586 | Msa1365280:CDS |
| AGTTGGCCTTGCTTGTGGAA+TGG | 0.507523 | tig0018212:-157889 | Msa1365280:CDS |
| ATCCTGGTGGAATTGCAAAC+TGG | 0.510654 | tig0018212:-159128 | Msa1365280:CDS |
| ATCCACATTGGCTTCTTCAT+GGG | 0.520386 | tig0018212:+163685 | None:intergenic |
| GTTGAGGCTTGATCGCCTGC+CGG | 0.522938 | tig0018212:-157663 | Msa1365280:three_prime_UTR |
| TGCAAAGTTGGCCTTGCTTG+TGG | 0.527174 | tig0018212:-157894 | Msa1365280:CDS |
| CCTTTATGGCAGGGTCATGA+AGG | 0.527603 | tig0018212:-162691 | Msa1365280:intron |
| TTCTTTCGGACCAGTCAACA+TGG | 0.528625 | tig0018212:+159097 | None:intergenic |
| TTTCCAATTATTCAACACCT+TGG | 0.532514 | tig0018212:-157795 | Msa1365280:CDS |
| ATTATTTAATTAGATGAAGT+CGG | 0.535376 | tig0018212:-163773 | Msa1365280:exon |
| TGTAAATTGCAGCATTGTTG+AGG | 0.537290 | tig0018212:-157679 | Msa1365280:three_prime_UTR |
| ACTTCTGAATAGAGACAGTA+AGG | 0.537801 | tig0018212:+157401 | None:intergenic |
| ATATAGTCAAAATGATATAG+AGG | 0.539449 | tig0018212:+161337 | None:intergenic |
| CAAATATCAGCTATGTTGAC+TGG | 0.539911 | tig0018212:-161294 | Msa1365280:intron |
| ATAGCATACCTTCTCATCAC+TGG | 0.539950 | tig0018212:+157992 | None:intergenic |
| GGTGATATGCAGATATTGCC+CGG | 0.545094 | tig0018212:-163724 | Msa1365280:CDS |
| TTTAAGGATCCTGGTCCGCA+TGG | 0.546986 | tig0018212:-161147 | Msa1365280:CDS |
| ATACCACAGCCTGGTTTGGA+GGG | 0.547665 | tig0018212:-159294 | Msa1365280:intron |
| GTTACATCTTCTCTTCTAGA+GGG | 0.550311 | tig0018212:-163585 | Msa1365280:CDS |
| TCAAAACTTTCTTAGTGAGA+CGG | 0.552792 | tig0018212:+164354 | None:intergenic |
| CCTGGCCACTGCGTATATCC+CGG | 0.557559 | tig0018212:+162602 | None:intergenic |
| GTAAACTGGCATTGCTAGGG+TGG | 0.558244 | tig0018212:-157620 | Msa1365280:three_prime_UTR |
| CAGAAAGTAAAACAAAGTGC+TGG | 0.558604 | tig0018212:+161467 | None:intergenic |
| GGAGGACGGTGCCGAGACCC+GGG | 0.558768 | tig0018212:+163706 | None:intergenic |
| ATCGATCAAACTAGCTGAAG+GGG | 0.560447 | tig0018212:+157764 | None:intergenic |
| TACCACAGCCTGGTTTGGAG+GGG | 0.561051 | tig0018212:-159293 | Msa1365280:intron |
| CCGGGATATACGCAGTGGCC+AGG | 0.561306 | tig0018212:-162602 | Msa1365280:intron |
| GGTCAGTAACCCATGTTGAC+TGG | 0.562757 | tig0018212:-159107 | Msa1365280:CDS |
| CACATTGGCTTCTTCATGGG+AGG | 0.564327 | tig0018212:+163688 | None:intergenic |
| TTCCTAGCAAATAGGTAACA+TGG | 0.566551 | tig0018212:+157856 | None:intergenic |
| GAGGTGAAAGACTTTAGAAA+GGG | 0.567652 | tig0018212:-161087 | Msa1365280:CDS |
| GAATCGATCAAACTAGCTGA+AGG | 0.568750 | tig0018212:+157762 | None:intergenic |
| AGCCATGTTACCTATTTGCT+AGG | 0.572145 | tig0018212:-157858 | Msa1365280:CDS |
| GATTGGCGTTTAGGAAGCAT+GGG | 0.574416 | tig0018212:-163745 | Msa1365280:CDS |
| ATTCTCACCTGGAAGAAGGT+TGG | 0.577162 | tig0018212:+159240 | None:intergenic |
| CATGTCGTTTGCAGGTGGTG+TGG | 0.577255 | tig0018212:-161555 | Msa1365280:intron |
| AATCGATCAAACTAGCTGAA+GGG | 0.579333 | tig0018212:+157763 | None:intergenic |
| TATTCTCTTGCAGGAGCAGG+TGG | 0.582557 | tig0018212:+163538 | None:intergenic |
| TTGCACCCAAAATATGCGGC+CGG | 0.585382 | tig0018212:+157644 | None:intergenic |
| AGGATTGTTTGATTTGTGTG+TGG | 0.585528 | tig0018212:-163839 | Msa1365280:five_prime_UTR |
| TTAAGGATCCTGGTCCGCAT+GGG | 0.588972 | tig0018212:-161146 | Msa1365280:CDS |
| TTTCGAAACAACCGGTGGTG+AGG | 0.589309 | tig0018212:+163468 | None:intergenic |
| CTGAAGAACTGCTTTGTGGA+GGG | 0.593232 | tig0018212:+163611 | None:intergenic |
| GACCAGTTTGCAATTCCACC+AGG | 0.594187 | tig0018212:+159126 | None:intergenic |
| AGACTTTAGAAAGGGTGCAC+AGG | 0.598502 | tig0018212:-161079 | Msa1365280:intron |
| TTAAACGTAAGAATCGAGAA+AGG | 0.598539 | tig0018212:+157377 | None:intergenic |
| TGAATCCCATTCCACAAGCA+AGG | 0.603455 | tig0018212:+157883 | None:intergenic |
| AAGGTAAACTGGCATTGCTA+GGG | 0.604250 | tig0018212:-157623 | Msa1365280:three_prime_UTR |
| TTACAAGAGGCTGACATCAA+GGG | 0.605516 | tig0018212:+157303 | None:intergenic |
| ACGCGATGCAATCTCTTCAT+CGG | 0.605620 | tig0018212:+163513 | None:intergenic |
| GACGTGTACACTAACATCAA+CGG | 0.607636 | tig0018212:+158016 | None:intergenic |
| TCGCATGTTACCTGAAGTTG+AGG | 0.610305 | tig0018212:-161106 | Msa1365280:CDS |
| TTGGCTTCTTCATGGGAGGA+CGG | 0.611072 | tig0018212:+163692 | None:intergenic |
| CTATGGTTGATGCAGAGAGA+CGG | 0.614637 | tig0018212:-161522 | Msa1365280:CDS |
| CTGGTTATCAGGATCTTGAA+GGG | 0.615592 | tig0018212:+161486 | None:intergenic |
| CTTTATGGCAGGGTCATGAA+GGG | 0.618829 | tig0018212:-162690 | Msa1365280:intron |
| GGGTGGCCTGAGACATTGAA+AGG | 0.619450 | tig0018212:-157603 | Msa1365280:three_prime_UTR |
| TACCTTGCACCCAAAATATG+CGG | 0.620200 | tig0018212:+157640 | None:intergenic |
| GAATGCGTCGAAAGATGTTG+AGG | 0.623192 | tig0018212:+164259 | None:intergenic |
| GTGATATGCAGATATTGCCC+GGG | 0.625004 | tig0018212:-163723 | Msa1365280:CDS |
| GCTGAAGAACTGCTTTGTGG+AGG | 0.626465 | tig0018212:+163610 | None:intergenic |
| CCGAAAAGAATTGTTTCTGG+AGG | 0.626875 | tig0018212:-163815 | Msa1365280:five_prime_UTR |
| ACTAAGACAATAATCCACAT+TGG | 0.635102 | tig0018212:+163673 | None:intergenic |
| CTGAAGGGGATTCAAGTCCA+AGG | 0.638147 | tig0018212:+157778 | None:intergenic |
| TCTCTTCTAGAGGGTGCAAG+CGG | 0.639407 | tig0018212:-163576 | Msa1365280:CDS |
| TCTTTCGGACCAGTCAACAT+GGG | 0.643350 | tig0018212:+159098 | None:intergenic |
| TGTCGTTTGCAGGTGGTGTG+GGG | 0.643747 | tig0018212:-161553 | Msa1365280:intron |
| ACACGTCACCAGTGATGAGA+AGG | 0.644755 | tig0018212:-158000 | Msa1365280:intron |
| CTGGTCCGCATGGGAATGGG+AGG | 0.644851 | tig0018212:-161137 | Msa1365280:CDS |
| CTCCCATGAAGAAGCCAATG+TGG | 0.646512 | tig0018212:-163687 | Msa1365280:CDS |
| GAGCCGTTACTTTGTCAACC+GGG | 0.655060 | tig0018212:-162620 | Msa1365280:CDS |
| CATATGAGAAACCAATATGG+AGG | 0.673924 | tig0018212:+157712 | None:intergenic |
| AAAACTTTCTTAGTGAGACG+GGG | 0.674383 | tig0018212:+164356 | None:intergenic |
| CAAGAGGCTGACATCAAGGG+AGG | 0.678504 | tig0018212:+157306 | None:intergenic |
| GATATAAGGTTGCTTCCTCG+GGG | 0.688803 | tig0018212:-157572 | Msa1365280:three_prime_UTR |
| TATCCCGGTTGACAAAGTAA+CGG | 0.706790 | tig0018212:+162617 | None:intergenic |
| TGGCCTGAGACATTGAAAGG+AGG | 0.712177 | tig0018212:-157600 | Msa1365280:three_prime_UTR |
| GTCAACCGGGATATACGCAG+TGG | 0.713259 | tig0018212:-162607 | Msa1365280:CDS |
| GAGTACCTCCCATTCCCATG+CGG | 0.734662 | tig0018212:+161132 | None:intergenic |
| CAGTCATCCAACAATCCCCG+AGG | 0.749854 | tig0018212:+157557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAATTGTTAATTTCTT+AGG | - | tig0018212:157714-157733 | Msa1365280:three_prime_UTR | 10.0% |
| !! | TTATAGAATACAAATTTAAA+CGG | - | tig0018212:160770-160789 | Msa1365280:intron | 10.0% |
| !!! | CTACTATTTTTTTTTTTTTA+TGG | + | tig0018212:161914-161933 | None:intergenic | 10.0% |
| !!! | TTAAAAAATTCTAACTTTTT+TGG | - | tig0018212:163300-163319 | Msa1365280:intron | 10.0% |
| !!! | TAAAAAATTCTAACTTTTTT+GGG | - | tig0018212:163301-163320 | Msa1365280:intron | 10.0% |
| !!! | TATAAGTTTTATATTTAACA+TGG | - | tig0018212:164257-164276 | Msa1365280:five_prime_UTR | 10.0% |
| !! | ATTGAATTGAATTAAATTTC+TGG | + | tig0018212:157365-157384 | None:intergenic | 15.0% |
| !! | ATTATTTAATTAGATGAAGT+CGG | - | tig0018212:157987-158006 | Msa1365280:intron | 15.0% |
| !! | GTCATAAATATATTTCAAAA+AGG | + | tig0018212:158485-158504 | None:intergenic | 15.0% |
| !! | TTTATCAGTAAAAGAATAAA+TGG | - | tig0018212:158563-158582 | Msa1365280:intron | 15.0% |
| !!! | ATTTTATCAGAAAACTAAAT+TGG | - | tig0018212:158678-158697 | Msa1365280:intron | 15.0% |
| !! | ACATTTATGAAGATTATATT+AGG | + | tig0018212:158927-158946 | None:intergenic | 15.0% |
| !! | TTTATAAAAATAAATCTACC+TGG | + | tig0018212:161597-161616 | None:intergenic | 15.0% |
| !! | AATTATCTATAATCAGTTAT+AGG | - | tig0018212:162395-162414 | Msa1365280:intron | 15.0% |
| !!! | AAAAAGTTGGTTTATTTATA+GGG | + | tig0018212:163066-163085 | None:intergenic | 15.0% |
| !!! | ATGAATTTTTATATTTTTGG+TGG | - | tig0018212:163248-163267 | Msa1365280:intron | 15.0% |
| !!! | AAAAAATTCTAACTTTTTTG+GGG | - | tig0018212:163302-163321 | Msa1365280:intron | 15.0% |
| !!! | TTGTGATTGAAAATTTTATA+GGG | - | tig0018212:163407-163426 | Msa1365280:CDS | 15.0% |
| !!! | TGGTGTTTTATTATAAAAAA+GGG | + | tig0018212:163526-163545 | None:intergenic | 15.0% |
| !!! | TTGGTGTTTTATTATAAAAA+AGG | + | tig0018212:163527-163546 | None:intergenic | 15.0% |
| !! | ATCATTATAGTTATTATTTC+TGG | - | tig0018212:163611-163630 | Msa1365280:CDS | 15.0% |
| !! | AAAACTTATATAACCAAAAA+TGG | + | tig0018212:164247-164266 | None:intergenic | 15.0% |
| !!! | ATATTTAACATGGTAAATTT+TGG | - | tig0018212:164267-164286 | Msa1365280:five_prime_UTR | 15.0% |
| !!! | TATTTAACATGGTAAATTTT+GGG | - | tig0018212:164268-164287 | Msa1365280:five_prime_UTR | 15.0% |
| !!! | CAAATCTTGATAATAATGAT+TGG | + | tig0018212:157445-157464 | None:intergenic | 20.0% |
| !! | AAGATAGTATAGTAAAAATC+TGG | + | tig0018212:157580-157599 | None:intergenic | 20.0% |
| !!! | TAAAGAAGTATTAACTTGTT+GGG | - | tig0018212:158628-158647 | Msa1365280:intron | 20.0% |
| !! | TAAATTGGAATGGTTAATAA+GGG | - | tig0018212:158693-158712 | Msa1365280:intron | 20.0% |
| !!! | TTTTTTGTTGGTAATTTCAA+TGG | - | tig0018212:158976-158995 | Msa1365280:intron | 20.0% |
| !! | AACTCCAAATTTACTTTATT+TGG | - | tig0018212:159421-159440 | Msa1365280:intron | 20.0% |
| !! | AATTAATCAAAACATCAACT+AGG | + | tig0018212:159471-159490 | None:intergenic | 20.0% |
| !!! | TGCTGATTAATTAGTTTTAT+TGG | - | tig0018212:160354-160373 | Msa1365280:intron | 20.0% |
| !! | ATATAGTCAAAATGATATAG+AGG | + | tig0018212:160426-160445 | None:intergenic | 20.0% |
| !!! | CTTTTCAATAAGCAATTAAT+GGG | + | tig0018212:160980-160999 | None:intergenic | 20.0% |
| !!! | TCTTTTCAATAAGCAATTAA+TGG | + | tig0018212:160981-161000 | None:intergenic | 20.0% |
| !!! | TTTTTAAAAAAAATTGGGGA+AGG | - | tig0018212:161033-161052 | Msa1365280:intron | 20.0% |
| !!! | TTTTAAAAAAAATTGGGGAA+GGG | - | tig0018212:161034-161053 | Msa1365280:intron | 20.0% |
| !!! | GGAAATTTTATTAATCAAAG+TGG | - | tig0018212:161057-161076 | Msa1365280:intron | 20.0% |
| !! | GAAAATGAATCTACTAAATT+GGG | + | tig0018212:161476-161495 | None:intergenic | 20.0% |
| !! | TGAAAATGAATCTACTAAAT+TGG | + | tig0018212:161477-161496 | None:intergenic | 20.0% |
| !! | CAATTTCTTTAATCTCATAA+AGG | - | tig0018212:161639-161658 | Msa1365280:intron | 20.0% |
| !!! | ATTTAGAGCAGAAATAAATA+TGG | + | tig0018212:161673-161692 | None:intergenic | 20.0% |
| !! | GTTTATCATTTCATTTAATG+AGG | - | tig0018212:161717-161736 | Msa1365280:intron | 20.0% |
| !!! | TTTTGTTACTTAAGCTTAAA+TGG | - | tig0018212:161794-161813 | Msa1365280:intron | 20.0% |
| !!! | AATACATTTTACGTTTTCTA+GGG | + | tig0018212:162371-162390 | None:intergenic | 20.0% |
| !!! | AAATACATTTTACGTTTTCT+AGG | + | tig0018212:162372-162391 | None:intergenic | 20.0% |
| !! | ATTTATATTTCATAGCTTCA+GGG | + | tig0018212:162422-162441 | None:intergenic | 20.0% |
| !! | AATTTATATTTCATAGCTTC+AGG | + | tig0018212:162423-162442 | None:intergenic | 20.0% |
| !!! | AAAAATGCAATTTTGCTTTA+TGG | - | tig0018212:162964-162983 | Msa1365280:intron | 20.0% |
| !!! | AAAATGCAATTTTGCTTTAT+GGG | - | tig0018212:162965-162984 | Msa1365280:intron | 20.0% |
| !!! | CAAAAAGTTGGTTTATTTAT+AGG | + | tig0018212:163067-163086 | None:intergenic | 20.0% |
| !!! | AAATTTTCAATCACAACTTT+TGG | + | tig0018212:163403-163422 | None:intergenic | 20.0% |
| !!! | GTTGTGATTGAAAATTTTAT+AGG | - | tig0018212:163406-163425 | Msa1365280:CDS | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | - | tig0018212:163475-163494 | Msa1365280:CDS | 20.0% |
| !!! | GTTTTATTATAAAAAAGGGA+GGG | + | tig0018212:163522-163541 | None:intergenic | 20.0% |
| !!! | TGTTTTATTATAAAAAAGGG+AGG | + | tig0018212:163523-163542 | None:intergenic | 20.0% |
| !! | TAATGATATTACTACAGAAA+GGG | + | tig0018212:163598-163617 | None:intergenic | 20.0% |
| !! | ATAATGATATTACTACAGAA+AGG | + | tig0018212:163599-163618 | None:intergenic | 20.0% |
| !! | CATAACAAGAAAAAATGAAA+AGG | + | tig0018212:163687-163706 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTGTTATGTTTTG+CGG | - | tig0018212:163692-163711 | Msa1365280:CDS | 20.0% |
| !! | TTATATAACCAAAAATGGAA+GGG | + | tig0018212:164242-164261 | None:intergenic | 20.0% |
| !!! | ATTTAACATGGTAAATTTTG+GGG | - | tig0018212:164269-164288 | Msa1365280:five_prime_UTR | 20.0% |
| !!! | GAATTAAATTTCTGGTGTTT+GGG | + | tig0018212:157357-157376 | None:intergenic | 25.0% |
| !!! | TGAATTAAATTTCTGGTGTT+TGG | + | tig0018212:157358-157377 | None:intergenic | 25.0% |
| !! | GATTGAATTTAAAGTGTAAG+AGG | - | tig0018212:157824-157843 | Msa1365280:CDS | 25.0% |
| !! | TTTTCTGCATCAATCTATTT+AGG | - | tig0018212:157901-157920 | Msa1365280:CDS | 25.0% |
| !!! | TTTGATTTTTTCGAAACAAC+CGG | + | tig0018212:158303-158322 | None:intergenic | 25.0% |
| !!! | GTAAAGAAGTATTAACTTGT+TGG | - | tig0018212:158627-158646 | Msa1365280:intron | 25.0% |
| ! | ATCAGAAAACTAAATTGGAA+TGG | - | tig0018212:158683-158702 | Msa1365280:intron | 25.0% |
| ! | CTAAATTGGAATGGTTAATA+AGG | - | tig0018212:158692-158711 | Msa1365280:intron | 25.0% |
| ! | AAATTGGAATGGTTAATAAG+GGG | - | tig0018212:158694-158713 | Msa1365280:intron | 25.0% |
| ! | TTCAAGCAAAGCATAAATTT+CGG | + | tig0018212:158744-158763 | None:intergenic | 25.0% |
| ! | TTTATGCTTTGCTTGAAAAT+TGG | - | tig0018212:158747-158766 | Msa1365280:intron | 25.0% |
| !!! | TATCCTGAACTTTTTTTTGT+TGG | - | tig0018212:158964-158983 | Msa1365280:intron | 25.0% |
| ! | TTACCAACAAAAAAAAGTTC+AGG | + | tig0018212:158970-158989 | None:intergenic | 25.0% |
| ! | CAAGCCAAATAAAGTAAATT+TGG | + | tig0018212:159428-159447 | None:intergenic | 25.0% |
| !!! | GAATTCATTGCTGATTTTTT+TGG | - | tig0018212:159501-159520 | Msa1365280:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | tig0018212:159840-159859 | Msa1365280:intron | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | + | tig0018212:159975-159994 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | tig0018212:159982-160001 | Msa1365280:intron | 25.0% |
| ! | GTTCTATCAAAGATCATATT+TGG | + | tig0018212:160022-160041 | None:intergenic | 25.0% |
| !!! | ACTTTGTTTTACTTTCTGAT+AGG | - | tig0018212:160298-160317 | Msa1365280:intron | 25.0% |
| !!! | ATCTTCTCTTATTAGCTTTA+AGG | - | tig0018212:160597-160616 | Msa1365280:intron | 25.0% |
| ! | AACACTTATCAACTTATATG+AGG | + | tig0018212:160839-160858 | None:intergenic | 25.0% |
| ! | AATAAGCAATTAATGGGAAT+AGG | + | tig0018212:160974-160993 | None:intergenic | 25.0% |
| ! | TTTAAAAAAAATTGGGGAAG+GGG | - | tig0018212:161035-161054 | Msa1365280:intron | 25.0% |
| ! | AAGAAAAGTTATGGAGAAAT+AGG | + | tig0018212:161234-161253 | None:intergenic | 25.0% |
| ! | TAGATTGGAAAGAAAAGTTA+TGG | + | tig0018212:161243-161262 | None:intergenic | 25.0% |
| ! | TTGAACATAAAGTCATAGAT+TGG | + | tig0018212:161258-161277 | None:intergenic | 25.0% |
| !!! | TTTTGAGTAATACAGGTAAT+CGG | + | tig0018212:161560-161579 | None:intergenic | 25.0% |
| ! | ACCTGTATTACTCAAAATTT+CGG | - | tig0018212:161563-161582 | Msa1365280:intron | 25.0% |
| ! | TTTAATGAGGTTATATATGC+TGG | - | tig0018212:161730-161749 | Msa1365280:intron | 25.0% |
| ! | TTAATGAGGTTATATATGCT+GGG | - | tig0018212:161731-161750 | Msa1365280:intron | 25.0% |
| !! | AAAAGTTTCAGTGCATATTT+TGG | + | tig0018212:161839-161858 | None:intergenic | 25.0% |
| !!! | TATCCTTTTAGAATTTTGTG+AGG | + | tig0018212:162010-162029 | None:intergenic | 25.0% |
| !! | ATTCTAAAAGGATAGCAAAA+TGG | - | tig0018212:162016-162035 | Msa1365280:intron | 25.0% |
| !! | GGAGTTTCTTTTGTATTTTA+GGG | + | tig0018212:162171-162190 | None:intergenic | 25.0% |
| !! | AGGAGTTTCTTTTGTATTTT+AGG | + | tig0018212:162172-162191 | None:intergenic | 25.0% |
| ! | AATGCATAAGTTAGATTAAC+TGG | + | tig0018212:162596-162615 | None:intergenic | 25.0% |
| !! | TACTCAATATTCATTCCTTT+TGG | - | tig0018212:162778-162797 | Msa1365280:intron | 25.0% |
| ! | GAGTAGATTTAAATACTTGT+TGG | - | tig0018212:162885-162904 | Msa1365280:intron | 25.0% |
| ! | AAAACGTATTTAACCCAAAA+AGG | + | tig0018212:163035-163054 | None:intergenic | 25.0% |
| !!! | TTTTGGGTTAAATACGTTTT+TGG | - | tig0018212:163035-163054 | Msa1365280:intron | 25.0% |
| !!! | AGTGAAGATGGAAATTTTTT+GGG | + | tig0018212:163098-163117 | None:intergenic | 25.0% |
| !!! | AAGTGAAGATGGAAATTTTT+TGG | + | tig0018212:163099-163118 | None:intergenic | 25.0% |
| ! | TACATACGAGTTTACTTAAA+AGG | + | tig0018212:163131-163150 | None:intergenic | 25.0% |
| !! | AAAAGTCTAAAACGAAAAGT+TGG | - | tig0018212:163462-163481 | Msa1365280:CDS | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | - | tig0018212:163474-163493 | Msa1365280:CDS | 25.0% |
| !! | AAACACCAAATCAAACTTTT+AGG | - | tig0018212:163538-163557 | Msa1365280:CDS | 25.0% |
| ! | ATTCTCCTAAAAGTTTGATT+TGG | + | tig0018212:163546-163565 | None:intergenic | 25.0% |
| ! | AATTAAAAGAGACATCAAGT+TGG | - | tig0018212:163563-163582 | Msa1365280:CDS | 25.0% |
| ! | ATTAAAAGAGACATCAAGTT+GGG | - | tig0018212:163564-163583 | Msa1365280:CDS | 25.0% |
| ! | AATGATATTACTACAGAAAG+GGG | + | tig0018212:163597-163616 | None:intergenic | 25.0% |
| !! | ATATTTTTCCCTTCCATTTT+TGG | - | tig0018212:164231-164250 | Msa1365280:intron | 25.0% |
| ! | CTTATATAACCAAAAATGGA+AGG | + | tig0018212:164243-164262 | None:intergenic | 25.0% |
| !! | TTTAACATGGTAAATTTTGG+GGG | - | tig0018212:164270-164289 | Msa1365280:five_prime_UTR | 25.0% |
| AAGATCAAAACTCTGTTTGT+TGG | + | tig0018212:157328-157347 | None:intergenic | 30.0% | |
| TCAAAACTTTCTTAGTGAGA+CGG | + | tig0018212:157409-157428 | None:intergenic | 30.0% | |
| ! | TCAGTTTTTGTACCCAAATA+CGG | - | tig0018212:157618-157637 | Msa1365280:three_prime_UTR | 30.0% |
| ! | TGTATATGTTTCTGAACATG+TGG | - | tig0018212:157779-157798 | Msa1365280:exon | 30.0% |
| ! | GTATATGTTTCTGAACATGT+GGG | - | tig0018212:157780-157799 | Msa1365280:exon | 30.0% |
| ! | GTGATTATTCATTTGCTACT+AGG | - | tig0018212:157802-157821 | Msa1365280:CDS | 30.0% |
| ACTAAGACAATAATCCACAT+TGG | + | tig0018212:158090-158109 | None:intergenic | 30.0% | |
| !! | AACTTTTTCCAAGTAAGTGT+TGG | - | tig0018212:158378-158397 | Msa1365280:intron | 30.0% |
| AAATTTCTTCCAAACCGATA+AGG | + | tig0018212:158456-158475 | None:intergenic | 30.0% | |
| CATCAACTATACTACTAAAC+GGG | + | tig0018212:158532-158551 | None:intergenic | 30.0% | |
| CCATCAACTATACTACTAAA+CGG | + | tig0018212:158533-158552 | None:intergenic | 30.0% | |
| AGTTGTGACAATGATGTTTA+CGG | - | tig0018212:158863-158882 | Msa1365280:intron | 30.0% | |
| TAATTTCAATGGCTGATACT+TGG | - | tig0018212:158987-159006 | Msa1365280:intron | 30.0% | |
| !! | GTAGCTTATGTTTTATTCAG+TGG | - | tig0018212:159362-159381 | Msa1365280:intron | 30.0% |
| TAATCAAAACATCAACTAGG+AGG | + | tig0018212:159468-159487 | None:intergenic | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | tig0018212:159836-159855 | None:intergenic | 30.0% |
| TTGATCTACTCTTCTTACAA+CGG | + | tig0018212:159906-159925 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | - | tig0018212:159907-159926 | Msa1365280:intron | 30.0% | |
| ! | GTTTCTCTAATGGTTTTCTT+AGG | + | tig0018212:159965-159984 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | tig0018212:159987-160006 | None:intergenic | 30.0% |
| AGATTTAGAGGTCAATGAAT+TGG | - | tig0018212:159994-160013 | Msa1365280:intron | 30.0% | |
| TGATCTTTGATAGAACACTA+TGG | - | tig0018212:160026-160045 | Msa1365280:intron | 30.0% | |
| !!! | TGGTTGTTGTTGTTGTTTTT+AGG | - | tig0018212:160094-160113 | Msa1365280:intron | 30.0% |
| TTTACTTTCTGATAGGTACA+TGG | - | tig0018212:160305-160324 | Msa1365280:intron | 30.0% | |
| ATCAAGCAATATTACATAGC+AGG | - | tig0018212:160499-160518 | Msa1365280:intron | 30.0% | |
| TCAAGCAATATTACATAGCA+GGG | - | tig0018212:160500-160519 | Msa1365280:intron | 30.0% | |
| TTAAAAAAAATTGGGGAAGG+GGG | - | tig0018212:161036-161055 | Msa1365280:intron | 30.0% | |
| ATTAATCAAAGTGGCACTAA+TGG | - | tig0018212:161066-161085 | Msa1365280:intron | 30.0% | |
| AGAATATCAATTCTAGTGCA+TGG | - | tig0018212:161289-161308 | Msa1365280:intron | 30.0% | |
| ! | GTTGAGTCTTTTGTCATAAA+AGG | - | tig0018212:161317-161336 | Msa1365280:CDS | 30.0% |
| CCTGTATTACTCAAAATTTC+GGG | - | tig0018212:161564-161583 | Msa1365280:intron | 30.0% | |
| TCTCTCTTTAGCATAGTATA+AGG | - | tig0018212:161764-161783 | Msa1365280:intron | 30.0% | |
| ! | TTTTATGGCTTAGATGGTTA+AGG | - | tig0018212:162256-162275 | Msa1365280:intron | 30.0% |
| !!! | TTTTGCTTTTCTAGTTTGGA+TGG | + | tig0018212:162339-162358 | None:intergenic | 30.0% |
| !!! | AAGGTTTTGCTTTTCTAGTT+TGG | + | tig0018212:162343-162362 | None:intergenic | 30.0% |
| ! | TGATTTTAGATTGTTGATCC+TGG | - | tig0018212:162616-162635 | Msa1365280:CDS | 30.0% |
| !!! | TTTTGGATGCCATTTTCTTT+CGG | + | tig0018212:162680-162699 | None:intergenic | 30.0% |
| AATGGCATCCAAAATCATAT+AGG | - | tig0018212:162686-162705 | Msa1365280:intron | 30.0% | |
| ATGGCATCCAAAATCATATA+GGG | - | tig0018212:162687-162706 | Msa1365280:intron | 30.0% | |
| ! | TGTGTTTCTATTGATGGAAA+GGG | + | tig0018212:162844-162863 | None:intergenic | 30.0% |
| ! | TTGTGTTTCTATTGATGGAA+AGG | + | tig0018212:162845-162864 | None:intergenic | 30.0% |
| ATCAATAGAAACACAAGTCT+GGG | - | tig0018212:162849-162868 | Msa1365280:intron | 30.0% | |
| AGTATTTAAATCTACTCCAG+TGG | + | tig0018212:162882-162901 | None:intergenic | 30.0% | |
| ! | TATGACAGTTCATTCCTTTT+TGG | - | tig0018212:163018-163037 | Msa1365280:intron | 30.0% |
| ! | ATGACAGTTCATTCCTTTTT+GGG | - | tig0018212:163019-163038 | Msa1365280:intron | 30.0% |
| ! | AGTTGGTTTATTTATAGGGA+GGG | + | tig0018212:163062-163081 | None:intergenic | 30.0% |
| ! | AAGTTGGTTTATTTATAGGG+AGG | + | tig0018212:163063-163082 | None:intergenic | 30.0% |
| !!! | GTGAAGATGGAAATTTTTTG+GGG | + | tig0018212:163097-163116 | None:intergenic | 30.0% |
| ATACGAGTTTACTTAAAAGG+AGG | + | tig0018212:163128-163147 | None:intergenic | 30.0% | |
| ACACGAGTCAACTTAAAAAT+AGG | - | tig0018212:163375-163394 | Msa1365280:intron | 30.0% | |
| CACGAGTCAACTTAAAAATA+GGG | - | tig0018212:163376-163395 | Msa1365280:intron | 30.0% | |
| ! | AAGTCGAAGGAAAATTTTAG+AGG | - | tig0018212:163435-163454 | Msa1365280:CDS | 30.0% |
| ! | AGTCGAAGGAAAATTTTAGA+GGG | - | tig0018212:163436-163455 | Msa1365280:CDS | 30.0% |
| !! | AAGTTGGTATATTTATAGGG+AGG | - | tig0018212:163478-163497 | Msa1365280:CDS | 30.0% |
| ! | AGTTGGTATATTTATAGGGA+GGG | - | tig0018212:163479-163498 | Msa1365280:CDS | 30.0% |
| ! | GGGAGGGTTAAAAATATTTT+TGG | + | tig0018212:163506-163525 | None:intergenic | 30.0% |
| ! | TTAAAAGAGACATCAAGTTG+GGG | - | tig0018212:163565-163584 | Msa1365280:CDS | 30.0% |
| TTTGTTGAGAATGAATGAAC+TGG | - | tig0018212:163808-163827 | Msa1365280:five_prime_UTR | 30.0% | |
| TTTCCAATTATTCAACACCT+TGG | - | tig0018212:163965-163984 | Msa1365280:intron | 30.0% | |
| TGTCATATGAGAAACCAATA+TGG | + | tig0018212:164054-164073 | None:intergenic | 30.0% | |
| TTAAACGTAAGAATCGAGAA+AGG | + | tig0018212:164386-164405 | None:intergenic | 30.0% | |
| GATAGAAAAACACTGACAAA+AGG | + | tig0018212:164435-164454 | None:intergenic | 30.0% | |
| ! | AACTCTGTTTGTTGGTGTTT+GGG | + | tig0018212:157320-157339 | None:intergenic | 35.0% |
| ! | AAACTCTGTTTGTTGGTGTT+TGG | + | tig0018212:157321-157340 | None:intergenic | 35.0% |
| AAAACTTTCTTAGTGAGACG+GGG | + | tig0018212:157407-157426 | None:intergenic | 35.0% | |
| CAAAACTTTCTTAGTGAGAC+GGG | + | tig0018212:157408-157427 | None:intergenic | 35.0% | |
| ! | AAAGATTCCCTTTTTGTACC+TGG | + | tig0018212:157526-157545 | None:intergenic | 35.0% |
| TTTGTACCCAAATACGGAAA+TGG | - | tig0018212:157624-157643 | Msa1365280:three_prime_UTR | 35.0% | |
| TTGTACCCAAATACGGAAAT+GGG | - | tig0018212:157625-157644 | Msa1365280:three_prime_UTR | 35.0% | |
| AAAACCCCATTTCCGTATTT+GGG | + | tig0018212:157633-157652 | None:intergenic | 35.0% | |
| !! | AGGATTGTTTGATTTGTGTG+TGG | - | tig0018212:157921-157940 | Msa1365280:intron | 35.0% |
| ! | CCTCCAGAAACAATTCTTTT+CGG | + | tig0018212:157948-157967 | None:intergenic | 35.0% |
| TCTAGAAGAGAAGATGTAAC+AGG | + | tig0018212:158175-158194 | None:intergenic | 35.0% | |
| TGTTACATCTTCTCTTCTAG+AGG | - | tig0018212:158174-158193 | Msa1365280:intron | 35.0% | |
| GTTACATCTTCTCTTCTAGA+GGG | - | tig0018212:158175-158194 | Msa1365280:intron | 35.0% | |
| ! | TGTCCCATAATTTTTCCAGT+GGG | + | tig0018212:158359-158378 | None:intergenic | 35.0% |
| ! | TTGTCCCATAATTTTTCCAG+TGG | + | tig0018212:158360-158379 | None:intergenic | 35.0% |
| TAAAGTAGCCAACACTTACT+TGG | + | tig0018212:158389-158408 | None:intergenic | 35.0% | |
| TTTCTCAGTTATCGCCTTAT+CGG | - | tig0018212:158439-158458 | Msa1365280:intron | 35.0% | |
| CCGTTTAGTAGTATAGTTGA+TGG | - | tig0018212:158530-158549 | Msa1365280:intron | 35.0% | |
| CAAAGCATAAATTTCGGCTA+AGG | + | tig0018212:158738-158757 | None:intergenic | 35.0% | |
| TTGGTAGAGTTTCTCAAACT+TGG | - | tig0018212:158766-158785 | Msa1365280:intron | 35.0% | |
| TGGTAGAGTTTCTCAAACTT+GGG | - | tig0018212:158767-158786 | Msa1365280:intron | 35.0% | |
| ACTTGGGTAATGATGTACAA+AGG | - | tig0018212:158783-158802 | Msa1365280:intron | 35.0% | |
| CATAAAGGAGAAAATCTTCC+AGG | + | tig0018212:159057-159076 | None:intergenic | 35.0% | |
| ! | CTGGAAGATTTTCTCCTTTA+TGG | - | tig0018212:159055-159074 | Msa1365280:CDS | 35.0% |
| ! | AAGATTTTCTCCTTTATGGC+AGG | - | tig0018212:159059-159078 | Msa1365280:CDS | 35.0% |
| ! | AGATTTTCTCCTTTATGGCA+GGG | - | tig0018212:159060-159079 | Msa1365280:CDS | 35.0% |
| GTAACAAGACTATATGTACC+TGG | + | tig0018212:159179-159198 | None:intergenic | 35.0% | |
| AGATTGCCAAAGCAAAACAA+GGG | + | tig0018212:159291-159310 | None:intergenic | 35.0% | |
| TAGATTGCCAAAGCAAAACA+AGG | + | tig0018212:159292-159311 | None:intergenic | 35.0% | |
| GGAATAAGTTTAACCTCATC+TGG | - | tig0018212:159383-159402 | Msa1365280:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | tig0018212:159629-159648 | Msa1365280:intron | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | + | tig0018212:159638-159657 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | tig0018212:159642-159661 | Msa1365280:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | tig0018212:159829-159848 | Msa1365280:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | tig0018212:159849-159868 | Msa1365280:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | tig0018212:159854-159873 | Msa1365280:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | tig0018212:159910-159929 | Msa1365280:intron | 35.0% | |
| ! | ACTAGAAAACTACTGGTTAC+TGG | + | tig0018212:160163-160182 | None:intergenic | 35.0% |
| ! | AGTAACCAGTAGTTTTCTAG+TGG | - | tig0018212:160162-160181 | Msa1365280:intron | 35.0% |
| !! | AAAACAAAGTGCTGGTTATC+AGG | + | tig0018212:160288-160307 | None:intergenic | 35.0% |
| CAGAAAGTAAAACAAAGTGC+TGG | + | tig0018212:160296-160315 | None:intergenic | 35.0% | |
| CAAATATCAGCTATGTTGAC+TGG | - | tig0018212:160466-160485 | Msa1365280:intron | 35.0% | |
| !! | CTTATTAGCTTTAAGGATCC+TGG | - | tig0018212:160604-160623 | Msa1365280:intron | 35.0% |
| ! | TGAGGTGAAAGACTTTAGAA+AGG | - | tig0018212:160672-160691 | Msa1365280:intron | 35.0% |
| ! | GAGGTGAAAGACTTTAGAAA+GGG | - | tig0018212:160673-160692 | Msa1365280:intron | 35.0% |
| ACTGAATTCTATCTCCAACA+TGG | + | tig0018212:160723-160742 | None:intergenic | 35.0% | |
| AAGTAGCTTCTACAAAAGTG+AGG | - | tig0018212:160876-160895 | Msa1365280:intron | 35.0% | |
| AATTGAAAATGTTGCAACCC+TGG | + | tig0018212:161013-161032 | None:intergenic | 35.0% | |
| CATTATACAACTGTCTCTGA+GGG | - | tig0018212:161090-161109 | Msa1365280:CDS | 35.0% | |
| ATTATACAACTGTCTCTGAG+GGG | - | tig0018212:161091-161110 | Msa1365280:CDS | 35.0% | |
| !! | AGATTAGCCTTGTAACTTCA+AGG | + | tig0018212:161131-161150 | None:intergenic | 35.0% |
| TGTAAAATGATGCACACTTG+AGG | + | tig0018212:161172-161191 | None:intergenic | 35.0% | |
| ! | GAAGAGTAGTGATACTGATT+GGG | + | tig0018212:161409-161428 | None:intergenic | 35.0% |
| AGAAGAGTAGTGATACTGAT+TGG | + | tig0018212:161410-161429 | None:intergenic | 35.0% | |
| TTGTTCAATTTCTTCTGCAG+TGG | - | tig0018212:161497-161516 | Msa1365280:CDS | 35.0% | |
| !! | CCCGAAATTTTGAGTAATAC+AGG | + | tig0018212:161567-161586 | None:intergenic | 35.0% |
| !! | ACTTGTTTAGCTTGATGACT+AGG | + | tig0018212:161699-161718 | None:intergenic | 35.0% |
| AAAATCGTAGAGCAAAACAG+AGG | + | tig0018212:161888-161907 | None:intergenic | 35.0% | |
| ACAGGTATGTAAACACATAC+AGG | - | tig0018212:161960-161979 | Msa1365280:intron | 35.0% | |
| CAGGTATGTAAACACATACA+GGG | - | tig0018212:161961-161980 | Msa1365280:intron | 35.0% | |
| GTGCCTCACAAAATTCTAAA+AGG | - | tig0018212:162004-162023 | Msa1365280:intron | 35.0% | |
| TTAGGGAGCAGATCATATAT+GGG | + | tig0018212:162154-162173 | None:intergenic | 35.0% | |
| TTTAGGGAGCAGATCATATA+TGG | + | tig0018212:162155-162174 | None:intergenic | 35.0% | |
| AAGAAACTCCTTATTGTCCT+AGG | - | tig0018212:162181-162200 | Msa1365280:intron | 35.0% | |
| CTATATCTCCTAGGACAATA+AGG | + | tig0018212:162192-162211 | None:intergenic | 35.0% | |
| ACATCAGTTCTATATCTCCT+AGG | + | tig0018212:162201-162220 | None:intergenic | 35.0% | |
| ! | CATCTTATGTGCCAGTTTTA+TGG | - | tig0018212:162241-162260 | Msa1365280:intron | 35.0% |
| AACCATCTAAGCCATAAAAC+TGG | + | tig0018212:162255-162274 | None:intergenic | 35.0% | |
| !! | TACGTTTTCTAGGGACAAAA+AGG | + | tig0018212:162362-162381 | None:intergenic | 35.0% |
| AATTTCTTAATACCACAGCC+TGG | - | tig0018212:162457-162476 | Msa1365280:intron | 35.0% | |
| ! | TTTTAGATTGTTGATCCTGG+TGG | - | tig0018212:162619-162638 | Msa1365280:CDS | 35.0% |
| ! | TCATGAGCCCTATATGATTT+TGG | + | tig0018212:162697-162716 | None:intergenic | 35.0% |
| !! | CGAGCTTTTGAAGAATATCA+CGG | - | tig0018212:162726-162745 | Msa1365280:intron | 35.0% |
| ! | GTGTTTCTATTGATGGAAAG+GGG | + | tig0018212:162843-162862 | None:intergenic | 35.0% |
| ! | CAGACTTGTGTTTCTATTGA+TGG | + | tig0018212:162850-162869 | None:intergenic | 35.0% |
| CATCAATAGAAACACAAGTC+TGG | - | tig0018212:162848-162867 | Msa1365280:intron | 35.0% | |
| TGGGGACTAAAACAAAAAGT+TGG | + | tig0018212:163079-163098 | None:intergenic | 35.0% | |
| TTATAGGGACTAAAAGTCGA+AGG | - | tig0018212:163422-163441 | Msa1365280:CDS | 35.0% | |
| !! | TAAAAGAGACATCAAGTTGG+GGG | - | tig0018212:163566-163585 | Msa1365280:CDS | 35.0% |
| AATGAAAAGGCAATGATGAG+TGG | + | tig0018212:163674-163693 | None:intergenic | 35.0% | |
| CTTCTTTCTGTAGAAACACA+AGG | + | tig0018212:163846-163865 | None:intergenic | 35.0% | |
| ! | TACAGAAAGAAGTGCAAAGT+TGG | - | tig0018212:163854-163873 | Msa1365280:five_prime_UTR | 35.0% |
| TTCCTAGCAAATAGGTAACA+TGG | + | tig0018212:163907-163926 | None:intergenic | 35.0% | |
| GAGTGAATTTCCTAGCAAAT+AGG | + | tig0018212:163915-163934 | None:intergenic | 35.0% | |
| !! | AGTCCAAGGTGTTGAATAAT+TGG | + | tig0018212:163971-163990 | None:intergenic | 35.0% |
| AATCGATCAAACTAGCTGAA+GGG | + | tig0018212:164000-164019 | None:intergenic | 35.0% | |
| ! | AGCTAGTTTGATCGATTCTT+TGG | - | tig0018212:164003-164022 | Msa1365280:intron | 35.0% |
| !!! | GTCAGATAACTTGTTGCTTT+TGG | - | tig0018212:164025-164044 | Msa1365280:intron | 35.0% |
| CATATGAGAAACCAATATGG+AGG | + | tig0018212:164051-164070 | None:intergenic | 35.0% | |
| TGTAAATTGCAGCATTGTTG+AGG | - | tig0018212:164081-164100 | Msa1365280:intron | 35.0% | |
| GAAAGGAGGTTAACGATATA+AGG | - | tig0018212:164174-164193 | Msa1365280:intron | 35.0% | |
| ACTTCTGAATAGAGACAGTA+AGG | + | tig0018212:164362-164381 | None:intergenic | 35.0% | |
| CAAAAGGTAAGCAGCATATA+TGG | + | tig0018212:164419-164438 | None:intergenic | 35.0% | |
| ACGCATTCCAGGTACAAAAA+GGG | - | tig0018212:157516-157535 | Msa1365280:three_prime_UTR | 40.0% | |
| TGTACCCAAATACGGAAATG+GGG | - | tig0018212:157626-157645 | Msa1365280:three_prime_UTR | 40.0% | |
| GAAAACCCCATTTCCGTATT+TGG | + | tig0018212:157634-157653 | None:intergenic | 40.0% | |
| ! | AATACGGAAATGGGGTTTTC+TGG | - | tig0018212:157634-157653 | Msa1365280:three_prime_UTR | 40.0% |
| ! | ATACGGAAATGGGGTTTTCT+GGG | - | tig0018212:157635-157654 | Msa1365280:three_prime_UTR | 40.0% |
| GGACCGAAAAGAATTGTTTC+TGG | - | tig0018212:157942-157961 | Msa1365280:intron | 40.0% | |
| !! | CCGAAAAGAATTGTTTCTGG+AGG | - | tig0018212:157945-157964 | Msa1365280:intron | 40.0% |
| AGATGAAGTCGGACAAAGAT+TGG | - | tig0018212:157998-158017 | Msa1365280:intron | 40.0% | |
| !! | ATCCACATTGGCTTCTTCAT+GGG | + | tig0018212:158078-158097 | None:intergenic | 40.0% |
| !! | AATCCACATTGGCTTCTTCA+TGG | + | tig0018212:158079-158098 | None:intergenic | 40.0% |
| !!! | GATTTTTTCGAAACAACCGG+TGG | + | tig0018212:158300-158319 | None:intergenic | 40.0% |
| ! | CCATAATTTTTCCAGTGGGA+GGG | + | tig0018212:158355-158374 | None:intergenic | 40.0% |
| CCTCCCACTGGAAAAATTAT+GGG | - | tig0018212:158353-158372 | Msa1365280:intron | 40.0% | |
| !! | AGTATTAACTTGTTGGGACC+TGG | - | tig0018212:158634-158653 | Msa1365280:intron | 40.0% |
| !! | GTATTAACTTGTTGGGACCT+GGG | - | tig0018212:158635-158654 | Msa1365280:intron | 40.0% |
| GCTAAGGTTGCAACAATAAG+TGG | + | tig0018212:158722-158741 | None:intergenic | 40.0% | |
| GTACAAAGGATACTGTTGCA+TGG | - | tig0018212:158797-158816 | Msa1365280:intron | 40.0% | |
| TCCAACATGATTCCTGTTCT+TGG | - | tig0018212:158836-158855 | Msa1365280:intron | 40.0% | |
| TCCAAGAACAGGAATCATGT+TGG | + | tig0018212:158840-158859 | None:intergenic | 40.0% | |
| TCACAACTGTTTCCAAGAAC+AGG | + | tig0018212:158851-158870 | None:intergenic | 40.0% | |
| TGTGACAATGATGTTTACGG+TGG | - | tig0018212:158866-158885 | Msa1365280:intron | 40.0% | |
| ATGCACATTGCTAGATGAAC+AGG | + | tig0018212:159031-159050 | None:intergenic | 40.0% | |
| TCTAGCAATGTGCATTTACC+TGG | - | tig0018212:159036-159055 | Msa1365280:CDS | 40.0% | |
| ! | CACATGAACTGGTTTAGACT+TGG | + | tig0018212:159121-159140 | None:intergenic | 40.0% |
| TATCCCGGTTGACAAAGTAA+CGG | + | tig0018212:159146-159165 | None:intergenic | 40.0% | |
| TAGCCACATATGCAAACCAT+TGG | - | tig0018212:159260-159279 | Msa1365280:CDS | 40.0% | |
| ! | TCTCCAATGGTTTGCATATG+TGG | + | tig0018212:159266-159285 | None:intergenic | 40.0% |
| ! | TTTGGAGTTAAAACCCAGAC+TGG | + | tig0018212:159410-159429 | None:intergenic | 40.0% |
| GTACATCATCGTATTCAAGC+CGG | - | tig0018212:159563-159582 | Msa1365280:intron | 40.0% | |
| TACATCATCGTATTCAAGCC+GGG | - | tig0018212:159564-159583 | Msa1365280:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | - | tig0018212:159777-159796 | Msa1365280:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | + | tig0018212:159897-159916 | None:intergenic | 40.0% | |
| AGGAGAGTCAGGTTAAAAGA+GGG | - | tig0018212:159930-159949 | Msa1365280:intron | 40.0% | |
| !! | AACCAGTAGTTTTCTAGTGG+AGG | - | tig0018212:160165-160184 | Msa1365280:intron | 40.0% |
| AACCTCCACTAGAAAACTAC+TGG | + | tig0018212:160170-160189 | None:intergenic | 40.0% | |
| GGTGTGGGGTAAAATTTCTA+TGG | - | tig0018212:160221-160240 | Msa1365280:CDS | 40.0% | |
| CTGGTTATCAGGATCTTGAA+GGG | + | tig0018212:160277-160296 | None:intergenic | 40.0% | |
| AAGTCTTTCACCTCAACTTC+AGG | + | tig0018212:160667-160686 | None:intergenic | 40.0% | |
| TAGAATCTCGAAGTCATCGT+AGG | - | tig0018212:160930-160949 | Msa1365280:intron | 40.0% | |
| TTGAAAAGATTGTCCAGACC+AGG | - | tig0018212:160992-161011 | Msa1365280:intron | 40.0% | |
| TGAAAAGATTGTCCAGACCA+GGG | - | tig0018212:160993-161012 | Msa1365280:intron | 40.0% | |
| CCTCAGAGACAGTTGTATAA+TGG | + | tig0018212:161092-161111 | None:intergenic | 40.0% | |
| CCATTATACAACTGTCTCTG+AGG | - | tig0018212:161089-161108 | Msa1365280:CDS | 40.0% | |
| CTCAGTACCTTGAAGTTACA+AGG | - | tig0018212:161121-161140 | Msa1365280:CDS | 40.0% | |
| GTCTTTCACAGTATTCCAAC+TGG | - | tig0018212:161195-161214 | Msa1365280:intron | 40.0% | |
| GGAACTTCAGTTTATCCAGT+TGG | + | tig0018212:161213-161232 | None:intergenic | 40.0% | |
| ! | TGCAGTGGTTTTCTATGAAG+CGG | - | tig0018212:161512-161531 | Msa1365280:CDS | 40.0% |
| GCAGCATGCTGTTATAGTTA+TGG | - | tig0018212:161534-161553 | Msa1365280:CDS | 40.0% | |
| ATGTAACGAGTAACGACTAC+AGG | - | tig0018212:161942-161961 | Msa1365280:intron | 40.0% | |
| TATCTAGGTAATGATGCGCT+TGG | + | tig0018212:162046-162065 | None:intergenic | 40.0% | |
| CGCATCATTACCTAGATATC+AGG | - | tig0018212:162048-162067 | Msa1365280:intron | 40.0% | |
| !! | TGCCAGTTTTATGGCTTAGA+TGG | - | tig0018212:162250-162269 | Msa1365280:intron | 40.0% |
| TTGGATGGAAGTTCATCTCA+GGG | + | tig0018212:162324-162343 | None:intergenic | 40.0% | |
| TTTGGATGGAAGTTCATCTC+AGG | + | tig0018212:162325-162344 | None:intergenic | 40.0% | |
| TGAAATTCTCACCTGGAAGA+AGG | + | tig0018212:162527-162546 | None:intergenic | 40.0% | |
| TTGCAGTTGAAATTCTCACC+TGG | + | tig0018212:162534-162553 | None:intergenic | 40.0% | |
| ! | TTGACTGGTCCGAAAGAAAA+TGG | - | tig0018212:162668-162687 | Msa1365280:CDS | 40.0% |
| !! | ATTCCTTTTGGTTAGCAGCT+AGG | - | tig0018212:162790-162809 | Msa1365280:intron | 40.0% |
| TTTCCTAGCTGCTAACCAAA+AGG | + | tig0018212:162796-162815 | None:intergenic | 40.0% | |
| TAAATCTACTCCAGTGGTAC+CGG | + | tig0018212:162876-162895 | None:intergenic | 40.0% | |
| !! | CGAATGCGATTCTGGTTTAA+AGG | - | tig0018212:162941-162960 | Msa1365280:intron | 40.0% |
| CTTTATGGGACAGTTAGTGT+GGG | - | tig0018212:162979-162998 | Msa1365280:intron | 40.0% | |
| GGAGGAATCAAAAGTGAAGA+TGG | + | tig0018212:163110-163129 | None:intergenic | 40.0% | |
| !! | AAAAGAGACATCAAGTTGGG+GGG | - | tig0018212:163567-163586 | Msa1365280:CDS | 40.0% |
| GACGTGTACACTAACATCAA+CGG | + | tig0018212:163747-163766 | None:intergenic | 40.0% | |
| ATAGCATACCTTCTCATCAC+TGG | + | tig0018212:163771-163790 | None:intergenic | 40.0% | |
| AGCCATGTTACCTATTTGCT+AGG | - | tig0018212:163902-163921 | Msa1365280:intron | 40.0% | |
| GAAATTCACTCCTGAAACAC+TGG | - | tig0018212:163924-163943 | Msa1365280:intron | 40.0% | |
| AACAACTTGTCCAGTGTTTC+AGG | + | tig0018212:163937-163956 | None:intergenic | 40.0% | |
| ATCGATCAAACTAGCTGAAG+GGG | + | tig0018212:163999-164018 | None:intergenic | 40.0% | |
| GAATCGATCAAACTAGCTGA+AGG | + | tig0018212:164001-164020 | None:intergenic | 40.0% | |
| TACCTTGCACCCAAAATATG+CGG | + | tig0018212:164123-164142 | None:intergenic | 40.0% | |
| !! | ATTTTGGGTGCAAGGTAAAC+TGG | - | tig0018212:164126-164145 | Msa1365280:intron | 40.0% |
| AAGGTAAACTGGCATTGCTA+GGG | - | tig0018212:164137-164156 | Msa1365280:intron | 40.0% | |
| TAACCTCCTTTCAATGTCTC+AGG | + | tig0018212:164166-164185 | None:intergenic | 40.0% | |
| ACGATATAAGGTTGCTTCCT+CGG | - | tig0018212:164186-164205 | Msa1365280:intron | 40.0% | |
| GAATGCGTCGAAAGATGTTG+AGG | + | tig0018212:157504-157523 | None:intergenic | 45.0% | |
| AACATCTTTCGACGCATTCC+AGG | - | tig0018212:157505-157524 | Msa1365280:three_prime_UTR | 45.0% | |
| GACGCATTCCAGGTACAAAA+AGG | - | tig0018212:157515-157534 | Msa1365280:three_prime_UTR | 45.0% | |
| TCGGACAAAGATTGGCGTTT+AGG | - | tig0018212:158006-158025 | Msa1365280:CDS | 45.0% | |
| AGATTGGCGTTTAGGAAGCA+TGG | - | tig0018212:158014-158033 | Msa1365280:CDS | 45.0% | |
| ! | GATTGGCGTTTAGGAAGCAT+GGG | - | tig0018212:158015-158034 | Msa1365280:CDS | 45.0% |
| GGTGATATGCAGATATTGCC+CGG | - | tig0018212:158036-158055 | Msa1365280:intron | 45.0% | |
| GTGATATGCAGATATTGCCC+GGG | - | tig0018212:158037-158056 | Msa1365280:intron | 45.0% | |
| CTGAAGAACTGCTTTGTGGA+GGG | + | tig0018212:158152-158171 | None:intergenic | 45.0% | |
| TCATCGGTGTATTCTCTTGC+AGG | + | tig0018212:158234-158253 | None:intergenic | 45.0% | |
| ACGCGATGCAATCTCTTCAT+CGG | + | tig0018212:158250-158269 | None:intergenic | 45.0% | |
| TGCATCGCGTGTTGTGATTA+AGG | - | tig0018212:158260-158279 | Msa1365280:intron | 45.0% | |
| !!! | GGATATTTTGACCTCACCAC+CGG | - | tig0018212:158281-158300 | Msa1365280:intron | 45.0% |
| !! | GCTTTCATGTTTTTGTCGCC+TGG | - | tig0018212:158327-158346 | Msa1365280:intron | 45.0% |
| CCCTCCCACTGGAAAAATTA+TGG | - | tig0018212:158352-158371 | Msa1365280:intron | 45.0% | |
| ! | CCCATAATTTTTCCAGTGGG+AGG | + | tig0018212:158356-158375 | None:intergenic | 45.0% |
| ! | CAGTTATCGCCTTATCGGTT+TGG | - | tig0018212:158444-158463 | Msa1365280:intron | 45.0% |
| TGAAATTCCCAAAGTCTCCC+AGG | + | tig0018212:158655-158674 | None:intergenic | 45.0% | |
| CTTTATGGCAGGGTCATGAA+GGG | - | tig0018212:159070-159089 | Msa1365280:CDS | 45.0% | |
| AAGTAACGGCTCACATGAAC+TGG | + | tig0018212:159132-159151 | None:intergenic | 45.0% | |
| ! | TGAGCCGTTACTTTGTCAAC+CGG | - | tig0018212:159139-159158 | Msa1365280:intron | 45.0% |
| !! | CAAAACAAGGGCATCTCCAA+TGG | + | tig0018212:159279-159298 | None:intergenic | 45.0% |
| !!! | GAGATGCCCTTGTTTTGCTT+TGG | - | tig0018212:159282-159301 | Msa1365280:CDS | 45.0% |
| ACTTCTCCATTTCAACCACC+CGG | + | tig0018212:159585-159604 | None:intergenic | 45.0% | |
| !! | TTGAAATGGAGAAGTGCCTC+AGG | - | tig0018212:159590-159609 | Msa1365280:intron | 45.0% |
| CTTATCGCACAAAACACCTG+AGG | + | tig0018212:159609-159628 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | tig0018212:159676-159695 | Msa1365280:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | tig0018212:159680-159699 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | tig0018212:159684-159703 | Msa1365280:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | tig0018212:159685-159704 | Msa1365280:intron | 45.0% |
| CGCTTACTTTACTCTCGTGT+TGG | + | tig0018212:159721-159740 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | tig0018212:159724-159743 | Msa1365280:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | - | tig0018212:159766-159785 | Msa1365280:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | - | tig0018212:159771-159790 | Msa1365280:intron | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | - | tig0018212:159802-159821 | Msa1365280:intron | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | - | tig0018212:159803-159822 | Msa1365280:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | - | tig0018212:159804-159823 | Msa1365280:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | + | tig0018212:159896-159915 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | tig0018212:159919-159938 | Msa1365280:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | tig0018212:159929-159948 | Msa1365280:intron | 45.0% | |
| AGTCAGGTTAAAAGAGGGTG+AGG | - | tig0018212:159935-159954 | Msa1365280:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0018212:160075-160094 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0018212:160076-160095 | None:intergenic | 45.0% |
| ACCTGCAAACGACATGACTA+CGG | + | tig0018212:160201-160220 | None:intergenic | 45.0% | |
| ! | CTATGGTTGATGCAGAGAGA+CGG | - | tig0018212:160238-160257 | Msa1365280:CDS | 45.0% |
| TGATGCAGAGAGACGGATAT+TGG | - | tig0018212:160245-160264 | Msa1365280:CDS | 45.0% | |
| GCTGGTTATCAGGATCTTGA+AGG | + | tig0018212:160278-160297 | None:intergenic | 45.0% | |
| TCGCATGTTACCTGAAGTTG+AGG | - | tig0018212:160654-160673 | Msa1365280:intron | 45.0% | |
| ! | AGACTTTAGAAAGGGTGCAC+AGG | - | tig0018212:160681-160700 | Msa1365280:intron | 45.0% |
| AAAATGTTGCAACCCTGGTC+TGG | + | tig0018212:161008-161027 | None:intergenic | 45.0% | |
| AAAATTTCGGGCTTACTGCC+AGG | - | tig0018212:161576-161595 | Msa1365280:intron | 45.0% | |
| GCAACATCGACCTGATATCT+AGG | + | tig0018212:162061-162080 | None:intergenic | 45.0% | |
| ATATCAGGTCGATGTTGCGT+AGG | - | tig0018212:162063-162082 | Msa1365280:intron | 45.0% | |
| AGAGTTCCTTGCAACGATTC+AGG | - | tig0018212:162119-162138 | Msa1365280:intron | 45.0% | |
| AGAAGTCCTGAATCGTTGCA+AGG | + | tig0018212:162128-162147 | None:intergenic | 45.0% | |
| CTTAATACCACAGCCTGGTT+TGG | - | tig0018212:162462-162481 | Msa1365280:intron | 45.0% | |
| TTACTTGCCAACCTTCTTCC+AGG | - | tig0018212:162513-162532 | Msa1365280:intron | 45.0% | |
| ATTCTCACCTGGAAGAAGGT+TGG | + | tig0018212:162523-162542 | None:intergenic | 45.0% | |
| ATCCTGGTGGAATTGCAAAC+TGG | - | tig0018212:162632-162651 | Msa1365280:CDS | 45.0% | |
| TCTTTCGGACCAGTCAACAT+GGG | + | tig0018212:162665-162684 | None:intergenic | 45.0% | |
| TTCTTTCGGACCAGTCAACA+TGG | + | tig0018212:162666-162685 | None:intergenic | 45.0% | |
| ! | TAGAAACACAAGTCTGGGAC+CGG | - | tig0018212:162854-162873 | Msa1365280:intron | 45.0% |
| GCTTTATGGGACAGTTAGTG+TGG | - | tig0018212:162978-162997 | Msa1365280:intron | 45.0% | |
| !! | AAAGAGACATCAAGTTGGGG+GGG | - | tig0018212:163568-163587 | Msa1365280:CDS | 45.0% |
| TGAATCCCATTCCACAAGCA+AGG | + | tig0018212:163880-163899 | None:intergenic | 45.0% | |
| !!! | GTTGCTTTTGGCCTCCATAT+TGG | - | tig0018212:164037-164056 | Msa1365280:intron | 45.0% |
| CAAGGTAAACTGGCATTGCT+AGG | - | tig0018212:164136-164155 | Msa1365280:intron | 45.0% | |
| CGATATAAGGTTGCTTCCTC+GGG | - | tig0018212:164187-164206 | Msa1365280:intron | 45.0% | |
| GATATAAGGTTGCTTCCTCG+GGG | - | tig0018212:164188-164207 | Msa1365280:intron | 45.0% | |
| !! | AAAAAAAAAAAAATTGAAAT+TGG | + | tig0018212:157675-157694 | None:intergenic | 5.0% |
| !!! | TCAATTTTTTTAAAAAAAAT+TGG | - | tig0018212:161027-161046 | Msa1365280:intron | 5.0% |
| !!! | CAATTTTTTTAAAAAAAATT+GGG | - | tig0018212:161028-161047 | Msa1365280:intron | 5.0% |
| !!! | AATTTTTTTAAAAAAAATTG+GGG | - | tig0018212:161029-161048 | Msa1365280:intron | 5.0% |
| !!! | AATATGAATTTTTATATTTT+TGG | - | tig0018212:163245-163264 | Msa1365280:intron | 5.0% |
| TTGGCTTCTTCATGGGAGGA+CGG | + | tig0018212:158071-158090 | None:intergenic | 50.0% | |
| !! | CACATTGGCTTCTTCATGGG+AGG | + | tig0018212:158075-158094 | None:intergenic | 50.0% |
| CTCCCATGAAGAAGCCAATG+TGG | - | tig0018212:158073-158092 | Msa1365280:intron | 50.0% | |
| GCTGAAGAACTGCTTTGTGG+AGG | + | tig0018212:158153-158172 | None:intergenic | 50.0% | |
| CAGGCTGAAGAACTGCTTTG+TGG | + | tig0018212:158156-158175 | None:intergenic | 50.0% | |
| ! | TCTCTTCTAGAGGGTGCAAG+CGG | - | tig0018212:158184-158203 | Msa1365280:intron | 50.0% |
| ! | GGTGCAAGCGGTTTTCTGAT+TGG | - | tig0018212:158196-158215 | Msa1365280:intron | 50.0% |
| TATTCTCTTGCAGGAGCAGG+TGG | + | tig0018212:158225-158244 | None:intergenic | 50.0% | |
| GTGTATTCTCTTGCAGGAGC+AGG | + | tig0018212:158228-158247 | None:intergenic | 50.0% | |
| TTTCGAAACAACCGGTGGTG+AGG | + | tig0018212:158295-158314 | None:intergenic | 50.0% | |
| CCTTCATGACCCTGCCATAA+AGG | + | tig0018212:159072-159091 | None:intergenic | 50.0% | |
| CCTTTATGGCAGGGTCATGA+AGG | - | tig0018212:159069-159088 | Msa1365280:CDS | 50.0% | |
| ! | GAGCCGTTACTTTGTCAACC+GGG | - | tig0018212:159140-159159 | Msa1365280:intron | 50.0% |
| TAACCTCATCTGGTCCAGTC+TGG | - | tig0018212:159393-159412 | Msa1365280:intron | 50.0% | |
| AACCTCATCTGGTCCAGTCT+GGG | - | tig0018212:159394-159413 | Msa1365280:intron | 50.0% | |
| ATCATCGTATTCAAGCCGGG+TGG | - | tig0018212:159567-159586 | Msa1365280:intron | 50.0% | |
| TTCAAGCCGGGTGGTTGAAA+TGG | - | tig0018212:159576-159595 | Msa1365280:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | tig0018212:159671-159690 | Msa1365280:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | tig0018212:159732-159751 | Msa1365280:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | - | tig0018212:159752-159771 | Msa1365280:intron | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | - | tig0018212:159805-159824 | Msa1365280:intron | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | + | tig0018212:159810-159829 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | tig0018212:160071-160090 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0018212:160077-160096 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | tig0018212:160074-160093 | Msa1365280:intron | 50.0% | |
| CCTGCAAACGACATGACTAC+GGG | + | tig0018212:160200-160219 | None:intergenic | 50.0% | |
| ! | GTAGTCATGTCGTTTGCAGG+TGG | - | tig0018212:160200-160219 | Msa1365280:CDS | 50.0% |
| ! | ATGTCGTTTGCAGGTGGTGT+GGG | - | tig0018212:160206-160225 | Msa1365280:CDS | 50.0% |
| TTTAAGGATCCTGGTCCGCA+TGG | - | tig0018212:160613-160632 | Msa1365280:intron | 50.0% | |
| TTAAGGATCCTGGTCCGCAT+GGG | - | tig0018212:160614-160633 | Msa1365280:intron | 50.0% | |
| TCTCCAACATGGCTTCAGCA+TGG | + | tig0018212:160712-160731 | None:intergenic | 50.0% | |
| !! | AATACCACAGCCTGGTTTGG+AGG | - | tig0018212:162465-162484 | Msa1365280:intron | 50.0% |
| !! | ATACCACAGCCTGGTTTGGA+GGG | - | tig0018212:162466-162485 | Msa1365280:intron | 50.0% |
| CAATTCTTCCCCTCCAAACC+AGG | + | tig0018212:162478-162497 | None:intergenic | 50.0% | |
| GACCAGTTTGCAATTCCACC+AGG | + | tig0018212:162637-162656 | None:intergenic | 50.0% | |
| GGTCAGTAACCCATGTTGAC+TGG | - | tig0018212:162653-162672 | Msa1365280:CDS | 50.0% | |
| AGCTGAAGCGAATGCGATTC+TGG | - | tig0018212:162933-162952 | Msa1365280:intron | 50.0% | |
| ACACGTCACCAGTGATGAGA+AGG | - | tig0018212:163760-163779 | Msa1365280:CDS | 50.0% | |
| !! | TGCAAAGTTGGCCTTGCTTG+TGG | - | tig0018212:163866-163885 | Msa1365280:intron | 50.0% |
| !! | AGTTGGCCTTGCTTGTGGAA+TGG | - | tig0018212:163871-163890 | Msa1365280:intron | 50.0% |
| !! | GTTGGCCTTGCTTGTGGAAT+GGG | - | tig0018212:163872-163891 | Msa1365280:intron | 50.0% |
| CTGAAGGGGATTCAAGTCCA+AGG | + | tig0018212:163985-164004 | None:intergenic | 50.0% | |
| TTGCACCCAAAATATGCGGC+CGG | + | tig0018212:164119-164138 | None:intergenic | 50.0% | |
| GTAAACTGGCATTGCTAGGG+TGG | - | tig0018212:164140-164159 | Msa1365280:intron | 50.0% | |
| TGGCCTGAGACATTGAAAGG+AGG | - | tig0018212:164160-164179 | Msa1365280:intron | 50.0% | |
| TGCAGATATTGCCCGGGTCT+CGG | - | tig0018212:158043-158062 | Msa1365280:intron | 55.0% | |
| ! | TTTTCCAGTGGGAGGGAACC+AGG | + | tig0018212:158348-158367 | None:intergenic | 55.0% |
| TGTTGGGACCTGGGAGACTT+TGG | - | tig0018212:158644-158663 | Msa1365280:intron | 55.0% | |
| GTTGGGACCTGGGAGACTTT+GGG | - | tig0018212:158645-158664 | Msa1365280:intron | 55.0% | |
| GTCAACCGGGATATACGCAG+TGG | - | tig0018212:159153-159172 | Msa1365280:intron | 55.0% | |
| AACCCAGACTGGACCAGATG+AGG | + | tig0018212:159399-159418 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | tig0018212:159658-159677 | Msa1365280:intron | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | tig0018212:159688-159707 | Msa1365280:intron | 55.0% |
| CGGAGATGAGGATGTTGCGT+TGG | - | tig0018212:159744-159763 | Msa1365280:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | tig0018212:160063-160082 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | tig0018212:160062-160081 | Msa1365280:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | tig0018212:160063-160082 | Msa1365280:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | tig0018212:160069-160088 | Msa1365280:intron | 55.0% | |
| ! | CCCGTAGTCATGTCGTTTGC+AGG | - | tig0018212:160197-160216 | Msa1365280:CDS | 55.0% |
| ! | CATGTCGTTTGCAGGTGGTG+TGG | - | tig0018212:160205-160224 | Msa1365280:CDS | 55.0% |
| ! | TGTCGTTTGCAGGTGGTGTG+GGG | - | tig0018212:160207-160226 | Msa1365280:CDS | 55.0% |
| ATCCTGGTCCGCATGGGAAT+GGG | - | tig0018212:160620-160639 | Msa1365280:intron | 55.0% | |
| GAGTACCTCCCATTCCCATG+CGG | + | tig0018212:160631-160650 | None:intergenic | 55.0% | |
| CGTCCATGCTGAAGCCATGT+TGG | - | tig0018212:160706-160725 | Msa1365280:intron | 55.0% | |
| ! | CACTTGAGGTGCTAGCTCAG+TGG | + | tig0018212:161158-161177 | None:intergenic | 55.0% |
| !! | TACCACAGCCTGGTTTGGAG+GGG | - | tig0018212:162467-162486 | Msa1365280:intron | 55.0% |
| GGACAGTTAGTGTGGGACTC+TGG | - | tig0018212:162986-163005 | Msa1365280:intron | 55.0% | |
| !! | GGCCGCATATTTTGGGTGCA+AGG | - | tig0018212:164118-164137 | Msa1365280:intron | 55.0% |
| GGGTGGCCTGAGACATTGAA+AGG | - | tig0018212:164157-164176 | Msa1365280:intron | 55.0% | |
| GTTGCTTCCTCGGGGATTGT+TGG | - | tig0018212:164196-164215 | Msa1365280:intron | 55.0% | |
| CAGTCATCCAACAATCCCCG+AGG | + | tig0018212:164206-164225 | None:intergenic | 55.0% | |
| CCTGGCCACTGCGTATATCC+CGG | + | tig0018212:159161-159180 | None:intergenic | 60.0% | |
| GATCCTGGTCCGCATGGGAA+TGG | - | tig0018212:160619-160638 | Msa1365280:intron | 60.0% | |
| TTCCCCTCCAAACCAGGCTG+TGG | + | tig0018212:162472-162491 | None:intergenic | 60.0% | |
| ! | AAGTCTGGGACCGGTACCAC+TGG | - | tig0018212:162863-162882 | Msa1365280:intron | 60.0% |
| GTTGAGGCTTGATCGCCTGC+CGG | - | tig0018212:164097-164116 | Msa1365280:intron | 60.0% | |
| ! | GCCTGCCGGCCGCATATTTT+GGG | - | tig0018212:164111-164130 | Msa1365280:intron | 60.0% |
| ACCCAAAATATGCGGCCGGC+AGG | + | tig0018212:164115-164134 | None:intergenic | 60.0% | |
| CCGGGATATACGCAGTGGCC+AGG | - | tig0018212:159158-159177 | Msa1365280:intron | 65.0% | |
| CTCCCATTCCCATGCGGACC+AGG | + | tig0018212:160625-160644 | None:intergenic | 65.0% | |
| CTGGTCCGCATGGGAATGGG+AGG | - | tig0018212:160623-160642 | Msa1365280:intron | 65.0% | |
| ! | CGCCTGCCGGCCGCATATTT+TGG | - | tig0018212:164110-164129 | Msa1365280:intron | 65.0% |
| GTCGCCTGGTTCCCTCCCAC+TGG | - | tig0018212:158341-158360 | Msa1365280:intron | 70.0% | |
| ! | GGAGGACGGTGCCGAGACCC+GGG | + | tig0018212:158057-158076 | None:intergenic | 75.0% |
| ! | GGGAGGACGGTGCCGAGACC+CGG | + | tig0018212:158058-158077 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018212 | gene | 157311 | 164471 | 157311 | ID=Msa1365280;Name=Msa1365280 |
| tig0018212 | mRNA | 157311 | 164471 | 157311 | ID=Msa1365280-mRNA-1;Parent=Msa1365280;Name=Msa1365280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=317|1|1|1|0.9|0.81|11|478|396 |
| tig0018212 | exon | 157311 | 157923 | 157311 | ID=Msa1365280-mRNA-1:exon:14496;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 158001 | 158039 | 158001 | ID=Msa1365280-mRNA-1:exon:14495;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 159035 | 159157 | 159035 | ID=Msa1365280-mRNA-1:exon:14494;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 159248 | 159307 | 159248 | ID=Msa1365280-mRNA-1:exon:14493;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 160185 | 160265 | 160185 | ID=Msa1365280-mRNA-1:exon:14492;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 161080 | 161170 | 161080 | ID=Msa1365280-mRNA-1:exon:14491;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 161295 | 161366 | 161295 | ID=Msa1365280-mRNA-1:exon:14490;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 161463 | 161563 | 161463 | ID=Msa1365280-mRNA-1:exon:14489;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 162603 | 162701 | 162603 | ID=Msa1365280-mRNA-1:exon:14488;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 163393 | 163883 | 163393 | ID=Msa1365280-mRNA-1:exon:14487;Parent=Msa1365280-mRNA-1 |
| tig0018212 | exon | 164256 | 164471 | 164256 | ID=Msa1365280-mRNA-1:exon:14486;Parent=Msa1365280-mRNA-1 |
| tig0018212 | five_prime_UTR | 164256 | 164471 | 164256 | ID=Msa1365280-mRNA-1:five_prime_utr;Parent=Msa1365280-mRNA-1 |
| tig0018212 | five_prime_UTR | 163783 | 163883 | 163783 | ID=Msa1365280-mRNA-1:five_prime_utr;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 163393 | 163782 | 163393 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 162603 | 162701 | 162603 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 161463 | 161563 | 161463 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 161295 | 161366 | 161295 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 161080 | 161170 | 161080 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 160185 | 160265 | 160185 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 159248 | 159307 | 159248 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 159035 | 159157 | 159035 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 158001 | 158039 | 158001 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | CDS | 157789 | 157923 | 157789 | ID=Msa1365280-mRNA-1:cds;Parent=Msa1365280-mRNA-1 |
| tig0018212 | three_prime_UTR | 157311 | 157788 | 157311 | ID=Msa1365280-mRNA-1:three_prime_utr;Parent=Msa1365280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
