Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373060 | KAF4393010.1 | 62.081 | 567 | 155 | 8 | 1 | 511 | 29 | 591 | 0.0 | 657 |
| Msa1373060 | KAF4393010.1 | 66.538 | 260 | 82 | 3 | 226 | 481 | 14 | 272 | 3.48e-108 | 344 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373060 | sp|P51614|CHIT3_VITVI | 70.103 | 291 | 81 | 4 | 215 | 500 | 1 | 290 | 1.94e-140 | 409 |
| Msa1373060 | sp|P51614|CHIT3_VITVI | 64.032 | 253 | 53 | 4 | 1 | 215 | 28 | 280 | 2.88e-104 | 317 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373060 | A0A7J6HF62 | 62.081 | 567 | 155 | 8 | 1 | 511 | 29 | 591 | 0.0 | 657 |
| Msa1373060 | A0A7J6HF62 | 66.538 | 260 | 82 | 3 | 226 | 481 | 14 | 272 | 1.66e-108 | 344 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0086360 | Msa1373060 | 0.866894 | 2.041148e-65 | -8.615850e-47 |
| Msa0746340 | Msa1373060 | 0.808233 | 3.425668e-50 | -8.615850e-47 |
| Msa0181790 | Msa1373060 | 0.878198 | 3.408235e-69 | -8.615850e-47 |
| Msa0393100 | Msa1373060 | 0.817543 | 3.122247e-52 | -8.615850e-47 |
| Msa0425620 | Msa1373060 | 0.808859 | 2.517617e-50 | -8.615850e-47 |
| Msa1027400 | Msa1373060 | 0.800261 | 1.566065e-48 | -8.615850e-47 |
| Msa1154570 | Msa1373060 | 0.800062 | 1.718902e-48 | -8.615850e-47 |
| Msa1224510 | Msa1373060 | 0.800839 | 1.193733e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373060 | MtrunA17_Chr1g0202261 | 97.306 | 297 | 8 | 0 | 215 | 511 | 1 | 297 | 0.0 | 593 |
| Msa1373060 | MtrunA17_Chr1g0202261 | 67.600 | 250 | 46 | 4 | 1 | 215 | 27 | 276 | 1.77e-107 | 322 |
| Msa1373060 | MtrunA17_Chr1g0202281 | 69.132 | 311 | 85 | 5 | 205 | 511 | 7 | 310 | 5.02e-147 | 423 |
| Msa1373060 | MtrunA17_Chr1g0202281 | 58.130 | 246 | 72 | 4 | 1 | 215 | 44 | 289 | 6.24e-91 | 280 |
| Msa1373060 | MtrunA17_Chr7g0240891 | 67.007 | 294 | 91 | 4 | 219 | 511 | 10 | 298 | 6.29e-136 | 395 |
| Msa1373060 | MtrunA17_Chr7g0240891 | 62.903 | 248 | 59 | 4 | 1 | 215 | 30 | 277 | 5.96e-100 | 303 |
| Msa1373060 | MtrunA17_Chr1g0202241 | 65.188 | 293 | 96 | 6 | 221 | 511 | 8 | 296 | 2.90e-130 | 380 |
| Msa1373060 | MtrunA17_Chr1g0202241 | 75.502 | 249 | 26 | 5 | 1 | 215 | 28 | 275 | 2.37e-121 | 357 |
| Msa1373060 | MtrunA17_Chr5g0418461 | 63.423 | 298 | 104 | 3 | 215 | 511 | 1 | 294 | 1.19e-129 | 379 |
| Msa1373060 | MtrunA17_Chr5g0418461 | 61.134 | 247 | 64 | 4 | 1 | 215 | 27 | 273 | 8.50e-95 | 290 |
| Msa1373060 | MtrunA17_Chr1g0202231 | 61.856 | 291 | 106 | 5 | 221 | 509 | 9 | 296 | 1.46e-122 | 362 |
| Msa1373060 | MtrunA17_Chr1g0202231 | 68.548 | 248 | 42 | 6 | 3 | 215 | 31 | 277 | 5.91e-107 | 322 |
| Msa1373060 | MtrunA17_Chr8g0361941 | 62.284 | 289 | 105 | 3 | 221 | 507 | 8 | 294 | 1.06e-119 | 353 |
| Msa1373060 | MtrunA17_Chr8g0361941 | 57.600 | 250 | 71 | 5 | 1 | 215 | 28 | 277 | 1.21e-85 | 266 |
| Msa1373060 | MtrunA17_Chr7g0274861 | 60.417 | 288 | 89 | 2 | 221 | 507 | 8 | 271 | 9.35e-119 | 350 |
| Msa1373060 | MtrunA17_Chr7g0274861 | 53.846 | 247 | 62 | 4 | 1 | 215 | 28 | 254 | 4.84e-80 | 251 |
| Msa1373060 | MtrunA17_Chr2g0331781 | 57.667 | 300 | 116 | 5 | 222 | 511 | 15 | 313 | 1.68e-116 | 347 |
| Msa1373060 | MtrunA17_Chr2g0331781 | 49.612 | 258 | 87 | 5 | 1 | 215 | 35 | 292 | 3.97e-81 | 256 |
| Msa1373060 | MtrunA17_Chr7g0275231 | 56.701 | 291 | 121 | 4 | 225 | 511 | 14 | 303 | 1.60e-110 | 330 |
| Msa1373060 | MtrunA17_Chr7g0275231 | 51.779 | 253 | 84 | 6 | 1 | 215 | 30 | 282 | 1.05e-77 | 246 |
| Msa1373060 | MtrunA17_Chr2g0300101 | 55.634 | 284 | 118 | 4 | 228 | 507 | 16 | 295 | 5.62e-101 | 306 |
| Msa1373060 | MtrunA17_Chr2g0300101 | 50.198 | 253 | 85 | 7 | 1 | 215 | 29 | 278 | 6.08e-68 | 221 |
| Msa1373060 | MtrunA17_Chr2g0300141 | 53.684 | 285 | 123 | 5 | 228 | 507 | 16 | 296 | 1.17e-94 | 290 |
| Msa1373060 | MtrunA17_Chr2g0300141 | 50.000 | 254 | 85 | 8 | 1 | 215 | 29 | 279 | 1.52e-65 | 215 |
| Msa1373060 | MtrunA17_Chr2g0300081 | 52.982 | 285 | 125 | 5 | 228 | 507 | 18 | 298 | 3.23e-94 | 289 |
| Msa1373060 | MtrunA17_Chr2g0300081 | 49.606 | 254 | 86 | 8 | 1 | 215 | 31 | 281 | 2.68e-65 | 214 |
| Msa1373060 | MtrunA17_Chr2g0300051 | 48.421 | 285 | 134 | 6 | 228 | 507 | 16 | 292 | 1.50e-82 | 259 |
| Msa1373060 | MtrunA17_Chr2g0300051 | 43.874 | 253 | 100 | 7 | 1 | 216 | 29 | 276 | 9.09e-56 | 189 |
| Msa1373060 | MtrunA17_Chr2g0300181 | 43.434 | 297 | 151 | 10 | 223 | 507 | 8 | 299 | 1.51e-70 | 228 |
| Msa1373060 | MtrunA17_Chr2g0300181 | 41.085 | 258 | 107 | 10 | 1 | 216 | 29 | 283 | 5.89e-44 | 158 |
| Msa1373060 | MtrunA17_Chr6g0459141 | 42.081 | 221 | 83 | 8 | 1 | 215 | 29 | 210 | 1.55e-43 | 154 |
| Msa1373060 | MtrunA17_Chr6g0459141 | 36.201 | 279 | 106 | 10 | 235 | 511 | 23 | 231 | 1.22e-42 | 151 |
| Msa1373060 | MtrunA17_Chr2g0300161 | 49.057 | 159 | 77 | 2 | 230 | 388 | 19 | 173 | 3.24e-39 | 140 |
| Msa1373060 | MtrunA17_Chr2g0300161 | 50.704 | 142 | 63 | 4 | 1 | 138 | 30 | 168 | 6.49e-34 | 126 |
| Msa1373060 | MtrunA17_Chr2g0300171 | 52.212 | 113 | 49 | 3 | 400 | 507 | 1 | 113 | 8.53e-34 | 125 |
| Msa1373060 | MtrunA17_Chr2g0300171 | 52.632 | 95 | 39 | 4 | 126 | 215 | 3 | 96 | 9.86e-23 | 94.4 |
| Msa1373060 | MtrunA17_Chr2g0300151 | 45.752 | 153 | 73 | 3 | 216 | 361 | 3 | 152 | 1.25e-32 | 122 |
| Msa1373060 | MtrunA17_Chr2g0300151 | 48.387 | 124 | 57 | 2 | 1 | 117 | 29 | 152 | 1.17e-29 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373060 | AT5G24090.1 | 64.000 | 300 | 104 | 3 | 215 | 511 | 4 | 302 | 6.89e-140 | 405 |
| Msa1373060 | AT5G24090.1 | 58.800 | 250 | 68 | 4 | 1 | 215 | 32 | 281 | 3.77e-97 | 296 |
Find 110 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTTTGATTCCTTTATTT+TGG | 0.131017 | tig0019346:+1915 | Msa1373060:intergenic |
| AGGAACCTTCATTTCCATTT+TGG | 0.201244 | tig0019346:+9430 | Msa1373060:intergenic |
| TTGTGAATTCATGGAATAAA+TGG | 0.242224 | tig0019346:-1526 | Msa1373060:CDS |
| TTGTGAATTCATGGAATAAA+TGG | 0.242224 | tig0019346:-4655 | Msa1373060:CDS |
| AACTTGGTTCCACCGAAAAT+TGG | 0.244758 | tig0019346:-1736 | Msa1373060:CDS |
| GACCTTGCAAGAGCACTTAA+TGG | 0.258905 | tig0019346:-9051 | Msa1373060:intron |
| CTTTCAATTGGTGGTGGAAT+TGG | 0.287500 | tig0019346:-1890 | Msa1373060:CDS |
| AGGTTCCTTCGTTGCCATTT+TGG | 0.290608 | tig0019346:+2095 | None:intergenic |
| TGCAGGAATTGCTGTCTATT+GGG | 0.293692 | tig0019346:-9454 | None:intergenic |
| CTGCAGGAATTGCTGTCTAT+TGG | 0.299764 | tig0019346:-9455 | None:intergenic |
| GCAATCTATTGGGGCCAAAA+TGG | 0.300822 | tig0019346:-2109 | Msa1373060:CDS |
| TTACCTATGGAACAATTTCT+TGG | 0.301794 | tig0019346:-9160 | Msa1373060:CDS |
| GGGTATAGCACTTCTATTAT+TGG | 0.304491 | tig0019346:-1329 | Msa1373060:CDS |
| TGACCTGCGAGATTCATTTC+AGG | 0.305610 | tig0019346:+1995 | Msa1373060:intergenic |
| ACCATTAGGTGATGCTGTTT+TGG | 0.309129 | tig0019346:-9118 | Msa1373060:CDS |
| TAACTAACCTTGTGAATTCA+TGG | 0.311751 | tig0019346:-1535 | Msa1373060:CDS |
| TAACTAACCTTGTGAATTCA+TGG | 0.311751 | tig0019346:-4664 | Msa1373060:CDS |
| CTTAAAGGGTATAGTAGATA+TGG | 0.312136 | tig0019346:-1695 | Msa1373060:CDS |
| AATCCACCTTGTCAATATAA+TGG | 0.323098 | tig0019346:-1563 | Msa1373060:CDS |
| AATCCACCTTGTCAATATAA+TGG | 0.323098 | tig0019346:-4692 | Msa1373060:CDS |
| CTGGTGGCATAGCAATCTAT+TGG | 0.352724 | tig0019346:-2120 | Msa1373060:CDS |
| CTCTCTCTCGGAGGTGGTGC+CGG | 0.355247 | tig0019346:-9228 | Msa1373060:CDS |
| ATCAAAGATTGCCAAAATAA+AGG | 0.357615 | tig0019346:-1926 | Msa1373060:CDS |
| GACCGTTACCGAATTTGTTT+AGG | 0.359199 | tig0019346:+2023 | Msa1373060:intergenic |
| TTGGGCACTGCACTTGAAAC+AGG | 0.362436 | tig0019346:-1620 | Msa1373060:CDS |
| GGCCAGCAAGGTTTAGAGTT+GGG | 0.367643 | tig0019346:+9331 | Msa1373060:intergenic |
| AAACTTTGTGCAACCGTTTG+AGG | 0.377387 | tig0019346:+9296 | Msa1373060:intergenic |
| TGGTGGCATAGCAATCTATT+GGG | 0.384033 | tig0019346:-2119 | Msa1373060:CDS |
| GAAAATTGGCAACACCTTGC+AGG | 0.393402 | tig0019346:-1722 | Msa1373060:CDS |
| ACCCCAACTCTAAACCTTGC+TGG | 0.394335 | tig0019346:-9333 | Msa1373060:CDS |
| CAAGGTTTAGAGTTGGGGTT+TGG | 0.398633 | tig0019346:+9337 | Msa1373060:intergenic |
| GCTGTCTATTGGGGCCAAAA+TGG | 0.403140 | tig0019346:-9444 | Msa1373060:CDS |
| ATAGCTTTCCTAAACAAATT+CGG | 0.403876 | tig0019346:-2031 | Msa1373060:CDS |
| TGCCGGAATAAAACCACTTC+CGG | 0.411953 | tig0019346:+1445 | Msa1373060:intergenic |
| TGCCGGAATAAAACCACTTC+CGG | 0.411953 | tig0019346:+4574 | Msa1373060:intergenic |
| GGTTGCGCATGCTTCGGATA+AGG | 0.415599 | tig0019346:+2075 | Msa1373060:intergenic |
| CTACTCTTTATCTTCAATTG+AGG | 0.422344 | tig0019346:-1864 | Msa1373060:CDS |
| AAGTCATCTTCAAGACCATT+AGG | 0.427426 | tig0019346:-1794 | Msa1373060:CDS |
| TTATCCGAAGCATGCGCAAC+CGG | 0.438403 | tig0019346:-2073 | Msa1373060:CDS |
| TACCTATGGAACAATTTCTT+GGG | 0.439074 | tig0019346:-9159 | Msa1373060:CDS |
| TCTACAGCGGCGGCCGGAAG+TGG | 0.441284 | tig0019346:-1458 | Msa1373060:CDS |
| TCTACAGCGGCGGCCGGAAG+TGG | 0.441284 | tig0019346:-4587 | Msa1373060:CDS |
| TCTAAAACAGCATCACCTAA+TGG | 0.445847 | tig0019346:+1779 | Msa1373060:intergenic |
| ACGTCATCTTCAAGACCATT+AGG | 0.446236 | tig0019346:-9132 | Msa1373060:CDS |
| CCGGCATCTACAGCGGCGGC+CGG | 0.451172 | tig0019346:-1464 | Msa1373060:CDS |
| CCGGCATCTACAGCGGCGGC+CGG | 0.451172 | tig0019346:-4593 | Msa1373060:CDS |
| AGGTTTCATGATTTGCAGAC+TGG | 0.456803 | tig0019346:-1350 | Msa1373060:CDS |
| TCCAAAACAGCATCACCTAA+TGG | 0.457612 | tig0019346:+9117 | Msa1373060:intergenic |
| TTTGTGCAACCGTTTGAGGC+TGG | 0.457856 | tig0019346:+9300 | Msa1373060:intergenic |
| ATCAAAGTGTTGCTCTCTCT+CGG | 0.468652 | tig0019346:-9240 | Msa1373060:CDS |
| GTGCATGAATTTGGAAGTGA+TGG | 0.468935 | tig0019346:+1965 | Msa1373060:intergenic |
| TGGACTAGCACTGTTCCAGC+TGG | 0.478277 | tig0019346:-1506 | Msa1373060:CDS |
| TGGACTAGCACTGTTCCAGC+TGG | 0.478277 | tig0019346:-4635 | Msa1373060:CDS |
| CTTGTTGCAACTTCCCATGC+TGG | 0.478479 | tig0019346:-2139 | Msa1373060:CDS |
| TATGGAAGAAAAGTGTATCT+TGG | 0.479714 | tig0019346:-1677 | Msa1373060:CDS |
| AGTATGGAGGAGTGATGCTT+TGG | 0.487463 | tig0019346:-1376 | Msa1373060:CDS |
| GACCTGCGAGATTCATTTCA+GGG | 0.492299 | tig0019346:+1996 | Msa1373060:intergenic |
| GCCAGCAAGGTTTAGAGTTG+GGG | 0.492427 | tig0019346:+9332 | Msa1373060:intergenic |
| GATTGCTATGCCACCAGCAT+GGG | 0.506152 | tig0019346:+2126 | Msa1373060:intergenic |
| CACAGGTTGCAAATTACCTA+TGG | 0.509878 | tig0019346:-9173 | Msa1373060:CDS |
| CTATGGAACAATTTCTTGGG+TGG | 0.517482 | tig0019346:-9156 | Msa1373060:CDS |
| TGGGGCCAAAATGGAAATGA+AGG | 0.518821 | tig0019346:-9435 | Msa1373060:CDS |
| CCGGCCGCCGCTGTAGATGC+CGG | 0.519785 | tig0019346:+1464 | Msa1373060:intergenic |
| CCGGCCGCCGCTGTAGATGC+CGG | 0.519785 | tig0019346:+4593 | Msa1373060:intergenic |
| GGTTTGGCCATTGCCAAAAG+TGG | 0.520401 | tig0019346:+9353 | Msa1373060:intergenic |
| TCTGAAGTCAACACATCTGC+CGG | 0.536946 | tig0019346:+1428 | Msa1373060:intergenic |
| TCTGAAGTCAACACATCTGC+CGG | 0.536946 | tig0019346:+4557 | Msa1373060:intergenic |
| GTGTTGCTCTCTCTCGGAGG+TGG | 0.537411 | tig0019346:-9234 | Msa1373060:CDS |
| GCAGGAATTGCTGTCTATTG+GGG | 0.539336 | tig0019346:-9453 | None:intergenic |
| TGAGGAAAGAGAGTAGCTTC+CGG | 0.540465 | tig0019346:+9209 | Msa1373060:intergenic |
| CATTGTGATCCAGCCTCAAA+CGG | 0.541735 | tig0019346:-9309 | Msa1373060:CDS |
| TGGCCAGCAAGGTTTAGAGT+TGG | 0.542841 | tig0019346:+9330 | Msa1373060:intergenic |
| TTATCTGGAATTGGACATTG+AGG | 0.543911 | tig0019346:+1647 | Msa1373060:intergenic |
| GGTTTCATGATTTGCAGACT+GGG | 0.544792 | tig0019346:-1349 | Msa1373060:CDS |
| GAGGAGTGATGCTTTGGTCA+AGG | 0.544888 | tig0019346:-1370 | Msa1373060:CDS |
| CTCAGCTGATGATGCCACAC+AGG | 0.550683 | tig0019346:-9190 | Msa1373060:CDS |
| TTATGGAACACTTTCTTGGG+TGG | 0.560429 | tig0019346:-1818 | Msa1373060:CDS |
| AACCATTAAGTGCTCTTGCA+AGG | 0.563162 | tig0019346:+9049 | Msa1373060:intergenic |
| ACCCCTGAAATGAATCTCGC+AGG | 0.567411 | tig0019346:-1998 | Msa1373060:CDS |
| TTCCTAAACAAATTCGGTAA+CGG | 0.579160 | tig0019346:-2025 | Msa1373060:CDS |
| CACCCAAGAAATTGTTCCAT+AGG | 0.580557 | tig0019346:+9157 | Msa1373060:intergenic |
| CTGGATCACAATGGCCAGCA+AGG | 0.581308 | tig0019346:+9319 | Msa1373060:intergenic |
| AGGGCTGCCGGCATCTACAG+CGG | 0.585171 | tig0019346:-1471 | Msa1373060:CDS |
| AGGGCTGCCGGCATCTACAG+CGG | 0.585171 | tig0019346:-4600 | Msa1373060:CDS |
| TGGGGCCAAAATGGCAACGA+AGG | 0.591522 | tig0019346:-2100 | Msa1373060:CDS |
| AGATTGCTATGCCACCAGCA+TGG | 0.592121 | tig0019346:+2125 | Msa1373060:intergenic |
| TTTCCATTATATTGACAAGG+TGG | 0.592596 | tig0019346:+1560 | Msa1373060:intergenic |
| TTTCCATTATATTGACAAGG+TGG | 0.592596 | tig0019346:+4689 | Msa1373060:intergenic |
| GTTGCAACTTCCCATGCTGG+TGG | 0.594762 | tig0019346:-2136 | Msa1373060:CDS |
| GGACTAGCACTGTTCCAGCT+GGG | 0.601285 | tig0019346:-1505 | Msa1373060:CDS |
| GGACTAGCACTGTTCCAGCT+GGG | 0.601285 | tig0019346:-4634 | Msa1373060:CDS |
| GCTGCCGGCATCTACAGCGG+CGG | 0.604171 | tig0019346:-1468 | Msa1373060:CDS |
| GCTGCCGGCATCTACAGCGG+CGG | 0.604171 | tig0019346:-4597 | Msa1373060:CDS |
| TTAGGAAAGCTATGTTAACA+TGG | 0.604430 | tig0019346:+2041 | Msa1373060:intergenic |
| ATTTATTCCATGAATTCACA+AGG | 0.612674 | tig0019346:+1528 | Msa1373060:intergenic |
| ATTTATTCCATGAATTCACA+AGG | 0.612674 | tig0019346:+4657 | Msa1373060:intergenic |
| ACCCTTTAAGAAAACCTGCA+AGG | 0.616480 | tig0019346:+1708 | Msa1373060:intergenic |
| ACCTGCGAGATTCATTTCAG+GGG | 0.619333 | tig0019346:+1997 | Msa1373060:intergenic |
| ATGTTTCCATTATATTGACA+AGG | 0.620396 | tig0019346:+1557 | Msa1373060:intergenic |
| ATGTTTCCATTATATTGACA+AGG | 0.620396 | tig0019346:+4686 | Msa1373060:intergenic |
| TGCATGAATTTGGAAGTGAT+GGG | 0.620811 | tig0019346:+1966 | Msa1373060:intergenic |
| TAGGAAAGCTATGTTAACAT+GGG | 0.626283 | tig0019346:+2042 | Msa1373060:intergenic |
| ATTCAAACTTGTCAAAGCAA+CGG | 0.634122 | tig0019346:-9264 | Msa1373060:CDS |
| CTGTGTGGCATCATCAGCTG+AGG | 0.646251 | tig0019346:+9191 | Msa1373060:intergenic |
| GGGAAGTTGCAACAAGAGTG+AGG | 0.646970 | tig0019346:+2146 | Msa1373060:intergenic |
| TGTGTTGCAAGCATCTGCTA+AGG | 0.648082 | tig0019346:+9410 | Msa1373060:intergenic |
| GGTGGCATAGCAATCTATTG+GGG | 0.654630 | tig0019346:-2118 | Msa1373060:CDS |
| TAGGTAATTTGCAACCTGTG+TGG | 0.691863 | tig0019346:+9176 | Msa1373060:intergenic |
| AAAGTGTTGCTCTCTCTCGG+AGG | 0.693552 | tig0019346:-9237 | Msa1373060:CDS |
| CGTTTGAGGCTGGATCACAA+TGG | 0.735602 | tig0019346:+9310 | Msa1373050:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTGTTCATAATA+GGG | - | tig0019346:2760-2779 | Msa1373060:intron | 10.0% |
| !! | AATATATAATTACACATATA+TGG | - | tig0019346:3005-3024 | Msa1373060:intron | 10.0% |
| !! | ATATATAATTACACATATAT+GGG | - | tig0019346:3006-3025 | Msa1373060:intron | 10.0% |
| !!! | GTTATTTTTTATTTTTTTCT+TGG | + | tig0019346:3721-3740 | Msa1373060:intergenic | 10.0% |
| !!! | TGTAATTTTTTAATTTAAGT+AGG | - | tig0019346:3742-3761 | Msa1373060:intron | 10.0% |
| !!! | GTAATTTTTTAATTTAAGTA+GGG | - | tig0019346:3743-3762 | Msa1373060:intron | 10.0% |
| !!! | TAATTTTTTAATTTAAGTAG+GGG | - | tig0019346:3744-3763 | Msa1373060:intron | 10.0% |
| !! | AACATTAAACAAATTATAAA+GGG | + | tig0019346:4232-4251 | Msa1373060:intergenic | 10.0% |
| !! | TAACATTAAACAAATTATAA+AGG | + | tig0019346:4233-4252 | Msa1373060:intergenic | 10.0% |
| !!! | CTTAGTTTTATAATTTAAAA+TGG | - | tig0019346:4552-4571 | Msa1373060:CDS | 10.0% |
| !!! | AAATTTATTGTTTTATTAGT+TGG | + | tig0019346:5191-5210 | Msa1373060:intergenic | 10.0% |
| !! | AGTATAACAAAAAAAAATAT+CGG | + | tig0019346:6995-7014 | Msa1373060:intergenic | 10.0% |
| !!! | TTTATATCTTATTGTTTTTT+TGG | - | tig0019346:7727-7746 | Msa1373060:intron | 10.0% |
| !!! | TTAATTTTATTTAAATAGAC+GGG | - | tig0019346:7758-7777 | Msa1373060:intron | 10.0% |
| !!! | ACACAAATATATTTTTTTTA+GGG | - | tig0019346:7918-7937 | Msa1373060:intron | 10.0% |
| !! | AATAAATATAATTACTAGAA+AGG | + | tig0019346:8198-8217 | Msa1373060:intergenic | 10.0% |
| !! | TATATCTATGTAATAATAAG+AGG | - | tig0019346:2181-2200 | Msa1373060:CDS | 15.0% |
| !! | CATTTAACATATTTATGAAA+AGG | - | tig0019346:2581-2600 | Msa1373060:intron | 15.0% |
| !!! | TAAACTCTACAAAATTTTAT+TGG | + | tig0019346:2684-2703 | Msa1373060:intergenic | 15.0% |
| !! | CTATTATGAACAAAAATAAA+AGG | + | tig0019346:2761-2780 | Msa1373060:intergenic | 15.0% |
| !!! | CTTTTATTTTTGTTCATAAT+AGG | - | tig0019346:2759-2778 | Msa1373060:intron | 15.0% |
| !! | ACAATAATAAAAGATTAAGA+GGG | - | tig0019346:2817-2836 | Msa1373060:intron | 15.0% |
| !!! | TTTTTGCAATTTTTTCATTT+TGG | + | tig0019346:2925-2944 | Msa1373060:intergenic | 15.0% |
| !! | AATTTAAATAGTTAAGGTTA+AGG | + | tig0019346:3066-3085 | Msa1373060:intergenic | 15.0% |
| !! | CTCATTAATTTAAATAGTTA+AGG | + | tig0019346:3072-3091 | Msa1373060:intergenic | 15.0% |
| !!! | AATGGATTTCTAAAAATTAT+GGG | + | tig0019346:3798-3817 | Msa1373060:intergenic | 15.0% |
| !!! | AAATGGATTTCTAAAAATTA+TGG | + | tig0019346:3799-3818 | Msa1373060:intergenic | 15.0% |
| !!! | TAATTTTTAGAAATCCATTT+TGG | - | tig0019346:3799-3818 | Msa1373060:intron | 15.0% |
| !! | TAAATGAATAAGGATAAAAT+TGG | + | tig0019346:4191-4210 | Msa1373060:intergenic | 15.0% |
| !!! | GAATTTTAGATAAATGAATA+AGG | + | tig0019346:4201-4220 | Msa1373060:intergenic | 15.0% |
| !! | ACATTAAACAAATTATAAAG+GGG | + | tig0019346:4231-4250 | Msa1373060:intergenic | 15.0% |
| !!! | ACTTAATTTTATATACTAGT+AGG | + | tig0019346:4955-4974 | Msa1373060:intergenic | 15.0% |
| !! | GAACTTTATATATTTAATTC+AGG | + | tig0019346:5235-5254 | Msa1373060:intergenic | 15.0% |
| !! | TATAGACTAATTTAATCTAA+TGG | + | tig0019346:6535-6554 | Msa1373060:intergenic | 15.0% |
| !! | GTATAACAAAAAAAAATATC+GGG | + | tig0019346:6994-7013 | Msa1373060:intergenic | 15.0% |
| !! | TTAAGTAAACATTCATTTAT+AGG | - | tig0019346:7328-7347 | Msa1373060:intron | 15.0% |
| !!! | ACATAATCTTATTTTTAGTA+GGG | + | tig0019346:7433-7452 | Msa1373060:intergenic | 15.0% |
| !!! | TACATAATCTTATTTTTAGT+AGG | + | tig0019346:7434-7453 | Msa1373060:intergenic | 15.0% |
| !! | AAATTGGAATTAAATTAAGT+AGG | + | tig0019346:7562-7581 | Msa1373060:intergenic | 15.0% |
| !!! | GCATTTTTATTTTATTCTTT+TGG | - | tig0019346:7884-7903 | Msa1373060:intron | 15.0% |
| !! | CTAAAAAAAATATATTTGTG+TGG | + | tig0019346:7919-7938 | Msa1373060:intergenic | 15.0% |
| !!! | CACACAAATATATTTTTTTT+AGG | - | tig0019346:7917-7936 | Msa1373060:intron | 15.0% |
| !!! | TTTTGACAATTAAAATTTGT+GGG | + | tig0019346:7949-7968 | Msa1373060:intergenic | 15.0% |
| !!! | TTTTTGACAATTAAAATTTG+TGG | + | tig0019346:7950-7969 | Msa1373060:intergenic | 15.0% |
| !!! | GAACTTTAGATATTTAATTT+AGG | + | tig0019346:8352-8371 | Msa1373060:intergenic | 15.0% |
| !!! | AGTTTATTAGTCTATGTATT+TGG | - | tig0019346:2085-2104 | Msa1373060:CDS | 20.0% |
| !!! | AGACTTTAGTTTTTTTAACT+AGG | + | tig0019346:2440-2459 | Msa1373060:intergenic | 20.0% |
| !! | ATATTTATGAAAAGGCTAAT+AGG | - | tig0019346:2589-2608 | Msa1373060:intron | 20.0% |
| !! | GACAATAATAAAAGATTAAG+AGG | - | tig0019346:2816-2835 | Msa1373060:intron | 20.0% |
| !!! | ATTTTTTCATTTTGGAAATC+AGG | + | tig0019346:2917-2936 | Msa1373060:intergenic | 20.0% |
| !!! | ATAGCGTTTTTATTTTACTA+AGG | + | tig0019346:3383-3402 | Msa1373060:intergenic | 20.0% |
| !! | TAAGTGATTATACAAATTGA+TGG | - | tig0019346:3627-3646 | Msa1373060:intron | 20.0% |
| !!! | TACCGTTATATATTTTGTTT+TGG | - | tig0019346:4251-4270 | Msa1373060:intron | 20.0% |
| !! | AGCCAAAACAAAATATATAA+CGG | + | tig0019346:4256-4275 | Msa1373060:intergenic | 20.0% |
| !!! | TTGCTACAACATTTTTTTTA+AGG | - | tig0019346:4428-4447 | Msa1373060:intron | 20.0% |
| !!! | TATGTTTTCCATTGAATTAA+CGG | + | tig0019346:4674-4693 | Msa1373060:intergenic | 20.0% |
| !! | TAAACCTAAAATGACATAAA+AGG | + | tig0019346:4735-4754 | Msa1373060:intergenic | 20.0% |
| !! | TGACAATTAAAATTTGTGTT+TGG | + | tig0019346:4913-4932 | Msa1373060:intergenic | 20.0% |
| !!! | ATTTTAATTGTCAGAAAAGT+TGG | - | tig0019346:4920-4939 | Msa1373060:intron | 20.0% |
| !! | TTAATTCAGGATAAATTGAA+TGG | + | tig0019346:5222-5241 | Msa1373060:intergenic | 20.0% |
| !! | TATTTATAGGATGAGAAAAA+TGG | + | tig0019346:5371-5390 | Msa1373060:intergenic | 20.0% |
| !!! | AAACTTTGATTCCTTTATTT+TGG | + | tig0019346:5728-5747 | Msa1373060:intergenic | 20.0% |
| !!! | ATCAAAGTTTTACTTTCAAT+TGG | - | tig0019346:5738-5757 | Msa1373060:intron | 20.0% |
| !!! | GAAACGTTTCAAAATTTTTA+TGG | - | tig0019346:5805-5824 | Msa1373060:intron | 20.0% |
| !!! | ATAGATTTTGATATTGAACT+TGG | - | tig0019346:5888-5907 | Msa1373060:intron | 20.0% |
| !! | ATTAAGAAGTCAAAAAAGTA+TGG | - | tig0019346:6248-6267 | Msa1373060:intron | 20.0% |
| !!! | CTCTATCTTTAAGAATAATT+GGG | + | tig0019346:6668-6687 | Msa1373060:intergenic | 20.0% |
| !! | AACTTAAATTCAGTTTAAGT+AGG | - | tig0019346:7359-7378 | Msa1373060:intron | 20.0% |
| !! | GTTATGTAAACTAAGTTTAT+AGG | + | tig0019346:7387-7406 | Msa1373060:intergenic | 20.0% |
| !!! | AATACGACACTTTTTTTTTA+AGG | - | tig0019346:7499-7518 | Msa1373060:intron | 20.0% |
| !!! | TACATTCAAACATTTTCTAT+TGG | + | tig0019346:7691-7710 | Msa1373060:intergenic | 20.0% |
| !! | TTTGACAATTAAAATTTGTG+GGG | + | tig0019346:7948-7967 | Msa1373060:intergenic | 20.0% |
| !!! | TTTATTGCTTTATTAGTTGA+AGG | + | tig0019346:8305-8324 | Msa1373060:intergenic | 20.0% |
| !!! | CAATTTAGAAATTTGATGAT+TGG | + | tig0019346:8485-8504 | Msa1373060:intergenic | 20.0% |
| !! | TATTTATAGGATGAGAAAAA+TGG | + | tig0019346:5371-5390 | Msa1373060:intergenic | 20.0% |
| !! | ATTGTACTTAGGATATTTAT+AGG | + | tig0019346:8521-8540 | Msa1373060:intergenic | 20.0% |
| !!! | AAACTTTGATTCCTTTATTT+TGG | + | tig0019346:5728-5747 | Msa1373060:intergenic | 20.0% |
| !!! | ATCAAAGTTTTACTTTCAAT+TGG | - | tig0019346:5738-5757 | Msa1373060:intron | 20.0% |
| !!! | GAAACGTTTCAAAATTTTTA+TGG | - | tig0019346:5805-5824 | Msa1373060:intron | 20.0% |
| !!! | ATAGATTTTGATATTGAACT+TGG | - | tig0019346:5888-5907 | Msa1373060:intron | 20.0% |
| !! | ATTAAGAAGTCAAAAAAGTA+TGG | - | tig0019346:6248-6267 | Msa1373060:intron | 20.0% |
| !!! | ATTGATTTTGATATTGAAGC+TGG | - | tig0019346:1679-1698 | Msa1373060:CDS | 25.0% |
| !!! | TTAATGGTTTTAGTTCACAA+AGG | - | tig0019346:1734-1753 | Msa1373060:CDS | 25.0% |
| !!! | CCAATATCATTTTTCTACAT+GGG | + | tig0019346:2351-2370 | Msa1373060:intergenic | 25.0% |
| !!! | TCCAATATCATTTTTCTACA+TGG | + | tig0019346:2352-2371 | Msa1373060:intergenic | 25.0% |
| ! | TGATATTGGAACACAAAAAT+TGG | - | tig0019346:2362-2381 | Msa1373060:intron | 25.0% |
| ! | GATATTGGAACACAAAAATT+GGG | - | tig0019346:2363-2382 | Msa1373060:intron | 25.0% |
| !!! | GGCTTTATTTAATTTTGTCA+TGG | - | tig0019346:2485-2504 | Msa1373060:intron | 25.0% |
| !!! | TACAAATTAGGTTTTTAGAG+AGG | + | tig0019346:2541-2560 | Msa1373060:intergenic | 25.0% |
| ! | CAATATATGCTTATAAAGTG+GGG | + | tig0019346:2652-2671 | Msa1373060:intergenic | 25.0% |
| ! | GCAATATATGCTTATAAAGT+GGG | + | tig0019346:2653-2672 | Msa1373060:intergenic | 25.0% |
| ! | TGCAATATATGCTTATAAAG+TGG | + | tig0019346:2654-2673 | Msa1373060:intergenic | 25.0% |
| ! | GTTTATTAGCATCTACAAAA+TGG | + | tig0019346:2712-2731 | Msa1373060:intergenic | 25.0% |
| ! | TTAGCACTATTAAATAGGTT+AGG | + | tig0019346:3113-3132 | Msa1373060:intergenic | 25.0% |
| ! | GAACTTTAGCACTATTAAAT+AGG | + | tig0019346:3118-3137 | Msa1373060:intergenic | 25.0% |
| ! | GTTTCAATAATCAAAACACT+CGG | - | tig0019346:3238-3257 | Msa1373060:intron | 25.0% |
| !!! | TTCGACTCTCTTTTTAAAAT+AGG | - | tig0019346:3357-3376 | Msa1373060:intron | 25.0% |
| !!! | TTTTTTAATTTAAGTAGGGG+TGG | - | tig0019346:3747-3766 | Msa1373060:intron | 25.0% |
| !!! | TTTTTAATTTAAGTAGGGGT+GGG | - | tig0019346:3748-3767 | Msa1373060:intron | 25.0% |
| !!! | AAGCTATAAGCTCTTTTTTT+GGG | + | tig0019346:4008-4027 | Msa1373060:intergenic | 25.0% |
| !!! | AAAGCTATAAGCTCTTTTTT+TGG | + | tig0019346:4009-4028 | Msa1373060:intergenic | 25.0% |
| !!! | ATGTCCTTTTATGTCATTTT+AGG | - | tig0019346:4728-4747 | Msa1373060:CDS | 25.0% |
| ! | TTTGTGTTTGGTAAAAATAG+CGG | + | tig0019346:4901-4920 | Msa1373060:intergenic | 25.0% |
| !!! | GCAAAGAATGTTGTTTATTT+TGG | + | tig0019346:5320-5339 | Msa1373060:intergenic | 25.0% |
| ! | TAAACAACATTCTTTGCAAA+TGG | - | tig0019346:5323-5342 | Msa1373060:intron | 25.0% |
| ! | AAACAACATTCTTTGCAAAT+GGG | - | tig0019346:5324-5343 | Msa1373060:intron | 25.0% |
| ! | CTTGTACTTAGGATATTTAT+AGG | + | tig0019346:5384-5403 | Msa1373060:intergenic | 25.0% |
| ! | ATAGCTTTCCTAAACAAATT+CGG | - | tig0019346:5609-5628 | Msa1373060:intron | 25.0% |
| ! | ATCAAAGATTGCCAAAATAA+AGG | - | tig0019346:5714-5733 | Msa1373060:intron | 25.0% |
| !! | AAAGTTTTACTTTCAATTGG+TGG | - | tig0019346:5741-5760 | Msa1373060:intron | 25.0% |
| !! | ATTTTTATGGAACACTTTCT+TGG | - | tig0019346:5818-5837 | Msa1373060:intron | 25.0% |
| !! | TTTTTATGGAACACTTTCTT+GGG | - | tig0019346:5819-5838 | Msa1373060:intron | 25.0% |
| !! | TCCAATTCCAGATAAATTTT+TGG | - | tig0019346:6001-6020 | Msa1373060:intron | 25.0% |
| !! | CCAATTCCAGATAAATTTTT+GGG | - | tig0019346:6002-6021 | Msa1373060:intron | 25.0% |
| ! | ATGTTTCCATTATATTGACA+AGG | + | tig0019346:6086-6105 | Msa1373060:intergenic | 25.0% |
| ! | ATTTATTCCATGAATTCACA+AGG | + | tig0019346:6115-6134 | Msa1373060:intergenic | 25.0% |
| ! | TTGTGAATTCATGGAATAAA+TGG | - | tig0019346:6114-6133 | Msa1373060:intron | 25.0% |
| !!! | TTTTTTGACTTCTTAATCAC+AGG | + | tig0019346:6245-6264 | Msa1373060:intergenic | 25.0% |
| ! | AATCTAATGGTCAAAATAAG+TGG | + | tig0019346:6522-6541 | Msa1373060:intergenic | 25.0% |
| ! | TAGAAAGTGAATGTGATAAT+AGG | - | tig0019346:6564-6583 | Msa1373060:intron | 25.0% |
| ! | AGAAAGTGAATGTGATAATA+GGG | - | tig0019346:6565-6584 | Msa1373060:intron | 25.0% |
| !! | GCTCTATCTTTAAGAATAAT+TGG | + | tig0019346:6669-6688 | Msa1373060:intergenic | 25.0% |
| !! | GTTTTTCATTCATAGTCTAT+TGG | - | tig0019346:7173-7192 | Msa1373060:intron | 25.0% |
| ! | ATTTAATTAACGTTAACACG+TGG | + | tig0019346:7308-7327 | Msa1373060:intergenic | 25.0% |
| ! | AGAATCATAAAAGAATGTTG+AGG | - | tig0019346:7453-7472 | Msa1373060:intron | 25.0% |
| !! | GGCAAAATTTAAGTTAGAAA+GGG | + | tig0019346:7654-7673 | Msa1373060:intergenic | 25.0% |
| !! | ATTCAAACATTTTCTATTGG+TGG | + | tig0019346:7688-7707 | Msa1373060:intergenic | 25.0% |
| ! | GAAAATGTTTGAATGTATGA+AGG | - | tig0019346:7694-7713 | Msa1373060:intron | 25.0% |
| !! | GGTCATGTTATACTTTAAAA+TGG | + | tig0019346:8177-8196 | Msa1373060:intergenic | 25.0% |
| ! | TTGCAGAATTATACTTTAGT+GGG | + | tig0019346:8246-8265 | Msa1373060:intergenic | 25.0% |
| !!! | TCATTTTTTTTGCTAGACTA+TGG | + | tig0019346:8378-8397 | Msa1373060:intergenic | 25.0% |
| ! | TAGTCTAGCAAAAAAAATGA+CGG | - | tig0019346:8378-8397 | Msa1373060:intron | 25.0% |
| ! | GTGAATGATTTATTGTACTT+AGG | + | tig0019346:8532-8551 | Msa1373060:intergenic | 25.0% |
| ! | ATAGCTTTCCTAAACAAATT+CGG | - | tig0019346:5609-5628 | Msa1373060:intron | 25.0% |
| ! | ATCAAAGATTGCCAAAATAA+AGG | - | tig0019346:5714-5733 | Msa1373060:intron | 25.0% |
| !! | AAAGTTTTACTTTCAATTGG+TGG | - | tig0019346:5741-5760 | Msa1373060:intron | 25.0% |
| !! | ATTTTTATGGAACACTTTCT+TGG | - | tig0019346:5818-5837 | Msa1373060:intron | 25.0% |
| !! | TTTTTATGGAACACTTTCTT+GGG | - | tig0019346:5819-5838 | Msa1373060:intron | 25.0% |
| !! | TCCAATTCCAGATAAATTTT+TGG | - | tig0019346:6001-6020 | Msa1373060:intron | 25.0% |
| !! | CCAATTCCAGATAAATTTTT+GGG | - | tig0019346:6002-6021 | Msa1373060:intron | 25.0% |
| ! | ATGTTTCCATTATATTGACA+AGG | + | tig0019346:6086-6105 | Msa1373060:intergenic | 25.0% |
| ! | ATTTATTCCATGAATTCACA+AGG | + | tig0019346:6115-6134 | Msa1373060:intergenic | 25.0% |
| ! | TTGTGAATTCATGGAATAAA+TGG | - | tig0019346:6114-6133 | Msa1373060:intron | 25.0% |
| !!! | TTTTTTGACTTCTTAATCAC+AGG | + | tig0019346:6245-6264 | Msa1373060:intergenic | 25.0% |
| ! | ATAGCTTTTCTATCCACTTT+TGG | - | tig0019346:1403-1422 | Msa1373060:CDS | 30.0% |
| ATTCAAACTTGTCAAAGCAA+CGG | - | tig0019346:1505-1524 | Msa1373060:CDS | 30.0% | |
| TTACCTATGGAACAATTTCT+TGG | - | tig0019346:1609-1628 | Msa1373060:CDS | 30.0% | |
| TACCTATGGAACAATTTCTT+GGG | - | tig0019346:1610-1629 | Msa1373060:CDS | 30.0% | |
| CTAACAATCTTGTTAATGCT+TGG | - | tig0019346:1837-1856 | Msa1373060:CDS | 30.0% | |
| TTGTTAATGCTTGGAATCAA+TGG | - | tig0019346:1846-1865 | Msa1373060:CDS | 30.0% | |
| ! | CAAGCTAAACAAGTGTTTTT+AGG | - | tig0019346:1878-1897 | Msa1373060:CDS | 30.0% |
| ! | ATTTGGGATAGATTCAATGA+TGG | - | tig0019346:2013-2032 | Msa1373060:CDS | 30.0% |
| CATAGCACTTATTAATGTGT+AGG | + | tig0019346:2142-2161 | Msa1373060:intergenic | 30.0% | |
| GAAAATAATGTGTGATTTCC+AGG | - | tig0019346:2209-2228 | Msa1373060:intron | 30.0% | |
| ! | ATTTTTCTACATGGGATTGT+AGG | + | tig0019346:2343-2362 | Msa1373060:intergenic | 30.0% |
| CCCATGTAGAAAAATGATAT+TGG | - | tig0019346:2348-2367 | Msa1373060:intron | 30.0% | |
| TGACCTATTTAAGAAAGGTT+CGG | + | tig0019346:2415-2434 | Msa1373060:intergenic | 30.0% | |
| !! | TTCGACTATTAGTTTGCTAA+AGG | - | tig0019346:2464-2483 | Msa1373060:intron | 30.0% |
| CTTATTTCGAATCACAAGTA+AGG | + | tig0019346:2788-2807 | Msa1373060:intergenic | 30.0% | |
| AATGAGTTACAAAACTCTCT+TGG | + | tig0019346:2888-2907 | Msa1373060:intergenic | 30.0% | |
| GGTTTATAGAAAAGTCTACT+AGG | + | tig0019346:3045-3064 | Msa1373060:intergenic | 30.0% | |
| GAGATGTGAAATTTACCTAA+CGG | - | tig0019346:3490-3509 | Msa1373060:intron | 30.0% | |
| GTGATTATACAAATTGATGG+TGG | - | tig0019346:3630-3649 | Msa1373060:intron | 30.0% | |
| AAACATTCTGATTGTATGCA+GGG | + | tig0019346:3865-3884 | Msa1373060:intergenic | 30.0% | |
| TAAACATTCTGATTGTATGC+AGG | + | tig0019346:3866-3885 | Msa1373060:intergenic | 30.0% | |
| TGACTAACATGTTACGTTTA+AGG | - | tig0019346:4339-4358 | Msa1373060:intron | 30.0% | |
| TAGTTGAACCGTTAATTCAA+TGG | - | tig0019346:4663-4682 | Msa1373060:CDS | 30.0% | |
| ! | GAAGTGTTTGGTAAAATTAG+CGG | + | tig0019346:4771-4790 | Msa1373060:intergenic | 30.0% |
| ! | GATAAGCTAATTGAAGTGTT+TGG | + | tig0019346:4783-4802 | Msa1373060:intergenic | 30.0% |
| ! | TTAATGTGAAGACTCTGAAA+AGG | + | tig0019346:4989-5008 | Msa1373060:intergenic | 30.0% |
| TCTAGTCAGACATAAAATGA+CGG | - | tig0019346:5261-5280 | Msa1373060:intron | 30.0% | |
| AGACATAAAATGACGGTAAT+GGG | - | tig0019346:5268-5287 | Msa1373060:intron | 30.0% | |
| GTGAATGATTTCTTGTACTT+AGG | + | tig0019346:5395-5414 | Msa1373060:intergenic | 30.0% | |
| !! | GAAAGTGTTTGTTTCTAGTT+TGG | + | tig0019346:5424-5443 | Msa1373060:intergenic | 30.0% |
| AACAAACACTTTCACAAAGA+TGG | - | tig0019346:5431-5450 | Msa1373060:intron | 30.0% | |
| TAGGAAAGCTATGTTAACAT+GGG | + | tig0019346:5601-5620 | Msa1373060:intergenic | 30.0% | |
| TTAGGAAAGCTATGTTAACA+TGG | + | tig0019346:5602-5621 | Msa1373060:intergenic | 30.0% | |
| TTCCTAAACAAATTCGGTAA+CGG | - | tig0019346:5615-5634 | Msa1373060:intron | 30.0% | |
| ! | CTGAATTTTGTGCATGAATT+TGG | + | tig0019346:5687-5706 | Msa1373060:intergenic | 30.0% |
| CTACTCTTTATCTTCAATTG+AGG | - | tig0019346:5776-5795 | Msa1373060:intron | 30.0% | |
| ! | CTTAAAGGGTATAGTAGATA+TGG | - | tig0019346:5945-5964 | Msa1373060:intron | 30.0% |
| ! | TATGGAAGAAAAGTGTATCT+TGG | - | tig0019346:5963-5982 | Msa1373060:intron | 30.0% |
| ! | CCCAAAAATTTATCTGGAAT+TGG | + | tig0019346:6005-6024 | Msa1373060:intergenic | 30.0% |
| !!! | AGGTCTTTTTGACTTTGTTT+GGG | - | tig0019346:6040-6059 | Msa1373060:intron | 30.0% |
| AATCCACCTTGTCAATATAA+TGG | - | tig0019346:6077-6096 | Msa1373060:intron | 30.0% | |
| TTTCCATTATATTGACAAGG+TGG | + | tig0019346:6083-6102 | Msa1373060:intergenic | 30.0% | |
| TAACTAACCTTGTGAATTCA+TGG | - | tig0019346:6105-6124 | Msa1373060:intron | 30.0% | |
| ! | AAGAAGTCAAAAAAGTATGG+AGG | - | tig0019346:6251-6270 | Msa1373060:intron | 30.0% |
| GTGTGATAAGTTGTTGTAAT+TGG | - | tig0019346:6338-6357 | Msa1373060:intron | 30.0% | |
| !!! | CAAATGGATTATCCACTTTT+GGG | - | tig0019346:6453-6472 | Msa1373060:intron | 30.0% |
| AGAATAATTGGGTATACTCT+TGG | + | tig0019346:6657-6676 | Msa1373060:intergenic | 30.0% | |
| ! | AAAGTATCAGGTGAGTATAT+GGG | + | tig0019346:6960-6979 | Msa1373060:intergenic | 30.0% |
| !! | AAAAGTATCAGGTGAGTATA+TGG | + | tig0019346:6961-6980 | Msa1373060:intergenic | 30.0% |
| ! | GAATATCCATGATTGTTTCT+AGG | + | tig0019346:7115-7134 | Msa1373060:intergenic | 30.0% |
| CATATAAACTCGGTATAAGT+AGG | + | tig0019346:7409-7428 | Msa1373060:intergenic | 30.0% | |
| TTAGTAGGGACATATAAACT+CGG | + | tig0019346:7419-7438 | Msa1373060:intergenic | 30.0% | |
| ATCATAAAAGAATGTTGAGG+AGG | - | tig0019346:7456-7475 | Msa1373060:intron | 30.0% | |
| TACAGTACGTCTAATGAAAT+TGG | + | tig0019346:7578-7597 | Msa1373060:intergenic | 30.0% | |
| ! | TAACTTGTCTAAAGAAGCTA+AGG | - | tig0019346:7610-7629 | Msa1373060:intron | 30.0% |
| ! | GGGCAAAATTTAAGTTAGAA+AGG | + | tig0019346:7655-7674 | Msa1373060:intergenic | 30.0% |
| GAATTATACTTTAGTGGGAA+AGG | + | tig0019346:8241-8260 | Msa1373060:intergenic | 30.0% | |
| CTTGCAGAATTATACTTTAG+TGG | + | tig0019346:8247-8266 | Msa1373060:intergenic | 30.0% | |
| ! | GCTTTATTAGTTGAAGGTTA+GGG | + | tig0019346:8299-8318 | Msa1373060:intergenic | 30.0% |
| ! | TGCTTTATTAGTTGAAGGTT+AGG | + | tig0019346:8300-8319 | Msa1373060:intergenic | 30.0% |
| TCCAAAATAAACAACATCCT+TGG | - | tig0019346:8433-8452 | Msa1373060:intron | 30.0% | |
| ! | TTGATGATTGGAATGAAGTT+CGG | + | tig0019346:8473-8492 | Msa1373060:intergenic | 30.0% |
| AACAAACACTTTCACAAAGA+TGG | - | tig0019346:5431-5450 | Msa1373060:intron | 30.0% | |
| TAGGAAAGCTATGTTAACAT+GGG | + | tig0019346:5601-5620 | Msa1373060:intergenic | 30.0% | |
| TTAGGAAAGCTATGTTAACA+TGG | + | tig0019346:5602-5621 | Msa1373060:intergenic | 30.0% | |
| TTCCTAAACAAATTCGGTAA+CGG | - | tig0019346:5615-5634 | Msa1373060:intron | 30.0% | |
| ! | CTGAATTTTGTGCATGAATT+TGG | + | tig0019346:5687-5706 | Msa1373060:intergenic | 30.0% |
| CTACTCTTTATCTTCAATTG+AGG | - | tig0019346:5776-5795 | Msa1373060:intron | 30.0% | |
| ! | CTTAAAGGGTATAGTAGATA+TGG | - | tig0019346:5945-5964 | Msa1373060:intron | 30.0% |
| ! | TATGGAAGAAAAGTGTATCT+TGG | - | tig0019346:5963-5982 | Msa1373060:intron | 30.0% |
| ! | CCCAAAAATTTATCTGGAAT+TGG | + | tig0019346:6005-6024 | Msa1373060:intergenic | 30.0% |
| !!! | AGGTCTTTTTGACTTTGTTT+GGG | - | tig0019346:6040-6059 | Msa1373060:intron | 30.0% |
| AATCCACCTTGTCAATATAA+TGG | - | tig0019346:6077-6096 | Msa1373060:intron | 30.0% | |
| TTTCCATTATATTGACAAGG+TGG | + | tig0019346:6083-6102 | Msa1373060:intergenic | 30.0% | |
| TAACTAACCTTGTGAATTCA+TGG | - | tig0019346:6105-6124 | Msa1373060:intron | 30.0% | |
| ! | AAGAAGTCAAAAAAGTATGG+AGG | - | tig0019346:6251-6270 | Msa1373060:intron | 30.0% |
| ! | AGGAACCTTCATTTCCATTT+TGG | + | tig0019346:1342-1361 | Msa1373060:intergenic | 35.0% |
| !! | TTTCTATCCACTTTTGGCAA+TGG | - | tig0019346:1409-1428 | Msa1373060:CDS | 35.0% |
| !! | GATTTTGATATTGAAGCTGG+TGG | - | tig0019346:1682-1701 | Msa1373060:CDS | 35.0% |
| TAGTGTTTCCACTTGAGTAT+TGG | + | tig0019346:1820-1839 | Msa1373060:intergenic | 35.0% | |
| ATCAAGGGTTCTGCTAAATA+TGG | - | tig0019346:1980-1999 | Msa1373060:CDS | 35.0% | |
| !! | AATATGGTGGTGTCATGATT+TGG | - | tig0019346:1996-2015 | Msa1373060:CDS | 35.0% |
| !! | ATATGGTGGTGTCATGATTT+GGG | - | tig0019346:1997-2016 | Msa1373060:CDS | 35.0% |
| !! | AGATTCAATGATGGACAAAG+TGG | - | tig0019346:2022-2041 | Msa1373060:CDS | 35.0% |
| !! | GATTCAATGATGGACAAAGT+GGG | - | tig0019346:2023-2042 | Msa1373060:CDS | 35.0% |
| TGGGTATAGTAATGCTATCA+AGG | - | tig0019346:2042-2061 | Msa1373060:CDS | 35.0% | |
| GGGTATAGTAATGCTATCAA+GGG | - | tig0019346:2043-2062 | Msa1373060:CDS | 35.0% | |
| TGGAATAAGTAGCATGTTCA+TGG | - | tig0019346:2105-2124 | Msa1373060:CDS | 35.0% | |
| ATAAGTAGCATGTTCATGGT+AGG | - | tig0019346:2109-2128 | Msa1373060:CDS | 35.0% | |
| ATAAGTGCTATGTGATCACT+TGG | - | tig0019346:2150-2169 | Msa1373060:CDS | 35.0% | |
| CAAATAAGCTGCATATTTCC+TGG | + | tig0019346:2230-2249 | Msa1373060:intergenic | 35.0% | |
| GAACCTTTCTTAAATAGGTC+AGG | - | tig0019346:2414-2433 | Msa1373060:intron | 35.0% | |
| !! | TCATGGCCTTTTTAAAAGCA+CGG | - | tig0019346:2502-2521 | Msa1373060:intron | 35.0% |
| !! | AGGTTTTTAGAGAGGCTAAT+AGG | + | tig0019346:2533-2552 | Msa1373060:intergenic | 35.0% |
| ! | CAATTCACACGACATACTTT+TGG | + | tig0019346:2849-2868 | Msa1373060:intergenic | 35.0% |
| AAAAGTCTACTAGGTCTATC+AGG | + | tig0019346:3036-3055 | Msa1373060:intergenic | 35.0% | |
| AATCAAAACACTCGGATTCA+AGG | - | tig0019346:3246-3265 | Msa1373060:intron | 35.0% | |
| ATCAAAACACTCGGATTCAA+GGG | - | tig0019346:3247-3266 | Msa1373060:intron | 35.0% | |
| CTATTTCATAGAAACAACCC+TGG | + | tig0019346:3333-3352 | Msa1373060:intergenic | 35.0% | |
| !! | CAGGGTTGTTTCTATGAAAT+AGG | - | tig0019346:3331-3350 | Msa1373060:intron | 35.0% |
| !! | GGTTGTTTCTATGAAATAGG+AGG | - | tig0019346:3334-3353 | Msa1373060:intron | 35.0% |
| AGGGGAAAACGAATTGTTTA+TGG | - | tig0019346:3547-3566 | Msa1373060:intron | 35.0% | |
| GTGACAAAAAAAGCTCTGTT+TGG | - | tig0019346:4052-4071 | Msa1373060:intron | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | - | tig0019346:4090-4109 | Msa1373060:intron | 35.0% | |
| CTATAAGCTCAAACGCTATT+TGG | + | tig0019346:4145-4164 | Msa1373060:intergenic | 35.0% | |
| ! | TTGTCAGAAAAGTTGGTTGT+TGG | - | tig0019346:4927-4946 | Msa1373060:intron | 35.0% |
| CAGACATAAAATGACGGTAA+TGG | - | tig0019346:5267-5286 | Msa1373060:intron | 35.0% | |
| !! | TAAAATGACGGTAATGGGAA+AGG | - | tig0019346:5273-5292 | Msa1373060:intron | 35.0% |
| !!! | GTTAACATGGGAGTATTTTC+CGG | + | tig0019346:5589-5608 | Msa1373060:intergenic | 35.0% |
| TGCATGAATTTGGAAGTGAT+GGG | + | tig0019346:5677-5696 | Msa1373060:intergenic | 35.0% | |
| ! | GTTTTACTTTCAATTGGTGG+TGG | - | tig0019346:5744-5763 | Msa1373060:intron | 35.0% |
| AAGTCATCTTCAAGACCATT+AGG | - | tig0019346:5846-5865 | Msa1373060:intron | 35.0% | |
| ! | TCTAAAACAGCATCACCTAA+TGG | + | tig0019346:5864-5883 | Msa1373060:intergenic | 35.0% |
| !!! | TTAGGTGATGCTGTTTTAGA+TGG | - | tig0019346:5864-5883 | Msa1373060:intron | 35.0% |
| ! | ACCTTGCAGGTTTTCTTAAA+GGG | - | tig0019346:5931-5950 | Msa1373060:intron | 35.0% |
| ! | TTATCTGGAATTGGACATTG+AGG | + | tig0019346:5996-6015 | Msa1373060:intergenic | 35.0% |
| !!! | CAGGTCTTTTTGACTTTGTT+TGG | - | tig0019346:6039-6058 | Msa1373060:intron | 35.0% |
| !! | CAGCTGGGAAGATATTTTTA+GGG | - | tig0019346:6150-6169 | Msa1373060:intron | 35.0% |
| TAATCCATTTGCGCACAATT+GGG | + | tig0019346:6444-6463 | Msa1373060:intergenic | 35.0% | |
| ATAATCCATTTGCGCACAAT+TGG | + | tig0019346:6445-6464 | Msa1373060:intergenic | 35.0% | |
| !!! | GCAAATGGATTATCCACTTT+TGG | - | tig0019346:6452-6471 | Msa1373060:intron | 35.0% |
| TGTAGTTGGGCAATTTAGTT+GGG | + | tig0019346:6740-6759 | Msa1373060:intergenic | 35.0% | |
| ACTTGTGTGACATTATGTCA+CGG | - | tig0019346:6778-6797 | Msa1373060:intron | 35.0% | |
| ACAACACATACAACACATCT+GGG | + | tig0019346:6846-6865 | Msa1373060:intergenic | 35.0% | |
| ACTTGTGTGACATTATGTCA+CGG | + | tig0019346:6778-6797 | Msa1373060:intergenic | 35.0% | |
| AAGTATCAGGTGAGTATATG+GGG | + | tig0019346:6959-6978 | Msa1373060:intergenic | 35.0% | |
| !! | GTGTGACTAGAAAAAGTATC+AGG | + | tig0019346:6972-6991 | Msa1373060:intergenic | 35.0% |
| !! | GATTGTTTCTAGGTGGAAAA+GGG | + | tig0019346:7105-7124 | Msa1373060:intergenic | 35.0% |
| !! | TGATTGTTTCTAGGTGGAAA+AGG | + | tig0019346:7106-7125 | Msa1373060:intergenic | 35.0% |
| TTTCCACCTAGAAACAATCA+TGG | - | tig0019346:7106-7125 | Msa1373060:intron | 35.0% | |
| !! | TATCCATGATTGTTTCTAGG+TGG | + | tig0019346:7112-7131 | Msa1373060:intergenic | 35.0% |
| ! | AAATGCGTGTGTTCTTTTCT+TGG | + | tig0019346:7870-7889 | Msa1373060:intergenic | 35.0% |
| ! | TTAACGTGAAGACTCTGAAA+AGG | + | tig0019346:8001-8020 | Msa1373060:intergenic | 35.0% |
| TTTCAGAGTCTTCACGTTAA+CGG | - | tig0019346:8001-8020 | Msa1373060:intron | 35.0% | |
| AGCAAAAAAAATGACGGTAG+TGG | - | tig0019346:8384-8403 | Msa1373060:intron | 35.0% | |
| GCAAAAAAAATGACGGTAGT+GGG | - | tig0019346:8385-8404 | Msa1373060:intron | 35.0% | |
| !! | GCCAAGGATGTTGTTTATTT+TGG | + | tig0019346:8437-8456 | Msa1373060:intergenic | 35.0% |
| TAAACAACATCCTTGGCAAA+TGG | - | tig0019346:8440-8459 | Msa1373060:intron | 35.0% | |
| AAACAACATCCTTGGCAAAT+GGG | - | tig0019346:8441-8460 | Msa1373060:intron | 35.0% | |
| !!! | GTTAACATGGGAGTATTTTC+CGG | + | tig0019346:5589-5608 | Msa1373060:intergenic | 35.0% |
| TGCATGAATTTGGAAGTGAT+GGG | + | tig0019346:5677-5696 | Msa1373060:intergenic | 35.0% | |
| ! | GTTTTACTTTCAATTGGTGG+TGG | - | tig0019346:5744-5763 | Msa1373060:intron | 35.0% |
| AAGTCATCTTCAAGACCATT+AGG | - | tig0019346:5846-5865 | Msa1373060:intron | 35.0% | |
| ! | TCTAAAACAGCATCACCTAA+TGG | + | tig0019346:5864-5883 | Msa1373060:intergenic | 35.0% |
| !!! | TTAGGTGATGCTGTTTTAGA+TGG | - | tig0019346:5864-5883 | Msa1373060:intron | 35.0% |
| ! | ACCTTGCAGGTTTTCTTAAA+GGG | - | tig0019346:5931-5950 | Msa1373060:intron | 35.0% |
| ! | TTATCTGGAATTGGACATTG+AGG | + | tig0019346:5996-6015 | Msa1373060:intergenic | 35.0% |
| !!! | CAGGTCTTTTTGACTTTGTT+TGG | - | tig0019346:6039-6058 | Msa1373060:intron | 35.0% |
| !! | CAGCTGGGAAGATATTTTTA+GGG | - | tig0019346:6150-6169 | Msa1373060:intron | 35.0% |
| GGGTATAGCACTTCTATTAT+TGG | - | tig0019346:6311-6330 | Msa1373060:intron | 35.0% | |
| AAACTTTGTGCAACCGTTTG+AGG | + | tig0019346:1476-1495 | Msa1373060:intergenic | 40.0% | |
| !! | ATCAAAGTGTTGCTCTCTCT+CGG | - | tig0019346:1529-1548 | Msa1373060:CDS | 40.0% |
| ! | TAGGTAATTTGCAACCTGTG+TGG | + | tig0019346:1596-1615 | Msa1373060:intergenic | 40.0% |
| CACAGGTTGCAAATTACCTA+TGG | - | tig0019346:1596-1615 | Msa1373060:CDS | 40.0% | |
| CACCCAAGAAATTGTTCCAT+AGG | + | tig0019346:1615-1634 | Msa1373060:intergenic | 40.0% | |
| CTATGGAACAATTTCTTGGG+TGG | - | tig0019346:1613-1632 | Msa1373060:CDS | 40.0% | |
| ACGTCATCTTCAAGACCATT+AGG | - | tig0019346:1637-1656 | Msa1373060:CDS | 40.0% | |
| !! | ACCATTAGGTGATGCTGTTT+TGG | - | tig0019346:1651-1670 | Msa1373060:CDS | 40.0% |
| TCCAAAACAGCATCACCTAA+TGG | + | tig0019346:1655-1674 | Msa1373060:intergenic | 40.0% | |
| !!! | TTAGGTGATGCTGTTTTGGA+TGG | - | tig0019346:1655-1674 | Msa1373060:CDS | 40.0% |
| AACCATTAAGTGCTCTTGCA+AGG | + | tig0019346:1723-1742 | Msa1373060:intergenic | 40.0% | |
| CTGAATCCAAATGAGCATCA+GGG | + | tig0019346:1795-1814 | Msa1373060:intergenic | 40.0% | |
| ACTGAATCCAAATGAGCATC+AGG | + | tig0019346:1796-1815 | Msa1373060:intergenic | 40.0% | |
| ATTCAGTGCCAATACTCAAG+TGG | - | tig0019346:1809-1828 | Msa1373060:CDS | 40.0% | |
| TGAGAGTTCAAAACATCAGC+AGG | + | tig0019346:1947-1966 | Msa1373060:intergenic | 40.0% | |
| !! | TGCTGATGTTTTGAACTCTC+AGG | - | tig0019346:1946-1965 | Msa1373060:CDS | 40.0% |
| AAGGGTTCTGCTAAATATGG+TGG | - | tig0019346:1983-2002 | Msa1373060:CDS | 40.0% | |
| ACGCCGAACCTTTCTTAAAT+AGG | - | tig0019346:2409-2428 | Msa1373060:intron | 40.0% | |
| AGGCCTGACCTATTTAAGAA+AGG | + | tig0019346:2420-2439 | Msa1373060:intergenic | 40.0% | |
| AGGGAACAATGACAGAACAA+AGG | - | tig0019346:3266-3285 | Msa1373060:intron | 40.0% | |
| CAATGACAGAACAAAGGACT+AGG | - | tig0019346:3272-3291 | Msa1373060:intron | 40.0% | |
| ACAGAACAAAGGACTAGGTT+TGG | - | tig0019346:3277-3296 | Msa1373060:intron | 40.0% | |
| !! | ATTTACCTAACGGTGTCGTT+TGG | - | tig0019346:3500-3519 | Msa1373060:intron | 40.0% |
| ATCGTGATCCAATTCACATG+TGG | - | tig0019346:3969-3988 | Msa1373060:intron | 40.0% | |
| AAACAGAGCCACATGTGAAT+TGG | + | tig0019346:3980-3999 | Msa1373060:intergenic | 40.0% | |
| ! | AATTCACATGTGGCTCTGTT+TGG | - | tig0019346:3979-3998 | Msa1373060:intron | 40.0% |
| AGCAGATAGCTTATAGCTGA+TGG | + | tig0019346:4822-4841 | Msa1373060:intergenic | 40.0% | |
| TGGTGGCATAGCAATCTATT+GGG | - | tig0019346:5521-5540 | Msa1373060:intron | 40.0% | |
| ! | GACCGTTACCGAATTTGTTT+AGG | + | tig0019346:5620-5639 | Msa1373060:intergenic | 40.0% |
| GTGCATGAATTTGGAAGTGA+TGG | + | tig0019346:5678-5697 | Msa1373060:intergenic | 40.0% | |
| !! | CTTTCAATTGGTGGTGGAAT+TGG | - | tig0019346:5750-5769 | Msa1373060:intron | 40.0% |
| TTATGGAACACTTTCTTGGG+TGG | - | tig0019346:5822-5841 | Msa1373060:intron | 40.0% | |
| AACTTGGTTCCACCGAAAAT+TGG | - | tig0019346:5904-5923 | Msa1373060:intron | 40.0% | |
| !!! | TGCAAGGTGTTGCCAATTTT+CGG | + | tig0019346:5919-5938 | Msa1373060:intergenic | 40.0% |
| ! | CACCTTGCAGGTTTTCTTAA+AGG | - | tig0019346:5930-5949 | Msa1373060:intron | 40.0% |
| ! | ACCCTTTAAGAAAACCTGCA+AGG | + | tig0019346:5935-5954 | Msa1373060:intergenic | 40.0% |
| GCAGTGCCCAAAAATTTATC+TGG | + | tig0019346:6011-6030 | Msa1373060:intergenic | 40.0% | |
| CCTAAAAATATCTTCCCAGC+TGG | + | tig0019346:6152-6171 | Msa1373060:intergenic | 40.0% | |
| ! | CCAGCTGGGAAGATATTTTT+AGG | - | tig0019346:6149-6168 | Msa1373060:intron | 40.0% |
| !!! | GAAGATATTTTTAGGGCTGC+CGG | - | tig0019346:6157-6176 | Msa1373060:intron | 40.0% |
| ! | AGGTTTCATGATTTGCAGAC+TGG | - | tig0019346:6290-6309 | Msa1373060:intron | 40.0% |
| ! | GGTTTCATGATTTGCAGACT+GGG | - | tig0019346:6291-6310 | Msa1373060:intron | 40.0% |
| AATCCATTTGCGCACAATTG+GGG | + | tig0019346:6443-6462 | Msa1373060:intergenic | 40.0% | |
| !! | ATGGATTATCCACTTTTGGG+TGG | - | tig0019346:6456-6475 | Msa1373060:intron | 40.0% |
| GGTCAAAATAAGTGGTACAC+CGG | + | tig0019346:6514-6533 | Msa1373060:intergenic | 40.0% | |
| TAATAGGGTTAGAGAGAGTG+TGG | - | tig0019346:6580-6599 | Msa1373060:intron | 40.0% | |
| GTGTAGTTGGGCAATTTAGT+TGG | + | tig0019346:6741-6760 | Msa1373060:intergenic | 40.0% | |
| AATGTCACACAAGTCCAATC+CGG | + | tig0019346:6772-6791 | Msa1373060:intergenic | 40.0% | |
| TGTCACGGTGACATTAAATC+TGG | - | tig0019346:6793-6812 | Msa1373060:intron | 40.0% | |
| GTCACGGTGACATTAAATCT+GGG | - | tig0019346:6794-6813 | Msa1373060:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | - | tig0019346:6805-6824 | Msa1373060:intron | 40.0% | |
| CACAACACATACAACACATC+TGG | + | tig0019346:6847-6866 | Msa1373060:intergenic | 40.0% | |
| GATGTGTTGTATGTGTTGTG+TGG | - | tig0019346:6847-6866 | Msa1373060:intron | 40.0% | |
| CACACTGTCACACAATATCT+GGG | + | tig0019346:6873-6892 | Msa1373060:intergenic | 40.0% | |
| ACACACTGTCACACAATATC+TGG | + | tig0019346:6874-6893 | Msa1373060:intergenic | 40.0% | |
| GTCACGGTGACATTAAATCT+AGG | + | tig0019346:6794-6813 | Msa1373060:intergenic | 40.0% | |
| GTGAGTATATGGGGAGTTAT+GGG | + | tig0019346:6950-6969 | Msa1373060:intergenic | 40.0% | |
| GTTATGCACTCTACAAGCTA+CGG | - | tig0019346:7267-7286 | Msa1373060:intron | 40.0% | |
| TTATGCACTCTACAAGCTAC+GGG | - | tig0019346:7268-7287 | Msa1373060:intron | 40.0% | |
| TACAAGCTACGGGTATTTGA+TGG | - | tig0019346:7278-7297 | Msa1373060:intron | 40.0% | |
| !! | TTTTCTATTGGTGGCTTACG+TGG | + | tig0019346:7679-7698 | Msa1373060:intergenic | 40.0% |
| ! | AAGACTCTGAAAAGGTCAGA+GGG | + | tig0019346:4981-5000 | Msa1373060:intergenic | 40.0% |
| TTAGTTGAAGGTTAGGGCAA+AGG | + | tig0019346:8293-8312 | Msa1373060:intergenic | 40.0% | |
| !! | AAAAATGACGGTAGTGGGAA+AGG | - | tig0019346:8390-8409 | Msa1373060:intron | 40.0% |
| TGGTGGCATAGCAATCTATT+GGG | - | tig0019346:5521-5540 | Msa1373060:intron | 40.0% | |
| ! | GACCGTTACCGAATTTGTTT+AGG | + | tig0019346:5620-5639 | Msa1373060:intergenic | 40.0% |
| GTGCATGAATTTGGAAGTGA+TGG | + | tig0019346:5678-5697 | Msa1373060:intergenic | 40.0% | |
| !! | CTTTCAATTGGTGGTGGAAT+TGG | - | tig0019346:5750-5769 | Msa1373060:intron | 40.0% |
| TTATGGAACACTTTCTTGGG+TGG | - | tig0019346:5822-5841 | Msa1373060:intron | 40.0% | |
| AACTTGGTTCCACCGAAAAT+TGG | - | tig0019346:5904-5923 | Msa1373060:intron | 40.0% | |
| !!! | TGCAAGGTGTTGCCAATTTT+CGG | + | tig0019346:5919-5938 | Msa1373060:intergenic | 40.0% |
| ! | CACCTTGCAGGTTTTCTTAA+AGG | - | tig0019346:5930-5949 | Msa1373060:intron | 40.0% |
| ! | ACCCTTTAAGAAAACCTGCA+AGG | + | tig0019346:5935-5954 | Msa1373060:intergenic | 40.0% |
| GCAGTGCCCAAAAATTTATC+TGG | + | tig0019346:6011-6030 | Msa1373060:intergenic | 40.0% | |
| CCTAAAAATATCTTCCCAGC+TGG | + | tig0019346:6152-6171 | Msa1373060:intergenic | 40.0% | |
| ! | CCAGCTGGGAAGATATTTTT+AGG | - | tig0019346:6149-6168 | Msa1373060:intron | 40.0% |
| !!! | GAAGATATTTTTAGGGCTGC+CGG | - | tig0019346:6157-6176 | Msa1373060:intron | 40.0% |
| ! | AGGTTTCATGATTTGCAGAC+TGG | - | tig0019346:6290-6309 | Msa1373060:intron | 40.0% |
| ! | GGTTTCATGATTTGCAGACT+GGG | - | tig0019346:6291-6310 | Msa1373060:intron | 40.0% |
| TGGGGCCAAAATGGAAATGA+AGG | - | tig0019346:1334-1353 | Msa1373060:CDS | 45.0% | |
| TGTGTTGCAAGCATCTGCTA+AGG | + | tig0019346:1362-1381 | Msa1373060:intergenic | 45.0% | |
| ! | CAAGGTTTAGAGTTGGGGTT+TGG | + | tig0019346:1435-1454 | Msa1373060:intergenic | 45.0% |
| CATTGTGATCCAGCCTCAAA+CGG | - | tig0019346:1460-1479 | Msa1373060:CDS | 45.0% | |
| TGAGGAAAGAGAGTAGCTTC+CGG | + | tig0019346:1563-1582 | Msa1373060:intergenic | 45.0% | |
| !! | GACCTTGCAAGAGCACTTAA+TGG | - | tig0019346:1718-1737 | Msa1373060:CDS | 45.0% |
| TCCTTACCCTGATGCTCATT+TGG | - | tig0019346:1786-1805 | Msa1373060:CDS | 45.0% | |
| TCCAAATGAGCATCAGGGTA+AGG | + | tig0019346:1790-1809 | Msa1373060:intergenic | 45.0% | |
| GCAGGAATAAAACCACCACT+TGG | + | tig0019346:1929-1948 | Msa1373060:intergenic | 45.0% | |
| TCAGGTTCTTCCTGCTATCA+AGG | - | tig0019346:1964-1983 | Msa1373060:CDS | 45.0% | |
| CAGGTTCTTCCTGCTATCAA+GGG | - | tig0019346:1965-1984 | Msa1373060:CDS | 45.0% | |
| ! | TTAGCAGAACCCTTGATAGC+AGG | + | tig0019346:1977-1996 | Msa1373060:intergenic | 45.0% |
| ACACAAAAATTGGGTCGCAC+AGG | - | tig0019346:2372-2391 | Msa1373060:intron | 45.0% | |
| CACAAAAATTGGGTCGCACA+GGG | - | tig0019346:2373-2392 | Msa1373060:intron | 45.0% | |
| ACAAAAATTGGGTCGCACAG+GGG | - | tig0019346:2374-2393 | Msa1373060:intron | 45.0% | |
| !! | GCCTTTTTAAAAGCACGGTC+TGG | - | tig0019346:2507-2526 | Msa1373060:intron | 45.0% |
| !! | GCCAGACCGTGCTTTTAAAA+AGG | + | tig0019346:2511-2530 | Msa1373060:intergenic | 45.0% |
| ! | ATCACTGACTGCATACAACC+AGG | - | tig0019346:3312-3331 | Msa1373060:intron | 45.0% |
| ! | TCACTGACTGCATACAACCA+GGG | - | tig0019346:3313-3332 | Msa1373060:intron | 45.0% |
| ACATTCCAAACGACACCGTT+AGG | + | tig0019346:3508-3527 | Msa1373060:intergenic | 45.0% | |
| GCAAAGGAGCTCAACCAAAA+TGG | + | tig0019346:3816-3835 | Msa1373060:intergenic | 45.0% | |
| TTCTGATTGTATGCAGGGCA+GGG | + | tig0019346:3860-3879 | Msa1373060:intergenic | 45.0% | |
| ATTCTGATTGTATGCAGGGC+AGG | + | tig0019346:3861-3880 | Msa1373060:intergenic | 45.0% | |
| ! | GAAGACTCTGAAAAGGTCAG+AGG | + | tig0019346:4982-5001 | Msa1373060:intergenic | 45.0% |
| GCAACAAGAGTGAGGAATAG+AGG | + | tig0019346:5489-5508 | Msa1373060:intergenic | 45.0% | |
| CTGGTGGCATAGCAATCTAT+TGG | - | tig0019346:5520-5539 | Msa1373060:intron | 45.0% | |
| GGTGGCATAGCAATCTATTG+GGG | - | tig0019346:5522-5541 | Msa1373060:intron | 45.0% | |
| GCAATCTATTGGGGCCAAAA+TGG | - | tig0019346:5531-5550 | Msa1373060:intron | 45.0% | |
| !! | AGGTTCCTTCGTTGCCATTT+TGG | + | tig0019346:5548-5567 | Msa1373060:intergenic | 45.0% |
| ACCTGCGAGATTCATTTCAG+GGG | + | tig0019346:5646-5665 | Msa1373060:intergenic | 45.0% | |
| GACCTGCGAGATTCATTTCA+GGG | + | tig0019346:5647-5666 | Msa1373060:intergenic | 45.0% | |
| TGACCTGCGAGATTCATTTC+AGG | + | tig0019346:5648-5667 | Msa1373060:intergenic | 45.0% | |
| !!! | AAGGTGTTGCCAATTTTCGG+TGG | + | tig0019346:5916-5935 | Msa1373060:intergenic | 45.0% |
| GAAAATTGGCAACACCTTGC+AGG | - | tig0019346:5918-5937 | Msa1373060:intron | 45.0% | |
| TGCCGGAATAAAACCACTTC+CGG | + | tig0019346:6198-6217 | Msa1373060:intergenic | 45.0% | |
| ! | TCTGAAGTCAACACATCTGC+CGG | + | tig0019346:6215-6234 | Msa1373060:intergenic | 45.0% |
| AGTATGGAGGAGTGATGCTT+TGG | - | tig0019346:6264-6283 | Msa1373060:intron | 45.0% | |
| TATCCCCAATTGTGCGCAAA+TGG | - | tig0019346:6437-6456 | Msa1373060:intron | 45.0% | |
| !! | TCCACTTTTGGGTGGATTCT+AGG | - | tig0019346:6464-6483 | Msa1373060:intron | 45.0% |
| !! | CCACTTTTGGGTGGATTCTA+GGG | - | tig0019346:6465-6484 | Msa1373060:intron | 45.0% |
| GGTTCAATTAAGTGCCTCAC+CGG | - | tig0019346:6492-6511 | Msa1373060:intron | 45.0% | |
| AAATAAGTGGTACACCGGTG+AGG | + | tig0019346:6509-6528 | Msa1373060:intergenic | 45.0% | |
| CCGGAGTTATGTGTGTAGTT+GGG | + | tig0019346:6753-6772 | Msa1373060:intergenic | 45.0% | |
| CCCAACTACACACATAACTC+CGG | - | tig0019346:6750-6769 | Msa1373060:intron | 45.0% | |
| TCCGGAGTTATGTGTGTAGT+TGG | + | tig0019346:6754-6773 | Msa1373060:intergenic | 45.0% | |
| CTACACACATAACTCCGGAT+TGG | - | tig0019346:6755-6774 | Msa1373060:intron | 45.0% | |
| GGTGAGTATATGGGGAGTTA+TGG | + | tig0019346:6951-6970 | Msa1373060:intergenic | 45.0% | |
| ! | GAAGACTCTGAAAAGGTCAG+AGG | + | tig0019346:4982-5001 | Msa1373060:intergenic | 45.0% |
| CTGGTGGCATAGCAATCTAT+TGG | - | tig0019346:5520-5539 | Msa1373060:intron | 45.0% | |
| GGTGGCATAGCAATCTATTG+GGG | - | tig0019346:5522-5541 | Msa1373060:intron | 45.0% | |
| GCAATCTATTGGGGCCAAAA+TGG | - | tig0019346:5531-5550 | Msa1373060:intron | 45.0% | |
| !! | AGGTTCCTTCGTTGCCATTT+TGG | + | tig0019346:5548-5567 | Msa1373060:intergenic | 45.0% |
| ACCTGCGAGATTCATTTCAG+GGG | + | tig0019346:5646-5665 | Msa1373060:intergenic | 45.0% | |
| GACCTGCGAGATTCATTTCA+GGG | + | tig0019346:5647-5666 | Msa1373060:intergenic | 45.0% | |
| TGACCTGCGAGATTCATTTC+AGG | + | tig0019346:5648-5667 | Msa1373060:intergenic | 45.0% | |
| !!! | AAGGTGTTGCCAATTTTCGG+TGG | + | tig0019346:5916-5935 | Msa1373060:intergenic | 45.0% |
| GAAAATTGGCAACACCTTGC+AGG | - | tig0019346:5918-5937 | Msa1373060:intron | 45.0% | |
| TGCCGGAATAAAACCACTTC+CGG | + | tig0019346:6198-6217 | Msa1373060:intergenic | 45.0% | |
| ! | TCTGAAGTCAACACATCTGC+CGG | + | tig0019346:6215-6234 | Msa1373060:intergenic | 45.0% |
| AGTATGGAGGAGTGATGCTT+TGG | - | tig0019346:6264-6283 | Msa1373060:intron | 45.0% | |
| !!! | AATTTTTTTTAATACAAATT+AGG | + | tig0019346:2553-2572 | Msa1373060:intergenic | 5.0% |
| !!! | CTATTATATTAATAAATTTT+TGG | + | tig0019346:2983-3002 | Msa1373060:intergenic | 5.0% |
| !!! | TTATTTTTTATTTTTTTCTT+GGG | + | tig0019346:3720-3739 | Msa1373060:intergenic | 5.0% |
| !!! | TTTAAAACAATTTTTTTTTT+TGG | + | tig0019346:3943-3962 | Msa1373060:intergenic | 5.0% |
| !!! | TTTATATAAAAATGTAATTT+TGG | + | tig0019346:7045-7064 | Msa1373060:intergenic | 5.0% |
| !! | TATTTAAATAAAATTAAAAC+TGG | + | tig0019346:7755-7774 | Msa1373060:intergenic | 5.0% |
| !!! | TTTAATTTTATTTAAATAGA+CGG | - | tig0019346:7757-7776 | Msa1373060:intron | 5.0% |
| GCTGTCTATTGGGGCCAAAA+TGG | - | tig0019346:1325-1344 | Msa1373060:CDS | 50.0% | |
| GGTTTGGCCATTGCCAAAAG+TGG | + | tig0019346:1419-1438 | Msa1373060:intergenic | 50.0% | |
| ACCCCAACTCTAAACCTTGC+TGG | - | tig0019346:1436-1455 | Msa1373060:CDS | 50.0% | |
| ! | GCCAGCAAGGTTTAGAGTTG+GGG | + | tig0019346:1440-1459 | Msa1373060:intergenic | 50.0% |
| ! | GGCCAGCAAGGTTTAGAGTT+GGG | + | tig0019346:1441-1460 | Msa1373060:intergenic | 50.0% |
| ! | TGGCCAGCAAGGTTTAGAGT+TGG | + | tig0019346:1442-1461 | Msa1373060:intergenic | 50.0% |
| ! | CGTTTGAGGCTGGATCACAA+TGG | + | tig0019346:1462-1481 | Msa1373060:intergenic | 50.0% |
| ! | TTTGTGCAACCGTTTGAGGC+TGG | + | tig0019346:1472-1491 | Msa1373060:intergenic | 50.0% |
| !! | AAAGTGTTGCTCTCTCTCGG+AGG | - | tig0019346:1532-1551 | Msa1373060:CDS | 50.0% |
| GCATCAGGGTAAGGACATTG+AGG | + | tig0019346:1781-1800 | Msa1373060:intergenic | 50.0% | |
| AATGATGCTGCTGCTCCAAG+TGG | - | tig0019346:1911-1930 | Msa1373060:CDS | 50.0% | |
| GAATGTCACTCCTACGTCGT+GGG | - | tig0019346:3522-3541 | Msa1373060:intron | 50.0% | |
| TCTGATTGTATGCAGGGCAG+GGG | + | tig0019346:3859-3878 | Msa1373060:intergenic | 50.0% | |
| GGGAAGTTGCAACAAGAGTG+AGG | + | tig0019346:5497-5516 | Msa1373060:intergenic | 50.0% | |
| CTTGTTGCAACTTCCCATGC+TGG | - | tig0019346:5501-5520 | Msa1373060:intron | 50.0% | |
| GATTGCTATGCCACCAGCAT+GGG | + | tig0019346:5517-5536 | Msa1373060:intergenic | 50.0% | |
| AGATTGCTATGCCACCAGCA+TGG | + | tig0019346:5518-5537 | Msa1373060:intergenic | 50.0% | |
| TTATCCGAAGCATGCGCAAC+CGG | - | tig0019346:5567-5586 | Msa1373060:intron | 50.0% | |
| ! | TTTTCCGGTTGCGCATGCTT+CGG | + | tig0019346:5574-5593 | Msa1373060:intergenic | 50.0% |
| ACCCCTGAAATGAATCTCGC+AGG | - | tig0019346:5642-5661 | Msa1373060:intron | 50.0% | |
| ! | TTGGGCACTGCACTTGAAAC+AGG | - | tig0019346:6020-6039 | Msa1373060:intron | 50.0% |
| !!! | GGCCGGAAGTGGTTTTATTC+CGG | - | tig0019346:6193-6212 | Msa1373060:intron | 50.0% |
| GAGGAGTGATGCTTTGGTCA+AGG | - | tig0019346:6270-6289 | Msa1373060:intron | 50.0% | |
| CCCTAGAATCCACCCAAAAG+TGG | + | tig0019346:6468-6487 | Msa1373060:intergenic | 50.0% | |
| !! | TTTGGGTGGATTCTAGGGTG+AGG | - | tig0019346:6470-6489 | Msa1373060:intron | 50.0% |
| !! | TTGGGTGGATTCTAGGGTGA+GGG | - | tig0019346:6471-6490 | Msa1373060:intron | 50.0% |
| AAATCTGGGCCACACAAAGG+TGG | - | tig0019346:6808-6827 | Msa1373060:intron | 50.0% | |
| CACAACACACCACCTTTGTG+TGG | + | tig0019346:6820-6839 | Msa1373060:intergenic | 50.0% | |
| CACAAAGGTGGTGTGTTGTG+TGG | - | tig0019346:6820-6839 | Msa1373060:intron | 50.0% | |
| GTGTGACAGTGTGTGTTGTG+TGG | - | tig0019346:6880-6899 | Msa1373060:intron | 50.0% | |
| ! | CTATTGGTGGCTTACGTGGA+GGG | + | tig0019346:7675-7694 | Msa1373060:intergenic | 50.0% |
| ! | TCTATTGGTGGCTTACGTGG+AGG | + | tig0019346:7676-7695 | Msa1373060:intergenic | 50.0% |
| GAAGGTTAGGGCAAAGGAAG+CGG | + | tig0019346:8287-8306 | Msa1373060:intergenic | 50.0% | |
| ! | CGGTTGATTCCCATTTGCCA+AGG | + | tig0019346:8453-8472 | Msa1373060:intergenic | 50.0% |
| GGGAAGTTGCAACAAGAGTG+AGG | + | tig0019346:5497-5516 | Msa1373060:intergenic | 50.0% | |
| CTTGTTGCAACTTCCCATGC+TGG | - | tig0019346:5501-5520 | Msa1373060:intron | 50.0% | |
| GATTGCTATGCCACCAGCAT+GGG | + | tig0019346:5517-5536 | Msa1373060:intergenic | 50.0% | |
| AGATTGCTATGCCACCAGCA+TGG | + | tig0019346:5518-5537 | Msa1373060:intergenic | 50.0% | |
| TTATCCGAAGCATGCGCAAC+CGG | - | tig0019346:5567-5586 | Msa1373060:intron | 50.0% | |
| ! | TTTTCCGGTTGCGCATGCTT+CGG | + | tig0019346:5574-5593 | Msa1373060:intergenic | 50.0% |
| ACCCCTGAAATGAATCTCGC+AGG | - | tig0019346:5642-5661 | Msa1373060:intron | 50.0% | |
| ! | TTGGGCACTGCACTTGAAAC+AGG | - | tig0019346:6020-6039 | Msa1373060:intron | 50.0% |
| !!! | GGCCGGAAGTGGTTTTATTC+CGG | - | tig0019346:6193-6212 | Msa1373060:intron | 50.0% |
| GAGGAGTGATGCTTTGGTCA+AGG | - | tig0019346:6270-6289 | Msa1373060:intron | 50.0% | |
| CTGGATCACAATGGCCAGCA+AGG | + | tig0019346:1453-1472 | Msa1373060:intergenic | 55.0% | |
| CTGTGTGGCATCATCAGCTG+AGG | + | tig0019346:1581-1600 | Msa1373060:intergenic | 55.0% | |
| ! | CTCAGCTGATGATGCCACAC+AGG | - | tig0019346:1579-1598 | Msa1373060:CDS | 55.0% |
| GGAGCAGCAGCATCATTAGC+AGG | + | tig0019346:1908-1927 | Msa1373060:intergenic | 55.0% | |
| AAAATTGGGTCGCACAGGGG+TGG | - | tig0019346:2377-2396 | Msa1373060:intron | 55.0% | |
| AAATTGGGTCGCACAGGGGT+GGG | - | tig0019346:2378-2397 | Msa1373060:intron | 55.0% | |
| GGAATGTCACTCCTACGTCG+TGG | - | tig0019346:3521-3540 | Msa1373060:intron | 55.0% | |
| TCACTCCTACGTCGTGGGAA+AGG | - | tig0019346:3527-3546 | Msa1373060:intron | 55.0% | |
| CACTCCTACGTCGTGGGAAA+GGG | - | tig0019346:3528-3547 | Msa1373060:intron | 55.0% | |
| ACTCCTACGTCGTGGGAAAG+GGG | - | tig0019346:3529-3548 | Msa1373060:intron | 55.0% | |
| TTTCCCCTTTCCCACGACGT+AGG | + | tig0019346:3535-3554 | Msa1373060:intergenic | 55.0% | |
| GTTGCAACTTCCCATGCTGG+TGG | - | tig0019346:5504-5523 | Msa1373060:intron | 55.0% | |
| TGGGGCCAAAATGGCAACGA+AGG | - | tig0019346:5540-5559 | Msa1373060:intron | 55.0% | |
| GGTTGCGCATGCTTCGGATA+AGG | + | tig0019346:5568-5587 | Msa1373060:intergenic | 55.0% | |
| !! | TGGACTAGCACTGTTCCAGC+TGG | - | tig0019346:6134-6153 | Msa1373060:intron | 55.0% |
| ! | GGACTAGCACTGTTCCAGCT+GGG | - | tig0019346:6135-6154 | Msa1373060:intron | 55.0% |
| GCAAAGGAAGCGGTGGAGAT+GGG | + | tig0019346:8277-8296 | Msa1373060:intergenic | 55.0% | |
| GTTGCAACTTCCCATGCTGG+TGG | - | tig0019346:5504-5523 | Msa1373060:intron | 55.0% | |
| TGGGGCCAAAATGGCAACGA+AGG | - | tig0019346:5540-5559 | Msa1373060:intron | 55.0% | |
| GGTTGCGCATGCTTCGGATA+AGG | + | tig0019346:5568-5587 | Msa1373060:intergenic | 55.0% | |
| !! | TGGACTAGCACTGTTCCAGC+TGG | - | tig0019346:6134-6153 | Msa1373060:intron | 55.0% |
| ! | GGACTAGCACTGTTCCAGCT+GGG | - | tig0019346:6135-6154 | Msa1373060:intron | 55.0% |
| ! | GTGTTGCTCTCTCTCGGAGG+TGG | - | tig0019346:1535-1554 | Msa1373060:CDS | 60.0% |
| GATGCTGCTGCTCCAAGTGG+TGG | - | tig0019346:1914-1933 | Msa1373060:CDS | 60.0% | |
| GGCAAAGGAAGCGGTGGAGA+TGG | + | tig0019346:8278-8297 | Msa1373060:intergenic | 60.0% | |
| GGTTAGGGCAAAGGAAGCGG+TGG | + | tig0019346:8284-8303 | Msa1373060:intergenic | 60.0% | |
| CTCTCTCTCGGAGGTGGTGC+CGG | - | tig0019346:1541-1560 | Msa1373060:CDS | 65.0% | |
| GGTCGCACAGGGGTGGGAAT+AGG | - | tig0019346:2384-2403 | Msa1373060:intron | 65.0% | |
| TCCTTTGCTCTCGCCTGCCC+TGG | - | tig0019346:3828-3847 | Msa1373060:intron | 65.0% | |
| CCTTTGCTCTCGCCTGCCCT+GGG | - | tig0019346:3829-3848 | Msa1373060:intron | 65.0% | |
| AGGGCTGCCGGCATCTACAG+CGG | - | tig0019346:6169-6188 | Msa1373060:intron | 65.0% | |
| AGGGCTGCCGGCATCTACAG+CGG | - | tig0019346:6169-6188 | Msa1373060:intron | 65.0% | |
| CCCAGGGCAGGCGAGAGCAA+AGG | + | tig0019346:3832-3851 | Msa1373060:intergenic | 70.0% | |
| GCAGGGCAGGGGAAGTCCCA+GGG | + | tig0019346:3848-3867 | Msa1373060:intergenic | 70.0% | |
| TGCAGGGCAGGGGAAGTCCC+AGG | + | tig0019346:3849-3868 | Msa1373060:intergenic | 70.0% | |
| GCTGCCGGCATCTACAGCGG+CGG | - | tig0019346:6172-6191 | Msa1373060:intron | 70.0% | |
| TCTACAGCGGCGGCCGGAAG+TGG | - | tig0019346:6182-6201 | Msa1373060:intron | 70.0% | |
| GCTGCCGGCATCTACAGCGG+CGG | - | tig0019346:6172-6191 | Msa1373060:intron | 70.0% | |
| TCTACAGCGGCGGCCGGAAG+TGG | - | tig0019346:6182-6201 | Msa1373060:intron | 70.0% | |
| GGCAGGGGAAGTCCCAGGGC+AGG | + | tig0019346:3844-3863 | Msa1373060:intergenic | 75.0% | |
| CCGGCCGCCGCTGTAGATGC+CGG | + | tig0019346:6179-6198 | Msa1373060:intergenic | 75.0% | |
| CCGGCATCTACAGCGGCGGC+CGG | - | tig0019346:6176-6195 | Msa1373060:intron | 75.0% | |
| CCGGCCGCCGCTGTAGATGC+CGG | + | tig0019346:6179-6198 | Msa1373060:intergenic | 75.0% | |
| CCGGCATCTACAGCGGCGGC+CGG | - | tig0019346:6176-6195 | Msa1373060:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019346 | gene | 1322 | 9469 | 1322 | ID=Msa1373060;Name=Msa1373060 |
| tig0019346 | mRNA | 1322 | 9469 | 1322 | ID=Msa1373060-mRNA-1;Parent=Msa1373060;Name=Msa1373060-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|0|0|4|0|511 |
| tig0019346 | exon | 9300 | 9469 | 9300 | ID=Msa1373060-mRNA-1:exon:3077;Parent=Msa1373060-mRNA-1 |
| tig0019346 | exon | 9052 | 9290 | 9052 | ID=Msa1373060-mRNA-1:exon:3076;Parent=Msa1373060-mRNA-1 |
| tig0019346 | exon | 4517 | 4749 | 4517 | ID=Msa1373060-mRNA-1:exon:3075;Parent=Msa1373060-mRNA-1 |
| tig0019346 | exon | 1322 | 2212 | 1322 | ID=Msa1373060-mRNA-1:exon:3074;Parent=Msa1373060-mRNA-1 |
| tig0019346 | CDS | 9300 | 9469 | 9300 | ID=Msa1373060-mRNA-1:cds;Parent=Msa1373060-mRNA-1 |
| tig0019346 | CDS | 9052 | 9290 | 9052 | ID=Msa1373060-mRNA-1:cds;Parent=Msa1373060-mRNA-1 |
| tig0019346 | CDS | 4517 | 4749 | 4517 | ID=Msa1373060-mRNA-1:cds;Parent=Msa1373060-mRNA-1 |
| tig0019346 | CDS | 1322 | 2212 | 1322 | ID=Msa1373060-mRNA-1:cds;Parent=Msa1373060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
