Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224510 | XP_039689563.1 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 670 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224510 | sp|F4JVA9|SFH2_ARATH | 32.340 | 235 | 139 | 5 | 34 | 254 | 97 | 325 | 1.00e-21 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa1224510 | 0.859253 | 4.699407e-63 | -8.615850e-47 |
| Msa0030800 | Msa1224510 | 0.831504 | 1.608123e-55 | -8.615850e-47 |
| Msa0034540 | Msa1224510 | 0.806399 | 8.381874e-50 | -8.615850e-47 |
| Msa0035790 | Msa1224510 | 0.807580 | 4.714818e-50 | -8.615850e-47 |
| Msa0046680 | Msa1224510 | 0.814645 | 1.386162e-51 | -8.615850e-47 |
| Msa0051480 | Msa1224510 | 0.867580 | 1.232163e-65 | -8.615850e-47 |
| Msa0051620 | Msa1224510 | 0.858476 | 8.024029e-63 | -8.615850e-47 |
| Msa0051730 | Msa1224510 | 0.856280 | 3.578367e-62 | -8.615850e-47 |
| Msa0071470 | Msa1224510 | 0.817159 | 3.810194e-52 | -8.615850e-47 |
| Msa0078210 | Msa1224510 | 0.825496 | 4.541053e-54 | -8.615850e-47 |
| Msa0083890 | Msa1224510 | 0.832679 | 8.238194e-56 | -8.615850e-47 |
| Msa0086360 | Msa1224510 | 0.852866 | 3.483802e-61 | -8.615850e-47 |
| Msa0089890 | Msa1224510 | 0.834071 | 3.704251e-56 | -8.615850e-47 |
| Msa0606340 | Msa1224510 | -0.816346 | 5.799599e-52 | -8.615850e-47 |
| Msa0608280 | Msa1224510 | -0.802886 | 4.535212e-49 | -8.615850e-47 |
| Msa0631130 | Msa1224510 | 0.804169 | 2.457711e-49 | -8.615850e-47 |
| Msa0645480 | Msa1224510 | 0.834555 | 2.801343e-56 | -8.615850e-47 |
| Msa0650560 | Msa1224510 | 0.801297 | 9.623674e-49 | -8.615850e-47 |
| Msa0657340 | Msa1224510 | 0.801112 | 1.050166e-48 | -8.615850e-47 |
| Msa0675590 | Msa1224510 | 0.800537 | 1.375829e-48 | -8.615850e-47 |
| Msa0690100 | Msa1224510 | -0.818086 | 2.355405e-52 | -8.615850e-47 |
| Msa0699800 | Msa1224510 | 0.817155 | 3.818844e-52 | -8.615850e-47 |
| Msa0701490 | Msa1224510 | 0.811156 | 8.060206e-51 | -8.615850e-47 |
| Msa0701560 | Msa1224510 | 0.809616 | 1.733003e-50 | -8.615850e-47 |
| Msa0704560 | Msa1224510 | 0.816124 | 6.500274e-52 | -8.615850e-47 |
| Msa0716620 | Msa1224510 | 0.805584 | 1.243890e-49 | -8.615850e-47 |
| Msa0740630 | Msa1224510 | 0.858631 | 7.217725e-63 | -8.615850e-47 |
| Msa0744540 | Msa1224510 | 0.826488 | 2.640017e-54 | -8.615850e-47 |
| Msa0744550 | Msa1224510 | 0.858073 | 1.057731e-62 | -8.615850e-47 |
| Msa0744560 | Msa1224510 | 0.872132 | 4.020871e-67 | -8.615850e-47 |
| Msa0746340 | Msa1224510 | 0.995640 | 2.489648e-218 | -8.615850e-47 |
| Msa0781210 | Msa1224510 | 0.823053 | 1.703994e-53 | -8.615850e-47 |
| Msa0793270 | Msa1224510 | 0.815943 | 7.134183e-52 | -8.615850e-47 |
| Msa0795320 | Msa1224510 | 0.840398 | 8.905721e-58 | -8.615850e-47 |
| Msa0804870 | Msa1224510 | 0.829795 | 4.215061e-55 | -8.615850e-47 |
| Msa0816630 | Msa1224510 | 0.825379 | 4.841067e-54 | -8.615850e-47 |
| Msa0820880 | Msa1224510 | 0.860482 | 2.002430e-63 | -8.615850e-47 |
| Msa0826360 | Msa1224510 | 0.838253 | 3.209858e-57 | -8.615850e-47 |
| Msa0826370 | Msa1224510 | 0.858053 | 1.072798e-62 | -8.615850e-47 |
| Msa0826380 | Msa1224510 | 0.844480 | 7.366861e-59 | -8.615850e-47 |
| Msa0826450 | Msa1224510 | 0.855842 | 4.808987e-62 | -8.615850e-47 |
| Msa0832950 | Msa1224510 | 0.816843 | 4.487556e-52 | -8.615850e-47 |
| Msa0129290 | Msa1224510 | 0.800417 | 1.455296e-48 | -8.615850e-47 |
| Msa0136240 | Msa1224510 | 0.830760 | 2.449134e-55 | -8.615850e-47 |
| Msa0143640 | Msa1224510 | 0.865750 | 4.709076e-65 | -8.615850e-47 |
| Msa0143830 | Msa1224510 | 0.828843 | 7.177588e-55 | -8.615850e-47 |
| Msa0146090 | Msa1224510 | 0.844643 | 6.657707e-59 | -8.615850e-47 |
| Msa0146200 | Msa1224510 | 0.866734 | 2.295861e-65 | -8.615850e-47 |
| Msa0150620 | Msa1224510 | 0.811316 | 7.440233e-51 | -8.615850e-47 |
| Msa0162680 | Msa1224510 | 0.843085 | 1.740888e-58 | -8.615850e-47 |
| Msa0185100 | Msa1224510 | 0.808331 | 3.264083e-50 | -8.615850e-47 |
| Msa0191470 | Msa1224510 | 0.806459 | 8.142869e-50 | -8.615850e-47 |
| Msa0202380 | Msa1224510 | 0.816174 | 6.333857e-52 | -8.615850e-47 |
| Msa0204170 | Msa1224510 | 0.821146 | 4.713952e-53 | -8.615850e-47 |
| Msa0224210 | Msa1224510 | 0.822024 | 2.955209e-53 | -8.615850e-47 |
| Msa0238710 | Msa1224510 | 0.843223 | 1.599003e-58 | -8.615850e-47 |
| Msa0370360 | Msa1224510 | 0.843072 | 1.754388e-58 | -8.615850e-47 |
| Msa0385320 | Msa1224510 | 0.823511 | 1.331498e-53 | -8.615850e-47 |
| Msa0390790 | Msa1224510 | 0.824740 | 6.850578e-54 | -8.615850e-47 |
| Msa0393100 | Msa1224510 | 0.847784 | 9.290557e-60 | -8.615850e-47 |
| Msa0402800 | Msa1224510 | 0.845156 | 4.839984e-59 | -8.615850e-47 |
| Msa0417860 | Msa1224510 | 0.812555 | 3.997792e-51 | -8.615850e-47 |
| Msa0421080 | Msa1224510 | 0.826098 | 3.268057e-54 | -8.615850e-47 |
| Msa0429840 | Msa1224510 | 0.803654 | 3.143931e-49 | -8.615850e-47 |
| Msa0429910 | Msa1224510 | 0.810680 | 1.021977e-50 | -8.615850e-47 |
| Msa0434400 | Msa1224510 | 0.802269 | 6.079029e-49 | -8.615850e-47 |
| Msa0438070 | Msa1224510 | 0.866405 | 2.920249e-65 | -8.615850e-47 |
| Msa0443450 | Msa1224510 | 0.816465 | 5.452667e-52 | -8.615850e-47 |
| Msa0449620 | Msa1224510 | 0.823039 | 1.716732e-53 | -8.615850e-47 |
| Msa0464360 | Msa1224510 | 0.825036 | 5.834021e-54 | -8.615850e-47 |
| Msa0466850 | Msa1224510 | 0.816451 | 5.491897e-52 | -8.615850e-47 |
| Msa0480530 | Msa1224510 | 0.822198 | 2.693270e-53 | -8.615850e-47 |
| Msa0480540 | Msa1224510 | 0.860385 | 2.142693e-63 | -8.615850e-47 |
| Msa0480550 | Msa1224510 | 0.874431 | 6.791487e-68 | -8.615850e-47 |
| Msa0481770 | Msa1224510 | 0.833368 | 5.550292e-56 | -8.615850e-47 |
| Msa1000800 | Msa1224510 | 0.814024 | 1.901320e-51 | -8.615850e-47 |
| Msa1025750 | Msa1224510 | 0.808098 | 3.660066e-50 | -8.615850e-47 |
| Msa1026080 | Msa1224510 | 0.814261 | 1.685706e-51 | -8.615850e-47 |
| Msa1026890 | Msa1224510 | 0.824815 | 6.579500e-54 | -8.615850e-47 |
| Msa1027910 | Msa1224510 | 0.844457 | 7.470664e-59 | -8.615850e-47 |
| Msa1030210 | Msa1224510 | 0.858679 | 6.981234e-63 | -8.615850e-47 |
| Msa1064240 | Msa1224510 | 0.845096 | 5.025651e-59 | -8.615850e-47 |
| Msa1069250 | Msa1224510 | 0.855946 | 4.483638e-62 | -8.615850e-47 |
| Msa1084890 | Msa1224510 | 0.819302 | 1.247052e-52 | -8.615850e-47 |
| Msa1102210 | Msa1224510 | 0.804469 | 2.128326e-49 | -8.615850e-47 |
| Msa0246140 | Msa1224510 | 0.842801 | 2.070641e-58 | -8.615850e-47 |
| Msa0254640 | Msa1224510 | 0.821271 | 4.413334e-53 | -8.615850e-47 |
| Msa0265480 | Msa1224510 | 0.806595 | 7.622629e-50 | -8.615850e-47 |
| Msa0267900 | Msa1224510 | 0.841122 | 5.753076e-58 | -8.615850e-47 |
| Msa0284730 | Msa1224510 | 0.807485 | 4.939180e-50 | -8.615850e-47 |
| Msa0306310 | Msa1224510 | 0.860648 | 1.784436e-63 | -8.615850e-47 |
| Msa0307350 | Msa1224510 | 0.804783 | 1.829970e-49 | -8.615850e-47 |
| Msa0316470 | Msa1224510 | 0.809786 | 1.592631e-50 | -8.615850e-47 |
| Msa0319680 | Msa1224510 | 0.828719 | 7.688973e-55 | -8.615850e-47 |
| Msa0324810 | Msa1224510 | 0.806676 | 7.326880e-50 | -8.615850e-47 |
| Msa0324840 | Msa1224510 | 0.829745 | 4.334166e-55 | -8.615850e-47 |
| Msa0332360 | Msa1224510 | 0.815368 | 9.581971e-52 | -8.615850e-47 |
| Msa0340370 | Msa1224510 | 0.827709 | 1.346501e-54 | -8.615850e-47 |
| Msa0345980 | Msa1224510 | 0.830588 | 2.698943e-55 | -8.615850e-47 |
| Msa1110900 | Msa1224510 | 0.810595 | 1.066038e-50 | -8.615850e-47 |
| Msa1111860 | Msa1224510 | 0.818036 | 2.417201e-52 | -8.615850e-47 |
| Msa1117770 | Msa1224510 | -0.816931 | 4.288307e-52 | -8.615850e-47 |
| Msa1120580 | Msa1224510 | 0.834842 | 2.371507e-56 | -8.615850e-47 |
| Msa1137750 | Msa1224510 | 0.807483 | 4.943694e-50 | -8.615850e-47 |
| Msa1154240 | Msa1224510 | 0.842819 | 2.048769e-58 | -8.615850e-47 |
| Msa1157110 | Msa1224510 | 0.843868 | 1.075173e-58 | -8.615850e-47 |
| Msa1157200 | Msa1224510 | 0.809932 | 1.481933e-50 | -8.615850e-47 |
| Msa1174280 | Msa1224510 | 0.819275 | 1.265394e-52 | -8.615850e-47 |
| Msa1184400 | Msa1224510 | 0.872734 | 2.533519e-67 | -8.615850e-47 |
| Msa1202110 | Msa1224510 | 0.820277 | 7.466813e-53 | -8.615850e-47 |
| Msa1208840 | Msa1224510 | 0.814302 | 1.651447e-51 | -8.615850e-47 |
| Msa1211610 | Msa1224510 | 0.865333 | 6.371221e-65 | -8.615850e-47 |
| Msa1217260 | Msa1224510 | 0.800716 | 1.265158e-48 | -8.615850e-47 |
| Msa1223560 | Msa1224510 | 0.877489 | 6.033539e-69 | -8.615850e-47 |
| Msa1224510 | Msa1245890 | 0.826150 | 3.175850e-54 | -8.615850e-47 |
| Msa1224510 | Msa1254870 | 0.820050 | 8.418926e-53 | -8.615850e-47 |
| Msa1224510 | Msa1256600 | 0.941437 | 4.162210e-101 | -8.615850e-47 |
| Msa1224510 | Msa1259030 | 0.824164 | 9.363429e-54 | -8.615850e-47 |
| Msa1224510 | Msa1262540 | 0.809912 | 1.496577e-50 | -8.615850e-47 |
| Msa1224510 | Msa1263500 | 0.866507 | 2.711279e-65 | -8.615850e-47 |
| Msa1224510 | Msa1299480 | 0.868915 | 4.578660e-66 | -8.615850e-47 |
| Msa1224510 | Msa1307930 | 0.868509 | 6.193775e-66 | -8.615850e-47 |
| Msa1224510 | Msa1322180 | 0.808643 | 2.800806e-50 | -8.615850e-47 |
| Msa1224510 | Msa1328430 | 0.820955 | 5.217811e-53 | -8.615850e-47 |
| Msa1224510 | Msa1333700 | 0.982784 | 5.422005e-156 | -8.615850e-47 |
| Msa1224510 | Msa1344330 | 0.806674 | 7.335765e-50 | -8.615850e-47 |
| Msa1224510 | Msa1349830 | 0.868964 | 4.412855e-66 | -8.615850e-47 |
| Msa1224510 | Msa1359770 | 0.801673 | 8.057545e-49 | -8.615850e-47 |
| Msa1224510 | Msa1369450 | 0.863202 | 2.945583e-64 | -8.615850e-47 |
| Msa1224510 | Msa1373060 | 0.800839 | 1.193733e-48 | -8.615850e-47 |
| Msa1224510 | Msa1377050 | 0.862930 | 3.575127e-64 | -8.615850e-47 |
| Msa1224510 | Msa1383790 | 0.807460 | 5.000227e-50 | -8.615850e-47 |
| Msa1224510 | Msa1387610 | 0.882195 | 1.277147e-70 | -8.615850e-47 |
| Msa1224510 | Msa1396160 | 0.806079 | 9.789794e-50 | -8.615850e-47 |
| Msa1224510 | Msa1398120 | 0.848228 | 7.004867e-60 | -8.615850e-47 |
| Msa1224510 | Msa1398320 | 0.820168 | 7.908274e-53 | -8.615850e-47 |
| Msa1224510 | Msa1399930 | 0.842796 | 2.077683e-58 | -8.615850e-47 |
| Msa1224510 | Msa1401110 | 0.829735 | 4.359144e-55 | -8.615850e-47 |
| Msa1224510 | Msa1405500 | 0.829551 | 4.832093e-55 | -8.615850e-47 |
| Msa1224510 | Msa1410500 | -0.801917 | 7.181851e-49 | -8.615850e-47 |
| Msa1224510 | Msa1419200 | 0.831875 | 1.302778e-55 | -8.615850e-47 |
| Msa1224510 | Msa1422230 | 0.848699 | 5.189368e-60 | -8.615850e-47 |
| Msa1224510 | Msa1427000 | 0.824059 | 9.908998e-54 | -8.615850e-47 |
| Msa1224510 | Msa1435320 | 0.853759 | 1.932469e-61 | -8.615850e-47 |
| Msa1224510 | Msa1438160 | 0.840790 | 7.033423e-58 | -8.615850e-47 |
| Msa1224510 | Msa1439780 | 0.816783 | 4.627339e-52 | -8.615850e-47 |
| Msa1224510 | Msa1443400 | 0.852867 | 3.481791e-61 | -8.615850e-47 |
| Msa1224510 | Msa1448040 | 0.852068 | 5.883599e-61 | -8.615850e-47 |
| Msa1224510 | Msa1449470 | 0.879203 | 1.508644e-69 | -8.615850e-47 |
| Msa1224510 | Msa1453600 | 0.835716 | 1.427043e-56 | -8.615850e-47 |
| Msa1224510 | Msa1459920 | 0.843082 | 1.743820e-58 | -8.615850e-47 |
| Msa1224510 | Msa1459930 | 0.843505 | 1.344769e-58 | -8.615850e-47 |
| Msa0482820 | Msa1224510 | 0.818554 | 1.844517e-52 | -8.615850e-47 |
| Msa0488580 | Msa1224510 | 0.844504 | 7.256793e-59 | -8.615850e-47 |
| Msa0493870 | Msa1224510 | 0.802240 | 6.163356e-49 | -8.615850e-47 |
| Msa0497860 | Msa1224510 | 0.853501 | 2.292451e-61 | -8.615850e-47 |
| Msa0500770 | Msa1224510 | 0.863381 | 2.593506e-64 | -8.615850e-47 |
| Msa0500910 | Msa1224510 | 0.807215 | 5.636243e-50 | -8.615850e-47 |
| Msa0506370 | Msa1224510 | 0.810394 | 1.178397e-50 | -8.615850e-47 |
| Msa0508160 | Msa1224510 | 0.811791 | 5.867111e-51 | -8.615850e-47 |
| Msa0513670 | Msa1224510 | 0.816183 | 6.305610e-52 | -8.615850e-47 |
| Msa0523080 | Msa1224510 | 0.812567 | 3.973782e-51 | -8.615850e-47 |
| Msa0534610 | Msa1224510 | 0.802619 | 5.148294e-49 | -8.615850e-47 |
| Msa0550550 | Msa1224510 | 0.833093 | 6.501783e-56 | -8.615850e-47 |
| Msa0550560 | Msa1224510 | 0.821817 | 3.300314e-53 | -8.615850e-47 |
| Msa0550980 | Msa1224510 | -0.822370 | 2.457059e-53 | -8.615850e-47 |
| Msa0554770 | Msa1224510 | -0.816241 | 6.122041e-52 | -8.615850e-47 |
| Msa0560280 | Msa1224510 | 0.810616 | 1.055231e-50 | -8.615850e-47 |
| Msa0566530 | Msa1224510 | 0.801918 | 7.175699e-49 | -8.615850e-47 |
| Msa0568110 | Msa1224510 | 0.828649 | 7.994126e-55 | -8.615850e-47 |
| Msa0570460 | Msa1224510 | 0.845285 | 4.468536e-59 | -8.615850e-47 |
| Msa0572700 | Msa1224510 | 0.801707 | 7.930620e-49 | -8.615850e-47 |
| Msa0573950 | Msa1224510 | 0.813123 | 3.002029e-51 | -8.615850e-47 |
| Msa0576560 | Msa1224510 | 0.832319 | 1.011852e-55 | -8.615850e-47 |
| Msa0580840 | Msa1224510 | 0.864523 | 1.143631e-64 | -8.615850e-47 |
| Msa0585060 | Msa1224510 | 0.841706 | 4.038737e-58 | -8.615850e-47 |
| Msa0590810 | Msa1224510 | 0.802345 | 5.863006e-49 | -8.615850e-47 |
| Msa0843740 | Msa1224510 | 0.812231 | 4.704336e-51 | -8.615850e-47 |
| Msa0848020 | Msa1224510 | 0.857518 | 1.545926e-62 | -8.615850e-47 |
| Msa0859040 | Msa1224510 | 0.853742 | 1.954172e-61 | -8.615850e-47 |
| Msa0863940 | Msa1224510 | 0.827475 | 1.533146e-54 | -8.615850e-47 |
| Msa0865810 | Msa1224510 | 0.863174 | 3.004885e-64 | -8.615850e-47 |
| Msa0865820 | Msa1224510 | 0.851129 | 1.085115e-60 | -8.615850e-47 |
| Msa0865830 | Msa1224510 | 0.851867 | 6.708515e-61 | -8.615850e-47 |
| Msa0874640 | Msa1224510 | 0.816870 | 4.425607e-52 | -8.615850e-47 |
| Msa0879940 | Msa1224510 | -0.808630 | 2.817890e-50 | -8.615850e-47 |
| Msa0965780 | Msa1224510 | 0.815463 | 9.127642e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224510 | MtrunA17_Chr4g0076441 | 96.667 | 330 | 11 | 0 | 1 | 330 | 1 | 330 | 0.0 | 670 |
| Msa1224510 | MtrunA17_Chr2g0290661 | 81.553 | 309 | 57 | 0 | 2 | 310 | 7 | 315 | 0.0 | 514 |
| Msa1224510 | MtrunA17_Chr3g0102691 | 66.978 | 321 | 102 | 3 | 1 | 318 | 1 | 320 | 2.35e-164 | 462 |
| Msa1224510 | MtrunA17_Chr4g0075941 | 95.783 | 166 | 7 | 0 | 1 | 166 | 1 | 166 | 1.54e-115 | 331 |
| Msa1224510 | MtrunA17_Chr7g0236461 | 29.603 | 277 | 165 | 9 | 26 | 290 | 95 | 353 | 1.85e-21 | 95.1 |
| Msa1224510 | MtrunA17_Chr4g0035361 | 29.437 | 231 | 151 | 4 | 34 | 254 | 2 | 230 | 1.97e-21 | 94.7 |
| Msa1224510 | MtrunA17_Chr3g0144891 | 29.870 | 231 | 150 | 4 | 34 | 254 | 98 | 326 | 7.25e-21 | 93.2 |
| Msa1224510 | MtrunA17_Chr3g0144911 | 29.600 | 250 | 157 | 7 | 8 | 251 | 93 | 329 | 9.49e-20 | 89.4 |
| Msa1224510 | MtrunA17_Chr8g0369291 | 31.020 | 245 | 144 | 7 | 26 | 254 | 85 | 320 | 1.35e-19 | 89.7 |
| Msa1224510 | MtrunA17_Chr5g0399151 | 29.493 | 217 | 143 | 4 | 26 | 236 | 110 | 322 | 3.99e-19 | 87.8 |
| Msa1224510 | MtrunA17_Chr3g0141821 | 28.364 | 275 | 159 | 10 | 1 | 260 | 59 | 310 | 6.92e-19 | 87.4 |
| Msa1224510 | MtrunA17_Chr4g0035391 | 28.708 | 209 | 141 | 3 | 34 | 236 | 108 | 314 | 1.47e-18 | 86.7 |
| Msa1224510 | MtrunA17_Chr8g0372651 | 29.741 | 232 | 142 | 7 | 34 | 250 | 80 | 305 | 5.29e-18 | 84.7 |
| Msa1224510 | MtrunA17_Chr1g0155521 | 30.047 | 213 | 133 | 4 | 34 | 236 | 113 | 319 | 5.47e-18 | 84.7 |
| Msa1224510 | MtrunA17_Chr5g0404711 | 28.326 | 233 | 145 | 6 | 34 | 251 | 77 | 302 | 6.58e-18 | 84.3 |
| Msa1224510 | MtrunA17_Chr3g0080051 | 28.326 | 233 | 153 | 6 | 26 | 251 | 97 | 322 | 1.33e-15 | 77.8 |
| Msa1224510 | MtrunA17_Chr1g0161441 | 26.923 | 208 | 124 | 8 | 27 | 225 | 25 | 213 | 5.96e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224510 | AT1G55840.1 | 64.596 | 322 | 110 | 2 | 2 | 322 | 7 | 325 | 5.09e-165 | 462 |
| Msa1224510 | AT5G47730.4 | 70.550 | 309 | 89 | 1 | 2 | 310 | 7 | 313 | 5.50e-165 | 463 |
| Msa1224510 | AT5G47730.1 | 70.550 | 309 | 89 | 1 | 2 | 310 | 7 | 313 | 5.50e-165 | 463 |
| Msa1224510 | AT1G55840.2 | 67.333 | 300 | 94 | 2 | 24 | 322 | 2 | 298 | 1.39e-159 | 448 |
| Msa1224510 | AT5G47730.2 | 74.231 | 260 | 65 | 1 | 51 | 310 | 1 | 258 | 1.58e-142 | 404 |
| Msa1224510 | AT5G47730.3 | 74.231 | 260 | 65 | 1 | 51 | 310 | 1 | 258 | 1.58e-142 | 404 |
| Msa1224510 | AT4G39180.3 | 29.195 | 298 | 176 | 9 | 34 | 310 | 97 | 380 | 4.88e-23 | 100 |
| Msa1224510 | AT4G39180.2 | 29.195 | 298 | 176 | 9 | 34 | 310 | 97 | 380 | 4.88e-23 | 100 |
| Msa1224510 | AT4G39180.1 | 32.340 | 235 | 139 | 5 | 34 | 254 | 97 | 325 | 1.02e-22 | 99.0 |
| Msa1224510 | AT3G24840.7 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 9.93e-22 | 96.3 |
| Msa1224510 | AT3G24840.3 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 9.93e-22 | 96.3 |
| Msa1224510 | AT3G24840.5 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 9.93e-22 | 96.3 |
| Msa1224510 | AT3G24840.1 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa1224510 | AT3G24840.6 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa1224510 | AT3G24840.4 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa1224510 | AT3G24840.2 | 30.380 | 237 | 148 | 6 | 26 | 250 | 98 | 329 | 1.10e-21 | 96.3 |
| Msa1224510 | AT4G34580.2 | 28.685 | 251 | 161 | 5 | 14 | 254 | 75 | 317 | 3.35e-21 | 94.7 |
| Msa1224510 | AT4G34580.1 | 28.685 | 251 | 161 | 5 | 14 | 254 | 75 | 317 | 3.35e-21 | 94.7 |
| Msa1224510 | AT2G21540.3 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 6.65e-21 | 94.0 |
| Msa1224510 | AT2G21540.5 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 6.65e-21 | 94.0 |
| Msa1224510 | AT5G47510.2 | 30.043 | 233 | 141 | 6 | 34 | 260 | 52 | 268 | 6.83e-21 | 92.4 |
| Msa1224510 | AT2G21540.6 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa1224510 | AT2G21540.2 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa1224510 | AT2G21540.1 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa1224510 | AT2G21540.4 | 30.213 | 235 | 144 | 5 | 34 | 254 | 96 | 324 | 7.54e-21 | 93.6 |
| Msa1224510 | AT5G47510.4 | 30.043 | 233 | 141 | 6 | 34 | 260 | 52 | 268 | 8.32e-21 | 92.4 |
| Msa1224510 | AT5G47510.1 | 30.043 | 233 | 141 | 6 | 34 | 260 | 51 | 267 | 8.32e-21 | 92.4 |
| Msa1224510 | AT4G36490.1 | 30.172 | 232 | 142 | 6 | 34 | 251 | 79 | 304 | 5.13e-20 | 91.3 |
| Msa1224510 | AT2G18180.2 | 30.213 | 235 | 144 | 5 | 34 | 254 | 82 | 310 | 5.55e-20 | 90.9 |
| Msa1224510 | AT2G18180.3 | 30.472 | 233 | 142 | 5 | 36 | 254 | 13 | 239 | 6.25e-20 | 90.9 |
| Msa1224510 | AT2G18180.4 | 30.472 | 233 | 142 | 5 | 36 | 254 | 13 | 239 | 6.31e-20 | 90.5 |
| Msa1224510 | AT2G18180.1 | 30.213 | 235 | 144 | 5 | 34 | 254 | 82 | 310 | 6.41e-20 | 90.9 |
| Msa1224510 | AT2G16380.2 | 29.362 | 235 | 146 | 5 | 34 | 254 | 89 | 317 | 7.03e-20 | 90.9 |
| Msa1224510 | AT2G16380.1 | 29.362 | 235 | 146 | 5 | 34 | 254 | 89 | 317 | 7.03e-20 | 90.9 |
| Msa1224510 | AT2G21520.2 | 29.464 | 224 | 147 | 4 | 34 | 251 | 115 | 333 | 1.24e-19 | 90.1 |
| Msa1224510 | AT2G21520.3 | 29.464 | 224 | 147 | 4 | 34 | 251 | 115 | 333 | 1.24e-19 | 90.1 |
| Msa1224510 | AT2G21520.1 | 29.464 | 224 | 147 | 4 | 34 | 251 | 111 | 329 | 1.26e-19 | 90.1 |
| Msa1224510 | AT1G19650.3 | 28.309 | 272 | 157 | 8 | 14 | 250 | 62 | 330 | 2.47e-19 | 88.6 |
| Msa1224510 | AT1G19650.1 | 28.309 | 272 | 157 | 8 | 14 | 250 | 62 | 330 | 3.74e-19 | 88.6 |
| Msa1224510 | AT1G19650.2 | 30.131 | 229 | 148 | 5 | 33 | 251 | 32 | 258 | 7.56e-19 | 87.8 |
| Msa1224510 | AT4G39170.2 | 28.947 | 228 | 143 | 5 | 34 | 251 | 109 | 327 | 1.31e-18 | 87.0 |
| Msa1224510 | AT4G39170.1 | 28.947 | 228 | 143 | 5 | 34 | 251 | 109 | 327 | 1.42e-18 | 87.0 |
| Msa1224510 | AT5G47510.3 | 28.761 | 226 | 139 | 6 | 41 | 260 | 2 | 211 | 1.16e-17 | 82.8 |
| Msa1224510 | AT1G75370.2 | 27.273 | 231 | 156 | 4 | 34 | 254 | 114 | 342 | 1.24e-16 | 81.3 |
| Msa1224510 | AT1G75370.1 | 27.273 | 231 | 156 | 4 | 34 | 254 | 114 | 342 | 1.35e-16 | 80.9 |
| Msa1224510 | AT5G56160.2 | 27.338 | 278 | 185 | 8 | 8 | 272 | 69 | 342 | 7.44e-16 | 78.6 |
| Msa1224510 | AT5G56160.1 | 27.338 | 278 | 185 | 8 | 8 | 272 | 69 | 342 | 8.22e-16 | 78.6 |
| Msa1224510 | AT5G56160.3 | 27.338 | 278 | 185 | 8 | 8 | 272 | 69 | 342 | 8.22e-16 | 78.6 |
| Msa1224510 | AT1G55690.2 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa1224510 | AT1G55690.4 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa1224510 | AT1G55690.1 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa1224510 | AT1G55690.5 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.97e-15 | 77.4 |
| Msa1224510 | AT1G55690.3 | 28.571 | 238 | 153 | 6 | 26 | 250 | 96 | 329 | 1.98e-15 | 77.4 |
| Msa1224510 | AT2G18180.5 | 28.440 | 218 | 136 | 5 | 51 | 254 | 1 | 212 | 1.39e-14 | 74.7 |
| Msa1224510 | AT2G16380.3 | 27.523 | 218 | 138 | 5 | 51 | 254 | 1 | 212 | 5.78e-14 | 72.8 |
| Msa1224510 | AT1G01630.1 | 27.322 | 183 | 113 | 7 | 34 | 213 | 53 | 218 | 1.05e-11 | 64.7 |
Find 112 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAAATCAGCAGGAATAAT+TGG | 0.243946 | 8_1:+89491622 | None:intergenic |
| GAGTTAGGCCTTTAGTAGTA+TGG | 0.265480 | 8_1:-89488664 | Msa1224510:three_prime_UTR |
| CTCAACTCAAAGCAATAAAA+TGG | 0.272672 | 8_1:-89492168 | Msa1224510:exon |
| CCTAACCTTGAATGGAAATA+AGG | 0.294757 | 8_1:-89488933 | Msa1224510:CDS |
| ACCCCAAACTTGTAGAAAAC+TGG | 0.309056 | 8_1:-89488778 | Msa1224510:three_prime_UTR |
| GTATCCACATCCGGAGGTTC+TGG | 0.320907 | 8_1:+89488992 | None:intergenic |
| AAGGGATTGGGATCCTTCTA+AGG | 0.324848 | 8_1:-89491930 | Msa1224510:CDS |
| GGATGTGTAAAGTTTGTATT+AGG | 0.326034 | 8_1:-89488448 | Msa1224510:three_prime_UTR |
| GGTCTTCCTGTCTTTGCAAT+TGG | 0.327042 | 8_1:-89491446 | Msa1224510:CDS |
| TAGTTTAACAACTCAATAAA+AGG | 0.331126 | 8_1:-89488844 | Msa1224510:three_prime_UTR |
| ATTCGTTAATTTGTAGAGTT+AGG | 0.342021 | 8_1:-89488679 | Msa1224510:three_prime_UTR |
| TAATTCCTGCAACTGATTCA+TGG | 0.344567 | 8_1:+89492142 | None:intergenic |
| AGAAAAGTGCAGGTCTTATC+AGG | 0.347127 | 8_1:-89490485 | Msa1224510:CDS |
| GATTCAAGGCCGAGAGCTTC+AGG | 0.351238 | 8_1:+89491082 | None:intergenic |
| AGTTGATTGATTGTTTAAAC+TGG | 0.352364 | 8_1:-89491767 | Msa1224510:CDS |
| CTCGGCCTTGAATCACATTA+AGG | 0.354278 | 8_1:-89491073 | Msa1224510:intron |
| GGCTTGAGCCGTCTTGGATT+AGG | 0.362583 | 8_1:+89488880 | None:intergenic |
| TGCAACAGCTTCACGGAGTC+TGG | 0.368534 | 8_1:+89489048 | None:intergenic |
| TTGTTCCTTATTTCCATTCA+AGG | 0.371242 | 8_1:+89488928 | None:intergenic |
| CCTGTCTTTGCAATTGGTGT+TGG | 0.372437 | 8_1:-89491440 | Msa1224510:CDS |
| ACCATTTGATAAGCCTTAGA+AGG | 0.373448 | 8_1:+89491917 | None:intergenic |
| CAACAAGCTGAAAATATGTA+TGG | 0.379181 | 8_1:+89490684 | None:intergenic |
| ATAAGGAACAATTGAACAAT+TGG | 0.379476 | 8_1:-89488916 | Msa1224510:CDS |
| GAAAATTATATTGAGATGAA+TGG | 0.383349 | 8_1:-89488364 | Msa1224510:three_prime_UTR |
| CCTTATTTCCATTCAAGGTT+AGG | 0.386830 | 8_1:+89488933 | None:intergenic |
| TAACAATACTGATAGATATC+TGG | 0.387001 | 8_1:-89488559 | Msa1224510:three_prime_UTR |
| ACCTTTACACAAGTGGTAAT+AGG | 0.387066 | 8_1:+89491120 | None:intergenic |
| TTTGATAGCCTAACCTTGAA+TGG | 0.388252 | 8_1:-89488941 | Msa1224510:CDS |
| GCTCTCAATGATTTCATGAT+AGG | 0.398756 | 8_1:-89488751 | Msa1224510:three_prime_UTR |
| TTGCCCTAGGCAGTAAGGTT+TGG | 0.398802 | 8_1:-89488425 | Msa1224510:three_prime_UTR |
| TCACAACTCATTGGATTGTC+CGG | 0.400882 | 8_1:-89491583 | Msa1224510:CDS |
| GCTTCCACCTTCTGAATGTC+TGG | 0.409269 | 8_1:+89489135 | None:intergenic |
| TGATTGAAGTAATCTATCTA+TGG | 0.422925 | 8_1:+89492259 | None:intergenic |
| TGTGAGACTGCACATAATAA+TGG | 0.425984 | 8_1:+89491295 | None:intergenic |
| TTCCCTCTCCATACTACTAA+AGG | 0.427687 | 8_1:+89488656 | None:intergenic |
| GCTTTCTAAAAGCAAGGGAT+TGG | 0.428984 | 8_1:-89491943 | Msa1224510:CDS |
| CTTTCTAAAAGCAAGGGATT+GGG | 0.432846 | 8_1:-89491942 | Msa1224510:CDS |
| GGATTCCATGAATCAGTTGC+AGG | 0.433771 | 8_1:-89492147 | Msa1224510:CDS |
| GATGGTGGCTTGAGCCGTCT+TGG | 0.438882 | 8_1:+89488874 | None:intergenic |
| ATACGTGATTCACAACTCAT+TGG | 0.449153 | 8_1:-89491592 | Msa1224510:CDS |
| GCCTATTACCACTTGTGTAA+AGG | 0.454247 | 8_1:-89491121 | Msa1224510:CDS |
| TTCTGTAGAAAAGAAGGCTC+TGG | 0.457102 | 8_1:-89489163 | Msa1224510:CDS |
| ATGAAATGATCCCTGCTTGA+TGG | 0.479907 | 8_1:+89489024 | None:intergenic |
| CCACATTTCTGTAGAAAAGA+AGG | 0.481927 | 8_1:-89489169 | Msa1224510:CDS |
| CCCCAAACTTGTAGAAAACT+GGG | 0.483726 | 8_1:-89488777 | Msa1224510:three_prime_UTR |
| AGGTACCTTAATGTGATTCA+AGG | 0.487226 | 8_1:+89491068 | None:intergenic |
| TCCTTCTAAGGCTTATCAAA+TGG | 0.487749 | 8_1:-89491918 | Msa1224510:intron |
| CCTGAAAAGTTGTCTGCAAT+GGG | 0.500033 | 8_1:+89492102 | None:intergenic |
| ATATCGCGATCGTGTAATCT+TGG | 0.500716 | 8_1:-89491259 | Msa1224510:intron |
| ACCTGAAAAGTTGTCTGCAA+TGG | 0.500831 | 8_1:+89492101 | None:intergenic |
| GAGCATACCCTTCCCAAGAA+AGG | 0.500885 | 8_1:+89488620 | None:intergenic |
| GTCTAAAACCTTTACACAAG+TGG | 0.503259 | 8_1:+89491113 | None:intergenic |
| AGCTGTTGCACCCATCAAGC+AGG | 0.504047 | 8_1:-89489035 | Msa1224510:CDS |
| TAGCAAGCGCGTTATACGTT+AGG | 0.504105 | 8_1:-89488469 | Msa1224510:three_prime_UTR |
| AAAACCAAACCTTACTGCCT+AGG | 0.504328 | 8_1:+89488421 | None:intergenic |
| TGTGGAATTTCCAGAACCTC+CGG | 0.505738 | 8_1:-89489002 | Msa1224510:CDS |
| CTTGTCCTCTCGTGTAAAAG+TGG | 0.505908 | 8_1:+89490509 | None:intergenic |
| AAGCGAGAACTGCTATTCCT+TGG | 0.507986 | 8_1:-89489116 | Msa1224510:CDS |
| AAATAAGTATGAGTCTTCTC+AGG | 0.511983 | 8_1:+89490720 | None:intergenic |
| GCAACCCTTGTATCCACATC+CGG | 0.513462 | 8_1:+89488983 | None:intergenic |
| ATTTCCAGAACCTCCGGATG+TGG | 0.516108 | 8_1:-89488996 | Msa1224510:CDS |
| TGATGGGTGCAACAGCTTCA+CGG | 0.519474 | 8_1:+89489041 | None:intergenic |
| GATAGGTCCTTTCTTGGGAA+GGG | 0.519490 | 8_1:-89488627 | Msa1224510:three_prime_UTR |
| AGGATAGTTGAGATCATCAA+TGG | 0.519931 | 8_1:+89490740 | None:intergenic |
| CACAACTCATTGGATTGTCC+GGG | 0.520676 | 8_1:-89491582 | Msa1224510:CDS |
| AACCTCCGGATGTGGATACA+AGG | 0.521017 | 8_1:-89488988 | Msa1224510:CDS |
| TTAGGTTGCCCTAGGCAGTA+AGG | 0.521543 | 8_1:-89488430 | Msa1224510:three_prime_UTR |
| AGATAGGTCCTTTCTTGGGA+AGG | 0.523771 | 8_1:-89488628 | Msa1224510:three_prime_UTR |
| AACAAGCTGAAAATATGTAT+GGG | 0.528848 | 8_1:+89490685 | None:intergenic |
| ATTGTTCTATATAAATCAGC+AGG | 0.538192 | 8_1:+89491613 | None:intergenic |
| TTAAACTAGTCTTCAGATGG+TGG | 0.542463 | 8_1:+89488859 | None:intergenic |
| TGAAATTAACACAGTCCTTG+TGG | 0.544715 | 8_1:+89488496 | None:intergenic |
| TAAAACAAGGAAGAAACAAA+GGG | 0.549490 | 8_1:-89488807 | Msa1224510:three_prime_UTR |
| GACTCGCTTTCTAAAAGCAA+GGG | 0.549883 | 8_1:-89491948 | Msa1224510:CDS |
| AGTTTGTATTAGGTTGCCCT+AGG | 0.555979 | 8_1:-89488438 | Msa1224510:three_prime_UTR |
| CCAACACCAATTGCAAAGAC+AGG | 0.557244 | 8_1:+89491440 | None:intergenic |
| CTAAAACAAGGAAGAAACAA+AGG | 0.557659 | 8_1:-89488808 | Msa1224510:three_prime_UTR |
| ATTGAGATGAATGGTTAAGC+CGG | 0.560469 | 8_1:-89488355 | Msa1224510:three_prime_UTR |
| GGCCTTTAGTAGTATGGAGA+GGG | 0.562694 | 8_1:-89488658 | Msa1224510:three_prime_UTR |
| GAGGACAAGAAGAAAAGTGC+AGG | 0.566912 | 8_1:-89490495 | Msa1224510:CDS |
| CCATGCTTCTTCGATGCAGA+AGG | 0.568603 | 8_1:+89491147 | None:intergenic |
| AATGATCAGAATGTTCATCA+AGG | 0.572623 | 8_1:-89491989 | Msa1224510:intron |
| TTGTTAAACTAGTCTTCAGA+TGG | 0.572957 | 8_1:+89488856 | None:intergenic |
| AAACCAAACCTTACTGCCTA+GGG | 0.576178 | 8_1:+89488422 | None:intergenic |
| TTGTAAAGCTGTTGGTGAAG+GGG | 0.576838 | 8_1:+89489088 | None:intergenic |
| GAACAATTGGACTAGAGCAC+AGG | 0.579823 | 8_1:-89488903 | Msa1224510:CDS |
| CATGACTGGCCTGAAGCTCT+CGG | 0.583248 | 8_1:-89491091 | Msa1224510:CDS |
| TTGGTGAAGGGGATGATCCA+AGG | 0.586370 | 8_1:+89489099 | None:intergenic |
| GTGCAGGTCTTATCAGGATG+CGG | 0.586473 | 8_1:-89490479 | Msa1224510:CDS |
| TGAAATGATCCCTGCTTGAT+GGG | 0.594800 | 8_1:+89489025 | None:intergenic |
| AGTTGTAAAGCTGTTGGTGA+AGG | 0.599771 | 8_1:+89489086 | None:intergenic |
| GAGCACCTCTCTTGTATACC+CGG | 0.601263 | 8_1:+89491564 | None:intergenic |
| CCTTCTGCATCGAAGAAGCA+TGG | 0.604202 | 8_1:-89491147 | Msa1224510:CDS |
| TGACTCGCTTTCTAAAAGCA+AGG | 0.605557 | 8_1:-89491949 | Msa1224510:CDS |
| TGATGTAGTTGTAAAGCTGT+TGG | 0.607103 | 8_1:+89489080 | None:intergenic |
| AGGCCTTTAGTAGTATGGAG+AGG | 0.610397 | 8_1:-89488659 | Msa1224510:three_prime_UTR |
| GTTGTAAAGCTGTTGGTGAA+GGG | 0.611186 | 8_1:+89489087 | None:intergenic |
| GCTGTTGCACCCATCAAGCA+GGG | 0.617758 | 8_1:-89489034 | Msa1224510:CDS |
| TCATCCAGACATTCAGAAGG+TGG | 0.620255 | 8_1:-89489139 | Msa1224510:CDS |
| CTTATCAGGATGCGGACGAG+AGG | 0.624579 | 8_1:-89490471 | Msa1224510:CDS |
| CTGCATCGAAGAAGCATGGA+CGG | 0.630026 | 8_1:-89491143 | Msa1224510:CDS |
| CAAGCAGGGATCATTTCATG+TGG | 0.642715 | 8_1:-89489020 | Msa1224510:CDS |
| AGCACAGGCCTAATCCAAGA+CGG | 0.643414 | 8_1:-89488888 | Msa1224510:exon |
| ACAAGCTGAAAATATGTATG+GGG | 0.656374 | 8_1:+89490686 | None:intergenic |
| GGATCATCCAGACATTCAGA+AGG | 0.659467 | 8_1:-89489142 | Msa1224510:CDS |
| ACCTCCGGATGTGGATACAA+GGG | 0.663935 | 8_1:-89488987 | Msa1224510:CDS |
| ATTGTCCGGGTATACAAGAG+AGG | 0.683235 | 8_1:-89491569 | Msa1224510:intron |
| AAACTTGTAGAAAACTGGGG+TGG | 0.683488 | 8_1:-89488773 | Msa1224510:three_prime_UTR |
| ACCCTTGTATCCACATCCGG+AGG | 0.690874 | 8_1:+89488986 | None:intergenic |
| AATGAAACGCTACTAAAACA+AGG | 0.692072 | 8_1:-89488820 | Msa1224510:three_prime_UTR |
| GAAAAGTTGTCTGCAATGGG+TGG | 0.699381 | 8_1:+89492105 | None:intergenic |
| CCCAAACTTGTAGAAAACTG+GGG | 0.717317 | 8_1:-89488776 | Msa1224510:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTAATAATAGCAT+TGG | - | chr8_1:89490126-89490145 | Msa1224510:intron | 10.0% |
| !! | AATGTTAAGATATATATTTA+CGG | + | chr8_1:89491008-89491027 | None:intergenic | 10.0% |
| !! | GAAGTATAATTAATATTAAT+AGG | + | chr8_1:89491087-89491106 | None:intergenic | 10.0% |
| !! | TGAATTTAACAAATTAAATT+TGG | - | chr8_1:89491494-89491513 | Msa1224510:intron | 10.0% |
| !! | AAACTTATAAAAAAATAGAG+GGG | + | chr8_1:89489048-89489067 | None:intergenic | 15.0% |
| !! | GAAACTTATAAAAAAATAGA+GGG | + | chr8_1:89489049-89489068 | None:intergenic | 15.0% |
| !! | AGAAACTTATAAAAAAATAG+AGG | + | chr8_1:89489050-89489069 | None:intergenic | 15.0% |
| !!! | AACATCTCTTTTTATTTTTT+TGG | + | chr8_1:89490077-89490096 | None:intergenic | 15.0% |
| !! | AAAAATGAGATCATTATAAA+CGG | + | chr8_1:89490386-89490405 | None:intergenic | 15.0% |
| !!! | TTTATAATGATCTCATTTTT+TGG | - | chr8_1:89490386-89490405 | Msa1224510:intron | 15.0% |
| !! | TACAGTAAATTAAATGTTAA+GGG | + | chr8_1:89490579-89490598 | None:intergenic | 15.0% |
| !!! | AGTTTTTTTTTTTTTTTGAC+AGG | + | chr8_1:89490892-89490911 | None:intergenic | 15.0% |
| !!! | GACATTTTTCATAAAATTTT+TGG | - | chr8_1:89490919-89490938 | Msa1224510:intron | 15.0% |
| !! | AAACATACAAATATGACATA+AGG | + | chr8_1:89489393-89489412 | None:intergenic | 20.0% |
| !! | GAACAAAAAACTCAAATAAT+AGG | + | chr8_1:89489516-89489535 | None:intergenic | 20.0% |
| !! | TTCATGAAGCAATAAATTAA+GGG | + | chr8_1:89489871-89489890 | None:intergenic | 20.0% |
| !! | ATTCATGAAGCAATAAATTA+AGG | + | chr8_1:89489872-89489891 | None:intergenic | 20.0% |
| !! | AAAGAAATACAAGAACTTTA+TGG | + | chr8_1:89490542-89490561 | None:intergenic | 20.0% |
| !! | GTACAGTAAATTAAATGTTA+AGG | + | chr8_1:89490580-89490599 | None:intergenic | 20.0% |
| !!! | ACATTTAATTTACTGTACAT+TGG | - | chr8_1:89490582-89490601 | Msa1224510:intron | 20.0% |
| !!! | TTTTTCATAAAATTTTTGGC+TGG | - | chr8_1:89490923-89490942 | Msa1224510:intron | 20.0% |
| !! | TTTCATAAACAGATTTGAAT+GGG | + | chr8_1:89491310-89491329 | None:intergenic | 20.0% |
| !!! | TTTTCATAAACAGATTTGAA+TGG | + | chr8_1:89491311-89491330 | None:intergenic | 20.0% |
| !! | AATAAATACACTTATAGGAA+TGG | + | chr8_1:89491352-89491371 | None:intergenic | 20.0% |
| !! | ATTCCTATAAGTGTATTTAT+TGG | - | chr8_1:89491351-89491370 | Msa1224510:intron | 20.0% |
| !! | TAGTTTAACAACTCAATAAA+AGG | - | chr8_1:89491870-89491889 | Msa1224510:intron | 20.0% |
| !! | GAAAATTATATTGAGATGAA+TGG | - | chr8_1:89492350-89492369 | Msa1224510:intron | 20.0% |
| ! | TGATTGAAGTAATCTATCTA+TGG | + | chr8_1:89488458-89488477 | None:intergenic | 25.0% |
| ! | AGTTGATTGATTGTTTAAAC+TGG | - | chr8_1:89488947-89488966 | Msa1224510:CDS | 25.0% |
| ! | TATAAATCAGCAGGAATAAT+TGG | + | chr8_1:89489095-89489114 | None:intergenic | 25.0% |
| ! | ATTGTTCTATATAAATCAGC+AGG | + | chr8_1:89489104-89489123 | None:intergenic | 25.0% |
| ! | ATACAAATATGACATAAGGA+AGG | + | chr8_1:89489389-89489408 | None:intergenic | 25.0% |
| !! | TGTCATATTTGTATGTTTTC+AGG | - | chr8_1:89489395-89489414 | Msa1224510:intron | 25.0% |
| ! | TAAACAACTATTCAAGAATC+TGG | + | chr8_1:89489704-89489723 | None:intergenic | 25.0% |
| ! | AACAAGCTGAAAATATGTAT+GGG | + | chr8_1:89490032-89490051 | None:intergenic | 25.0% |
| ! | TGTTAACACTATACATTAAC+AGG | - | chr8_1:89490174-89490193 | Msa1224510:intron | 25.0% |
| !! | ATGCAATTATTACGATCTTT+TGG | + | chr8_1:89490423-89490442 | None:intergenic | 25.0% |
| !! | TAGTTTTCAACATATACGTT+TGG | - | chr8_1:89490758-89490777 | Msa1224510:CDS | 25.0% |
| !! | TTGCAATAAGATTAGTTGAA+TGG | + | chr8_1:89490851-89490870 | None:intergenic | 25.0% |
| ! | GTTAAGATATATATTTACGG+AGG | + | chr8_1:89491005-89491024 | None:intergenic | 25.0% |
| !! | TACTTGATCTTTTTAATCAG+TGG | + | chr8_1:89491260-89491279 | None:intergenic | 25.0% |
| ! | TTCATAAACAGATTTGAATG+GGG | + | chr8_1:89491309-89491328 | None:intergenic | 25.0% |
| ! | TCAAATCTGTTTATGAAAAG+CGG | - | chr8_1:89491312-89491331 | Msa1224510:intron | 25.0% |
| ! | GAACCAATAAATACACTTAT+AGG | + | chr8_1:89491357-89491376 | None:intergenic | 25.0% |
| !!! | AAATTTTGACTCTATAGTCT+TGG | + | chr8_1:89491756-89491775 | None:intergenic | 25.0% |
| ! | ATAAGGAACAATTGAACAAT+TGG | - | chr8_1:89491798-89491817 | Msa1224510:intron | 25.0% |
| ! | TAAAACAAGGAAGAAACAAA+GGG | - | chr8_1:89491907-89491926 | Msa1224510:intron | 25.0% |
| !!! | ATTCGTTAATTTGTAGAGTT+AGG | - | chr8_1:89492035-89492054 | Msa1224510:intron | 25.0% |
| ! | TAACAATACTGATAGATATC+TGG | - | chr8_1:89492155-89492174 | Msa1224510:exon | 25.0% |
| !! | TTTACTACTTCGATAGTTTT+TGG | + | chr8_1:89492189-89492208 | None:intergenic | 25.0% |
| CTCAACTCAAAGCAATAAAA+TGG | - | chr8_1:89488546-89488565 | Msa1224510:three_prime_UTR | 30.0% | |
| AATGATCAGAATGTTCATCA+AGG | - | chr8_1:89488725-89488744 | Msa1224510:three_prime_UTR | 30.0% | |
| ATAAATGTAAAGGATGAAGG+AGG | + | chr8_1:89489025-89489044 | None:intergenic | 30.0% | |
| AATAGAGGGGATAAATGTAA+AGG | + | chr8_1:89489035-89489054 | None:intergenic | 30.0% | |
| TGACTTAGTTAGTAGTCAAT+TGG | - | chr8_1:89489214-89489233 | Msa1224510:intron | 30.0% | |
| TGAAAAGGAAAGCAAAATGA+AGG | + | chr8_1:89489247-89489266 | None:intergenic | 30.0% | |
| ! | TTCATTTTGCTTTCCTTTTC+AGG | - | chr8_1:89489246-89489265 | Msa1224510:intron | 30.0% |
| ! | TCATTTTGCTTTCCTTTTCA+GGG | - | chr8_1:89489247-89489266 | Msa1224510:intron | 30.0% |
| CAACACCTTGATTAAACTTA+CGG | + | chr8_1:89489323-89489342 | None:intergenic | 30.0% | |
| AGAAGATAGAGTAATAGATG+GGG | + | chr8_1:89489364-89489383 | None:intergenic | 30.0% | |
| CAGAAGATAGAGTAATAGAT+GGG | + | chr8_1:89489365-89489384 | None:intergenic | 30.0% | |
| ACAGAAGATAGAGTAATAGA+TGG | + | chr8_1:89489366-89489385 | None:intergenic | 30.0% | |
| ATGTTGAAAAGATCATTAGC+AGG | - | chr8_1:89489751-89489770 | Msa1224510:intron | 30.0% | |
| AAATAAGTATGAGTCTTCTC+AGG | + | chr8_1:89489997-89490016 | None:intergenic | 30.0% | |
| ACAAGCTGAAAATATGTATG+GGG | + | chr8_1:89490031-89490050 | None:intergenic | 30.0% | |
| CAACAAGCTGAAAATATGTA+TGG | + | chr8_1:89490033-89490052 | None:intergenic | 30.0% | |
| ! | CATACATATTTTCAGCTTGT+TGG | - | chr8_1:89490031-89490050 | Msa1224510:intron | 30.0% |
| AAAAGAGATGTTGTTCCTTA+TGG | - | chr8_1:89490085-89490104 | Msa1224510:intron | 30.0% | |
| !! | AATCTTGCTCTAAGAAACAA+AGG | + | chr8_1:89490305-89490324 | None:intergenic | 30.0% |
| AGTCAATAATTGAGATGTGA+AGG | - | chr8_1:89490339-89490358 | Msa1224510:intron | 30.0% | |
| AGATCGTAATAATTGCATAC+TGG | - | chr8_1:89490425-89490444 | Msa1224510:intron | 30.0% | |
| ATAATTGCATACTGGATAAG+AGG | - | chr8_1:89490433-89490452 | Msa1224510:intron | 30.0% | |
| ! | TTTCCAACAACTAGTTTCAA+AGG | + | chr8_1:89490641-89490660 | None:intergenic | 30.0% |
| TGAAACTAGTTGTTGGAAAA+TGG | - | chr8_1:89490642-89490661 | Msa1224510:intron | 30.0% | |
| AGTAACTAATAGACTTGTCT+TGG | + | chr8_1:89490677-89490696 | None:intergenic | 30.0% | |
| ! | TATTTCTACACTTTCAACTG+CGG | + | chr8_1:89490711-89490730 | None:intergenic | 30.0% |
| GTTGAAAACTATTCCAATTC+TGG | + | chr8_1:89490749-89490768 | None:intergenic | 30.0% | |
| ACATAGAAAACTTGTGTTAC+AGG | + | chr8_1:89490809-89490828 | None:intergenic | 30.0% | |
| GTAAAGATAAAAGACCTTTG+TGG | - | chr8_1:89491187-89491206 | Msa1224510:intron | 30.0% | |
| GCACTTTACAAAGTAAAGTA+CGG | - | chr8_1:89491226-89491245 | Msa1224510:intron | 30.0% | |
| TTTGAATGGGGCAATTTAAA+AGG | + | chr8_1:89491297-89491316 | None:intergenic | 30.0% | |
| !! | TAAATTTGGTGTGTAGATCA+TGG | - | chr8_1:89491508-89491527 | Msa1224510:intron | 30.0% |
| ! | TTGTTCCTTATTTCCATTCA+AGG | + | chr8_1:89491789-89491808 | None:intergenic | 30.0% |
| !! | TTGTTAAACTAGTCTTCAGA+TGG | + | chr8_1:89491861-89491880 | None:intergenic | 30.0% |
| AATGAAACGCTACTAAAACA+AGG | - | chr8_1:89491894-89491913 | Msa1224510:intron | 30.0% | |
| CTAAAACAAGGAAGAAACAA+AGG | - | chr8_1:89491906-89491925 | Msa1224510:intron | 30.0% | |
| TAAAAAGATAGGTCCTTTCT+TGG | - | chr8_1:89492081-89492100 | Msa1224510:intron | 30.0% | |
| AAAAAGATAGGTCCTTTCTT+GGG | - | chr8_1:89492082-89492101 | Msa1224510:intron | 30.0% | |
| AGTAAAAATATCGATCCACA+AGG | - | chr8_1:89492203-89492222 | Msa1224510:five_prime_UTR | 30.0% | |
| GGATGTGTAAAGTTTGTATT+AGG | - | chr8_1:89492266-89492285 | Msa1224510:five_prime_UTR | 30.0% | |
| ! | TAATTCCTGCAACTGATTCA+TGG | + | chr8_1:89488575-89488594 | None:intergenic | 35.0% |
| ! | CTTTCTAAAAGCAAGGGATT+GGG | - | chr8_1:89488772-89488791 | Msa1224510:three_prime_UTR | 35.0% |
| !! | TCCTTCTAAGGCTTATCAAA+TGG | - | chr8_1:89488796-89488815 | Msa1224510:three_prime_UTR | 35.0% |
| ACCATTTGATAAGCCTTAGA+AGG | + | chr8_1:89488800-89488819 | None:intergenic | 35.0% | |
| GGGATAAATGTAAAGGATGA+AGG | + | chr8_1:89489028-89489047 | None:intergenic | 35.0% | |
| ATACGTGATTCACAACTCAT+TGG | - | chr8_1:89489122-89489141 | Msa1224510:CDS | 35.0% | |
| AGCATCCGTAAGTTTAATCA+AGG | - | chr8_1:89489315-89489334 | Msa1224510:intron | 35.0% | |
| TGTGAGACTGCACATAATAA+TGG | + | chr8_1:89489422-89489441 | None:intergenic | 35.0% | |
| ACCTTTACACAAGTGGTAAT+AGG | + | chr8_1:89489597-89489616 | None:intergenic | 35.0% | |
| ! | GTCTAAAACCTTTACACAAG+TGG | + | chr8_1:89489604-89489623 | None:intergenic | 35.0% |
| !!! | GTAAAGGTTTTAGACATGAC+TGG | - | chr8_1:89489609-89489628 | Msa1224510:intron | 35.0% |
| AGGTACCTTAATGTGATTCA+AGG | + | chr8_1:89489649-89489668 | None:intergenic | 35.0% | |
| AAGTAGCAGTGGAAACTAAA+AGG | + | chr8_1:89489669-89489688 | None:intergenic | 35.0% | |
| ATTCAAGAATCTGGTCCTAT+TGG | + | chr8_1:89489695-89489714 | None:intergenic | 35.0% | |
| AGGATAGTTGAGATCATCAA+TGG | + | chr8_1:89489977-89489996 | None:intergenic | 35.0% | |
| !!! | CATATTTTCAGCTTGTTGGA+AGG | - | chr8_1:89490035-89490054 | Msa1224510:intron | 35.0% |
| ! | TAATAGCATTGGAGTCTGTA+TGG | - | chr8_1:89490137-89490156 | Msa1224510:intron | 35.0% |
| ATAGTGTTAACATCTTGCTG+AGG | + | chr8_1:89490166-89490185 | None:intergenic | 35.0% | |
| ! | ACTAAAGCCATTAGTTTAGC+AGG | - | chr8_1:89490463-89490482 | Msa1224510:CDS | 35.0% |
| ! | AAATGTTAAGGGCATGTATG+TGG | + | chr8_1:89490568-89490587 | None:intergenic | 35.0% |
| ! | AACTAGTTTCAAAGGCTTTG+TGG | + | chr8_1:89490633-89490652 | None:intergenic | 35.0% |
| !! | AAGCCTTTGAAACTAGTTGT+TGG | - | chr8_1:89490635-89490654 | Msa1224510:intron | 35.0% |
| !! | AACTATTCCAATTCTGGAAC+AGG | + | chr8_1:89490743-89490762 | None:intergenic | 35.0% |
| !!! | TATTCCTTTTAGAACGCACA+CGG | - | chr8_1:89491402-89491421 | Msa1224510:intron | 35.0% |
| ! | CCTTCTTTTCTACAGAAATG+TGG | + | chr8_1:89491548-89491567 | None:intergenic | 35.0% |
| CCACATTTCTGTAGAAAAGA+AGG | - | chr8_1:89491545-89491564 | Msa1224510:intron | 35.0% | |
| TGATGTAGTTGTAAAGCTGT+TGG | + | chr8_1:89491637-89491656 | None:intergenic | 35.0% | |
| ! | TTTGATAGCCTAACCTTGAA+TGG | - | chr8_1:89491773-89491792 | Msa1224510:intron | 35.0% |
| ! | CCTTATTTCCATTCAAGGTT+AGG | + | chr8_1:89491784-89491803 | None:intergenic | 35.0% |
| CCTAACCTTGAATGGAAATA+AGG | - | chr8_1:89491781-89491800 | Msa1224510:intron | 35.0% | |
| !! | TTAAACTAGTCTTCAGATGG+TGG | + | chr8_1:89491858-89491877 | None:intergenic | 35.0% |
| GCTCTCAATGATTTCATGAT+AGG | - | chr8_1:89491963-89491982 | Msa1224510:CDS | 35.0% | |
| TGGAGAGGGAATAAAAAGAT+AGG | - | chr8_1:89492070-89492089 | Msa1224510:intron | 35.0% | |
| !!! | AGGGTATGCTCTTTTTTGTA+AGG | - | chr8_1:89492106-89492125 | Msa1224510:CDS | 35.0% |
| !!! | GCTCTTTTTTGTAAGGAGTT+TGG | - | chr8_1:89492113-89492132 | Msa1224510:CDS | 35.0% |
| TGAAATTAACACAGTCCTTG+TGG | + | chr8_1:89492221-89492240 | None:intergenic | 35.0% | |
| CCTGAAAAGTTGTCTGCAAT+GGG | + | chr8_1:89488615-89488634 | None:intergenic | 40.0% | |
| ACCTGAAAAGTTGTCTGCAA+TGG | + | chr8_1:89488616-89488635 | None:intergenic | 40.0% | |
| ! | TGACTCGCTTTCTAAAAGCA+AGG | - | chr8_1:89488765-89488784 | Msa1224510:three_prime_UTR | 40.0% |
| ! | GACTCGCTTTCTAAAAGCAA+GGG | - | chr8_1:89488766-89488785 | Msa1224510:three_prime_UTR | 40.0% |
| ! | GCTTTCTAAAAGCAAGGGAT+TGG | - | chr8_1:89488771-89488790 | Msa1224510:three_prime_UTR | 40.0% |
| TCACAACTCATTGGATTGTC+CGG | - | chr8_1:89489131-89489150 | Msa1224510:CDS | 40.0% | |
| !!! | ATCAAGGTGTTGCTTTTCGT+TGG | - | chr8_1:89489331-89489350 | Msa1224510:intron | 40.0% |
| ATATCGCGATCGTGTAATCT+TGG | - | chr8_1:89489455-89489474 | Msa1224510:intron | 40.0% | |
| TTCTTCTGACTCTCGTGATA+TGG | - | chr8_1:89489538-89489557 | Msa1224510:intron | 40.0% | |
| GCCTATTACCACTTGTGTAA+AGG | - | chr8_1:89489593-89489612 | Msa1224510:intron | 40.0% | |
| ! | TGCACTACTGTTGATTGGTT+CGG | + | chr8_1:89489778-89489797 | None:intergenic | 40.0% |
| TCAGATGCACTACTGTTGAT+TGG | + | chr8_1:89489783-89489802 | None:intergenic | 40.0% | |
| AGATGTTGTTCCTTATGGCT+TGG | - | chr8_1:89490090-89490109 | Msa1224510:intron | 40.0% | |
| ! | AGAAAAGTGCAGGTCTTATC+AGG | - | chr8_1:89490229-89490248 | Msa1224510:intron | 40.0% |
| !! | AACTAATGGCTTTAGTAGCG+TGG | + | chr8_1:89490459-89490478 | None:intergenic | 40.0% |
| ! | AAGCCATTAGTTTAGCAGGA+TGG | - | chr8_1:89490467-89490486 | Msa1224510:CDS | 40.0% |
| GTTCCATCCTGCTAAACTAA+TGG | + | chr8_1:89490473-89490492 | None:intergenic | 40.0% | |
| AGTTTAGCAGGATGGAACAT+AGG | - | chr8_1:89490475-89490494 | Msa1224510:CDS | 40.0% | |
| TGGAGACATTCTCTAATCTG+AGG | + | chr8_1:89490522-89490541 | None:intergenic | 40.0% | |
| AGTATTGCCTGTTCCAGAAT+TGG | - | chr8_1:89490733-89490752 | Msa1224510:CDS | 40.0% | |
| !! | GAAAGTGCTCAATTAGTCTG+TGG | - | chr8_1:89490782-89490801 | Msa1224510:intron | 40.0% |
| TAAAGTGCACCGAACGTTTA+CGG | + | chr8_1:89491214-89491233 | None:intergenic | 40.0% | |
| ! | ATTACCGTGTGCGTTCTAAA+AGG | + | chr8_1:89491409-89491428 | None:intergenic | 40.0% |
| TTCTGTAGAAAAGAAGGCTC+TGG | - | chr8_1:89491551-89491570 | Msa1224510:intron | 40.0% | |
| ! | TTGTAAAGCTGTTGGTGAAG+GGG | + | chr8_1:89491629-89491648 | None:intergenic | 40.0% |
| ! | GTTGTAAAGCTGTTGGTGAA+GGG | + | chr8_1:89491630-89491649 | None:intergenic | 40.0% |
| ! | AGTTGTAAAGCTGTTGGTGA+AGG | + | chr8_1:89491631-89491650 | None:intergenic | 40.0% |
| TGAAATGATCCCTGCTTGAT+GGG | + | chr8_1:89491692-89491711 | None:intergenic | 40.0% | |
| ATGAAATGATCCCTGCTTGA+TGG | + | chr8_1:89491693-89491712 | None:intergenic | 40.0% | |
| ACCCCAAACTTGTAGAAAAC+TGG | - | chr8_1:89491936-89491955 | Msa1224510:CDS | 40.0% | |
| ! | CCCAGTTTTCTACAAGTTTG+GGG | + | chr8_1:89491940-89491959 | None:intergenic | 40.0% |
| CCCCAAACTTGTAGAAAACT+GGG | - | chr8_1:89491937-89491956 | Msa1224510:CDS | 40.0% | |
| ! | CCCCAGTTTTCTACAAGTTT+GGG | + | chr8_1:89491941-89491960 | None:intergenic | 40.0% |
| CCCAAACTTGTAGAAAACTG+GGG | - | chr8_1:89491938-89491957 | Msa1224510:CDS | 40.0% | |
| ! | ACCCCAGTTTTCTACAAGTT+TGG | + | chr8_1:89491942-89491961 | None:intergenic | 40.0% |
| AAACTTGTAGAAAACTGGGG+TGG | - | chr8_1:89491941-89491960 | Msa1224510:CDS | 40.0% | |
| GAGTTAGGCCTTTAGTAGTA+TGG | - | chr8_1:89492050-89492069 | Msa1224510:intron | 40.0% | |
| TTCCCTCTCCATACTACTAA+AGG | + | chr8_1:89492061-89492080 | None:intergenic | 40.0% | |
| ! | AGTTTGTATTAGGTTGCCCT+AGG | - | chr8_1:89492276-89492295 | Msa1224510:five_prime_UTR | 40.0% |
| AAACCAAACCTTACTGCCTA+GGG | + | chr8_1:89492295-89492314 | None:intergenic | 40.0% | |
| AAAACCAAACCTTACTGCCT+AGG | + | chr8_1:89492296-89492315 | None:intergenic | 40.0% | |
| GGATTCCATGAATCAGTTGC+AGG | - | chr8_1:89488567-89488586 | Msa1224510:three_prime_UTR | 45.0% | |
| GAAAAGTTGTCTGCAATGGG+TGG | + | chr8_1:89488612-89488631 | None:intergenic | 45.0% | |
| ! | CCCATTGCAGACAACTTTTC+AGG | - | chr8_1:89488612-89488631 | Msa1224510:three_prime_UTR | 45.0% |
| AAGGGATTGGGATCCTTCTA+AGG | - | chr8_1:89488784-89488803 | Msa1224510:three_prime_UTR | 45.0% | |
| CACAACTCATTGGATTGTCC+GGG | - | chr8_1:89489132-89489151 | Msa1224510:CDS | 45.0% | |
| ATTGTCCGGGTATACAAGAG+AGG | - | chr8_1:89489145-89489164 | Msa1224510:CDS | 45.0% | |
| AAGACAGGAAGACCCTGAAA+AGG | + | chr8_1:89489262-89489281 | None:intergenic | 45.0% | |
| GGTCTTCCTGTCTTTGCAAT+TGG | - | chr8_1:89489268-89489287 | Msa1224510:intron | 45.0% | |
| CCAACACCAATTGCAAAGAC+AGG | + | chr8_1:89489277-89489296 | None:intergenic | 45.0% | |
| CCTGTCTTTGCAATTGGTGT+TGG | - | chr8_1:89489274-89489293 | Msa1224510:intron | 45.0% | |
| CTCGGCCTTGAATCACATTA+AGG | - | chr8_1:89489641-89489660 | Msa1224510:intron | 45.0% | |
| CCTATTGGATCAAGTAGCAG+TGG | + | chr8_1:89489680-89489699 | None:intergenic | 45.0% | |
| ! | CCACTGCTACTTGATCCAAT+AGG | - | chr8_1:89489677-89489696 | Msa1224510:intron | 45.0% |
| ! | GCACTACTGTTGATTGGTTC+GGG | + | chr8_1:89489777-89489796 | None:intergenic | 45.0% |
| CATGCAGAAACCAAGCCATA+AGG | + | chr8_1:89490103-89490122 | None:intergenic | 45.0% | |
| !!! | TGAAGCCACTTTTACACGAG+AGG | - | chr8_1:89490200-89490219 | Msa1224510:intron | 45.0% |
| CTTGTCCTCTCGTGTAAAAG+TGG | + | chr8_1:89490208-89490227 | None:intergenic | 45.0% | |
| ! | GAGGACAAGAAGAAAAGTGC+AGG | - | chr8_1:89490219-89490238 | Msa1224510:intron | 45.0% |
| ! | CAAAGGCTTTGTGGAGTGTA+AGG | + | chr8_1:89490624-89490643 | None:intergenic | 45.0% |
| TCTACACTTTCAACTGCGGT+TGG | + | chr8_1:89490707-89490726 | None:intergenic | 45.0% | |
| CTTTGTGGTCCGTAAACGTT+CGG | - | chr8_1:89491202-89491221 | Msa1224510:intron | 45.0% | |
| GGATCATCCAGACATTCAGA+AGG | - | chr8_1:89491572-89491591 | Msa1224510:CDS | 45.0% | |
| TCATCCAGACATTCAGAAGG+TGG | - | chr8_1:89491575-89491594 | Msa1224510:CDS | 45.0% | |
| AAGCGAGAACTGCTATTCCT+TGG | - | chr8_1:89491598-89491617 | Msa1224510:CDS | 45.0% | |
| CAAGCAGGGATCATTTCATG+TGG | - | chr8_1:89491694-89491713 | Msa1224510:intron | 45.0% | |
| TGTGGAATTTCCAGAACCTC+CGG | - | chr8_1:89491712-89491731 | Msa1224510:intron | 45.0% | |
| ! | GAACAATTGGACTAGAGCAC+AGG | - | chr8_1:89491811-89491830 | Msa1224510:intron | 45.0% |
| AGGCCTTTAGTAGTATGGAG+AGG | - | chr8_1:89492055-89492074 | Msa1224510:intron | 45.0% | |
| GGCCTTTAGTAGTATGGAGA+GGG | - | chr8_1:89492056-89492075 | Msa1224510:intron | 45.0% | |
| AGATAGGTCCTTTCTTGGGA+AGG | - | chr8_1:89492086-89492105 | Msa1224510:intron | 45.0% | |
| GATAGGTCCTTTCTTGGGAA+GGG | - | chr8_1:89492087-89492106 | Msa1224510:intron | 45.0% | |
| TAGCAAGCGCGTTATACGTT+AGG | - | chr8_1:89492245-89492264 | Msa1224510:five_prime_UTR | 45.0% | |
| !! | TCAAATATAAATAAATATAT+TGG | - | chr8_1:89488660-89488679 | Msa1224510:three_prime_UTR | 5.0% |
| GAGCACCTCTCTTGTATACC+CGG | + | chr8_1:89489153-89489172 | None:intergenic | 50.0% | |
| !!! | GGTGTTGCTTTTCGTTGGAG+CGG | - | chr8_1:89489336-89489355 | Msa1224510:intron | 50.0% |
| CCATGCTTCTTCGATGCAGA+AGG | + | chr8_1:89489570-89489589 | None:intergenic | 50.0% | |
| CCTTCTGCATCGAAGAAGCA+TGG | - | chr8_1:89489567-89489586 | Msa1224510:intron | 50.0% | |
| ! | CTGCATCGAAGAAGCATGGA+CGG | - | chr8_1:89489571-89489590 | Msa1224510:intron | 50.0% |
| ! | GTGCAGGTCTTATCAGGATG+CGG | - | chr8_1:89490235-89490254 | Msa1224510:intron | 50.0% |
| ATGGAACATAGGTGCCTGCT+TGG | - | chr8_1:89490486-89490505 | Msa1224510:CDS | 50.0% | |
| GAGGCAAACAAATGCCAAGC+AGG | + | chr8_1:89490503-89490522 | None:intergenic | 50.0% | |
| ! | GGCTTTGTGGAGTGTAAGGA+GGG | + | chr8_1:89490620-89490639 | None:intergenic | 50.0% |
| ! | AGGCTTTGTGGAGTGTAAGG+AGG | + | chr8_1:89490621-89490640 | None:intergenic | 50.0% |
| CGAACGTTTACGGACCACAA+AGG | + | chr8_1:89491204-89491223 | None:intergenic | 50.0% | |
| GCTTCCACCTTCTGAATGTC+TGG | + | chr8_1:89491582-89491601 | None:intergenic | 50.0% | |
| TTGGTGAAGGGGATGATCCA+AGG | + | chr8_1:89491618-89491637 | None:intergenic | 50.0% | |
| ! | TGATGGGTGCAACAGCTTCA+CGG | + | chr8_1:89491676-89491695 | None:intergenic | 50.0% |
| ATTTCCAGAACCTCCGGATG+TGG | - | chr8_1:89491718-89491737 | Msa1224510:intron | 50.0% | |
| AACCTCCGGATGTGGATACA+AGG | - | chr8_1:89491726-89491745 | Msa1224510:intron | 50.0% | |
| ACCTCCGGATGTGGATACAA+GGG | - | chr8_1:89491727-89491746 | Msa1224510:intron | 50.0% | |
| GCAACCCTTGTATCCACATC+CGG | + | chr8_1:89491734-89491753 | None:intergenic | 50.0% | |
| AGCACAGGCCTAATCCAAGA+CGG | - | chr8_1:89491826-89491845 | Msa1224510:intron | 50.0% | |
| GAGCATACCCTTCCCAAGAA+AGG | + | chr8_1:89492097-89492116 | None:intergenic | 50.0% | |
| ! | TTAGGTTGCCCTAGGCAGTA+AGG | - | chr8_1:89492284-89492303 | Msa1224510:five_prime_UTR | 50.0% |
| TTGCCCTAGGCAGTAAGGTT+TGG | - | chr8_1:89492289-89492308 | Msa1224510:five_prime_UTR | 50.0% | |
| !! | CATGACTGGCCTGAAGCTCT+CGG | - | chr8_1:89489623-89489642 | Msa1224510:intron | 55.0% |
| GATTCAAGGCCGAGAGCTTC+AGG | + | chr8_1:89489635-89489654 | None:intergenic | 55.0% | |
| CTTATCAGGATGCGGACGAG+AGG | - | chr8_1:89490243-89490262 | Msa1224510:intron | 55.0% | |
| TGCAACAGCTTCACGGAGTC+TGG | + | chr8_1:89491669-89491688 | None:intergenic | 55.0% | |
| AGCTGTTGCACCCATCAAGC+AGG | - | chr8_1:89491679-89491698 | Msa1224510:intron | 55.0% | |
| GCTGTTGCACCCATCAAGCA+GGG | - | chr8_1:89491680-89491699 | Msa1224510:intron | 55.0% | |
| GTATCCACATCCGGAGGTTC+TGG | + | chr8_1:89491725-89491744 | None:intergenic | 55.0% | |
| ACCCTTGTATCCACATCCGG+AGG | + | chr8_1:89491731-89491750 | None:intergenic | 55.0% | |
| GGCTTGAGCCGTCTTGGATT+AGG | + | chr8_1:89491837-89491856 | None:intergenic | 55.0% | |
| ! | GATGGTGGCTTGAGCCGTCT+TGG | + | chr8_1:89491843-89491862 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 89488355 | 89492381 | 89488355 | ID=Msa1224510;Name=Msa1224510 |
| chr8_1 | mRNA | 89488355 | 89492381 | 89488355 | ID=Msa1224510-mRNA-1;Parent=Msa1224510;Name=Msa1224510-mRNA-1;_AED=0.08;_eAED=0.08;_QI=190|1|1|1|0.9|0.81|11|543|330 |
| chr8_1 | exon | 89488355 | 89489212 | 89488355 | ID=Msa1224510-mRNA-1:exon:32526;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89490460 | 89490540 | 89490460 | ID=Msa1224510-mRNA-1:exon:32525;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89490680 | 89490781 | 89490680 | ID=Msa1224510-mRNA-1:exon:32524;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89491074 | 89491169 | 89491074 | ID=Msa1224510-mRNA-1:exon:32523;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89491260 | 89491319 | 89491260 | ID=Msa1224510-mRNA-1:exon:32522;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89491415 | 89491468 | 89491415 | ID=Msa1224510-mRNA-1:exon:32521;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89491570 | 89491647 | 89491570 | ID=Msa1224510-mRNA-1:exon:32520;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89491734 | 89491787 | 89491734 | ID=Msa1224510-mRNA-1:exon:32519;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89491919 | 89492002 | 89491919 | ID=Msa1224510-mRNA-1:exon:32518;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89492103 | 89492344 | 89492103 | ID=Msa1224510-mRNA-1:exon:32517;Parent=Msa1224510-mRNA-1 |
| chr8_1 | exon | 89492365 | 89492381 | 89492365 | ID=Msa1224510-mRNA-1:exon:32516;Parent=Msa1224510-mRNA-1 |
| chr8_1 | five_prime_UTR | 89492365 | 89492381 | 89492365 | ID=Msa1224510-mRNA-1:five_prime_utr;Parent=Msa1224510-mRNA-1 |
| chr8_1 | five_prime_UTR | 89492172 | 89492344 | 89492172 | ID=Msa1224510-mRNA-1:five_prime_utr;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89492103 | 89492171 | 89492103 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89491919 | 89492002 | 89491919 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89491734 | 89491787 | 89491734 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89491570 | 89491647 | 89491570 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89491415 | 89491468 | 89491415 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89491260 | 89491319 | 89491260 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89491074 | 89491169 | 89491074 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89490680 | 89490781 | 89490680 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89490460 | 89490540 | 89490460 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | CDS | 89488898 | 89489212 | 89488898 | ID=Msa1224510-mRNA-1:cds;Parent=Msa1224510-mRNA-1 |
| chr8_1 | three_prime_UTR | 89488355 | 89488897 | 89488355 | ID=Msa1224510-mRNA-1:three_prime_utr;Parent=Msa1224510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
