AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0393100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0393100 MtrunA17_Chr3g0078371 98.434 1213 19 0 1 1213 1 1213 0.0 2481
Msa0393100 MtrunA17_Chr8g0355251 76.280 1172 257 6 58 1211 7 1175 0.0 1808
Msa0393100 MtrunA17_Chr7g0244991 57.458 1133 425 8 115 1192 137 1267 0.0 1308
Msa0393100 MtrunA17_Chr5g0415271 36.786 1120 639 21 121 1189 24 1125 0.0 718
Msa0393100 MtrunA17_Chr8g0363911 36.395 1154 635 21 121 1210 44 1162 0.0 706
Msa0393100 MtrunA17_Chr4g0062251 36.719 1073 603 16 120 1133 38 1093 0.0 684
Msa0393100 MtrunA17_Chr2g0329991 35.264 1157 653 19 120 1199 40 1177 0.0 678
Msa0393100 MtrunA17_Chr8g0342811 35.690 1160 644 25 120 1199 40 1177 0.0 676
Msa0393100 MtrunA17_Chr6g0450601 36.549 1130 631 24 120 1178 37 1151 0.0 671
Msa0393100 MtrunA17_Chr8g0368691 35.393 1133 660 18 137 1208 67 1188 0.0 671
Msa0393100 MtrunA17_Chr3g0091611 36.396 1110 645 18 120 1178 35 1134 0.0 655
Msa0393100 MtrunA17_Chr0c05g0492131 35.542 1117 648 19 120 1178 33 1135 0.0 649
Msa0393100 MtrunA17_Chr2g0324791 32.904 1088 650 20 121 1190 3 1028 2.74e-180 560
Msa0393100 MtrunA17_Chr1g0173111 23.429 525 262 15 421 934 380 775 5.24e-18 90.1
Msa0393100 MtrunA17_Chr8g0382071 23.320 506 254 16 440 934 396 778 1.56e-17 88.6
Msa0393100 MtrunA17_Chr8g0346461 24.670 531 288 17 491 986 352 805 1.43e-16 85.5
Msa0393100 MtrunA17_Chr4g0020551 23.772 509 246 18 443 934 330 713 1.82e-14 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0393100 AT5G04930.1 69.673 1131 327 10 73 1197 26 1146 0.0 1665
Msa0393100 AT1G59820.1 36.031 1174 663 25 88 1203 3 1146 0.0 717
Msa0393100 AT3G27870.1 36.530 1147 655 20 120 1207 37 1169 0.0 711
Msa0393100 AT1G68710.2 36.502 1115 643 19 120 1178 41 1146 0.0 700
Msa0393100 AT1G68710.1 36.502 1115 643 19 120 1178 41 1146 0.0 700
Msa0393100 AT1G26130.2 36.010 1158 661 21 120 1212 41 1183 0.0 696
Msa0393100 AT1G26130.4 36.010 1158 661 21 120 1212 41 1183 0.0 696
Msa0393100 AT1G26130.3 36.010 1158 661 21 120 1212 41 1183 0.0 696
Msa0393100 AT1G26130.1 35.942 1163 654 21 120 1212 41 1182 0.0 695
Msa0393100 AT3G25610.1 37.176 1119 627 21 120 1178 39 1141 0.0 691
Msa0393100 AT3G13900.1 36.253 1153 635 25 121 1191 41 1175 0.0 689
Msa0393100 AT1G54280.2 35.671 1155 641 21 121 1191 41 1177 0.0 688
Msa0393100 AT1G54280.3 35.671 1155 641 21 121 1191 41 1177 0.0 688
Msa0393100 AT1G54280.1 35.671 1155 641 21 121 1191 41 1177 0.0 688
Msa0393100 AT1G68710.3 35.670 1141 643 20 120 1178 41 1172 0.0 686
Msa0393100 AT1G17500.2 35.166 1146 659 24 120 1202 40 1164 0.0 676
Msa0393100 AT1G17500.1 35.166 1146 659 24 120 1202 40 1164 0.0 676
Msa0393100 AT1G72700.1 34.286 1155 669 20 120 1202 40 1176 0.0 667
Msa0393100 AT1G72700.3 34.286 1155 669 20 120 1202 40 1176 0.0 667
Msa0393100 AT1G72700.2 34.286 1155 669 20 120 1202 40 1176 0.0 667
Msa0393100 AT1G13210.1 35.607 1129 644 23 120 1183 37 1147 0.0 665
Msa0393100 AT3G27870.2 38.941 963 527 16 120 1034 37 986 0.0 659
Msa0393100 AT3G13900.2 38.841 932 481 22 121 979 41 956 0.0 601
Msa0393100 AT3G27870.3 35.520 991 568 18 275 1207 1 978 0.0 581
Msa0393100 AT5G44240.2 32.708 1119 664 23 121 1213 3 1058 1.03e-178 556
Msa0393100 AT5G44240.1 32.708 1119 664 23 121 1213 35 1090 5.63e-178 555
Msa0393100 AT3G13900.3 37.338 924 483 23 121 975 41 937 1.02e-177 551
Msa0393100 AT1G07670.2 23.086 810 455 35 209 986 132 805 6.69e-15 80.5
Msa0393100 AT1G07670.1 23.086 810 455 35 209 986 132 805 6.69e-15 80.5
Msa0393100 AT4G00900.2 24.277 346 196 12 658 986 505 801 2.90e-14 78.6
Msa0393100 AT4G00900.1 24.277 346 196 12 658 986 505 801 2.90e-14 78.6

Find 222 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCTCAACTTGCAGTATT+TGG 0.147533 3_2:+7071448 Msa0393100:CDS
TCCTTGTTCTTGTCCTATTT+TGG 0.168882 3_2:+7074741 Msa0393100:CDS
GAAAGCAATGTTTCCATATT+AGG 0.180689 3_2:+7073835 Msa0393100:CDS
TGAATCTGTTGCCTTATTAT+AGG 0.187667 3_2:+7072148 Msa0393100:CDS
GACTCTTGCAGTGGTTATTT+TGG 0.189604 3_2:+7075537 Msa0393100:CDS
CTTGAACTTGACTTTGATTT+TGG 0.194455 3_2:-7071004 None:intergenic
TATTGCTTTGTACATTTCTA+TGG 0.204359 3_2:+7072281 Msa0393100:CDS
TATTGATCATTTGGTGTTCT+TGG 0.208433 3_2:-7070950 None:intergenic
GGTTTAAGAACACTTGTTAT+TGG 0.228096 3_2:+7073700 Msa0393100:CDS
ATATGGATTTATGGCGAATA+TGG 0.231340 3_2:+7071855 Msa0393100:CDS
TAGGAATATATATGGATTTA+TGG 0.232364 3_2:+7071846 Msa0393100:CDS
GGATTGTGACTTACCAAAAT+AGG 0.232979 3_2:-7074754 None:intergenic
CTAACTTTCACCTTCATCTT+TGG 0.247529 3_2:-7072993 None:intergenic
TTGAATATTAATGAAGATTT+GGG 0.249431 3_2:+7072393 Msa0393100:CDS
TTTCAAGTACTGGACTGTTC+TGG 0.249751 3_2:+7076351 Msa0393100:CDS
TGTAAAGTTGCATATACTTT+AGG 0.260617 3_2:+7076588 Msa0393100:three_prime_UTR
TTTGAATATTAATGAAGATT+TGG 0.266623 3_2:+7072392 Msa0393100:CDS
GGCAAAGCATGGTTGTATTT+TGG 0.266627 3_2:+7075455 Msa0393100:CDS
ATGAGTAGTTTAAACCATTC+AGG 0.284184 3_2:+7071163 Msa0393100:CDS
AGAAGAAATGGAAGGATATT+CGG 0.285843 3_2:+7071617 Msa0393100:CDS
GCGGCAAGCACTGCGGTATT+TGG 0.286706 3_2:+7073775 Msa0393100:CDS
CACAGCATTGCTTCCACGTT+TGG 0.291090 3_2:+7076397 Msa0393100:CDS
CAGATAAAGTTGAGAATAAC+AGG 0.292097 3_2:+7071557 Msa0393100:CDS
GGCCTCCACTCTTTGCATAT+TGG 0.293028 3_2:+7075476 Msa0393100:CDS
TTCTTTCATGTTTCAAGTAC+TGG 0.299241 3_2:+7076341 Msa0393100:CDS
TATCAAAGAGTTGCTGAAAA+TGG 0.301203 3_2:+7076494 Msa0393100:CDS
GAGCAGCAGGGATTAAAGTT+TGG 0.310183 3_2:+7073917 Msa0393100:CDS
TACTTATAGTCTTCAACTTC+CGG 0.312037 3_2:-7072189 None:intergenic
GATAGCAGATGCTCCTAATA+TGG 0.312880 3_2:-7073848 None:intergenic
CAAGAAACTGCTATATCTAT+TGG 0.319476 3_2:+7073958 Msa0393100:CDS
AAATCAAGTTTCCTATAATA+AGG 0.322804 3_2:-7072159 None:intergenic
GGTGACTCATGCTGTCATTT+GGG 0.323672 3_2:+7075600 Msa0393100:CDS
TTGAAAATGTGGAAGGAAAA+AGG 0.324840 3_2:+7073048 Msa0393100:CDS
ATTTACAACATAACAAACTA+TGG 0.331117 3_2:-7076719 None:intergenic
TATAAAGTTGAGGATACTTT+AGG 0.331612 3_2:-7075366 None:intergenic
ATAGATTACTTCTCTTATCT+TGG 0.335329 3_2:-7076551 None:intergenic
GTAGGAATATATTGATCATT+TGG 0.337392 3_2:-7070959 None:intergenic
AAAGCTATGCTTAACAATTC+AGG 0.338099 3_2:+7071991 Msa0393100:CDS
ATCATCTTCGATCATGAAAT+AGG 0.341891 3_2:-7072325 None:intergenic
AGCAGCAGGGATTAAAGTTT+GGG 0.341999 3_2:+7073918 Msa0393100:CDS
ATGCTTATCGAACGAACTTC+CGG 0.343357 3_2:+7073221 Msa0393100:CDS
AAACCGAATAGGAATATATA+TGG 0.343990 3_2:+7071838 Msa0393100:CDS
CAGATAGCTTTGATTATTGA+TGG 0.344102 3_2:+7074108 Msa0393100:CDS
TTCTATGTTCATTCATTCAA+TGG 0.348996 3_2:+7071108 Msa0393100:CDS
AATCCATATATATTCCTATT+CGG 0.351031 3_2:-7071841 None:intergenic
ACAGATTCAACTCGTCCTTA+TGG 0.361871 3_2:-7072134 None:intergenic
GTAGTTTCATTGAGAAGAAA+TGG 0.367508 3_2:+7071605 Msa0393100:CDS
GCACTACCAACTATTATTGT+TGG 0.369353 3_2:+7075310 Msa0393100:CDS
GGGTGACTCATGCTGTCATT+TGG 0.373060 3_2:+7075599 Msa0393100:CDS
TGGATGTTGTTAGATGGTAT+TGG 0.375279 3_2:+7075578 Msa0393100:CDS
CTTGGTTGATGATATGAGAT+AGG 0.382046 3_2:-7076533 None:intergenic
GAAGACTAGGTATGCAAAAC+AGG 0.383243 3_2:+7071765 Msa0393100:CDS
TATGCCAATGCTTGTTCATC+AGG 0.385750 3_2:-7073176 None:intergenic
GAAGAAATGGAAGGATATTC+GGG 0.386577 3_2:+7071618 Msa0393100:CDS
TTGAATCATTGATACATCAT+TGG 0.390428 3_2:-7074546 None:intergenic
TCCTTTCATTCTATAATCAA+TGG 0.397649 3_2:-7076744 None:intergenic
GTTGAAGACTATAAGTACTA+TGG 0.403402 3_2:+7072195 Msa0393100:CDS
TTCAAGTACTGGACTGTTCT+GGG 0.403555 3_2:+7076352 Msa0393100:CDS
GTGCAAACTATTAATCTTGA+TGG 0.406142 3_2:+7071730 Msa0393100:CDS
AATAGGCACAATAGTATTGC+AGG 0.407285 3_2:-7073099 None:intergenic
ATAGAAATGTACAAAGCAAT+AGG 0.408488 3_2:-7072279 None:intergenic
CTTGCCAATTGCAAAAGCTC+TGG 0.412829 3_2:-7073017 None:intergenic
ATTGAGTCGCTGAGAGCAGC+AGG 0.413874 3_2:+7073904 Msa0393100:CDS
AACTGTTCAAACAAATTCCT+TGG 0.414617 3_2:-7071376 None:intergenic
CGCAGTGCTTGCCGCTTCAT+AGG 0.416409 3_2:-7073767 None:intergenic
TAACAAGTGTTCTTAAACCT+AGG 0.418411 3_2:-7073696 None:intergenic
GATGCTATACCTCAACTTCC+TGG 0.419239 3_2:+7075661 Msa0393100:CDS
TGGCTATGGATGTTGTTAGA+TGG 0.420700 3_2:+7075572 Msa0393100:CDS
CTTCACTCTTACTCTTCCCT+AGG 0.420906 3_2:+7073679 Msa0393100:CDS
GGATGTTGTTAGATGGTATT+GGG 0.425040 3_2:+7075579 Msa0393100:CDS
GGAGCTTGTTCGTGTTGGCC+AGG 0.428817 3_2:+7072302 Msa0393100:CDS
AAGGTTCAACCGAGGTATAC+TGG 0.433990 3_2:+7071799 Msa0393100:CDS
TCGGGCGTGTCGACAACAAT+AGG 0.445529 3_2:-7073116 None:intergenic
CATTGCAGGTTCAATGTGTT+GGG 0.447966 3_2:+7073499 Msa0393100:intron
CACATAGTCATTGATATTCA+TGG 0.453838 3_2:+7073245 Msa0393100:CDS
CGTCTGTTTGTGCTGCGGTT+TGG 0.454477 3_2:+7072103 Msa0393100:CDS
TCTATGTTCATTCATTCAAT+GGG 0.455002 3_2:+7071109 Msa0393100:CDS
TAGCAAGCATAGGAGACCTT+TGG 0.458552 3_2:+7075515 Msa0393100:CDS
CTCAGCGACTCAATTGCTTC+CGG 0.460307 3_2:-7073895 None:intergenic
CACTGGAATTATCAAAGGCT+TGG 0.461744 3_2:+7074683 Msa0393100:CDS
CTGTTCTGGGCATTGTTGCT+AGG 0.462546 3_2:+7076365 Msa0393100:CDS
GCATATGCCGCTGCTGCCTA+TGG 0.463722 3_2:+7073194 Msa0393100:CDS
CAAGCACTGCGGTATTTGGT+CGG 0.464775 3_2:+7073779 Msa0393100:CDS
AGAGGGTAGGCAAGCTGTAA+TGG 0.465745 3_2:+7074601 Msa0393100:CDS
TCAACCAACATTGTGCTTAG+AGG 0.467223 3_2:+7071907 Msa0393100:CDS
AAAAGAATGTCGGTTATACT+AGG 0.468898 3_2:+7073547 Msa0393100:CDS
TACCTCAACTTCCTGGCTAC+TGG 0.470827 3_2:+7075668 Msa0393100:CDS
GGTCAATTTACATTTGGCTA+TGG 0.472950 3_2:+7075558 Msa0393100:CDS
AACTCAATCAAAGTTACGTT+GGG 0.474320 3_2:+7076865 Msa0393100:three_prime_UTR
ACCATTGATTATAGAATGAA+AGG 0.475014 3_2:+7076743 Msa0393100:three_prime_UTR
TAGAGATGAAGATGCAAGAT+TGG 0.476919 3_2:+7071261 Msa0393100:CDS
TCTGCACTGAAACTTTGTAT+TGG 0.477333 3_2:-7072367 None:intergenic
TATCCTCAACTTTATAGTGC+TGG 0.490459 3_2:+7075373 Msa0393100:CDS
GATCTTAAAGCCAAAGATGA+AGG 0.490950 3_2:+7072983 Msa0393100:CDS
TCGAGTGGCTCCACTACAAA+AGG 0.491820 3_2:+7074329 Msa0393100:CDS
GTTCCTCTCTTATTGATACA+TGG 0.491866 3_2:+7074659 Msa0393100:CDS
CAATTCTCACTTTCATTCCA+AGG 0.492949 3_2:+7071359 Msa0393100:CDS
ATATGTTTCGATTCTACCGT+TGG 0.493139 3_2:+7071474 Msa0393100:CDS
TATGTGTTCTCAGATAAAAC+TGG 0.493604 3_2:+7072426 Msa0393100:CDS
ACCTAGTTCATTCTCCATGC+CGG 0.494884 3_2:-7072520 None:intergenic
GGTAAACTATAACTGACATA+AGG 0.496795 3_2:-7072245 None:intergenic
CACTGTCGAGTATGTGTACA+AGG 0.498887 3_2:-7074137 None:intergenic
TAAGTACTATGGATGGGGAT+TGG 0.499992 3_2:+7072206 Msa0393100:CDS
AAGCACTGCGGTATTTGGTC+GGG 0.500000 3_2:+7073780 Msa0393100:CDS
TAATCTAACAGCTTCACATC+AGG 0.504269 3_2:-7073140 None:intergenic
GTGAGCTTAAGAATACTAGT+TGG 0.504413 3_2:+7071932 Msa0393100:CDS
CTAGAAATTTGAATATCACT+AGG 0.504990 3_2:-7076449 None:intergenic
AACAGCTTCACATCAGGATC+GGG 0.506452 3_2:-7073134 None:intergenic
CAACAACTGCAATAAATGAA+TGG 0.507660 3_2:+7075257 Msa0393100:CDS
TACACTTACTGAAAATAAGA+TGG 0.509982 3_2:+7072449 Msa0393100:CDS
TATGTCAGTTATAGTTTACC+AGG 0.510492 3_2:+7072248 Msa0393100:CDS
AGAATTCCAACAATAATAGT+TGG 0.512924 3_2:-7075316 None:intergenic
AAGAATACTAGTTGGGCGCT+TGG 0.513157 3_2:+7071940 Msa0393100:CDS
TAACAATGGTTGATACTTTG+TGG 0.514157 3_2:+7075434 Msa0393100:CDS
TTATCAACTAGTGATCCAAC+TGG 0.515769 3_2:+7071697 Msa0393100:CDS
TACTAGTTGGGCGCTTGGTG+TGG 0.516820 3_2:+7071945 Msa0393100:CDS
TCTTATTGATACATGGTCAC+TGG 0.520717 3_2:+7074666 Msa0393100:CDS
ACATTGCAGGTTCAATGTGT+TGG 0.525171 3_2:+7073498 Msa0393100:intron
AAGACTATAAGTACTATGGA+TGG 0.525277 3_2:+7072199 Msa0393100:CDS
CAGAGAATTTCTCTATGTTG+CGG 0.525914 3_2:+7076617 Msa0393100:three_prime_UTR
TCAGTAAAACTCTTTGTCAA+AGG 0.526985 3_2:+7073583 Msa0393100:CDS
ACTGTGAGGTATGGTTCAAA+AGG 0.527275 3_2:+7071196 Msa0393100:CDS
TGATGTATCAATGATTCAAA+TGG 0.529532 3_2:+7074550 Msa0393100:CDS
TGAGCTTAAGAATACTAGTT+GGG 0.531877 3_2:+7071933 Msa0393100:CDS
TGCACATATGCAACACCAGT+TGG 0.534022 3_2:-7071712 None:intergenic
TTAAGTGTGAGAAACCGAAT+AGG 0.534933 3_2:+7071827 Msa0393100:CDS
CTTGGAGATTGTAACAAAAG+TGG 0.536497 3_2:-7070932 None:intergenic
TCTATGGAGCTTGTTCGTGT+TGG 0.537946 3_2:+7072297 Msa0393100:CDS
GTCTCAAAGATGCTCTTGAA+AGG 0.539452 3_2:+7074058 Msa0393100:CDS
TTGTTTCCCTTGTGAAGAAG+AGG 0.541963 3_2:+7074358 Msa0393100:CDS
GATGTTGGAGTTGGTATAAG+TGG 0.542521 3_2:+7074575 Msa0393100:CDS
GGTTTGGTTGAAGCGCCATA+AGG 0.542751 3_2:+7072119 Msa0393100:CDS
TATTGCAGTTGTTGAAGTGA+AGG 0.546160 3_2:-7075248 None:intergenic
GACTATAAGTACTATGGATG+GGG 0.549175 3_2:+7072201 Msa0393100:CDS
ATCGCCTGATGAACAAGCAT+TGG 0.549505 3_2:+7073172 Msa0393100:CDS
TAGTTGGGCGCTTGGTGTGG+CGG 0.551238 3_2:+7071948 Msa0393100:CDS
GTGAGTCTAATTTGAAGACT+AGG 0.551484 3_2:+7071752 Msa0393100:CDS
AACAAGTGTTCTTAAACCTA+GGG 0.551707 3_2:-7073695 None:intergenic
GCACTTCAGAGTTTGAAGAA+TGG 0.552085 3_2:+7073737 Msa0393100:CDS
AGTACTTGAAACATGAAAGA+AGG 0.553632 3_2:-7076339 None:intergenic
TAACAGCTTCACATCAGGAT+CGG 0.554034 3_2:-7073135 None:intergenic
CAGATGTCCTCTTCTTCACA+AGG 0.555279 3_2:-7074365 None:intergenic
TCTAAGTTCTCTTTGTGACA+TGG 0.558340 3_2:-7071242 None:intergenic
TGTTGTTCTTTGTTGTCGAG+TGG 0.559401 3_2:+7074314 Msa0393100:CDS
AAAGGTGGTGGTGATTCTGA+AGG 0.562096 3_2:+7071214 Msa0393100:CDS
CAAATGGCTGATGTTGGAGT+TGG 0.562565 3_2:+7074566 Msa0393100:CDS
GAGCTCCATCGAAAAGAAGC+AGG 0.563941 3_2:+7072013 Msa0393100:CDS
GTGAATACATACCAGTAGCC+AGG 0.565559 3_2:-7075679 None:intergenic
ATGATTCAAATGGCTGATGT+TGG 0.567389 3_2:+7074560 Msa0393100:CDS
ATTCAATGGGTTCTAGCAAG+AGG 0.567625 3_2:+7071122 Msa0393100:CDS
AGACTATAAGTACTATGGAT+GGG 0.568634 3_2:+7072200 Msa0393100:CDS
AAACTCAATCAAAGTTACGT+TGG 0.569503 3_2:+7076864 Msa0393100:three_prime_UTR
TAAACTTCAACAAGGTGTGC+CGG 0.569652 3_2:+7073876 Msa0393100:CDS
CTTGGTGTGGCGGTCTATTG+TGG 0.570097 3_2:+7071958 Msa0393100:CDS
CTTCGATCATGAAATAGGCC+TGG 0.570285 3_2:-7072320 None:intergenic
TTTCATTGTTAACTATCCGA+AGG 0.570789 3_2:+7076641 Msa0393100:three_prime_UTR
GTTGGTATAAGTGGACAAGA+GGG 0.570884 3_2:+7074584 Msa0393100:CDS
AACTTCATATGGATTCTAAG+AGG 0.571610 3_2:+7070909 None:intergenic
GTGGCTCCACTACAAAAGGC+TGG 0.572516 3_2:+7074333 Msa0393100:CDS
TACCAGTAGCCAGGAAGTTG+AGG 0.574838 3_2:-7075670 None:intergenic
AATATCAATGACTATGTGGC+CGG 0.577435 3_2:-7073240 None:intergenic
TTCGATAAGCATAAAACCAT+AGG 0.579031 3_2:-7073210 None:intergenic
GTTCATCAGGCGATTCACCT+TGG 0.579840 3_2:-7073163 None:intergenic
TGGAAACATTGCTTTCAACA+TGG 0.580153 3_2:-7073828 None:intergenic
TTTGTCTATTACACTAAACA+TGG 0.584696 3_2:-7073617 None:intergenic
AAAACAGGAGACAGGTTCAA+AGG 0.585363 3_2:+7071780 Msa0393100:CDS
CTTCCAAATACTGCAAGTTG+AGG 0.585542 3_2:-7071451 None:intergenic
TGATACTTTGTGGCAAAGCA+TGG 0.585733 3_2:+7075444 Msa0393100:CDS
GTGACTCATGCTGTCATTTG+GGG 0.586654 3_2:+7075601 Msa0393100:CDS
TTTCATTGAGAAGAAATGGA+AGG 0.588212 3_2:+7071609 Msa0393100:CDS
AGGTATGCAAAACAGGAGAC+AGG 0.590030 3_2:+7071772 Msa0393100:CDS
AATGGAGTTGAAAATGTGGA+AGG 0.590116 3_2:+7073041 Msa0393100:CDS
CGACAGTGAACATGAAGAAG+AGG 0.590828 3_2:+7074152 Msa0393100:CDS
TCCATCGAAAAGAAGCAGGC+TGG 0.591320 3_2:+7072017 Msa0393100:CDS
ATGACACTAGCCATCGGAGA+TGG 0.592031 3_2:+7074390 Msa0393100:CDS
AAATGGAAGGATATTCGGGT+TGG 0.592314 3_2:+7071622 Msa0393100:CDS
AACTTGACCGAACTCAACAC+CGG 0.593189 3_2:-7071044 None:intergenic
ACTATTGATATAGCAAGCAT+AGG 0.593453 3_2:+7075505 Msa0393100:CDS
TGTCCAGCACTATAAAGTTG+AGG 0.593916 3_2:-7075376 None:intergenic
ATGGTCACTGGAATTATCAA+AGG 0.595865 3_2:+7074678 Msa0393100:CDS
ATAGCTTTGATTATTGATGG+TGG 0.600389 3_2:+7074111 Msa0393100:CDS
CATAAAACCATAGGCAGCAG+CGG 0.605167 3_2:-7073201 None:intergenic
AGTTGGTATAAGTGGACAAG+AGG 0.609765 3_2:+7074583 Msa0393100:CDS
ACCGGCATGGAGAATGAACT+AGG 0.612046 3_2:+7072519 Msa0393100:CDS
ACATCCTCTAAGCACAATGT+TGG 0.612946 3_2:-7071911 None:intergenic
AGACCTTTGGACTCTTGCAG+TGG 0.613543 3_2:+7075528 Msa0393100:CDS
TGAATATTAATGAAGATTTG+GGG 0.616519 3_2:+7072394 Msa0393100:CDS
CAAGAGGAACAATTCTGTGA+GGG 0.617307 3_2:+7071138 Msa0393100:CDS
TTCCAATATGCAAAGAGTGG+AGG 0.618565 3_2:-7075478 None:intergenic
AGGTATGGTTCAAAAGGTGG+TGG 0.619167 3_2:+7071202 Msa0393100:CDS
CTAGGTGACTACTCAGTGCA+AGG 0.622746 3_2:+7072537 Msa0393100:CDS
ATGGCGAATATGGAAATCGA+TGG 0.624834 3_2:+7071865 Msa0393100:CDS
AGAACTCGTACCATCTCCGA+TGG 0.625531 3_2:-7074400 None:intergenic
GATGGTAAGAAGTTATCACT+TGG 0.629993 3_2:+7071883 Msa0393100:CDS
TTTCAATGTGCAAGCATACG+AGG 0.630431 3_2:+7072474 Msa0393100:CDS
ATGGCATGCAGCCTATGAAG+CGG 0.630585 3_2:+7073756 Msa0393100:CDS
GTATAAGTGGACAAGAGGGT+AGG 0.639872 3_2:+7074588 Msa0393100:CDS
AGATGATCGATTGTATGATG+AGG 0.640521 3_2:+7072341 Msa0393100:CDS
AAAGAAGCAGGCTGGAGACG+CGG 0.642983 3_2:+7072025 Msa0393100:CDS
TAAGCATAGCTTTAGTCTCG+CGG 0.643603 3_2:-7071981 None:intergenic
AATAGACAAATCACACAACA+TGG 0.644458 3_2:+7073630 Msa0393100:CDS
TAACCACTGCAAGAGTCCAA+AGG 0.646133 3_2:-7075531 None:intergenic
AAGGTGGTGGTGATTCTGAA+GGG 0.646912 3_2:+7071215 Msa0393100:CDS
CATGAATATCAATGACTATG+TGG 0.647298 3_2:-7073244 None:intergenic
AATCACGTCTGTTTGTGCTG+CGG 0.649507 3_2:+7072098 Msa0393100:CDS
TGACCATGTATCAATAAGAG+AGG 0.653984 3_2:-7074662 None:intergenic
AAGCAATAGGAATCATGACC+TGG 0.654082 3_2:-7072266 None:intergenic
ACAAACAGAACAAAAGCCAA+CGG 0.667705 3_2:-7071490 None:intergenic
GTGAGGTATGGTTCAAAAGG+TGG 0.669439 3_2:+7071199 Msa0393100:CDS
ACCAAAATAGGACAAGAACA+AGG 0.674548 3_2:-7074742 None:intergenic
AAGAAATGGAGTTGAAAATG+TGG 0.674807 3_2:+7073037 Msa0393100:CDS
TTAATCAAACCAGTATACCT+CGG 0.685339 3_2:-7071808 None:intergenic
TCTGACATGACACTAGCCAT+CGG 0.686147 3_2:+7074384 Msa0393100:CDS
AGATGTCCTCTTCTTCACAA+GGG 0.686778 3_2:-7074364 None:intergenic
GCAAGAGGAACAATTCTGTG+AGG 0.696594 3_2:+7071137 Msa0393100:CDS
TTGAGTCGCTGAGAGCAGCA+GGG 0.700401 3_2:+7073905 Msa0393100:CDS
ATCGAAGATAAACTTCAACA+AGG 0.708153 3_2:+7073868 Msa0393100:CDS
GATAACAAAACAATATCACA+AGG 0.711577 3_2:-7071679 None:intergenic
CTATGAAGCGGCAAGCACTG+CGG 0.713920 3_2:+7073768 Msa0393100:CDS
GTAGATTATTGAGTACAATG+TGG 0.715499 3_2:-7075284 None:intergenic
GTGAAGCTGTTAGATTACCA+AGG 0.730806 3_2:+7073146 Msa0393100:CDS
CAGGTTCAAAGGTTCAACCG+AGG 0.752179 3_2:+7071791 Msa0393100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTGAAATAAGATAA+AGG + chr3_2:7072653-7072672 Msa0393100:intron 10.0%
!! TATCAAAAAAAATTATTTGA+GGG - chr3_2:7076207-7076226 None:intergenic 10.0%
!! TTATCAAAAAAAATTATTTG+AGG - chr3_2:7076208-7076227 None:intergenic 10.0%
!! TTTGAATATTAATGAAGATT+TGG + chr3_2:7072392-7072411 Msa0393100:CDS 15.0%
!! TTGAATATTAATGAAGATTT+GGG + chr3_2:7072393-7072412 Msa0393100:CDS 15.0%
!! AGTTTAATGTAAATTGTAAA+TGG - chr3_2:7074219-7074238 None:intergenic 15.0%
!! CTAGTAAAAAATATATTGAA+AGG - chr3_2:7074454-7074473 None:intergenic 15.0%
!! ATTAAGATAGAAATAGAATA+GGG - chr3_2:7075713-7075732 None:intergenic 15.0%
!! AATTAAGATAGAAATAGAAT+AGG - chr3_2:7075714-7075733 None:intergenic 15.0%
!! AAAGTTTCATTTAAATACTA+CGG + chr3_2:7075860-7075879 Msa0393100:intron 15.0%
!! TTTCTTATAAATATTTCTCA+AGG - chr3_2:7075984-7076003 None:intergenic 15.0%
!! GTCATTAAAAATAAAAAATG+TGG - chr3_2:7076036-7076055 None:intergenic 15.0%
!! TATTTATTTATATGTTGACA+TGG - chr3_2:7076143-7076162 None:intergenic 15.0%
!!! TTTTAAATGCATATAAAGTA+TGG - chr3_2:7076240-7076259 None:intergenic 15.0%
!!! AATGAGAATTTTGAGTTTTT+CGG + chr3_2:7071310-7071329 Msa0393100:CDS 20.0%
!! AATCCATATATATTCCTATT+CGG - chr3_2:7071844-7071863 None:intergenic 20.0%
!! TAGGAATATATATGGATTTA+TGG + chr3_2:7071846-7071865 Msa0393100:CDS 20.0%
!! AAATCAAGTTTCCTATAATA+AGG - chr3_2:7072162-7072181 None:intergenic 20.0%
!! TGAATATTAATGAAGATTTG+GGG + chr3_2:7072394-7072413 Msa0393100:CDS 20.0%
!! ATTTGTCAACCAAATTTAAA+CGG + chr3_2:7072679-7072698 Msa0393100:intron 20.0%
!! TGATTTCATTATCATTATCA+TGG - chr3_2:7073421-7073440 None:intergenic 20.0%
!! ATTCATATGTTAAAATCTTG+AGG - chr3_2:7075178-7075197 None:intergenic 20.0%
!!! TATTTTGGTCAATTTACATT+TGG + chr3_2:7075552-7075571 Msa0393100:CDS 20.0%
!! CAAATATTATCTTATAGTTG+AGG - chr3_2:7076081-7076100 None:intergenic 20.0%
!! CTCAACTATAAGATAATATT+TGG + chr3_2:7076079-7076098 Msa0393100:intron 20.0%
!! AACTATAAGATAATATTTGG+TGG + chr3_2:7076082-7076101 Msa0393100:intron 20.0%
!! AAAAAATTATTTGAGGGAAA+AGG - chr3_2:7076201-7076220 None:intergenic 20.0%
!! ATTTACAACATAACAAACTA+TGG - chr3_2:7076722-7076741 None:intergenic 20.0%
!!! AAATTTTGTGACAAACAAAA+GGG - chr3_2:7076821-7076840 None:intergenic 20.0%
!!! TAAATTTTGTGACAAACAAA+AGG - chr3_2:7076822-7076841 None:intergenic 20.0%
! GTAGGAATATATTGATCATT+TGG - chr3_2:7070962-7070981 None:intergenic 25.0%
! TTCTATGTTCATTCATTCAA+TGG + chr3_2:7071108-7071127 Msa0393100:CDS 25.0%
! TCTATGTTCATTCATTCAAT+GGG + chr3_2:7071109-7071128 Msa0393100:CDS 25.0%
!!! AAATTCTCATTGGTTTTATC+AGG - chr3_2:7071301-7071320 None:intergenic 25.0%
! GAAAAACTCAAAATTCTCAT+TGG - chr3_2:7071311-7071330 None:intergenic 25.0%
! GATAACAAAACAATATCACA+AGG - chr3_2:7071682-7071701 None:intergenic 25.0%
! AAACCGAATAGGAATATATA+TGG + chr3_2:7071838-7071857 Msa0393100:CDS 25.0%
! ATAGAAATGTACAAAGCAAT+AGG - chr3_2:7072282-7072301 None:intergenic 25.0%
! TATTGCTTTGTACATTTCTA+TGG + chr3_2:7072281-7072300 Msa0393100:CDS 25.0%
! TACACTTACTGAAAATAAGA+TGG + chr3_2:7072449-7072468 Msa0393100:CDS 25.0%
!!! CTGTTTTAACCGTTTAAATT+TGG - chr3_2:7072691-7072710 None:intergenic 25.0%
! AATAGGTGGTTAATTACATT+TGG + chr3_2:7072715-7072734 Msa0393100:intron 25.0%
! AATTGCGATTATAGATAGAA+AGG - chr3_2:7073301-7073320 None:intergenic 25.0%
!! ATTGTAGCATTTGCATTTTT+AGG + chr3_2:7073318-7073337 Msa0393100:intron 25.0%
!! TTGTAGCATTTGCATTTTTA+GGG + chr3_2:7073319-7073338 Msa0393100:intron 25.0%
! ATAATGAAATCACCTTAATG+TGG + chr3_2:7073429-7073448 Msa0393100:intron 25.0%
! GAGAAAGATTCATTAAAATG+TGG - chr3_2:7073471-7073490 None:intergenic 25.0%
! TTTGTCTATTACACTAAACA+TGG - chr3_2:7073620-7073639 None:intergenic 25.0%
!!! GATGTTTTATTTGCTGATTT+TGG + chr3_2:7074246-7074265 Msa0393100:intron 25.0%
! TTGAATCATTGATACATCAT+TGG - chr3_2:7074549-7074568 None:intergenic 25.0%
! TGATGTATCAATGATTCAAA+TGG + chr3_2:7074550-7074569 Msa0393100:CDS 25.0%
! TGATATGATAAACCATTTGT+TGG - chr3_2:7074778-7074797 None:intergenic 25.0%
!!! ATCAGGGTTTTATAGATAAT+TGG + chr3_2:7074848-7074867 Msa0393100:intron 25.0%
!! TGCTCTGAATTATATATTGA+CGG - chr3_2:7074875-7074894 None:intergenic 25.0%
! AGAACATACCTAAAAAACAA+AGG - chr3_2:7075220-7075239 None:intergenic 25.0%
! AGAATTCCAACAATAATAGT+TGG - chr3_2:7075319-7075338 None:intergenic 25.0%
! TATAAAGTTGAGGATACTTT+AGG - chr3_2:7075369-7075388 None:intergenic 25.0%
!!! GAAACTGTTTTTGTTAACAA+TGG + chr3_2:7075420-7075439 Msa0393100:CDS 25.0%
!! ATAAGATAATATTTGGTGGT+TGG + chr3_2:7076086-7076105 Msa0393100:intron 25.0%
!! CAAATTTAAGATGCATAGAA+TGG - chr3_2:7076174-7076193 None:intergenic 25.0%
! AAAGCAATGTATAATTGCAA+AGG - chr3_2:7076263-7076282 None:intergenic 25.0%
!! ATATATTTTACAACCAAACG+TGG - chr3_2:7076413-7076432 None:intergenic 25.0%
! CTAGAAATTTGAATATCACT+AGG - chr3_2:7076452-7076471 None:intergenic 25.0%
! ATAGATTACTTCTCTTATCT+TGG - chr3_2:7076554-7076573 None:intergenic 25.0%
! TGTAAAGTTGCATATACTTT+AGG + chr3_2:7076588-7076607 Msa0393100:three_prime_UTR 25.0%
! AACAAAAAAACTCTATCCTT+CGG - chr3_2:7076660-7076679 None:intergenic 25.0%
!! ACCATTGATTATAGAATGAA+AGG + chr3_2:7076743-7076762 Msa0393100:three_prime_UTR 25.0%
! TCCTTTCATTCTATAATCAA+TGG - chr3_2:7076747-7076766 None:intergenic 25.0%
!! TATTGATCATTTGGTGTTCT+TGG - chr3_2:7070953-7070972 None:intergenic 30.0%
!! CTTGAACTTGACTTTGATTT+TGG - chr3_2:7071007-7071026 None:intergenic 30.0%
ATGAGTAGTTTAAACCATTC+AGG + chr3_2:7071163-7071182 Msa0393100:CDS 30.0%
AACTGTTCAAACAAATTCCT+TGG - chr3_2:7071379-7071398 None:intergenic 30.0%
CAGATAAAGTTGAGAATAAC+AGG + chr3_2:7071557-7071576 Msa0393100:CDS 30.0%
!! GCAACAATTTTGATGAATGA+TGG + chr3_2:7071583-7071602 Msa0393100:CDS 30.0%
GTAGTTTCATTGAGAAGAAA+TGG + chr3_2:7071605-7071624 Msa0393100:CDS 30.0%
TTTCATTGAGAAGAAATGGA+AGG + chr3_2:7071609-7071628 Msa0393100:CDS 30.0%
AGAAGAAATGGAAGGATATT+CGG + chr3_2:7071617-7071636 Msa0393100:CDS 30.0%
GTGCAAACTATTAATCTTGA+TGG + chr3_2:7071730-7071749 Msa0393100:CDS 30.0%
TTAATCAAACCAGTATACCT+CGG - chr3_2:7071811-7071830 None:intergenic 30.0%
ATATGGATTTATGGCGAATA+TGG + chr3_2:7071855-7071874 Msa0393100:CDS 30.0%
TGAGCTTAAGAATACTAGTT+GGG + chr3_2:7071933-7071952 Msa0393100:CDS 30.0%
AAAGCTATGCTTAACAATTC+AGG + chr3_2:7071991-7072010 Msa0393100:CDS 30.0%
! TGAATCTGTTGCCTTATTAT+AGG + chr3_2:7072148-7072167 Msa0393100:CDS 30.0%
!! GAAACTTGATTTTTCAAAGC+CGG + chr3_2:7072170-7072189 Msa0393100:CDS 30.0%
TACTTATAGTCTTCAACTTC+CGG - chr3_2:7072192-7072211 None:intergenic 30.0%
GTTGAAGACTATAAGTACTA+TGG + chr3_2:7072195-7072214 Msa0393100:CDS 30.0%
AAGACTATAAGTACTATGGA+TGG + chr3_2:7072199-7072218 Msa0393100:CDS 30.0%
AGACTATAAGTACTATGGAT+GGG + chr3_2:7072200-7072219 Msa0393100:CDS 30.0%
GGTAAACTATAACTGACATA+AGG - chr3_2:7072248-7072267 None:intergenic 30.0%
TATGTCAGTTATAGTTTACC+AGG + chr3_2:7072248-7072267 Msa0393100:CDS 30.0%
ATCATCTTCGATCATGAAAT+AGG - chr3_2:7072328-7072347 None:intergenic 30.0%
TATGTGTTCTCAGATAAAAC+TGG + chr3_2:7072426-7072445 Msa0393100:CDS 30.0%
AACAATACCAGATGCATTAA+AGG - chr3_2:7072634-7072653 None:intergenic 30.0%
ACGGTTAAAACAGTTCAAAT+AGG + chr3_2:7072698-7072717 Msa0393100:intron 30.0%
GTTAAAACAGTTCAAATAGG+TGG + chr3_2:7072701-7072720 Msa0393100:intron 30.0%
CGGTTAATGAGTATATAAGA+TGG - chr3_2:7072801-7072820 None:intergenic 30.0%
AGGTAATTACGTTCAGTATA+CGG - chr3_2:7072821-7072840 None:intergenic 30.0%
ATGAACCACTTAGATTATTG+TGG + chr3_2:7072856-7072875 Msa0393100:intron 30.0%
! TTTTGCCACAATAATCTAAG+TGG - chr3_2:7072864-7072883 None:intergenic 30.0%
! TATTTTCTACTCTCAGTTGA+TGG + chr3_2:7072957-7072976 Msa0393100:intron 30.0%
AAGAAATGGAGTTGAAAATG+TGG + chr3_2:7073037-7073056 Msa0393100:CDS 30.0%
TTGAAAATGTGGAAGGAAAA+AGG + chr3_2:7073048-7073067 Msa0393100:CDS 30.0%
TTCGATAAGCATAAAACCAT+AGG - chr3_2:7073213-7073232 None:intergenic 30.0%
CATGAATATCAATGACTATG+TGG - chr3_2:7073247-7073266 None:intergenic 30.0%
CACATAGTCATTGATATTCA+TGG + chr3_2:7073245-7073264 Msa0393100:CDS 30.0%
TTTCTCATTATGAACATTGC+AGG + chr3_2:7073485-7073504 Msa0393100:intron 30.0%
CAGTGATAGAAAAAGAATGT+CGG + chr3_2:7073537-7073556 Msa0393100:CDS 30.0%
! AAAAGAATGTCGGTTATACT+AGG + chr3_2:7073547-7073566 Msa0393100:CDS 30.0%
TCAGTAAAACTCTTTGTCAA+AGG + chr3_2:7073583-7073602 Msa0393100:CDS 30.0%
AATAGACAAATCACACAACA+TGG + chr3_2:7073630-7073649 Msa0393100:CDS 30.0%
AACAAGTGTTCTTAAACCTA+GGG - chr3_2:7073698-7073717 None:intergenic 30.0%
TAACAAGTGTTCTTAAACCT+AGG - chr3_2:7073699-7073718 None:intergenic 30.0%
!! GGTTTAAGAACACTTGTTAT+TGG + chr3_2:7073700-7073719 Msa0393100:CDS 30.0%
GAAAGCAATGTTTCCATATT+AGG + chr3_2:7073835-7073854 Msa0393100:CDS 30.0%
ATCGAAGATAAACTTCAACA+AGG + chr3_2:7073868-7073887 Msa0393100:CDS 30.0%
!! ATTAAAGTTTGGGTTTTGAC+TGG + chr3_2:7073928-7073947 Msa0393100:CDS 30.0%
CAAGAAACTGCTATATCTAT+TGG + chr3_2:7073958-7073977 Msa0393100:CDS 30.0%
!! CAGATAGCTTTGATTATTGA+TGG + chr3_2:7074108-7074127 Msa0393100:CDS 30.0%
!! ATAGCTTTGATTATTGATGG+TGG + chr3_2:7074111-7074130 Msa0393100:CDS 30.0%
! ATTTTGCAATGGGACAATTT+AGG + chr3_2:7074630-7074649 Msa0393100:CDS 30.0%
! GAGTACAATATCTGAAACTA+GGG - chr3_2:7075102-7075121 None:intergenic 30.0%
! TGAGTACAATATCTGAAACT+AGG - chr3_2:7075103-7075122 None:intergenic 30.0%
CAACAACTGCAATAAATGAA+TGG + chr3_2:7075257-7075276 Msa0393100:CDS 30.0%
GTAGATTATTGAGTACAATG+TGG - chr3_2:7075287-7075306 None:intergenic 30.0%
! CAAAAACAGTTTCTTGTTGT+AGG - chr3_2:7075413-7075432 None:intergenic 30.0%
! TAACAATGGTTGATACTTTG+TGG + chr3_2:7075434-7075453 Msa0393100:CDS 30.0%
ACTATTGATATAGCAAGCAT+AGG + chr3_2:7075505-7075524 Msa0393100:CDS 30.0%
TTCGAAGATATACACACAAT+TGG - chr3_2:7075788-7075807 None:intergenic 30.0%
TCAAGGTTAATCTTGTAATC+TGG - chr3_2:7075887-7075906 None:intergenic 30.0%
! CACTTAGAATAGGTTTTTCT+AGG - chr3_2:7076007-7076026 None:intergenic 30.0%
GTGGAAAAATCACTTAGAAT+AGG - chr3_2:7076017-7076036 None:intergenic 30.0%
TATTATCTTATAGTTGAGGC+TGG - chr3_2:7076077-7076096 None:intergenic 30.0%
CATATAAAGTATGGTAGCAA+AGG - chr3_2:7076231-7076250 None:intergenic 30.0%
AGTACTTGAAACATGAAAGA+AGG - chr3_2:7076342-7076361 None:intergenic 30.0%
! TTCTTTCATGTTTCAAGTAC+TGG + chr3_2:7076341-7076360 Msa0393100:CDS 30.0%
TATCAAAGAGTTGCTGAAAA+TGG + chr3_2:7076494-7076513 Msa0393100:CDS 30.0%
TTTCATTGTTAACTATCCGA+AGG + chr3_2:7076641-7076660 Msa0393100:three_prime_UTR 30.0%
CTTGGAGATTGTAACAAAAG+TGG - chr3_2:7070935-7070954 None:intergenic 35.0%
TCAGGAAAAACTGGTATTGT+AGG - chr3_2:7070980-7070999 None:intergenic 35.0%
! AGCAACACAGTAACATTTTC+CGG + chr3_2:7071025-7071044 Msa0393100:CDS 35.0%
!! CAGTACTTTTTGATCCTGAA+TGG - chr3_2:7071180-7071199 None:intergenic 35.0%
!! TCAAAAAGTACTGTGAGGTA+TGG + chr3_2:7071187-7071206 Msa0393100:CDS 35.0%
TCTAAGTTCTCTTTGTGACA+TGG - chr3_2:7071245-7071264 None:intergenic 35.0%
TAGAGATGAAGATGCAAGAT+TGG + chr3_2:7071261-7071280 Msa0393100:CDS 35.0%
CAATTCTCACTTTCATTCCA+AGG + chr3_2:7071359-7071378 Msa0393100:CDS 35.0%
ATATGTTTCGATTCTACCGT+TGG + chr3_2:7071474-7071493 Msa0393100:CDS 35.0%
ACAAACAGAACAAAAGCCAA+CGG - chr3_2:7071493-7071512 None:intergenic 35.0%
!! GCTTTTGTTCTGTTTGTTAC+TGG + chr3_2:7071496-7071515 Msa0393100:CDS 35.0%
!! TGAAAGATGCTTTTGAGGAT+TGG + chr3_2:7071521-7071540 Msa0393100:CDS 35.0%
GAAGAAATGGAAGGATATTC+GGG + chr3_2:7071618-7071637 Msa0393100:CDS 35.0%
TTATCAACTAGTGATCCAAC+TGG + chr3_2:7071697-7071716 Msa0393100:CDS 35.0%
GTGAGTCTAATTTGAAGACT+AGG + chr3_2:7071752-7071771 Msa0393100:CDS 35.0%
TTAAGTGTGAGAAACCGAAT+AGG + chr3_2:7071827-7071846 Msa0393100:CDS 35.0%
GATGGTAAGAAGTTATCACT+TGG + chr3_2:7071883-7071902 Msa0393100:CDS 35.0%
GTGAGCTTAAGAATACTAGT+TGG + chr3_2:7071932-7071951 Msa0393100:CDS 35.0%
GACTATAAGTACTATGGATG+GGG + chr3_2:7072201-7072220 Msa0393100:CDS 35.0%
AGATGATCGATTGTATGATG+AGG + chr3_2:7072341-7072360 Msa0393100:CDS 35.0%
TCTGCACTGAAACTTTGTAT+TGG - chr3_2:7072370-7072389 None:intergenic 35.0%
GATTACAGTTCCACAAAAAC+CGG + chr3_2:7072501-7072520 Msa0393100:CDS 35.0%
AACATTGCCTTTAATGCATC+TGG + chr3_2:7072624-7072643 Msa0393100:intron 35.0%
AGGTGGTTAATTACATTTGG+TGG + chr3_2:7072718-7072737 Msa0393100:intron 35.0%
TTCATGCAGCTTAAATAGGT+AGG - chr3_2:7072841-7072860 None:intergenic 35.0%
GATCTTAAAGCCAAAGATGA+AGG + chr3_2:7072983-7073002 Msa0393100:CDS 35.0%
CTAACTTTCACCTTCATCTT+TGG - chr3_2:7072996-7073015 None:intergenic 35.0%
! CTTTTGCAATTGGCAAGAAA+TGG + chr3_2:7073023-7073042 Msa0393100:CDS 35.0%
AATGGAGTTGAAAATGTGGA+AGG + chr3_2:7073041-7073060 Msa0393100:CDS 35.0%
AATAGGCACAATAGTATTGC+AGG - chr3_2:7073102-7073121 None:intergenic 35.0%
TAATCTAACAGCTTCACATC+AGG - chr3_2:7073143-7073162 None:intergenic 35.0%
AATATCAATGACTATGTGGC+CGG - chr3_2:7073243-7073262 None:intergenic 35.0%
TCATTGTTTGCACCACATTA+AGG - chr3_2:7073444-7073463 None:intergenic 35.0%
! AGAGTTTTACTGAACTGTCA+GGG - chr3_2:7073576-7073595 None:intergenic 35.0%
! AAGAGTTTTACTGAACTGTC+AGG - chr3_2:7073577-7073596 None:intergenic 35.0%
TGGAAACATTGCTTTCAACA+TGG - chr3_2:7073831-7073850 None:intergenic 35.0%
GTATCCTTGTGTTACATTAC+AGG + chr3_2:7074521-7074540 Msa0393100:intron 35.0%
ATGATTCAAATGGCTGATGT+TGG + chr3_2:7074560-7074579 Msa0393100:CDS 35.0%
! AATGGCATCAGATTTTGCAA+TGG + chr3_2:7074619-7074638 Msa0393100:CDS 35.0%
! ATGGCATCAGATTTTGCAAT+GGG + chr3_2:7074620-7074639 Msa0393100:CDS 35.0%
GTTCCTCTCTTATTGATACA+TGG + chr3_2:7074659-7074678 Msa0393100:CDS 35.0%
TGACCATGTATCAATAAGAG+AGG - chr3_2:7074665-7074684 None:intergenic 35.0%
TCTTATTGATACATGGTCAC+TGG + chr3_2:7074666-7074685 Msa0393100:CDS 35.0%
ATGGTCACTGGAATTATCAA+AGG + chr3_2:7074678-7074697 Msa0393100:CDS 35.0%
! TCCTTGTTCTTGTCCTATTT+TGG + chr3_2:7074741-7074760 Msa0393100:CDS 35.0%
ACCAAAATAGGACAAGAACA+AGG - chr3_2:7074745-7074764 None:intergenic 35.0%
GGATTGTGACTTACCAAAAT+AGG - chr3_2:7074757-7074776 None:intergenic 35.0%
GTAAGTCACAATCCAACAAA+TGG + chr3_2:7074763-7074782 Msa0393100:intron 35.0%
TTGATGTTTGTGTCAGTATC+AGG + chr3_2:7074831-7074850 Msa0393100:intron 35.0%
TGATGTTTGTGTCAGTATCA+GGG + chr3_2:7074832-7074851 Msa0393100:intron 35.0%
! AACTAGGGTTTAGTCTCTTT+TGG - chr3_2:7075087-7075106 None:intergenic 35.0%
!!! GTTCTGTGCCTTTGTTTTTT+AGG + chr3_2:7075209-7075228 Msa0393100:intron 35.0%
TATTGCAGTTGTTGAAGTGA+AGG - chr3_2:7075251-7075270 None:intergenic 35.0%
GCACTACCAACTATTATTGT+TGG + chr3_2:7075310-7075329 Msa0393100:CDS 35.0%
TATCCTCAACTTTATAGTGC+TGG + chr3_2:7075373-7075392 Msa0393100:CDS 35.0%
! CTTTTCCAATATGCAAAGAG+TGG - chr3_2:7075484-7075503 None:intergenic 35.0%
GGTCAATTTACATTTGGCTA+TGG + chr3_2:7075558-7075577 Msa0393100:CDS 35.0%
TGGATGTTGTTAGATGGTAT+TGG + chr3_2:7075578-7075597 Msa0393100:CDS 35.0%
GGATGTTGTTAGATGGTATT+GGG + chr3_2:7075579-7075598 Msa0393100:CDS 35.0%
TTTCCTAACTTTGACATTGC+AGG + chr3_2:7076315-7076334 Msa0393100:intron 35.0%
TTCCTAACTTTGACATTGCA+GGG + chr3_2:7076316-7076335 Msa0393100:intron 35.0%
!! CTTGGTTGATGATATGAGAT+AGG - chr3_2:7076536-7076555 None:intergenic 35.0%
CAGAGAATTTCTCTATGTTG+CGG + chr3_2:7076617-7076636 Msa0393100:three_prime_UTR 35.0%
! TTTGGTAGCTCAGGAAAAAC+TGG - chr3_2:7070989-7071008 None:intergenic 40.0%
!! GACTTTGATTTTGGTAGCTC+AGG - chr3_2:7070998-7071017 None:intergenic 40.0%
!! ACATTTTCCGGTGTTGAGTT+CGG + chr3_2:7071037-7071056 Msa0393100:CDS 40.0%
! ATTCAATGGGTTCTAGCAAG+AGG + chr3_2:7071122-7071141 Msa0393100:CDS 40.0%
CAAGAGGAACAATTCTGTGA+GGG + chr3_2:7071138-7071157 Msa0393100:CDS 40.0%
!! CAGGATCAAAAAGTACTGTG+AGG + chr3_2:7071182-7071201 Msa0393100:CDS 40.0%
ACTGTGAGGTATGGTTCAAA+AGG + chr3_2:7071196-7071215 Msa0393100:CDS 40.0%
CTTCCTCAACTTGCAGTATT+TGG + chr3_2:7071448-7071467 Msa0393100:CDS 40.0%
CTTCCAAATACTGCAAGTTG+AGG - chr3_2:7071454-7071473 None:intergenic 40.0%
! TGGTGTGAAAGATGCTTTTG+AGG + chr3_2:7071516-7071535 Msa0393100:CDS 40.0%
!! AAGATGCTTTTGAGGATTGG+AGG + chr3_2:7071524-7071543 Msa0393100:CDS 40.0%
AAATGGAAGGATATTCGGGT+TGG + chr3_2:7071622-7071641 Msa0393100:CDS 40.0%
GAAGACTAGGTATGCAAAAC+AGG + chr3_2:7071765-7071784 Msa0393100:CDS 40.0%
AAAACAGGAGACAGGTTCAA+AGG + chr3_2:7071780-7071799 Msa0393100:CDS 40.0%
ATGGCGAATATGGAAATCGA+TGG + chr3_2:7071865-7071884 Msa0393100:CDS 40.0%
TCAACCAACATTGTGCTTAG+AGG + chr3_2:7071907-7071926 Msa0393100:CDS 40.0%
ACATCCTCTAAGCACAATGT+TGG - chr3_2:7071914-7071933 None:intergenic 40.0%
!! TAAGCATAGCTTTAGTCTCG+CGG - chr3_2:7071984-7072003 None:intergenic 40.0%
ACAGATTCAACTCGTCCTTA+TGG - chr3_2:7072137-7072156 None:intergenic 40.0%
TAAGTACTATGGATGGGGAT+TGG + chr3_2:7072206-7072225 Msa0393100:CDS 40.0%
AAGCAATAGGAATCATGACC+TGG - chr3_2:7072269-7072288 None:intergenic 40.0%
TTTCAATGTGCAAGCATACG+AGG + chr3_2:7072474-7072493 Msa0393100:CDS 40.0%
GTGGTTCATGCAGCTTAAAT+AGG - chr3_2:7072845-7072864 None:intergenic 40.0%
! TAGTCCAGAGCTTTTGCAAT+TGG + chr3_2:7073013-7073032 Msa0393100:CDS 40.0%
TAACAGCTTCACATCAGGAT+CGG - chr3_2:7073138-7073157 None:intergenic 40.0%
GTGAAGCTGTTAGATTACCA+AGG + chr3_2:7073146-7073165 Msa0393100:CDS 40.0%
TATGCCAATGCTTGTTCATC+AGG - chr3_2:7073179-7073198 None:intergenic 40.0%
ATGCTTATCGAACGAACTTC+CGG + chr3_2:7073221-7073240 Msa0393100:CDS 40.0%
ACATTGCAGGTTCAATGTGT+TGG + chr3_2:7073498-7073517 Msa0393100:intron 40.0%
CATTGCAGGTTCAATGTGTT+GGG + chr3_2:7073499-7073518 Msa0393100:intron 40.0%
GCACTTCAGAGTTTGAAGAA+TGG + chr3_2:7073737-7073756 Msa0393100:CDS 40.0%
GATAGCAGATGCTCCTAATA+TGG - chr3_2:7073851-7073870 None:intergenic 40.0%
TAAACTTCAACAAGGTGTGC+CGG + chr3_2:7073876-7073895 Msa0393100:CDS 40.0%
AGCAGCAGGGATTAAAGTTT+GGG + chr3_2:7073918-7073937 Msa0393100:CDS 40.0%
GTCTCAAAGATGCTCTTGAA+AGG + chr3_2:7074058-7074077 Msa0393100:CDS 40.0%
! TGTTGTTCTTTGTTGTCGAG+TGG + chr3_2:7074314-7074333 Msa0393100:CDS 40.0%
! ACAATACCAGCCTTTTGTAG+TGG - chr3_2:7074342-7074361 None:intergenic 40.0%
TTGTTTCCCTTGTGAAGAAG+AGG + chr3_2:7074358-7074377 Msa0393100:CDS 40.0%
AGATGTCCTCTTCTTCACAA+GGG - chr3_2:7074367-7074386 None:intergenic 40.0%
!! GATGTTGGAGTTGGTATAAG+TGG + chr3_2:7074575-7074594 Msa0393100:CDS 40.0%
! AGTTGGTATAAGTGGACAAG+AGG + chr3_2:7074583-7074602 Msa0393100:CDS 40.0%
GTTGGTATAAGTGGACAAGA+GGG + chr3_2:7074584-7074603 Msa0393100:CDS 40.0%
CACTGGAATTATCAAAGGCT+TGG + chr3_2:7074683-7074702 Msa0393100:CDS 40.0%
TGTCCAGCACTATAAAGTTG+AGG - chr3_2:7075379-7075398 None:intergenic 40.0%
TGATACTTTGTGGCAAAGCA+TGG + chr3_2:7075444-7075463 Msa0393100:CDS 40.0%
! GGCAAAGCATGGTTGTATTT+TGG + chr3_2:7075455-7075474 Msa0393100:CDS 40.0%
TTCCAATATGCAAAGAGTGG+AGG - chr3_2:7075481-7075500 None:intergenic 40.0%
! GACTCTTGCAGTGGTTATTT+TGG + chr3_2:7075537-7075556 Msa0393100:CDS 40.0%
TGGCTATGGATGTTGTTAGA+TGG + chr3_2:7075572-7075591 Msa0393100:CDS 40.0%
! TATAGTTGAGGCTGGTTACA+TGG - chr3_2:7076069-7076088 None:intergenic 40.0%
!! TTTCAAGTACTGGACTGTTC+TGG + chr3_2:7076351-7076370 Msa0393100:CDS 40.0%
!! TTCAAGTACTGGACTGTTCT+GGG + chr3_2:7076352-7076371 Msa0393100:CDS 40.0%
AACTTGACCGAACTCAACAC+CGG - chr3_2:7071047-7071066 None:intergenic 45.0%
GCAAGAGGAACAATTCTGTG+AGG + chr3_2:7071137-7071156 Msa0393100:CDS 45.0%
GTGAGGTATGGTTCAAAAGG+TGG + chr3_2:7071199-7071218 Msa0393100:CDS 45.0%
AGGTATGGTTCAAAAGGTGG+TGG + chr3_2:7071202-7071221 Msa0393100:CDS 45.0%
! AAAGGTGGTGGTGATTCTGA+AGG + chr3_2:7071214-7071233 Msa0393100:CDS 45.0%
! AAGGTGGTGGTGATTCTGAA+GGG + chr3_2:7071215-7071234 Msa0393100:CDS 45.0%
TGCACATATGCAACACCAGT+TGG - chr3_2:7071715-7071734 None:intergenic 45.0%
AGGTATGCAAAACAGGAGAC+AGG + chr3_2:7071772-7071791 Msa0393100:CDS 45.0%
AAGGTTCAACCGAGGTATAC+TGG + chr3_2:7071799-7071818 Msa0393100:CDS 45.0%
AAGAATACTAGTTGGGCGCT+TGG + chr3_2:7071940-7071959 Msa0393100:CDS 45.0%
AATCACGTCTGTTTGTGCTG+CGG + chr3_2:7072098-7072117 Msa0393100:CDS 45.0%
! TCTATGGAGCTTGTTCGTGT+TGG + chr3_2:7072297-7072316 Msa0393100:CDS 45.0%
CTTCGATCATGAAATAGGCC+TGG - chr3_2:7072323-7072342 None:intergenic 45.0%
!!! ATTCTCCATGCCGGTTTTTG+TGG - chr3_2:7072514-7072533 None:intergenic 45.0%
ACCTAGTTCATTCTCCATGC+CGG - chr3_2:7072523-7072542 None:intergenic 45.0%
CTTGCCAATTGCAAAAGCTC+TGG - chr3_2:7073020-7073039 None:intergenic 45.0%
AACAGCTTCACATCAGGATC+GGG - chr3_2:7073137-7073156 None:intergenic 45.0%
ATCGCCTGATGAACAAGCAT+TGG + chr3_2:7073172-7073191 Msa0393100:CDS 45.0%
CATAAAACCATAGGCAGCAG+CGG - chr3_2:7073204-7073223 None:intergenic 45.0%
AATGTGTAACGCGAGTGTCT+AGG + chr3_2:7073380-7073399 Msa0393100:intron 45.0%
ATGTGTAACGCGAGTGTCTA+GGG + chr3_2:7073381-7073400 Msa0393100:intron 45.0%
CTTCACTCTTACTCTTCCCT+AGG + chr3_2:7073679-7073698 Msa0393100:CDS 45.0%
GAGCAGCAGGGATTAAAGTT+TGG + chr3_2:7073917-7073936 Msa0393100:CDS 45.0%
CACTGTCGAGTATGTGTACA+AGG - chr3_2:7074140-7074159 None:intergenic 45.0%
CGACAGTGAACATGAAGAAG+AGG + chr3_2:7074152-7074171 Msa0393100:CDS 45.0%
CAGATGTCCTCTTCTTCACA+AGG - chr3_2:7074368-7074387 None:intergenic 45.0%
TCTGACATGACACTAGCCAT+CGG + chr3_2:7074384-7074403 Msa0393100:CDS 45.0%
GGCACCTGTAATGTAACACA+AGG - chr3_2:7074528-7074547 None:intergenic 45.0%
CAAATGGCTGATGTTGGAGT+TGG + chr3_2:7074566-7074585 Msa0393100:CDS 45.0%
GTATAAGTGGACAAGAGGGT+AGG + chr3_2:7074588-7074607 Msa0393100:CDS 45.0%
! ATGCTTCTAGAAGCCTTCTG+TGG - chr3_2:7074953-7074972 None:intergenic 45.0%
! GGGTATCTTTAGCCTTTCGT+GGG - chr3_2:7075039-7075058 None:intergenic 45.0%
TGCCTTGAGAATGACCTCAA+GGG - chr3_2:7075061-7075080 None:intergenic 45.0%
ATGCCTTGAGAATGACCTCA+AGG - chr3_2:7075062-7075081 None:intergenic 45.0%
TAGCAAGCATAGGAGACCTT+TGG + chr3_2:7075515-7075534 Msa0393100:CDS 45.0%
TAACCACTGCAAGAGTCCAA+AGG - chr3_2:7075534-7075553 None:intergenic 45.0%
! GGTGACTCATGCTGTCATTT+GGG + chr3_2:7075600-7075619 Msa0393100:CDS 45.0%
! GTGACTCATGCTGTCATTTG+GGG + chr3_2:7075601-7075620 Msa0393100:CDS 45.0%
GATGCTATACCTCAACTTCC+TGG + chr3_2:7075661-7075680 Msa0393100:CDS 45.0%
GTGAATACATACCAGTAGCC+AGG - chr3_2:7075682-7075701 None:intergenic 45.0%
CAGGTTCAAAGGTTCAACCG+AGG + chr3_2:7071791-7071810 Msa0393100:CDS 50.0%
GAGCTCCATCGAAAAGAAGC+AGG + chr3_2:7072013-7072032 Msa0393100:CDS 50.0%
TCCATCGAAAAGAAGCAGGC+TGG + chr3_2:7072017-7072036 Msa0393100:CDS 50.0%
! TCCAGCCTGCTTCTTTTCGA+TGG - chr3_2:7072021-7072040 None:intergenic 50.0%
! GGTTTGGTTGAAGCGCCATA+AGG + chr3_2:7072119-7072138 Msa0393100:CDS 50.0%
CAGTTCCACAAAAACCGGCA+TGG + chr3_2:7072506-7072525 Msa0393100:CDS 50.0%
ACCGGCATGGAGAATGAACT+AGG + chr3_2:7072519-7072538 Msa0393100:CDS 50.0%
CTAGGTGACTACTCAGTGCA+AGG + chr3_2:7072537-7072556 Msa0393100:CDS 50.0%
GTTCATCAGGCGATTCACCT+TGG - chr3_2:7073166-7073185 None:intergenic 50.0%
ATGGCATGCAGCCTATGAAG+CGG + chr3_2:7073756-7073775 Msa0393100:CDS 50.0%
! CAAGCACTGCGGTATTTGGT+CGG + chr3_2:7073779-7073798 Msa0393100:CDS 50.0%
! AAGCACTGCGGTATTTGGTC+GGG + chr3_2:7073780-7073799 Msa0393100:CDS 50.0%
CTCAGCGACTCAATTGCTTC+CGG - chr3_2:7073898-7073917 None:intergenic 50.0%
TCGAGTGGCTCCACTACAAA+AGG + chr3_2:7074329-7074348 Msa0393100:CDS 50.0%
ATGACACTAGCCATCGGAGA+TGG + chr3_2:7074390-7074409 Msa0393100:CDS 50.0%
AGAACTCGTACCATCTCCGA+TGG - chr3_2:7074403-7074422 None:intergenic 50.0%
AGAGGGTAGGCAAGCTGTAA+TGG + chr3_2:7074601-7074620 Msa0393100:CDS 50.0%
! CTTCTAGAAGCCTTCTGTGG+TGG - chr3_2:7074950-7074969 None:intergenic 50.0%
! GACTTAGCGCTCAAGTTGCT+TGG + chr3_2:7074990-7075009 Msa0393100:intron 50.0%
! TTAGCGCTCAAGTTGCTTGG+TGG + chr3_2:7074993-7075012 Msa0393100:intron 50.0%
! GTTGCTTGGTGGCTAAGTCA+CGG + chr3_2:7075004-7075023 Msa0393100:intron 50.0%
CGGAAAAACAAGCCCACGAA+AGG + chr3_2:7075024-7075043 Msa0393100:intron 50.0%
! GGGGTATCTTTAGCCTTTCG+TGG - chr3_2:7075040-7075059 None:intergenic 50.0%
AGGCTAAAGATACCCCCTTG+AGG + chr3_2:7075044-7075063 Msa0393100:intron 50.0%
CCTTGAGAATGACCTCAAGG+GGG - chr3_2:7075059-7075078 None:intergenic 50.0%
GCCTTGAGAATGACCTCAAG+GGG - chr3_2:7075060-7075079 None:intergenic 50.0%
GGCCTCCACTCTTTGCATAT+TGG + chr3_2:7075476-7075495 Msa0393100:CDS 50.0%
AGACCTTTGGACTCTTGCAG+TGG + chr3_2:7075528-7075547 Msa0393100:CDS 50.0%
GGGTGACTCATGCTGTCATT+TGG + chr3_2:7075599-7075618 Msa0393100:CDS 50.0%
TACCTCAACTTCCTGGCTAC+TGG + chr3_2:7075668-7075687 Msa0393100:CDS 50.0%
TACCAGTAGCCAGGAAGTTG+AGG - chr3_2:7075673-7075692 None:intergenic 50.0%
GGCCCTGCAATGTCAAAGTT+AGG - chr3_2:7076321-7076340 None:intergenic 50.0%
! CTGTTCTGGGCATTGTTGCT+AGG + chr3_2:7076365-7076384 Msa0393100:CDS 50.0%
CACAGCATTGCTTCCACGTT+TGG + chr3_2:7076397-7076416 Msa0393100:CDS 50.0%
! TACTAGTTGGGCGCTTGGTG+TGG + chr3_2:7071945-7071964 Msa0393100:CDS 55.0%
! CTTGGTGTGGCGGTCTATTG+TGG + chr3_2:7071958-7071977 Msa0393100:CDS 55.0%
AAAGAAGCAGGCTGGAGACG+CGG + chr3_2:7072025-7072044 Msa0393100:CDS 55.0%
CGTCTGTTTGTGCTGCGGTT+TGG + chr3_2:7072103-7072122 Msa0393100:CDS 55.0%
! TCGGGCGTGTCGACAACAAT+AGG - chr3_2:7073119-7073138 None:intergenic 55.0%
! CTATGAAGCGGCAAGCACTG+CGG + chr3_2:7073768-7073787 Msa0393100:CDS 55.0%
ATTGAGTCGCTGAGAGCAGC+AGG + chr3_2:7073904-7073923 Msa0393100:CDS 55.0%
TTGAGTCGCTGAGAGCAGCA+GGG + chr3_2:7073905-7073924 Msa0393100:CDS 55.0%
GTGGCTCCACTACAAAAGGC+TGG + chr3_2:7074333-7074352 Msa0393100:CDS 55.0%
CCCCCTTGAGGTCATTCTCA+AGG + chr3_2:7075056-7075075 Msa0393100:intron 55.0%
!! TAGTTGGGCGCTTGGTGTGG+CGG + chr3_2:7071948-7071967 Msa0393100:CDS 60.0%
! GGAGCTTGTTCGTGTTGGCC+AGG + chr3_2:7072302-7072321 Msa0393100:CDS 60.0%
GCATATGCCGCTGCTGCCTA+TGG + chr3_2:7073194-7073213 Msa0393100:CDS 60.0%
! CGCAGTGCTTGCCGCTTCAT+AGG - chr3_2:7073770-7073789 None:intergenic 60.0%
! GCGGCAAGCACTGCGGTATT+TGG + chr3_2:7073775-7073794 Msa0393100:CDS 60.0%
GCTGTTTGCGCCCTTCTGGA+GGG - chr3_2:7074903-7074922 None:intergenic 60.0%
! AGAAGGGCGCAAACAGCCCT+GGG + chr3_2:7074906-7074925 Msa0393100:intron 60.0%
! TCTGTGGTGGTGCCCTTTGG+AGG - chr3_2:7074937-7074956 None:intergenic 60.0%
! CCTTCTGTGGTGGTGCCCTT+TGG - chr3_2:7074940-7074959 None:intergenic 60.0%
!! CCAAAGGGCACCACCACAGA+AGG + chr3_2:7074937-7074956 Msa0393100:intron 60.0%
AGAGCACACCGCCCTCCAGA+AGG + chr3_2:7074889-7074908 Msa0393100:intron 65.0%
GAGCACACCGCCCTCCAGAA+GGG + chr3_2:7074890-7074909 Msa0393100:intron 65.0%
! GTTTGCGCCCTTCTGGAGGG+CGG - chr3_2:7074900-7074919 None:intergenic 65.0%
GGCTGTTTGCGCCCTTCTGG+AGG - chr3_2:7074904-7074923 None:intergenic 65.0%
CAGGGCTGTTTGCGCCCTTC+TGG - chr3_2:7074907-7074926 None:intergenic 65.0%
! CAGAAGGGCGCAAACAGCCC+TGG + chr3_2:7074905-7074924 Msa0393100:intron 65.0%
! CCCTTTGGAGGACGCGCCCA+GGG - chr3_2:7074925-7074944 None:intergenic 70.0%
CCCTGGGCGCGTCCTCCAAA+GGG + chr3_2:7074922-7074941 Msa0393100:intron 70.0%
GCCCTGGGCGCGTCCTCCAA+AGG + chr3_2:7074921-7074940 Msa0393100:intron 75.0%
! GCCCTTTGGAGGACGCGCCC+AGG - chr3_2:7074926-7074945 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 7070917 7076884 7070917 ID=Msa0393100;Name=Msa0393100
chr3_2 mRNA 7070917 7076884 7070917 ID=Msa0393100-mRNA-1;Parent=Msa0393100;Name=Msa0393100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.85|1|1|1|7|325|1213
chr3_2 exon 7070917 7072558 7070917 ID=Msa0393100-mRNA-1:exon:1731;Parent=Msa0393100-mRNA-1
chr3_2 exon 7072973 7073279 7072973 ID=Msa0393100-mRNA-1:exon:1732;Parent=Msa0393100-mRNA-1
chr3_2 exon 7073507 7074173 7073507 ID=Msa0393100-mRNA-1:exon:1733;Parent=Msa0393100-mRNA-1
chr3_2 exon 7074288 7074411 7074288 ID=Msa0393100-mRNA-1:exon:1734;Parent=Msa0393100-mRNA-1
chr3_2 exon 7074543 7074762 7074543 ID=Msa0393100-mRNA-1:exon:1735;Parent=Msa0393100-mRNA-1
chr3_2 exon 7075231 7075689 7075231 ID=Msa0393100-mRNA-1:exon:1736;Parent=Msa0393100-mRNA-1
chr3_2 exon 7076337 7076884 7076337 ID=Msa0393100-mRNA-1:exon:1737;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7070917 7072558 7070917 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7072973 7073279 7072973 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7073507 7074173 7073507 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7074288 7074411 7074288 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7074543 7074762 7074543 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7075231 7075689 7075231 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 CDS 7076337 7076559 7076337 ID=Msa0393100-mRNA-1:cds;Parent=Msa0393100-mRNA-1
chr3_2 three_prime_UTR 7076560 7076884 7076560 ID=Msa0393100-mRNA-1:three_prime_utr;Parent=Msa0393100-mRNA-1
Gene Sequence

>Msa0393100

ATGGATTCTAAGAGGCCACTTTTGTTACAATCTCCAAGAACACCAAATGATCAATATATTCCTACAATACCAGTTTTTCCTGAGCTACCAAAATCAAAGTCAAGTTCAAGCAACACAGTAACATTTTCCGGTGTTGAGTTCGGTCAAGTTGAGAATAAAAACTCTTCTAACTCATCATCATCAAGCAAAAGTTCTATGTTCATTCATTCAATGGGTTCTAGCAAGAGGAACAATTCTGTGAGGGAAATGAGTAGTTTAAACCATTCAGGATCAAAAAGTACTGTGAGGTATGGTTCAAAAGGTGGTGGTGATTCTGAAGGGTTAACCATGTCACAAAGAGAACTTAGAGATGAAGATGCAAGATTGGTATATATCAATGATCCTGATAAAACCAATGAGAATTTTGAGTTTTTCGGAAATTCAATCAGAACTGCTAAATACTCAATTCTCACTTTCATTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATATATTTTCTTATCATTGCTATTCTCAATCAGCTTCCTCAACTTGCAGTATTTGGAAGATATGTTTCGATTCTACCGTTGGCTTTTGTTCTGTTTGTTACTGGTGTGAAAGATGCTTTTGAGGATTGGAGGAGACACAATTCAGATAAAGTTGAGAATAACAGGTTAGCAACAATTTTGATGAATGATGGTAGTTTCATTGAGAAGAAATGGAAGGATATTCGGGTTGGTGAGATTGTAAAAATCAAAACAAATGAAACAATTCCTTGTGATATTGTTTTGTTATCAACTAGTGATCCAACTGGTGTTGCATATGTGCAAACTATTAATCTTGATGGTGAGTCTAATTTGAAGACTAGGTATGCAAAACAGGAGACAGGTTCAAAGGTTCAACCGAGGTATACTGGTTTGATTAAGTGTGAGAAACCGAATAGGAATATATATGGATTTATGGCGAATATGGAAATCGATGGTAAGAAGTTATCACTTGGATCAACCAACATTGTGCTTAGAGGATGTGAGCTTAAGAATACTAGTTGGGCGCTTGGTGTGGCGGTCTATTGTGGCCGCGAGACTAAAGCTATGCTTAACAATTCAGGAGCTCCATCGAAAAGAAGCAGGCTGGAGACGCGGATGAATTACGAAATCATTATGCTGTCTTTCTTTCTTGTTGCATTGTGTACAATCACGTCTGTTTGTGCTGCGGTTTGGTTGAAGCGCCATAAGGACGAGTTGAATCTGTTGCCTTATTATAGGAAACTTGATTTTTCAAAGCCGGAAGTTGAAGACTATAAGTACTATGGATGGGGATTGGAAATCTTTTTCACATTCCTTATGTCAGTTATAGTTTACCAGGTCATGATTCCTATTGCTTTGTACATTTCTATGGAGCTTGTTCGTGTTGGCCAGGCCTATTTCATGATCGAAGATGATCGATTGTATGATGAGGCTACCAATACAAAGTTTCAGTGCAGAGCTTTGAATATTAATGAAGATTTGGGGCAAATTAAGTATGTGTTCTCAGATAAAACTGGTACACTTACTGAAAATAAGATGGAGTTTCAATGTGCAAGCATACGAGGAGTCGATTACAGTTCCACAAAAACCGGCATGGAGAATGAACTAGGTGACTACTCAGTGCAAGTTGATGGAAAGATCTTAAAGCCAAAGATGAAGGTGAAAGTTAGTCCAGAGCTTTTGCAATTGGCAAGAAATGGAGTTGAAAATGTGGAAGGAAAAAGGATTTATGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTATTGTTGTCGACACGCCCGATCCTGATGTGAAGCTGTTAGATTACCAAGGTGAATCGCCTGATGAACAAGCATTGGCATATGCCGCTGCTGCCTATGGTTTTATGCTTATCGAACGAACTTCCGGCCACATAGTCATTGATATTCATGGACAAAGACTCAAGTTCAATGTGTTGGGTTTACATGAATTTGACAGTGATAGAAAAAGAATGTCGGTTATACTAGGCTACCCTGACAGTTCAGTAAAACTCTTTGTCAAAGGAGCAGACACAACCATGTTTAGTGTAATAGACAAATCACACAACATGGACGTAATAAAAGCTACAGAAACTCATCTTCACTCTTACTCTTCCCTAGGTTTAAGAACACTTGTTATTGGAATGAAAGAACTAAGCACTTCAGAGTTTGAAGAATGGCATGCAGCCTATGAAGCGGCAAGCACTGCGGTATTTGGTCGGGCTGCAATGCTTAAAAAAATTTCAAACCATGTTGAAAGCAATGTTTCCATATTAGGAGCATCTGCTATCGAAGATAAACTTCAACAAGGTGTGCCGGAAGCAATTGAGTCGCTGAGAGCAGCAGGGATTAAAGTTTGGGTTTTGACTGGTGACAAGCAAGAAACTGCTATATCTATTGGATTCTCATCAAAACTTTTGACAAGAAACATGACTCAAATTATTATTAACAGTAATAGTAAAGTGTCATGTAGAAAAAGTCTCAAAGATGCTCTTGAAAGGTCTAGAAAACTTGATGCAGTTGCAACACAGATAGCTTTGATTATTGATGGTGGAAGCCTTGTACACATACTCGACAGTGAACATGAAGAAGAGTTGTTTCAACTTGCAAGTTTGTGTTCTGTTGTTCTTTGTTGTCGAGTGGCTCCACTACAAAAGGCTGGTATTGTTTCCCTTGTGAAGAAGAGGACATCTGACATGACACTAGCCATCGGAGATGGTGCCAATGATGTATCAATGATTCAAATGGCTGATGTTGGAGTTGGTATAAGTGGACAAGAGGGTAGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGACAATTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCACTGGAATTATCAAAGGCTTGGTTACATGATACTATACAATTTCTACAGAAATGCAATCCTTGTTCTTGTCCTATTTTGGTATGTTCTCTACACTGCCTTCACTTCAACAACTGCAATAAATGAATGGAGCTCCACATTGTACTCAATAATCTACAGTGCACTACCAACTATTATTGTTGGAATTCTTGACAAAGATCTTAGTAGAAGCACTCTCCTAAAGTATCCTCAACTTTATAGTGCTGGACAAAGAGATGAAGCCTACAACAAGAAACTGTTTTTGTTAACAATGGTTGATACTTTGTGGCAAAGCATGGTTGTATTTTGGCCTCCACTCTTTGCATATTGGAAAAGCACTATTGATATAGCAAGCATAGGAGACCTTTGGACTCTTGCAGTGGTTATTTTGGTCAATTTACATTTGGCTATGGATGTTGTTAGATGGTATTGGGTGACTCATGCTGTCATTTGGGGATCTATTCTTGCTACATTCATTTCTGTCATGATCATTGATGCTATACCTCAACTTCCTGGCTACTGGGCCTTCTTTCATGTTTCAAGTACTGGACTGTTCTGGGCATTGTTGCTAGGAATTGTGATCACAGCATTGCTTCCACGTTTGGTTGTAAAATATATTTATCAATATTATTTTCCTAGTGATATTCAAATTTCTAGAGAAGCTGAAAAGATGAGAGAATATCAAAGAGTTGCTGAAAATGGTCAAATAGAAATGCTTCCTATCTCATATCATCAACCAAGATAA
Protein sequence

>Msa0393100

MDSKRPLLLQSPRTPNDQYIPTIPVFPELPKSKSSSSNTVTFSGVEFGQVENKNSSNSSSSSKSSMFIHSMGSSKRNNSVREMSSLNHSGSKSTVRYGSKGGGDSEGLTMSQRELRDEDARLVYINDPDKTNENFEFFGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRYVSILPLAFVLFVTGVKDAFEDWRRHNSDKVENNRLATILMNDGSFIEKKWKDIRVGEIVKIKTNETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETGSKVQPRYTGLIKCEKPNRNIYGFMANMEIDGKKLSLGSTNIVLRGCELKNTSWALGVAVYCGRETKAMLNNSGAPSKRSRLETRMNYEIIMLSFFLVALCTITSVCAAVWLKRHKDELNLLPYYRKLDFSKPEVEDYKYYGWGLEIFFTFLMSVIVYQVMIPIALYISMELVRVGQAYFMIEDDRLYDEATNTKFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIRGVDYSSTKTGMENELGDYSVQVDGKILKPKMKVKVSPELLQLARNGVENVEGKRIYDFFLALATCNTIVPIVVDTPDPDVKLLDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGQRLKFNVLGLHEFDSDRKRMSVILGYPDSSVKLFVKGADTTMFSVIDKSHNMDVIKATETHLHSYSSLGLRTLVIGMKELSTSEFEEWHAAYEAASTAVFGRAAMLKKISNHVESNVSILGASAIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGFSSKLLTRNMTQIIINSNSKVSCRKSLKDALERSRKLDAVATQIALIIDGGSLVHILDSEHEEELFQLASLCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAILVLVLFWYVLYTAFTSTTAINEWSSTLYSIIYSALPTIIVGILDKDLSRSTLLKYPQLYSAGQRDEAYNKKLFLLTMVDTLWQSMVVFWPPLFAYWKSTIDIASIGDLWTLAVVILVNLHLAMDVVRWYWVTHAVIWGSILATFISVMIIDAIPQLPGYWAFFHVSSTGLFWALLLGIVITALLPRLVVKYIYQYYFPSDIQISREAEKMREYQRVAENGQIEMLPISYHQPR*