Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380270 | RHN53256.1 | 96.411 | 418 | 11 | 3 | 1 | 415 | 64 | 480 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380270 | A0A396HJ24 | 96.411 | 418 | 11 | 3 | 1 | 415 | 64 | 480 | 0.0 | 816 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0084870 | Msa1380270 | 0.808970 | 2.383497e-50 | -8.615850e-47 |
| Msa0690930 | Msa1380270 | 0.810151 | 1.329273e-50 | -8.615850e-47 |
| Msa0711200 | Msa1380270 | 0.965899 | 3.312912e-125 | -8.615850e-47 |
| Msa0216740 | Msa1380270 | 0.815900 | 7.294673e-52 | -8.615850e-47 |
| Msa1026770 | Msa1380270 | 0.841867 | 3.662786e-58 | -8.615850e-47 |
| Msa1026800 | Msa1380270 | 0.841107 | 5.805921e-58 | -8.615850e-47 |
| Msa0295960 | Msa1380270 | 0.811477 | 6.867215e-51 | -8.615850e-47 |
| Msa0333950 | Msa1380270 | 0.810121 | 1.349362e-50 | -8.615850e-47 |
| Msa0334060 | Msa1380270 | 0.803922 | 2.765749e-49 | -8.615850e-47 |
| Msa1111770 | Msa1380270 | 0.839917 | 1.189298e-57 | -8.615850e-47 |
| Msa0510120 | Msa1380270 | 0.803409 | 3.534385e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380270 | MtrunA17_Chr5g0393941 | 96.411 | 418 | 11 | 3 | 1 | 415 | 64 | 480 | 0.0 | 816 |
| Msa1380270 | MtrunA17_Chr3g0140721 | 48.085 | 470 | 167 | 10 | 1 | 415 | 1 | 448 | 5.99e-133 | 389 |
| Msa1380270 | MtrunA17_Chr6g0487371 | 42.857 | 441 | 197 | 13 | 1 | 413 | 1 | 414 | 1.02e-104 | 316 |
| Msa1380270 | MtrunA17_Chr8g0337321 | 34.000 | 450 | 224 | 12 | 1 | 414 | 1 | 413 | 1.10e-72 | 233 |
| Msa1380270 | MtrunA17_Chr8g0389691 | 49.761 | 209 | 64 | 5 | 214 | 413 | 2 | 178 | 2.18e-53 | 176 |
| Msa1380270 | MtrunA17_Chr8g0389701 | 41.176 | 136 | 73 | 4 | 66 | 197 | 27 | 159 | 1.70e-27 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1380270 | AT3G19680.1 | 49.796 | 490 | 165 | 14 | 1 | 415 | 1 | 484 | 2.00e-129 | 382 |
| Msa1380270 | AT1G50040.1 | 51.852 | 459 | 171 | 13 | 1 | 415 | 1 | 453 | 1.54e-124 | 369 |
| Msa1380270 | AT1G10020.1 | 45.223 | 471 | 184 | 11 | 1 | 413 | 1 | 455 | 3.77e-120 | 357 |
| Msa1380270 | AT4G29310.1 | 43.624 | 447 | 186 | 12 | 1 | 413 | 1 | 415 | 2.82e-113 | 338 |
| Msa1380270 | AT4G29310.2 | 44.340 | 318 | 138 | 9 | 1 | 286 | 1 | 311 | 1.56e-82 | 256 |
| Msa1380270 | AT5G17640.1 | 38.269 | 439 | 213 | 14 | 1 | 403 | 1 | 417 | 2.43e-80 | 254 |
Find 113 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTTAGAGATTTGTGATTT+AGG | 0.171640 | tig0020341:-136620 | None:intergenic |
| CGTTAGAGATTTGTGATTTA+GGG | 0.208710 | tig0020341:-136619 | None:intergenic |
| CCAAACGGAAGCTGGGATTT+AGG | 0.337728 | tig0020341:+137358 | Msa1380270:CDS |
| TCCAACGGAGTTTGAGTAAC+CGG | 0.343106 | tig0020341:-137212 | None:intergenic |
| TCAAGACCCGGGTCTGGTTC+CGG | 0.366880 | tig0020341:+137394 | Msa1380270:CDS |
| CCCGGTTCAGTTTCCATCAA+TGG | 0.370037 | tig0020341:+136994 | Msa1380270:CDS |
| CTGCAACCGGCGAGTGTGAC+TGG | 0.377352 | tig0020341:-137268 | None:intergenic |
| ACCGGTTGCGTGTGCTTCAA+TGG | 0.380208 | tig0020341:+137060 | Msa1380270:CDS |
| TGGGATTTAGGCTCCGGTTC+AGG | 0.382445 | tig0020341:+137370 | Msa1380270:CDS |
| TCCTTCCCCTGGTTCACAAC+GGG | 0.385398 | tig0020341:+137096 | Msa1380270:CDS |
| TTTCCGGTTTGACGGTGAAC+CGG | 0.390430 | tig0020341:+136880 | Msa1380270:CDS |
| TCCATTGATGGAAACTGAAC+CGG | 0.392616 | tig0020341:-136995 | None:intergenic |
| AACCCGATGGTGATGGTACT+TGG | 0.396043 | tig0020341:+137155 | Msa1380270:CDS |
| AAAACCTGTGGACTGCATTC+CGG | 0.398056 | tig0020341:-136899 | None:intergenic |
| ATACCGGTTCGACGTTCTTC+CGG | 0.400080 | tig0020341:+137234 | Msa1380270:CDS |
| TCAAACCGGAAAATAAATCT+TGG | 0.401676 | tig0020341:-136869 | None:intergenic |
| CTTCCGTTTGGAGTGTTAAC+GGG | 0.405734 | tig0020341:-137346 | None:intergenic |
| AGCTGCTATGGATTTGAGTA+TGG | 0.413553 | tig0020341:+137570 | Msa1380270:CDS |
| CCAACCGTTGTGAAAAGAAC+AGG | 0.425210 | tig0020341:-136768 | None:intergenic |
| GCTTGAAGGATGAACTTTGC+CGG | 0.425992 | tig0020341:-136474 | None:intergenic |
| TGTTGCTCTTGCAGCTGCTA+TGG | 0.432619 | tig0020341:+137558 | Msa1380270:CDS |
| AGCACACGCAACCGGTGAAC+CGG | 0.433904 | tig0020341:-137053 | None:intergenic |
| CTGAATTTGCATGTGAAAAC+CGG | 0.437926 | tig0020341:-136947 | None:intergenic |
| ACACCCTTCGTTCCTTCCCC+TGG | 0.440544 | tig0020341:+137085 | Msa1380270:CDS |
| ACCATTGAAGCACACGCAAC+CGG | 0.440718 | tig0020341:-137061 | None:intergenic |
| GGAAACTGAACCGGGTTTGA+AGG | 0.444228 | tig0020341:-136986 | None:intergenic |
| TTTACAATTGATGTAGCATC+AGG | 0.444386 | tig0020341:+137316 | Msa1380270:CDS |
| TTTAACAGTCCGAGTTGAAC+CGG | 0.444551 | tig0020341:+136844 | Msa1380270:CDS |
| CCTAAATCCCAGCTTCCGTT+TGG | 0.449770 | tig0020341:-137358 | None:intergenic |
| GGAAGCTGGGATTTAGGCTC+CGG | 0.450272 | tig0020341:+137364 | Msa1380270:CDS |
| GCTTCCGTTTGGAGTGTTAA+CGG | 0.458009 | tig0020341:-137347 | None:intergenic |
| GTGATGTCCGCGAGATTTGA+CGG | 0.461060 | tig0020341:+137460 | Msa1380270:CDS |
| TTAACACTCCAAACGGAAGC+TGG | 0.465898 | tig0020341:+137350 | Msa1380270:CDS |
| TTCACACCAACTTCCACCTC+CGG | 0.469096 | tig0020341:-137502 | None:intergenic |
| CTGTGAACTGATACTGCAAC+CGG | 0.471720 | tig0020341:-137281 | None:intergenic |
| ATCTGGACCGGAACCAGACC+CGG | 0.472927 | tig0020341:-137401 | None:intergenic |
| CAGTAGCATGTGGAGCTTGA+AGG | 0.474576 | tig0020341:-136488 | None:intergenic |
| CCCGGGTCTTGATCCTGAAC+CGG | 0.475777 | tig0020341:-137383 | None:intergenic |
| TCATTCGTACGGATCTTAAT+CGG | 0.483307 | tig0020341:+136407 | Msa1380270:CDS |
| TTTCCATCAATGGATAGAAA+AGG | 0.487017 | tig0020341:+137004 | Msa1380270:CDS |
| TTACTGACCCGTTGTGAACC+AGG | 0.488538 | tig0020341:-137103 | None:intergenic |
| ATTACGATACACGATTTATC+CGG | 0.490765 | tig0020341:+137034 | Msa1380270:CDS |
| ATTCCGGTTCACCGTCAAAC+CGG | 0.493752 | tig0020341:-136883 | None:intergenic |
| CATGGGGTCGACTCGAAGCT+TGG | 0.495685 | tig0020341:+137182 | Msa1380270:CDS |
| CTCGAAGCTTGGCGTGAACC+CGG | 0.500118 | tig0020341:+137193 | Msa1380270:CDS |
| GTGACTGGATCAGCGGTGGC+CGG | 0.500258 | tig0020341:-137253 | None:intergenic |
| TTCCAAGTACCATCACCATC+GGG | 0.502674 | tig0020341:-137157 | None:intergenic |
| AGGATGAACTTTGCCGGAGA+AGG | 0.503747 | tig0020341:-136468 | None:intergenic |
| ACTCAAACTCCGTTGGATAC+CGG | 0.505974 | tig0020341:+137218 | Msa1380270:CDS |
| AAAGTGTAGTAAACCGGAGG+TGG | 0.509798 | tig0020341:+137489 | Msa1380270:CDS |
| TTCCTTCCCCTGGTTCACAA+CGG | 0.514660 | tig0020341:+137095 | Msa1380270:CDS |
| TTGATAATTAACCAAGCACC+TGG | 0.518437 | tig0020341:-137133 | None:intergenic |
| TCAGGATCAAGACCCGGGTC+TGG | 0.518778 | tig0020341:+137388 | Msa1380270:CDS |
| CAAACCGGAAAATAAATCTT+GGG | 0.524651 | tig0020341:-136868 | None:intergenic |
| CGGAAAATAAATCTTGGGTC+CGG | 0.524889 | tig0020341:-136863 | None:intergenic |
| CAAGGGAGAAGTAAAACAAC+CGG | 0.526470 | tig0020341:+136928 | Msa1380270:CDS |
| ACACGATTTATCCGGTTCAC+CGG | 0.530542 | tig0020341:+137042 | Msa1380270:CDS |
| TGGCCGGAAGAACGTCGAAC+CGG | 0.534116 | tig0020341:-137237 | None:intergenic |
| CCATTGATGGAAACTGAACC+GGG | 0.538501 | tig0020341:-136994 | None:intergenic |
| TCATCAAAACCATCCTTCTC+CGG | 0.538620 | tig0020341:+136455 | Msa1380270:CDS |
| GGAACTGTTGCGACGTGGCA+AGG | 0.541832 | tig0020341:-136542 | None:intergenic |
| CCCGGTTACTCAAACTCCGT+TGG | 0.543060 | tig0020341:+137211 | Msa1380270:CDS |
| TGCAGTATCAGTTCACAGAA+TGG | 0.545387 | tig0020341:+137286 | Msa1380270:CDS |
| GAAACTGAACCGGGTTTGAA+GGG | 0.547385 | tig0020341:-136985 | None:intergenic |
| TCCGGTTCAGGATCAAGACC+CGG | 0.549250 | tig0020341:+137382 | Msa1380270:CDS |
| GTAAATCAAACCCAGGTGCT+TGG | 0.549731 | tig0020341:+137122 | Msa1380270:CDS |
| GCAGTGTTGAAAACGCATGA+AGG | 0.556005 | tig0020341:-136689 | None:intergenic |
| AAGGTAGCAGCGAGAGAGTG+AGG | 0.557770 | tig0020341:-136590 | None:intergenic |
| AGTAAACCGGAGGTGGAAGT+TGG | 0.559317 | tig0020341:+137496 | Msa1380270:CDS |
| CCGGTTCAGGATCAAGACCC+GGG | 0.560244 | tig0020341:+137383 | Msa1380270:CDS |
| ACTCCCGTTAACACTCCAAA+CGG | 0.562154 | tig0020341:+137343 | Msa1380270:CDS |
| TGAACTTTGCCGGAGAAGGA+TGG | 0.563927 | tig0020341:-136464 | None:intergenic |
| CCCTTGACTTGGAAAACCTG+TGG | 0.564292 | tig0020341:-136911 | None:intergenic |
| TGGATCCGTGCTCATTCGTA+CGG | 0.564550 | tig0020341:+136396 | Msa1380270:CDS |
| CCAACGGAGTTTGAGTAACC+GGG | 0.565981 | tig0020341:-137211 | None:intergenic |
| TTTCCAAGTACCATCACCAT+CGG | 0.566391 | tig0020341:-137158 | None:intergenic |
| TACTGACCCGTTGTGAACCA+GGG | 0.567667 | tig0020341:-137102 | None:intergenic |
| TCAACTAACGTTAGATCAAG+AGG | 0.569554 | tig0020341:-136737 | None:intergenic |
| TAACACTCCAAACGGAAGCT+GGG | 0.572899 | tig0020341:+137351 | Msa1380270:CDS |
| TCTGGACCGGAACCAGACCC+GGG | 0.576297 | tig0020341:-137400 | None:intergenic |
| TGATGGTACTTGGAAACCAT+GGG | 0.577535 | tig0020341:+137165 | Msa1380270:CDS |
| CATCAATGGATAGAAAAGGT+TGG | 0.582790 | tig0020341:+137008 | Msa1380270:CDS |
| TTTGATTTCGCAGTAGCATG+TGG | 0.586946 | tig0020341:-136498 | None:intergenic |
| ATCTTGGGTCCGGTTCAACT+CGG | 0.588586 | tig0020341:-136853 | None:intergenic |
| GTGATGGTACTTGGAAACCA+TGG | 0.592053 | tig0020341:+137164 | Msa1380270:CDS |
| ACCCGTTGTGAACCAGGGGA+AGG | 0.596861 | tig0020341:-137097 | None:intergenic |
| ATTATCAAACCCGATGGTGA+TGG | 0.600303 | tig0020341:+137148 | Msa1380270:CDS |
| TTGTGATTTAGGGAAATCAA+AGG | 0.603406 | tig0020341:-136609 | None:intergenic |
| TGGTTAATTATCAAACCCGA+TGG | 0.611258 | tig0020341:+137142 | Msa1380270:CDS |
| TGAACCGGAATGCAGTCCAC+AGG | 0.623479 | tig0020341:+136895 | Msa1380270:CDS |
| TACTGCGAAATCAAACTCAA+AGG | 0.623956 | tig0020341:+136506 | Msa1380270:CDS |
| AGAAATTACGAAAAGAGTTG+CGG | 0.624516 | tig0020341:+137614 | Msa1380270:CDS |
| TGAACCAGGGGAAGGAACGA+AGG | 0.624619 | tig0020341:-137089 | None:intergenic |
| CAAGCTTCGAGTCGACCCCA+TGG | 0.631720 | tig0020341:-137181 | None:intergenic |
| AGGTAGCAGCGAGAGAGTGA+GGG | 0.638529 | tig0020341:-136589 | None:intergenic |
| GGCGAGTGTGACTGGATCAG+CGG | 0.640369 | tig0020341:-137260 | None:intergenic |
| GTTTCTGATTCTGATACTAG+AGG | 0.642324 | tig0020341:-136563 | None:intergenic |
| GAGTGTGACTGGATCAGCGG+TGG | 0.643291 | tig0020341:-137257 | None:intergenic |
| CTCACTCTCAACAACAACAA+CGG | 0.645230 | tig0020341:+136797 | Msa1380270:CDS |
| AACGTCGAACCGGTATCCAA+CGG | 0.651013 | tig0020341:-137227 | None:intergenic |
| TTCAACACTGCAAAACTCGT+AGG | 0.651845 | tig0020341:+136701 | Msa1380270:CDS |
| AAGATCCGTACGAATGAGCA+CGG | 0.652835 | tig0020341:-136401 | None:intergenic |
| CAACCGTTGTGAAAAGAACA+GGG | 0.658170 | tig0020341:-136767 | None:intergenic |
| GAACCAGGGGAAGGAACGAA+GGG | 0.658472 | tig0020341:-137088 | None:intergenic |
| GCTGATCCAGTCACACTCGC+CGG | 0.659941 | tig0020341:+137262 | Msa1380270:CDS |
| TGATAATTAACCAAGCACCT+GGG | 0.663225 | tig0020341:-137132 | None:intergenic |
| ACTGACCCGTTGTGAACCAG+GGG | 0.673424 | tig0020341:-137101 | None:intergenic |
| AGTATCAGTTCACAGAATGG+TGG | 0.683678 | tig0020341:+137289 | Msa1380270:CDS |
| CTAGAGGAACTGTTGCGACG+TGG | 0.686510 | tig0020341:-136547 | None:intergenic |
| CGGGTCAGTAAATCAAACCC+AGG | 0.691115 | tig0020341:+137115 | Msa1380270:CDS |
| ACTGTTGCGACGTGGCAAGG+TGG | 0.702049 | tig0020341:-136539 | None:intergenic |
| TGTGAAGCACGTGACATGCA+CGG | 0.711455 | tig0020341:+137519 | Msa1380270:CDS |
| GATGGTACTTGGAAACCATG+GGG | 0.759321 | tig0020341:+137166 | Msa1380270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTGTTAGTTTTGAAAA+CGG | - | tig0020341:136669-136688 | None:intergenic | 20.0% |
| !!! | ATTTGTGTTAGTTTTGAAAA+CGG | - | tig0020341:136669-136688 | None:intergenic | 20.0% |
| !! | TGAAAAAAAGTGTAGTAAAC+CGG | + | tig0020341:137483-137502 | Msa1380270:CDS | 25.0% |
| !! | TGAAAAAAAGTGTAGTAAAC+CGG | + | tig0020341:137483-137502 | Msa1380270:CDS | 25.0% |
| !! | ATGATGGTGATTTTATTGCA+AGG | - | tig0020341:136436-136455 | None:intergenic | 30.0% |
| TTGTGATTTAGGGAAATCAA+AGG | - | tig0020341:136612-136631 | None:intergenic | 30.0% | |
| CGTTAGAGATTTGTGATTTA+GGG | - | tig0020341:136622-136641 | None:intergenic | 30.0% | |
| ACGTTAGAGATTTGTGATTT+AGG | - | tig0020341:136623-136642 | None:intergenic | 30.0% | |
| AACAACAACGGAAAAAATAC+TGG | + | tig0020341:136809-136828 | Msa1380270:CDS | 30.0% | |
| CAAACCGGAAAATAAATCTT+GGG | - | tig0020341:136871-136890 | None:intergenic | 30.0% | |
| TCAAACCGGAAAATAAATCT+TGG | - | tig0020341:136872-136891 | None:intergenic | 30.0% | |
| !! | AGATTTATTTTCCGGTTTGA+CGG | + | tig0020341:136872-136891 | Msa1380270:CDS | 30.0% |
| TTTCCATCAATGGATAGAAA+AGG | + | tig0020341:137004-137023 | Msa1380270:CDS | 30.0% | |
| ATTACGATACACGATTTATC+CGG | + | tig0020341:137034-137053 | Msa1380270:CDS | 30.0% | |
| TTTACAATTGATGTAGCATC+AGG | + | tig0020341:137316-137335 | Msa1380270:CDS | 30.0% | |
| TGATTCTCCAATGAAAAATC+TGG | - | tig0020341:137421-137440 | None:intergenic | 30.0% | |
| ! | GAGAATCAGTTTTTGTATAG+CGG | + | tig0020341:137433-137452 | Msa1380270:CDS | 30.0% |
| AGAAATTACGAAAAGAGTTG+CGG | + | tig0020341:137614-137633 | Msa1380270:CDS | 30.0% | |
| !! | ATGATGGTGATTTTATTGCA+AGG | - | tig0020341:136436-136455 | None:intergenic | 30.0% |
| TTGTGATTTAGGGAAATCAA+AGG | - | tig0020341:136612-136631 | None:intergenic | 30.0% | |
| CGTTAGAGATTTGTGATTTA+GGG | - | tig0020341:136622-136641 | None:intergenic | 30.0% | |
| ACGTTAGAGATTTGTGATTT+AGG | - | tig0020341:136623-136642 | None:intergenic | 30.0% | |
| AACAACAACGGAAAAAATAC+TGG | + | tig0020341:136809-136828 | Msa1380270:CDS | 30.0% | |
| CAAACCGGAAAATAAATCTT+GGG | - | tig0020341:136871-136890 | None:intergenic | 30.0% | |
| TCAAACCGGAAAATAAATCT+TGG | - | tig0020341:136872-136891 | None:intergenic | 30.0% | |
| !! | AGATTTATTTTCCGGTTTGA+CGG | + | tig0020341:136872-136891 | Msa1380270:CDS | 30.0% |
| TTTCCATCAATGGATAGAAA+AGG | + | tig0020341:137004-137023 | Msa1380270:CDS | 30.0% | |
| ATTACGATACACGATTTATC+CGG | + | tig0020341:137034-137053 | Msa1380270:CDS | 30.0% | |
| TTTACAATTGATGTAGCATC+AGG | + | tig0020341:137316-137335 | Msa1380270:CDS | 30.0% | |
| TGATTCTCCAATGAAAAATC+TGG | - | tig0020341:137421-137440 | None:intergenic | 30.0% | |
| ! | GAGAATCAGTTTTTGTATAG+CGG | + | tig0020341:137433-137452 | Msa1380270:CDS | 30.0% |
| AGAAATTACGAAAAGAGTTG+CGG | + | tig0020341:137614-137633 | Msa1380270:CDS | 30.0% | |
| TCATTCGTACGGATCTTAAT+CGG | + | tig0020341:136407-136426 | Msa1380270:CDS | 35.0% | |
| !!! | AAGGATGGTTTTGATGATGA+TGG | - | tig0020341:136452-136471 | None:intergenic | 35.0% |
| TACTGCGAAATCAAACTCAA+AGG | + | tig0020341:136506-136525 | Msa1380270:CDS | 35.0% | |
| GTTTCTGATTCTGATACTAG+AGG | - | tig0020341:136566-136585 | None:intergenic | 35.0% | |
| !! | AAACGGAGATTTTGATGAGA+GGG | - | tig0020341:136652-136671 | None:intergenic | 35.0% |
| !! | AAAACGGAGATTTTGATGAG+AGG | - | tig0020341:136653-136672 | None:intergenic | 35.0% |
| TCAACTAACGTTAGATCAAG+AGG | - | tig0020341:136740-136759 | None:intergenic | 35.0% | |
| CTGAATTTGCATGTGAAAAC+CGG | - | tig0020341:136950-136969 | None:intergenic | 35.0% | |
| ! | CAACCTTTTCTATCCATTGA+TGG | - | tig0020341:137010-137029 | None:intergenic | 35.0% |
| CATCAATGGATAGAAAAGGT+TGG | + | tig0020341:137008-137027 | Msa1380270:CDS | 35.0% | |
| TGATAATTAACCAAGCACCT+GGG | - | tig0020341:137135-137154 | None:intergenic | 35.0% | |
| ! | TTGATAATTAACCAAGCACC+TGG | - | tig0020341:137136-137155 | None:intergenic | 35.0% |
| TGGTTAATTATCAAACCCGA+TGG | + | tig0020341:137142-137161 | Msa1380270:CDS | 35.0% | |
| ! | AAAAAAGTGTAGTAAACCGG+AGG | + | tig0020341:137486-137505 | Msa1380270:CDS | 35.0% |
| TCATTCGTACGGATCTTAAT+CGG | + | tig0020341:136407-136426 | Msa1380270:CDS | 35.0% | |
| !!! | AAGGATGGTTTTGATGATGA+TGG | - | tig0020341:136452-136471 | None:intergenic | 35.0% |
| TACTGCGAAATCAAACTCAA+AGG | + | tig0020341:136506-136525 | Msa1380270:CDS | 35.0% | |
| GTTTCTGATTCTGATACTAG+AGG | - | tig0020341:136566-136585 | None:intergenic | 35.0% | |
| !! | AAACGGAGATTTTGATGAGA+GGG | - | tig0020341:136652-136671 | None:intergenic | 35.0% |
| !! | AAAACGGAGATTTTGATGAG+AGG | - | tig0020341:136653-136672 | None:intergenic | 35.0% |
| TCAACTAACGTTAGATCAAG+AGG | - | tig0020341:136740-136759 | None:intergenic | 35.0% | |
| CTGAATTTGCATGTGAAAAC+CGG | - | tig0020341:136950-136969 | None:intergenic | 35.0% | |
| ! | CAACCTTTTCTATCCATTGA+TGG | - | tig0020341:137010-137029 | None:intergenic | 35.0% |
| CATCAATGGATAGAAAAGGT+TGG | + | tig0020341:137008-137027 | Msa1380270:CDS | 35.0% | |
| TGATAATTAACCAAGCACCT+GGG | - | tig0020341:137135-137154 | None:intergenic | 35.0% | |
| ! | TTGATAATTAACCAAGCACC+TGG | - | tig0020341:137136-137155 | None:intergenic | 35.0% |
| TGGTTAATTATCAAACCCGA+TGG | + | tig0020341:137142-137161 | Msa1380270:CDS | 35.0% | |
| ! | AAAAAAGTGTAGTAAACCGG+AGG | + | tig0020341:137486-137505 | Msa1380270:CDS | 35.0% |
| TCATCAAAACCATCCTTCTC+CGG | + | tig0020341:136455-136474 | Msa1380270:CDS | 40.0% | |
| ! | TTTGATTTCGCAGTAGCATG+TGG | - | tig0020341:136501-136520 | None:intergenic | 40.0% |
| TTCAACACTGCAAAACTCGT+AGG | + | tig0020341:136701-136720 | Msa1380270:CDS | 40.0% | |
| CAACCGTTGTGAAAAGAACA+GGG | - | tig0020341:136770-136789 | None:intergenic | 40.0% | |
| CTCACTCTCAACAACAACAA+CGG | + | tig0020341:136797-136816 | Msa1380270:CDS | 40.0% | |
| ! | TTTAACAGTCCGAGTTGAAC+CGG | + | tig0020341:136844-136863 | Msa1380270:CDS | 40.0% |
| CGGAAAATAAATCTTGGGTC+CGG | - | tig0020341:136866-136885 | None:intergenic | 40.0% | |
| !! | CGGACCCAAGATTTATTTTC+CGG | + | tig0020341:136864-136883 | Msa1380270:CDS | 40.0% |
| ! | GTTTTACTTCTCCCTTGACT+TGG | - | tig0020341:136925-136944 | None:intergenic | 40.0% |
| CAAGGGAGAAGTAAAACAAC+CGG | + | tig0020341:136928-136947 | Msa1380270:CDS | 40.0% | |
| AGACAAAAACCCTTCAAACC+CGG | + | tig0020341:136976-136995 | Msa1380270:CDS | 40.0% | |
| TCCATTGATGGAAACTGAAC+CGG | - | tig0020341:136998-137017 | None:intergenic | 40.0% | |
| ATTATCAAACCCGATGGTGA+TGG | + | tig0020341:137148-137167 | Msa1380270:CDS | 40.0% | |
| TTTCCAAGTACCATCACCAT+CGG | - | tig0020341:137161-137180 | None:intergenic | 40.0% | |
| TGATGGTACTTGGAAACCAT+GGG | + | tig0020341:137165-137184 | Msa1380270:CDS | 40.0% | |
| TGCAGTATCAGTTCACAGAA+TGG | + | tig0020341:137286-137305 | Msa1380270:CDS | 40.0% | |
| AGTATCAGTTCACAGAATGG+TGG | + | tig0020341:137289-137308 | Msa1380270:CDS | 40.0% | |
| ! | TTCCGGTCCAGATTTTTCAT+TGG | + | tig0020341:137411-137430 | Msa1380270:CDS | 40.0% |
| CTCCAATGAAAAATCTGGAC+CGG | - | tig0020341:137416-137435 | None:intergenic | 40.0% | |
| ! | TTTTTCACCGTCAAATCTCG+CGG | - | tig0020341:137470-137489 | None:intergenic | 40.0% |
| AGCTGCTATGGATTTGAGTA+TGG | + | tig0020341:137570-137589 | Msa1380270:CDS | 40.0% | |
| TCATCAAAACCATCCTTCTC+CGG | + | tig0020341:136455-136474 | Msa1380270:CDS | 40.0% | |
| ! | TTTGATTTCGCAGTAGCATG+TGG | - | tig0020341:136501-136520 | None:intergenic | 40.0% |
| TTCAACACTGCAAAACTCGT+AGG | + | tig0020341:136701-136720 | Msa1380270:CDS | 40.0% | |
| CAACCGTTGTGAAAAGAACA+GGG | - | tig0020341:136770-136789 | None:intergenic | 40.0% | |
| CTCACTCTCAACAACAACAA+CGG | + | tig0020341:136797-136816 | Msa1380270:CDS | 40.0% | |
| ! | TTTAACAGTCCGAGTTGAAC+CGG | + | tig0020341:136844-136863 | Msa1380270:CDS | 40.0% |
| CGGAAAATAAATCTTGGGTC+CGG | - | tig0020341:136866-136885 | None:intergenic | 40.0% | |
| !! | CGGACCCAAGATTTATTTTC+CGG | + | tig0020341:136864-136883 | Msa1380270:CDS | 40.0% |
| ! | GTTTTACTTCTCCCTTGACT+TGG | - | tig0020341:136925-136944 | None:intergenic | 40.0% |
| CAAGGGAGAAGTAAAACAAC+CGG | + | tig0020341:136928-136947 | Msa1380270:CDS | 40.0% | |
| AGACAAAAACCCTTCAAACC+CGG | + | tig0020341:136976-136995 | Msa1380270:CDS | 40.0% | |
| TCCATTGATGGAAACTGAAC+CGG | - | tig0020341:136998-137017 | None:intergenic | 40.0% | |
| ATTATCAAACCCGATGGTGA+TGG | + | tig0020341:137148-137167 | Msa1380270:CDS | 40.0% | |
| TTTCCAAGTACCATCACCAT+CGG | - | tig0020341:137161-137180 | None:intergenic | 40.0% | |
| TGATGGTACTTGGAAACCAT+GGG | + | tig0020341:137165-137184 | Msa1380270:CDS | 40.0% | |
| TGCAGTATCAGTTCACAGAA+TGG | + | tig0020341:137286-137305 | Msa1380270:CDS | 40.0% | |
| AGTATCAGTTCACAGAATGG+TGG | + | tig0020341:137289-137308 | Msa1380270:CDS | 40.0% | |
| ! | TTCCGGTCCAGATTTTTCAT+TGG | + | tig0020341:137411-137430 | Msa1380270:CDS | 40.0% |
| CTCCAATGAAAAATCTGGAC+CGG | - | tig0020341:137416-137435 | None:intergenic | 40.0% | |
| ! | TTTTTCACCGTCAAATCTCG+CGG | - | tig0020341:137470-137489 | None:intergenic | 40.0% |
| AGCTGCTATGGATTTGAGTA+TGG | + | tig0020341:137570-137589 | Msa1380270:CDS | 40.0% | |
| AAGATCCGTACGAATGAGCA+CGG | - | tig0020341:136404-136423 | None:intergenic | 45.0% | |
| GCTTGAAGGATGAACTTTGC+CGG | - | tig0020341:136477-136496 | None:intergenic | 45.0% | |
| ! | GCAGTGTTGAAAACGCATGA+AGG | - | tig0020341:136692-136711 | None:intergenic | 45.0% |
| ! | CGACCCTGTTCTTTTCACAA+CGG | + | tig0020341:136764-136783 | Msa1380270:CDS | 45.0% |
| CCAACCGTTGTGAAAAGAAC+AGG | - | tig0020341:136771-136790 | None:intergenic | 45.0% | |
| ! | CCTGTTCTTTTCACAACGGT+TGG | + | tig0020341:136768-136787 | Msa1380270:CDS | 45.0% |
| ! | AAAACCTGTGGACTGCATTC+CGG | - | tig0020341:136902-136921 | None:intergenic | 45.0% |
| ! | TCCACAGGTTTTCCAAGTCA+AGG | + | tig0020341:136910-136929 | Msa1380270:CDS | 45.0% |
| ! | CCACAGGTTTTCCAAGTCAA+GGG | + | tig0020341:136911-136930 | Msa1380270:CDS | 45.0% |
| GAAACTGAACCGGGTTTGAA+GGG | - | tig0020341:136988-137007 | None:intergenic | 45.0% | |
| CCATTGATGGAAACTGAACC+GGG | - | tig0020341:136997-137016 | None:intergenic | 45.0% | |
| ACACGATTTATCCGGTTCAC+CGG | + | tig0020341:137042-137061 | Msa1380270:CDS | 45.0% | |
| GTAAATCAAACCCAGGTGCT+TGG | + | tig0020341:137122-137141 | Msa1380270:CDS | 45.0% | |
| TTCCAAGTACCATCACCATC+GGG | - | tig0020341:137160-137179 | None:intergenic | 45.0% | |
| GTGATGGTACTTGGAAACCA+TGG | + | tig0020341:137164-137183 | Msa1380270:CDS | 45.0% | |
| GATGGTACTTGGAAACCATG+GGG | + | tig0020341:137166-137185 | Msa1380270:CDS | 45.0% | |
| TCCAACGGAGTTTGAGTAAC+CGG | - | tig0020341:137215-137234 | None:intergenic | 45.0% | |
| ACTCAAACTCCGTTGGATAC+CGG | + | tig0020341:137218-137237 | Msa1380270:CDS | 45.0% | |
| CTGTGAACTGATACTGCAAC+CGG | - | tig0020341:137284-137303 | None:intergenic | 45.0% | |
| ACTCCCGTTAACACTCCAAA+CGG | + | tig0020341:137343-137362 | Msa1380270:CDS | 45.0% | |
| ! | CTTCCGTTTGGAGTGTTAAC+GGG | - | tig0020341:137349-137368 | None:intergenic | 45.0% |
| ! | GCTTCCGTTTGGAGTGTTAA+CGG | - | tig0020341:137350-137369 | None:intergenic | 45.0% |
| TTAACACTCCAAACGGAAGC+TGG | + | tig0020341:137350-137369 | Msa1380270:CDS | 45.0% | |
| TAACACTCCAAACGGAAGCT+GGG | + | tig0020341:137351-137370 | Msa1380270:CDS | 45.0% | |
| AAAGTGTAGTAAACCGGAGG+TGG | + | tig0020341:137489-137508 | Msa1380270:CDS | 45.0% | |
| AAGATCCGTACGAATGAGCA+CGG | - | tig0020341:136404-136423 | None:intergenic | 45.0% | |
| GCTTGAAGGATGAACTTTGC+CGG | - | tig0020341:136477-136496 | None:intergenic | 45.0% | |
| ! | GCAGTGTTGAAAACGCATGA+AGG | - | tig0020341:136692-136711 | None:intergenic | 45.0% |
| ! | CGACCCTGTTCTTTTCACAA+CGG | + | tig0020341:136764-136783 | Msa1380270:CDS | 45.0% |
| CCAACCGTTGTGAAAAGAAC+AGG | - | tig0020341:136771-136790 | None:intergenic | 45.0% | |
| ! | CCTGTTCTTTTCACAACGGT+TGG | + | tig0020341:136768-136787 | Msa1380270:CDS | 45.0% |
| ! | AAAACCTGTGGACTGCATTC+CGG | - | tig0020341:136902-136921 | None:intergenic | 45.0% |
| ! | TCCACAGGTTTTCCAAGTCA+AGG | + | tig0020341:136910-136929 | Msa1380270:CDS | 45.0% |
| ! | CCACAGGTTTTCCAAGTCAA+GGG | + | tig0020341:136911-136930 | Msa1380270:CDS | 45.0% |
| GAAACTGAACCGGGTTTGAA+GGG | - | tig0020341:136988-137007 | None:intergenic | 45.0% | |
| CCATTGATGGAAACTGAACC+GGG | - | tig0020341:136997-137016 | None:intergenic | 45.0% | |
| ACACGATTTATCCGGTTCAC+CGG | + | tig0020341:137042-137061 | Msa1380270:CDS | 45.0% | |
| GTAAATCAAACCCAGGTGCT+TGG | + | tig0020341:137122-137141 | Msa1380270:CDS | 45.0% | |
| TTCCAAGTACCATCACCATC+GGG | - | tig0020341:137160-137179 | None:intergenic | 45.0% | |
| GTGATGGTACTTGGAAACCA+TGG | + | tig0020341:137164-137183 | Msa1380270:CDS | 45.0% | |
| GATGGTACTTGGAAACCATG+GGG | + | tig0020341:137166-137185 | Msa1380270:CDS | 45.0% | |
| TCCAACGGAGTTTGAGTAAC+CGG | - | tig0020341:137215-137234 | None:intergenic | 45.0% | |
| ACTCAAACTCCGTTGGATAC+CGG | + | tig0020341:137218-137237 | Msa1380270:CDS | 45.0% | |
| CTGTGAACTGATACTGCAAC+CGG | - | tig0020341:137284-137303 | None:intergenic | 45.0% | |
| ACTCCCGTTAACACTCCAAA+CGG | + | tig0020341:137343-137362 | Msa1380270:CDS | 45.0% | |
| ! | CTTCCGTTTGGAGTGTTAAC+GGG | - | tig0020341:137349-137368 | None:intergenic | 45.0% |
| ! | GCTTCCGTTTGGAGTGTTAA+CGG | - | tig0020341:137350-137369 | None:intergenic | 45.0% |
| TTAACACTCCAAACGGAAGC+TGG | + | tig0020341:137350-137369 | Msa1380270:CDS | 45.0% | |
| TAACACTCCAAACGGAAGCT+GGG | + | tig0020341:137351-137370 | Msa1380270:CDS | 45.0% | |
| AAAGTGTAGTAAACCGGAGG+TGG | + | tig0020341:137489-137508 | Msa1380270:CDS | 45.0% | |
| TGGATCCGTGCTCATTCGTA+CGG | + | tig0020341:136396-136415 | Msa1380270:CDS | 50.0% | |
| TGAACTTTGCCGGAGAAGGA+TGG | - | tig0020341:136467-136486 | None:intergenic | 50.0% | |
| AGGATGAACTTTGCCGGAGA+AGG | - | tig0020341:136471-136490 | None:intergenic | 50.0% | |
| CAGTAGCATGTGGAGCTTGA+AGG | - | tig0020341:136491-136510 | None:intergenic | 50.0% | |
| ATCTTGGGTCCGGTTCAACT+CGG | - | tig0020341:136856-136875 | None:intergenic | 50.0% | |
| ! | TTTCCGGTTTGACGGTGAAC+CGG | + | tig0020341:136880-136899 | Msa1380270:CDS | 50.0% |
| ATTCCGGTTCACCGTCAAAC+CGG | - | tig0020341:136886-136905 | None:intergenic | 50.0% | |
| !! | CCCTTGACTTGGAAAACCTG+TGG | - | tig0020341:136914-136933 | None:intergenic | 50.0% |
| GGAAACTGAACCGGGTTTGA+AGG | - | tig0020341:136989-137008 | None:intergenic | 50.0% | |
| CCCGGTTCAGTTTCCATCAA+TGG | + | tig0020341:136994-137013 | Msa1380270:CDS | 50.0% | |
| ACCATTGAAGCACACGCAAC+CGG | - | tig0020341:137064-137083 | None:intergenic | 50.0% | |
| TTCCTTCCCCTGGTTCACAA+CGG | + | tig0020341:137095-137114 | Msa1380270:CDS | 50.0% | |
| TACTGACCCGTTGTGAACCA+GGG | - | tig0020341:137105-137124 | None:intergenic | 50.0% | |
| TTACTGACCCGTTGTGAACC+AGG | - | tig0020341:137106-137125 | None:intergenic | 50.0% | |
| CGGGTCAGTAAATCAAACCC+AGG | + | tig0020341:137115-137134 | Msa1380270:CDS | 50.0% | |
| !! | AACCCGATGGTGATGGTACT+TGG | + | tig0020341:137155-137174 | Msa1380270:CDS | 50.0% |
| CCAACGGAGTTTGAGTAACC+GGG | - | tig0020341:137214-137233 | None:intergenic | 50.0% | |
| AACGTCGAACCGGTATCCAA+CGG | - | tig0020341:137230-137249 | None:intergenic | 50.0% | |
| !! | ATACCGGTTCGACGTTCTTC+CGG | + | tig0020341:137234-137253 | Msa1380270:CDS | 50.0% |
| CCTAAATCCCAGCTTCCGTT+TGG | - | tig0020341:137361-137380 | None:intergenic | 50.0% | |
| CCAAACGGAAGCTGGGATTT+AGG | + | tig0020341:137358-137377 | Msa1380270:CDS | 50.0% | |
| GTGATGTCCGCGAGATTTGA+CGG | + | tig0020341:137460-137479 | Msa1380270:CDS | 50.0% | |
| AGTAAACCGGAGGTGGAAGT+TGG | + | tig0020341:137496-137515 | Msa1380270:CDS | 50.0% | |
| TTCACACCAACTTCCACCTC+CGG | - | tig0020341:137505-137524 | None:intergenic | 50.0% | |
| TGTGAAGCACGTGACATGCA+CGG | + | tig0020341:137519-137538 | Msa1380270:CDS | 50.0% | |
| TGTTGCTCTTGCAGCTGCTA+TGG | + | tig0020341:137558-137577 | Msa1380270:CDS | 50.0% | |
| TGGATCCGTGCTCATTCGTA+CGG | + | tig0020341:136396-136415 | Msa1380270:CDS | 50.0% | |
| TGAACTTTGCCGGAGAAGGA+TGG | - | tig0020341:136467-136486 | None:intergenic | 50.0% | |
| AGGATGAACTTTGCCGGAGA+AGG | - | tig0020341:136471-136490 | None:intergenic | 50.0% | |
| CAGTAGCATGTGGAGCTTGA+AGG | - | tig0020341:136491-136510 | None:intergenic | 50.0% | |
| ATCTTGGGTCCGGTTCAACT+CGG | - | tig0020341:136856-136875 | None:intergenic | 50.0% | |
| ! | TTTCCGGTTTGACGGTGAAC+CGG | + | tig0020341:136880-136899 | Msa1380270:CDS | 50.0% |
| ATTCCGGTTCACCGTCAAAC+CGG | - | tig0020341:136886-136905 | None:intergenic | 50.0% | |
| !! | CCCTTGACTTGGAAAACCTG+TGG | - | tig0020341:136914-136933 | None:intergenic | 50.0% |
| GGAAACTGAACCGGGTTTGA+AGG | - | tig0020341:136989-137008 | None:intergenic | 50.0% | |
| CCCGGTTCAGTTTCCATCAA+TGG | + | tig0020341:136994-137013 | Msa1380270:CDS | 50.0% | |
| ACCATTGAAGCACACGCAAC+CGG | - | tig0020341:137064-137083 | None:intergenic | 50.0% | |
| TTCCTTCCCCTGGTTCACAA+CGG | + | tig0020341:137095-137114 | Msa1380270:CDS | 50.0% | |
| TACTGACCCGTTGTGAACCA+GGG | - | tig0020341:137105-137124 | None:intergenic | 50.0% | |
| TTACTGACCCGTTGTGAACC+AGG | - | tig0020341:137106-137125 | None:intergenic | 50.0% | |
| CGGGTCAGTAAATCAAACCC+AGG | + | tig0020341:137115-137134 | Msa1380270:CDS | 50.0% | |
| !! | AACCCGATGGTGATGGTACT+TGG | + | tig0020341:137155-137174 | Msa1380270:CDS | 50.0% |
| CCAACGGAGTTTGAGTAACC+GGG | - | tig0020341:137214-137233 | None:intergenic | 50.0% | |
| AACGTCGAACCGGTATCCAA+CGG | - | tig0020341:137230-137249 | None:intergenic | 50.0% | |
| !! | ATACCGGTTCGACGTTCTTC+CGG | + | tig0020341:137234-137253 | Msa1380270:CDS | 50.0% |
| CCTAAATCCCAGCTTCCGTT+TGG | - | tig0020341:137361-137380 | None:intergenic | 50.0% | |
| CCAAACGGAAGCTGGGATTT+AGG | + | tig0020341:137358-137377 | Msa1380270:CDS | 50.0% | |
| GTGATGTCCGCGAGATTTGA+CGG | + | tig0020341:137460-137479 | Msa1380270:CDS | 50.0% | |
| AGTAAACCGGAGGTGGAAGT+TGG | + | tig0020341:137496-137515 | Msa1380270:CDS | 50.0% | |
| TTCACACCAACTTCCACCTC+CGG | - | tig0020341:137505-137524 | None:intergenic | 50.0% | |
| TGTGAAGCACGTGACATGCA+CGG | + | tig0020341:137519-137538 | Msa1380270:CDS | 50.0% | |
| TGTTGCTCTTGCAGCTGCTA+TGG | + | tig0020341:137558-137577 | Msa1380270:CDS | 50.0% | |
| CTAGAGGAACTGTTGCGACG+TGG | - | tig0020341:136550-136569 | None:intergenic | 55.0% | |
| AGGTAGCAGCGAGAGAGTGA+GGG | - | tig0020341:136592-136611 | None:intergenic | 55.0% | |
| AAGGTAGCAGCGAGAGAGTG+AGG | - | tig0020341:136593-136612 | None:intergenic | 55.0% | |
| TGAACCGGAATGCAGTCCAC+AGG | + | tig0020341:136895-136914 | Msa1380270:CDS | 55.0% | |
| ACCGGTTGCGTGTGCTTCAA+TGG | + | tig0020341:137060-137079 | Msa1380270:CDS | 55.0% | |
| GAACCAGGGGAAGGAACGAA+GGG | - | tig0020341:137091-137110 | None:intergenic | 55.0% | |
| TGAACCAGGGGAAGGAACGA+AGG | - | tig0020341:137092-137111 | None:intergenic | 55.0% | |
| TCCTTCCCCTGGTTCACAAC+GGG | + | tig0020341:137096-137115 | Msa1380270:CDS | 55.0% | |
| ACTGACCCGTTGTGAACCAG+GGG | - | tig0020341:137104-137123 | None:intergenic | 55.0% | |
| CCCGGTTACTCAAACTCCGT+TGG | + | tig0020341:137211-137230 | Msa1380270:CDS | 55.0% | |
| GGAAGCTGGGATTTAGGCTC+CGG | + | tig0020341:137364-137383 | Msa1380270:CDS | 55.0% | |
| TGGGATTTAGGCTCCGGTTC+AGG | + | tig0020341:137370-137389 | Msa1380270:CDS | 55.0% | |
| TCCGGTTCAGGATCAAGACC+CGG | + | tig0020341:137382-137401 | Msa1380270:CDS | 55.0% | |
| CTAGAGGAACTGTTGCGACG+TGG | - | tig0020341:136550-136569 | None:intergenic | 55.0% | |
| AGGTAGCAGCGAGAGAGTGA+GGG | - | tig0020341:136592-136611 | None:intergenic | 55.0% | |
| AAGGTAGCAGCGAGAGAGTG+AGG | - | tig0020341:136593-136612 | None:intergenic | 55.0% | |
| TGAACCGGAATGCAGTCCAC+AGG | + | tig0020341:136895-136914 | Msa1380270:CDS | 55.0% | |
| ACCGGTTGCGTGTGCTTCAA+TGG | + | tig0020341:137060-137079 | Msa1380270:CDS | 55.0% | |
| GAACCAGGGGAAGGAACGAA+GGG | - | tig0020341:137091-137110 | None:intergenic | 55.0% | |
| TGAACCAGGGGAAGGAACGA+AGG | - | tig0020341:137092-137111 | None:intergenic | 55.0% | |
| TCCTTCCCCTGGTTCACAAC+GGG | + | tig0020341:137096-137115 | Msa1380270:CDS | 55.0% | |
| ACTGACCCGTTGTGAACCAG+GGG | - | tig0020341:137104-137123 | None:intergenic | 55.0% | |
| CCCGGTTACTCAAACTCCGT+TGG | + | tig0020341:137211-137230 | Msa1380270:CDS | 55.0% | |
| GGAAGCTGGGATTTAGGCTC+CGG | + | tig0020341:137364-137383 | Msa1380270:CDS | 55.0% | |
| TGGGATTTAGGCTCCGGTTC+AGG | + | tig0020341:137370-137389 | Msa1380270:CDS | 55.0% | |
| TCCGGTTCAGGATCAAGACC+CGG | + | tig0020341:137382-137401 | Msa1380270:CDS | 55.0% | |
| ACTGTTGCGACGTGGCAAGG+TGG | - | tig0020341:136542-136561 | None:intergenic | 60.0% | |
| GGAACTGTTGCGACGTGGCA+AGG | - | tig0020341:136545-136564 | None:intergenic | 60.0% | |
| AGCACACGCAACCGGTGAAC+CGG | - | tig0020341:137056-137075 | None:intergenic | 60.0% | |
| ACACCCTTCGTTCCTTCCCC+TGG | + | tig0020341:137085-137104 | Msa1380270:CDS | 60.0% | |
| ACCCGTTGTGAACCAGGGGA+AGG | - | tig0020341:137100-137119 | None:intergenic | 60.0% | |
| CAAGCTTCGAGTCGACCCCA+TGG | - | tig0020341:137184-137203 | None:intergenic | 60.0% | |
| !! | CATGGGGTCGACTCGAAGCT+TGG | + | tig0020341:137182-137201 | Msa1380270:CDS | 60.0% |
| CTCGAAGCTTGGCGTGAACC+CGG | + | tig0020341:137193-137212 | Msa1380270:CDS | 60.0% | |
| TGGCCGGAAGAACGTCGAAC+CGG | - | tig0020341:137240-137259 | None:intergenic | 60.0% | |
| GAGTGTGACTGGATCAGCGG+TGG | - | tig0020341:137260-137279 | None:intergenic | 60.0% | |
| GGCGAGTGTGACTGGATCAG+CGG | - | tig0020341:137263-137282 | None:intergenic | 60.0% | |
| GCTGATCCAGTCACACTCGC+CGG | + | tig0020341:137262-137281 | Msa1380270:CDS | 60.0% | |
| CCCGGGTCTTGATCCTGAAC+CGG | - | tig0020341:137386-137405 | None:intergenic | 60.0% | |
| CCGGTTCAGGATCAAGACCC+GGG | + | tig0020341:137383-137402 | Msa1380270:CDS | 60.0% | |
| TCAGGATCAAGACCCGGGTC+TGG | + | tig0020341:137388-137407 | Msa1380270:CDS | 60.0% | |
| ! | TCAAGACCCGGGTCTGGTTC+CGG | + | tig0020341:137394-137413 | Msa1380270:CDS | 60.0% |
| ATCTGGACCGGAACCAGACC+CGG | - | tig0020341:137404-137423 | None:intergenic | 60.0% | |
| ACTGTTGCGACGTGGCAAGG+TGG | - | tig0020341:136542-136561 | None:intergenic | 60.0% | |
| GGAACTGTTGCGACGTGGCA+AGG | - | tig0020341:136545-136564 | None:intergenic | 60.0% | |
| AGCACACGCAACCGGTGAAC+CGG | - | tig0020341:137056-137075 | None:intergenic | 60.0% | |
| ACACCCTTCGTTCCTTCCCC+TGG | + | tig0020341:137085-137104 | Msa1380270:CDS | 60.0% | |
| ACCCGTTGTGAACCAGGGGA+AGG | - | tig0020341:137100-137119 | None:intergenic | 60.0% | |
| CAAGCTTCGAGTCGACCCCA+TGG | - | tig0020341:137184-137203 | None:intergenic | 60.0% | |
| !! | CATGGGGTCGACTCGAAGCT+TGG | + | tig0020341:137182-137201 | Msa1380270:CDS | 60.0% |
| CTCGAAGCTTGGCGTGAACC+CGG | + | tig0020341:137193-137212 | Msa1380270:CDS | 60.0% | |
| TGGCCGGAAGAACGTCGAAC+CGG | - | tig0020341:137240-137259 | None:intergenic | 60.0% | |
| GAGTGTGACTGGATCAGCGG+TGG | - | tig0020341:137260-137279 | None:intergenic | 60.0% | |
| GGCGAGTGTGACTGGATCAG+CGG | - | tig0020341:137263-137282 | None:intergenic | 60.0% | |
| GCTGATCCAGTCACACTCGC+CGG | + | tig0020341:137262-137281 | Msa1380270:CDS | 60.0% | |
| CCCGGGTCTTGATCCTGAAC+CGG | - | tig0020341:137386-137405 | None:intergenic | 60.0% | |
| CCGGTTCAGGATCAAGACCC+GGG | + | tig0020341:137383-137402 | Msa1380270:CDS | 60.0% | |
| TCAGGATCAAGACCCGGGTC+TGG | + | tig0020341:137388-137407 | Msa1380270:CDS | 60.0% | |
| ! | TCAAGACCCGGGTCTGGTTC+CGG | + | tig0020341:137394-137413 | Msa1380270:CDS | 60.0% |
| ATCTGGACCGGAACCAGACC+CGG | - | tig0020341:137404-137423 | None:intergenic | 60.0% | |
| GTGACTGGATCAGCGGTGGC+CGG | - | tig0020341:137256-137275 | None:intergenic | 65.0% | |
| CTGCAACCGGCGAGTGTGAC+TGG | - | tig0020341:137271-137290 | None:intergenic | 65.0% | |
| TCTGGACCGGAACCAGACCC+GGG | - | tig0020341:137403-137422 | None:intergenic | 65.0% | |
| GTGACTGGATCAGCGGTGGC+CGG | - | tig0020341:137256-137275 | None:intergenic | 65.0% | |
| CTGCAACCGGCGAGTGTGAC+TGG | - | tig0020341:137271-137290 | None:intergenic | 65.0% | |
| TCTGGACCGGAACCAGACCC+GGG | - | tig0020341:137403-137422 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020341 | gene | 136395 | 137642 | 136395 | ID=Msa1380270;Name=Msa1380270 |
| tig0020341 | mRNA | 136395 | 137642 | 136395 | ID=Msa1380270-mRNA-1;Parent=Msa1380270;Name=Msa1380270-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|415 |
| tig0020341 | exon | 136395 | 137642 | 136395 | ID=Msa1380270-mRNA-1:exon:6983;Parent=Msa1380270-mRNA-1 |
| tig0020341 | CDS | 136395 | 137642 | 136395 | ID=Msa1380270-mRNA-1:cds;Parent=Msa1380270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
